BLASTX nr result
ID: Cocculus23_contig00018519
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00018519
(389 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_007220666.1| hypothetical protein PRUPE_ppa014747mg, part... 73 4e-11
gb|EYU20120.1| hypothetical protein MIMGU_mgv1a002556mg [Mimulus... 65 1e-08
ref|XP_006421546.1| hypothetical protein CICLE_v10004388mg [Citr... 64 2e-08
ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
gb|EXB25866.1| hypothetical protein L484_012292 [Morus notabilis] 60 2e-07
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr... 60 2e-07
emb|CBI25399.3| unnamed protein product [Vitis vinifera] 60 3e-07
dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens] 60 4e-07
ref|XP_001775099.1| predicted protein [Physcomitrella patens] gi... 60 4e-07
ref|XP_001780298.1| predicted protein [Physcomitrella patens] gi... 60 4e-07
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_007142537.1| hypothetical protein PHAVU_008G289100g [Phas... 56 5e-06
ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containi... 56 5e-06
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi... 56 5e-06
ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi... 56 5e-06
emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera] 56 5e-06
ref|XP_007042438.1| Tetratricopeptide repeat (TPR)-like superfam... 56 6e-06
gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygr... 56 6e-06
>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/45 (77%), Positives = 41/45 (91%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRY 255
ISV G+V KF+SGDQQHPQK+EI+ K+EELR K+KAMGYVPDLRY
Sbjct: 770 ISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRY 814
>ref|XP_007220666.1| hypothetical protein PRUPE_ppa014747mg, partial [Prunus persica]
gi|462417128|gb|EMJ21865.1| hypothetical protein
PRUPE_ppa014747mg, partial [Prunus persica]
Length = 691
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/50 (62%), Positives = 43/50 (86%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDL 240
ISV G++ KF++GD+QHP+K EI+AK+EELR K+K+MGYVPDL Y +D+
Sbjct: 640 ISVKGRIHKFYAGDRQHPEKHEIYAKLEELRVKLKSMGYVPDLSYVLQDV 689
>gb|EYU20120.1| hypothetical protein MIMGU_mgv1a002556mg [Mimulus guttatus]
Length = 659
Score = 64.7 bits (156), Expect = 1e-08
Identities = 26/46 (56%), Positives = 39/46 (84%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYA 252
I+V G+V +F+SGD HP+K++I+ K+EELR MK++GY+PDL+YA
Sbjct: 609 ITVEGRVHRFYSGDTNHPKKDDIYDKLEELRRTMKSLGYIPDLKYA 654
>ref|XP_006421546.1| hypothetical protein CICLE_v10004388mg [Citrus clementina]
gi|557523419|gb|ESR34786.1| hypothetical protein
CICLE_v10004388mg [Citrus clementina]
Length = 762
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYA 252
ISV G+V KF++ DQQHPQKE+I+A +EEL+ K K++GY PDL A
Sbjct: 716 ISVEGRVHKFYASDQQHPQKEDIYATLEELKEKFKSVGYAPDLDVA 761
>ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Citrus sinensis]
Length = 762
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYA 252
ISV G+V KF++ DQQHPQKE+I+A +EEL+ K K+MG PDL A
Sbjct: 716 ISVEGRVHKFYASDQQHPQKEDIYATLEELKEKFKSMGCAPDLDIA 761
>gb|EXB25866.1| hypothetical protein L484_012292 [Morus notabilis]
Length = 767
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/45 (57%), Positives = 37/45 (82%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRY 255
IS+ G+V KF++GDQ H QK+ I+AK+EELR+ +K++ YVPDL Y
Sbjct: 722 ISIKGEVHKFYAGDQLHQQKDHIYAKLEELRTTIKSIDYVPDLSY 766
>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE*DGE 225
I V G+V F +GDQ HP+ EEI++++E L ++K++GYVPD R+ DL+ +G+
Sbjct: 691 IEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGK 745
>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAM 279
ISV G+V KF+SGDQQHPQK+EI+ K+EELR K+KAM
Sbjct: 716 ISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAM 752
>dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE 237
I V GKV F+S D+ HPQ EEI A++E L +M+ +GYVPD RY D+E
Sbjct: 857 IEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVE 907
>ref|XP_001775099.1| predicted protein [Physcomitrella patens]
gi|162673550|gb|EDQ60071.1| predicted protein
[Physcomitrella patens]
Length = 804
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE*DGE 225
I + G+V F + DQ HP+ +EI+A++E L+ +MK++GYVPD R+ DL+ +G+
Sbjct: 675 IEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGK 729
>ref|XP_001780298.1| predicted protein [Physcomitrella patens] gi|162668246|gb|EDQ54857.1|
predicted protein [Physcomitrella patens]
Length = 986
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE 237
I V GKV F+S D+ HPQ EEI A++E L +M+ +GYVPD RY D+E
Sbjct: 857 IEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVE 907
>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRY 255
ISV G + KF++GDQQHP+K++I+AK+EEL+ K+ ++ VPDL Y
Sbjct: 720 ISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSY 764
>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRY 255
ISV G + KF++GDQQHP+K++I+AK+EEL+ K+ ++ VPDL Y
Sbjct: 720 ISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSY 764
>ref|XP_007142537.1| hypothetical protein PHAVU_008G289100g [Phaseolus vulgaris]
gi|561015670|gb|ESW14531.1| hypothetical protein
PHAVU_008G289100g [Phaseolus vulgaris]
Length = 1030
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = -1
Query: 371 VSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE 237
V F +GDQ HP+KE+I+ K++E+ +KM+ +GYVP+ +YA DLE
Sbjct: 908 VHVFVAGDQTHPEKEKIYEKLKEMMNKMRGVGYVPETKYALHDLE 952
>ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Fragaria vesca subsp. vesca]
Length = 631
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDL 240
I V GK F GD HPQ +E++ +EEL KMKA GYVPD R++ D+
Sbjct: 440 IEVNGKAHLFLGGDTSHPQAKEVYMLLEELPKKMKAAGYVPDTRFSLHDV 489
>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Fragaria vesca subsp. vesca]
Length = 867
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE*D 231
I V KV F++G+Q HP E+I+ K+ EL KMK++GYVPD + +D+E D
Sbjct: 738 IEVNNKVDVFYNGNQTHPLCEQIYQKLGELTEKMKSLGYVPDFSFVLQDVEDD 790
>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 56.2 bits (134), Expect = 5e-06
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE 237
I VG +V +F SG QQHP+KE I A++EEL ++K +GYVP + A D+E
Sbjct: 608 IEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIE 658
>emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera]
Length = 558
Score = 56.2 bits (134), Expect = 5e-06
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE 237
I VG +V +F SG QQHP+KE I A++EEL ++K +GYVP + A D+E
Sbjct: 425 IEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIE 475
>ref|XP_007042438.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508706373|gb|EOX98269.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 820
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE*D 231
I V KV F++G++ HP+ EEIF ++ L +KMK++GYVPD + +D+E D
Sbjct: 691 IEVSNKVDVFYTGNRSHPKCEEIFKELRSLTAKMKSLGYVPDYSFVLQDVEED 743
>gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/59 (50%), Positives = 37/59 (62%)
Frame = -1
Query: 389 ISVGGKVSKFFSGDQQHPQKEEIFAKVEELRSKMKAMGYVPDLRYASKDLE*DGEIGHA 213
I V G+V F S D+ HPQ EEI A++ L +MK +GYVPD RY D+E D E HA
Sbjct: 851 IEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVE-DSEKEHA 908