BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00018613
         (215 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007162917.1| hypothetical protein PHAVU_001G191200g [Phas...    63   5e-08
ref|XP_006430176.1| hypothetical protein CICLE_v10011285mg [Citr...    62   8e-08
ref|XP_007027779.1| Chloroplast signal recognition particle 54 k...    62   8e-08
ref|XP_004246504.1| PREDICTED: signal recognition particle 54 kD...    62   8e-08
ref|XP_004246503.1| PREDICTED: signal recognition particle 54 kD...    62   8e-08
ref|XP_006341101.1| PREDICTED: signal recognition particle 54 kD...    60   2e-07
ref|XP_006481752.1| PREDICTED: signal recognition particle 54 kD...    60   3e-07
ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD...    60   3e-07
ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kD...    60   4e-07
ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kD...    60   4e-07
ref|XP_002530328.1| signal recognition particle protein, putativ...    60   4e-07
ref|XP_004494200.1| PREDICTED: signal recognition particle 54 kD...    58   1e-06
ref|XP_006398854.1| hypothetical protein EUTSA_v10013128mg [Eutr...    57   3e-06
ref|XP_006398853.1| hypothetical protein EUTSA_v10013128mg [Eutr...    57   3e-06
ref|NP_196014.1| chloroplast signal recognition particle 54 [Ara...    56   5e-06
ref|XP_006381979.1| hypothetical protein POPTR_0006s22810g [Popu...    56   5e-06
ref|XP_006290048.1| hypothetical protein CARUB_v10003682mg [Caps...    56   5e-06
gb|AAC64139.1| signal recognition particle 54 kDa subunit precur...    56   5e-06
ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arab...    56   5e-06
gb|EYU38645.1| hypothetical protein MIMGU_mgv1a003692mg [Mimulus...    56   6e-06

>ref|XP_007162917.1| hypothetical protein PHAVU_001G191200g [Phaseolus vulgaris]
           gi|561036381|gb|ESW34911.1| hypothetical protein
           PHAVU_001G191200g [Phaseolus vulgaris]
          Length = 593

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/48 (68%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAKT 73
           LSNLEEALK+++KAPPGTA    R ESR  FV+STS RP PRGFG+K+
Sbjct: 546 LSNLEEALKADEKAPPGTARRRKRSESRSVFVDSTSGRPAPRGFGSKS 593


>ref|XP_006430176.1| hypothetical protein CICLE_v10011285mg [Citrus clementina]
           gi|557532233|gb|ESR43416.1| hypothetical protein
           CICLE_v10011285mg [Citrus clementina]
          Length = 630

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFG 82
           LSNLE+ALKSEQKAPPGTA    R ESR+ FV+S S RP+PRGFG
Sbjct: 583 LSNLEDALKSEQKAPPGTARRKRRSESRRQFVDSASTRPSPRGFG 627


>ref|XP_007027779.1| Chloroplast signal recognition particle 54 kDa subunit [Theobroma
           cacao] gi|508716384|gb|EOY08281.1| Chloroplast signal
           recognition particle 54 kDa subunit [Theobroma cacao]
          Length = 571

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAK 76
           LSNLE+A+K+EQKAPPGTA    R ESR+ F +S S RP+PRGFGAK
Sbjct: 524 LSNLEDAMKAEQKAPPGTARRKRRSESRRQFADSASTRPSPRGFGAK 570


>ref|XP_004246504.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like isoform 2 [Solanum lycopersicum]
          Length = 541

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/47 (72%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAK 76
           LSNLEEALKSEQ+APPGTA    R E RK F +S S RP+PRGFGAK
Sbjct: 494 LSNLEEALKSEQQAPPGTARRKRRSEPRKQFADSGSARPSPRGFGAK 540


>ref|XP_004246503.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like isoform 1 [Solanum lycopersicum]
          Length = 567

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/47 (72%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAK 76
           LSNLEEALKSEQ+APPGTA    R E RK F +S S RP+PRGFGAK
Sbjct: 520 LSNLEEALKSEQQAPPGTARRKRRSEPRKQFADSGSARPSPRGFGAK 566


>ref|XP_006341101.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Solanum tuberosum]
          Length = 569

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAK 76
           LSNLEEALKSEQ+APPGTA    R E RK F +S S RP+PRGFG K
Sbjct: 522 LSNLEEALKSEQQAPPGTARRKRRSEPRKQFADSGSARPSPRGFGGK 568


>ref|XP_006481752.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Citrus sinensis]
          Length = 571

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFG 82
           LSNLE+ALKSEQKAPPGTA    R ESR+ FV+  S RP+PRGFG
Sbjct: 524 LSNLEDALKSEQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 568


>ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Vitis vinifera]
           gi|297740127|emb|CBI30309.3| unnamed protein product
           [Vitis vinifera]
          Length = 567

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/47 (68%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAK 76
           LSNLEE LKSEQKAPPGTA    R ESRK F    S RP+PRGFG++
Sbjct: 520 LSNLEETLKSEQKAPPGTARRKRRSESRKQFAEPASSRPSPRGFGSR 566


>ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 565

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAK 76
           LSNLEEALK+E+KAPPGTA    R ESR  F +ST  RP+PRGFG+K
Sbjct: 518 LSNLEEALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFGSK 564


>ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 565

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGAK 76
           LSNLEEALK+E+KAPPGTA    R ESR  F +ST  RP+PRGFG+K
Sbjct: 518 LSNLEEALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFGSK 564


>ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
           gi|223530132|gb|EEF32044.1| signal recognition particle
           protein, putative [Ricinus communis]
          Length = 572

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRK-FVNSTSPRPTPRGFGA 79
           LSNLE+ALK+EQKAPPGTA    R ESR+ F +S S RP+PRGFG+
Sbjct: 525 LSNLEDALKAEQKAPPGTARRKRRSESRRQFADSASSRPSPRGFGS 570


>ref|XP_004494200.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Cicer arietinum]
          Length = 554

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRKFVNSTSPRPTPRGFGAK 76
           LSNLEEALK+E+K PPGTA    R +SR     ++ RPTPRGFG+K
Sbjct: 508 LSNLEEALKTEEKVPPGTARRRKRAQSRSLFADSTSRPTPRGFGSK 553


>ref|XP_006398854.1| hypothetical protein EUTSA_v10013128mg [Eutrema salsugineum]
           gi|557099944|gb|ESQ40307.1| hypothetical protein
           EUTSA_v10013128mg [Eutrema salsugineum]
          Length = 564

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESR-KFVNSTSPRPTPRGFGA 79
           LS+LE+A+K+EQKAPPGTA    + ESR KFV S S +P PRGFG+
Sbjct: 517 LSDLEDAMKAEQKAPPGTARRKRKAESRKKFVESASSKPGPRGFGS 562


>ref|XP_006398853.1| hypothetical protein EUTSA_v10013128mg [Eutrema salsugineum]
           gi|557099943|gb|ESQ40306.1| hypothetical protein
           EUTSA_v10013128mg [Eutrema salsugineum]
          Length = 563

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESR-KFVNSTSPRPTPRGFGA 79
           LS+LE+A+K+EQKAPPGTA    + ESR KFV S S +P PRGFG+
Sbjct: 516 LSDLEDAMKAEQKAPPGTARRKRKAESRKKFVESASSKPGPRGFGS 561


>ref|NP_196014.1| chloroplast signal recognition particle 54 [Arabidopsis thaliana]
           gi|586038|sp|P37107.1|SR54C_ARATH RecName: Full=Signal
           recognition particle 54 kDa protein, chloroplastic;
           Short=54 chloroplast protein; Short=54CP; Short=SRP54;
           Short=cpSRP54; AltName: Full=FFC; Flags: Precursor
           gi|396701|emb|CAA79981.1| 54CP [Arabidopsis thaliana]
           gi|7406404|emb|CAB85514.1| signal recognition particle
           54CP protein precursor [Arabidopsis thaliana]
           gi|15293131|gb|AAK93676.1| putative signal recognition
           particle 54CP protein precursor [Arabidopsis thaliana]
           gi|24030445|gb|AAN41376.1| putative signal recognition
           particle 54CP protein precursor [Arabidopsis thaliana]
           gi|332003291|gb|AED90674.1| chloroplast signal
           recognition particle 54 [Arabidopsis thaliana]
          Length = 564

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESR-KFVNSTSPRPTPRGFGA 79
           LS LE+ALK+EQKAPPGTA    + +SR KFV S S +P PRGFG+
Sbjct: 517 LSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 562


>ref|XP_006381979.1| hypothetical protein POPTR_0006s22810g [Populus trichocarpa]
           gi|550336890|gb|ERP59776.1| hypothetical protein
           POPTR_0006s22810g [Populus trichocarpa]
          Length = 576

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPES-RKFVNSTSPRPTPRGFGA 79
           LSNLE+ALK+EQKA PG A    + ES R+FV+S S RP+PRGFG+
Sbjct: 529 LSNLEDALKTEQKASPGAARRRRKSESRRRFVDSVSSRPSPRGFGS 574


>ref|XP_006290048.1| hypothetical protein CARUB_v10003682mg [Capsella rubella]
           gi|482558754|gb|EOA22946.1| hypothetical protein
           CARUB_v10003682mg [Capsella rubella]
          Length = 564

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESR-KFVNSTSPRPTPRGFGA 79
           LS LE+ALK+EQKAPPGTA    + +SR KFV S S +P PRGFG+
Sbjct: 517 LSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 562


>gb|AAC64139.1| signal recognition particle 54 kDa subunit precursor [Arabidopsis
           thaliana]
          Length = 564

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESR-KFVNSTSPRPTPRGFGA 79
           LS LE+ALK+EQKAPPGTA    + +SR KFV S S +P PRGFG+
Sbjct: 517 LSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 562


>ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
           lyrata] gi|297318961|gb|EFH49383.1| hypothetical protein
           ARALYDRAFT_487173 [Arabidopsis lyrata subsp. lyrata]
          Length = 562

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESR-KFVNSTSPRPTPRGFGA 79
           LS LE+ALK+EQKAPPGTA    + +SR KFV S S +P PRGFG+
Sbjct: 515 LSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 560


>gb|EYU38645.1| hypothetical protein MIMGU_mgv1a003692mg [Mimulus guttatus]
          Length = 569

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -3

Query: 213 LSNLEEALKSEQKAPPGTAXXXXRPESRKFVNSTSPRPTPRGFGAK 76
           LSNLE+ALK EQKAPPGTA    + +SR+    +S +P PRGFG K
Sbjct: 523 LSNLEDALKEEQKAPPGTARRKKKSDSRRQFAGSSAKPGPRGFGGK 568