BLASTX nr result
ID: Cocculus23_contig00018628
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00018628
(273 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007209127.1| hypothetical protein PRUPE_ppa005529mg [Prun... 60 3e-12
ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|... 66 5e-12
ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V... 59 6e-12
emb|CBI34473.3| unnamed protein product [Vitis vinifera] 59 6e-12
gb|EXB66081.1| DNA primase small subunit [Morus notabilis] 58 1e-11
ref|XP_006439363.1| hypothetical protein CICLE_v10020115mg [Citr... 54 1e-10
ref|XP_006439362.1| hypothetical protein CICLE_v10020115mg [Citr... 54 1e-10
ref|XP_006655230.1| PREDICTED: DNA primase small subunit-like [O... 56 1e-10
ref|XP_006837445.1| hypothetical protein AMTR_s00107p00093080 [A... 56 2e-10
ref|XP_004300869.1| PREDICTED: DNA primase small subunit-like [F... 61 2e-10
ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [C... 55 3e-10
ref|XP_006476395.1| PREDICTED: DNA primase small subunit-like [C... 51 5e-10
ref|XP_002303474.2| hypothetical protein POPTR_0003s10380g [Popu... 59 5e-10
ref|XP_004981874.1| PREDICTED: DNA primase small subunit-like [S... 54 9e-10
ref|NP_001174383.1| Os05g0358200 [Oryza sativa Japonica Group] g... 54 1e-09
gb|EMS59221.1| DNA primase small subunit [Triticum urartu] 57 1e-09
ref|XP_007040498.1| DNA primase isoform 1 [Theobroma cacao] gi|5... 56 3e-09
ref|XP_007040499.1| DNA primase isoform 2 [Theobroma cacao] gi|5... 56 3e-09
gb|EYU23368.1| hypothetical protein MIMGU_mgv1a0062361mg, partia... 56 3e-09
ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [B... 52 7e-09
>ref|XP_007209127.1| hypothetical protein PRUPE_ppa005529mg [Prunus persica]
gi|462404862|gb|EMJ10326.1| hypothetical protein
PRUPE_ppa005529mg [Prunus persica]
Length = 456
Score = 60.5 bits (145), Expect(2) = 3e-12
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP+ CEEFDPTAVPTLS LL+ LN+GG A+ +N
Sbjct: 372 CVPIDPNRCEEFDPTAVPTLSNLLEQLNIGGLRAEVDN 409
Score = 36.6 bits (83), Expect(2) = 3e-12
Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
W+ TSLGKS+RFFR SFLQPL
Sbjct: 411 WDRTSLGKSIRFFRSSFLQPL 431
>ref|XP_002515859.1| DNA primase, putative [Ricinus communis]
gi|223545014|gb|EEF46528.1| DNA primase, putative
[Ricinus communis]
Length = 515
Score = 66.2 bits (160), Expect(2) = 5e-12
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP HC+EFDPTAVPTLS LL+ LNMGGP A +N
Sbjct: 361 CVPIDPKHCDEFDPTAVPTLSQLLKELNMGGPRASDDN 398
Score = 30.0 bits (66), Expect(2) = 5e-12
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = -3
Query: 58 ESTSLGKSVRFFR-SFLQPL 2
+ TSLGKS+ FFR SFLQPL
Sbjct: 401 DRTSLGKSISFFRSSFLQPL 420
>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
Length = 457
Score = 58.9 bits (141), Expect(2) = 6e-12
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP CEEFDPT+VPTLS LL+ LNMGG AD ++
Sbjct: 373 CVPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADD 410
Score = 37.0 bits (84), Expect(2) = 6e-12
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSLGKSV+FFR SFLQPL
Sbjct: 412 WERTSLGKSVKFFRLSFLQPL 432
>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 58.9 bits (141), Expect(2) = 6e-12
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP CEEFDPT+VPTLS LL+ LNMGG AD ++
Sbjct: 363 CVPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADD 400
Score = 37.0 bits (84), Expect(2) = 6e-12
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSLGKSV+FFR SFLQPL
Sbjct: 402 WERTSLGKSVKFFRLSFLQPL 422
>gb|EXB66081.1| DNA primase small subunit [Morus notabilis]
Length = 502
Score = 57.8 bits (138), Expect(2) = 1e-11
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP CEEFDPT VPTLS LLQ LNM G ++ EN
Sbjct: 418 CVPIDPKKCEEFDPTTVPTLSKLLQELNMEGAKSEVEN 455
Score = 37.0 bits (84), Expect(2) = 1e-11
Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
W+ TSLGKS+RFFR SFLQPL
Sbjct: 457 WDKTSLGKSIRFFRTSFLQPL 477
>ref|XP_006439363.1| hypothetical protein CICLE_v10020115mg [Citrus clementina]
gi|557541625|gb|ESR52603.1| hypothetical protein
CICLE_v10020115mg [Citrus clementina]
Length = 451
Score = 53.5 bits (127), Expect(2) = 1e-10
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
C+PIDP CEEFDPT VPTLS LL+ LN G D +N
Sbjct: 367 CIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDN 404
Score = 38.1 bits (87), Expect(2) = 1e-10
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSLGKS+RFFR SFLQPL
Sbjct: 406 WEKTSLGKSIRFFRSSFLQPL 426
>ref|XP_006439362.1| hypothetical protein CICLE_v10020115mg [Citrus clementina]
gi|557541624|gb|ESR52602.1| hypothetical protein
CICLE_v10020115mg [Citrus clementina]
Length = 434
Score = 53.5 bits (127), Expect(2) = 1e-10
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
C+PIDP CEEFDPT VPTLS LL+ LN G D +N
Sbjct: 350 CIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDN 387
Score = 38.1 bits (87), Expect(2) = 1e-10
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSLGKS+RFFR SFLQPL
Sbjct: 389 WEKTSLGKSIRFFRSSFLQPL 409
>ref|XP_006655230.1| PREDICTED: DNA primase small subunit-like [Oryza brachyantha]
Length = 453
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDPD+C++FDPT VPTLS LL LN G D EN
Sbjct: 369 CVPIDPDNCDDFDPTTVPTLSQLLGELNAAGHHTDSEN 406
Score = 35.0 bits (79), Expect(2) = 1e-10
Identities = 18/21 (85%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSL KSVRFFR SFLQPL
Sbjct: 408 WERTSLEKSVRFFRASFLQPL 428
>ref|XP_006837445.1| hypothetical protein AMTR_s00107p00093080 [Amborella trichopoda]
gi|548840086|gb|ERN00299.1| hypothetical protein
AMTR_s00107p00093080 [Amborella trichopoda]
Length = 455
Score = 55.8 bits (133), Expect(2) = 2e-10
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGG 180
CVPIDP+HCE+FDPT+VP+L+ LL+ LNM G
Sbjct: 371 CVPIDPEHCEDFDPTSVPSLAELLEELNMAG 401
Score = 35.0 bits (79), Expect(2) = 2e-10
Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = -3
Query: 64 GWESTSLGKSVRFFR-SFLQPL 2
GWE TSL KSV FF+ SFLQPL
Sbjct: 408 GWEGTSLAKSVSFFKSSFLQPL 429
>ref|XP_004300869.1| PREDICTED: DNA primase small subunit-like [Fragaria vesca subsp.
vesca]
Length = 452
Score = 60.8 bits (146), Expect(2) = 2e-10
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP+ CEEFDPTAVPTLSTL++ LN GG A+ +N
Sbjct: 362 CVPIDPNRCEEFDPTAVPTLSTLIEELNNGGLRAEADN 399
Score = 29.6 bits (65), Expect(2) = 2e-10
Identities = 14/20 (70%), Positives = 18/20 (90%), Gaps = 1/20 (5%)
Frame = -3
Query: 58 ESTSLGKSVRFFR-SFLQPL 2
+ TSLGKS+RFF+ SFL+PL
Sbjct: 402 DRTSLGKSIRFFQSSFLEPL 421
>ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase
small subunit-like [Cucumis sativus]
Length = 450
Score = 55.1 bits (131), Expect(2) = 3e-10
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP+HC+EFDPT VPT++ LL+ LN D EN
Sbjct: 366 CVPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSEN 403
Score = 35.0 bits (79), Expect(2) = 3e-10
Identities = 16/21 (76%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFRS-FLQPL 2
W+ TSLG+S+RFFRS FLQPL
Sbjct: 405 WDRTSLGESIRFFRSAFLQPL 425
>ref|XP_006476395.1| PREDICTED: DNA primase small subunit-like [Citrus sinensis]
Length = 451
Score = 51.2 bits (121), Expect(2) = 5e-10
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
C+PIDP CEE DPT VPTLS LL+ LN G D +N
Sbjct: 367 CIPIDPKDCEELDPTTVPTLSELLRELNTGDSRMDVDN 404
Score = 38.1 bits (87), Expect(2) = 5e-10
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSLGKS+RFFR SFLQPL
Sbjct: 406 WEKTSLGKSIRFFRSSFLQPL 426
>ref|XP_002303474.2| hypothetical protein POPTR_0003s10380g [Populus trichocarpa]
gi|550342901|gb|EEE78453.2| hypothetical protein
POPTR_0003s10380g [Populus trichocarpa]
Length = 450
Score = 58.5 bits (140), Expect(2) = 5e-10
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP+HC+EFDPT VPTLS L + L +GG A+ EN
Sbjct: 366 CVPIDPNHCDEFDPTTVPTLSQLFEELYIGGTRAEDEN 403
Score = 30.8 bits (68), Expect(2) = 5e-10
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
W+ TSLG+ + FFR SFLQPL
Sbjct: 405 WDRTSLGQPISFFRSSFLQPL 425
>ref|XP_004981874.1| PREDICTED: DNA primase small subunit-like [Setaria italica]
Length = 453
Score = 53.9 bits (128), Expect(2) = 9e-10
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP++CE+FDPTAVPTLS LL LN D EN
Sbjct: 369 CVPIDPNNCEDFDPTAVPTLSQLLGELNAASFQTDSEN 406
Score = 34.7 bits (78), Expect(2) = 9e-10
Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSL KS+RFFR SFLQPL
Sbjct: 408 WERTSLEKSIRFFRTSFLQPL 428
>ref|NP_001174383.1| Os05g0358200 [Oryza sativa Japonica Group]
gi|255676295|dbj|BAH93111.1| Os05g0358200, partial
[Oryza sativa Japonica Group]
Length = 92
Score = 53.9 bits (128), Expect(2) = 1e-09
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP++C++FDPT VPTLS LL LN G D EN
Sbjct: 8 CVPIDPNNCDDFDPTTVPTLSQLLGELNAAGLRTDSEN 45
Score = 34.7 bits (78), Expect(2) = 1e-09
Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSL KS+RFFR SFLQPL
Sbjct: 47 WERTSLEKSIRFFRASFLQPL 67
>gb|EMS59221.1| DNA primase small subunit [Triticum urartu]
Length = 417
Score = 56.6 bits (135), Expect(2) = 1e-09
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP++CE+FDPTAVPTLS LL LN G D EN
Sbjct: 333 CVPIDPNNCEDFDPTAVPTLSQLLGELNAAGMQIDSEN 370
Score = 31.6 bits (70), Expect(2) = 1e-09
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSL K +RFFR SFLQP+
Sbjct: 372 WERTSLEKYIRFFRTSFLQPM 392
>ref|XP_007040498.1| DNA primase isoform 1 [Theobroma cacao] gi|508777743|gb|EOY24999.1|
DNA primase isoform 1 [Theobroma cacao]
Length = 452
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP++C+EFDPT VPTLS LL+ LN GG D E+
Sbjct: 368 CVPIDPNNCDEFDPTKVPTLSQLLEELNRGGLRQDAED 405
Score = 31.2 bits (69), Expect(2) = 3e-09
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
W+ TSLG+SV FFR SFL PL
Sbjct: 407 WDRTSLGESVTFFRSSFLHPL 427
>ref|XP_007040499.1| DNA primase isoform 2 [Theobroma cacao] gi|508777744|gb|EOY25000.1|
DNA primase isoform 2 [Theobroma cacao]
Length = 451
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP++C+EFDPT VPTLS LL+ LN GG D E+
Sbjct: 367 CVPIDPNNCDEFDPTKVPTLSQLLEELNRGGLRQDAED 404
Score = 31.2 bits (69), Expect(2) = 3e-09
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
W+ TSLG+SV FFR SFL PL
Sbjct: 406 WDRTSLGESVTFFRSSFLHPL 426
>gb|EYU23368.1| hypothetical protein MIMGU_mgv1a0062361mg, partial [Mimulus
guttatus]
Length = 272
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 26/39 (66%), Positives = 29/39 (74%), Gaps = 2/39 (5%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMG--GPIADHE 162
CVPIDP+ CE+FDP VPTLS LL+ LNMG GP D E
Sbjct: 188 CVPIDPEQCEQFDPLTVPTLSKLLEELNMGALGPPGDEE 226
Score = 31.2 bits (69), Expect(2) = 3e-09
Identities = 15/20 (75%), Positives = 18/20 (90%), Gaps = 1/20 (5%)
Frame = -3
Query: 58 ESTSLGKSVRFFR-SFLQPL 2
E+TSLGKS++FFR SFL PL
Sbjct: 228 ENTSLGKSIKFFRSSFLHPL 247
>ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [Brachypodium distachyon]
Length = 450
Score = 51.6 bits (122), Expect(2) = 7e-09
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2
Query: 272 CVPIDPDHCEEFDPTAVPTLSTLLQGLNMGGPIADHEN 159
CVPIDP++C++FDP AVPTLS LL LN G D E+
Sbjct: 366 CVPIDPNNCDDFDPAAVPTLSQLLGELNAAGMQIDSES 403
Score = 33.9 bits (76), Expect(2) = 7e-09
Identities = 16/21 (76%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = -3
Query: 61 WESTSLGKSVRFFR-SFLQPL 2
WE TSL KS+RFFR SFLQP+
Sbjct: 405 WERTSLEKSIRFFRTSFLQPM 425