BLASTX nr result
ID: Cocculus23_contig00018511
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00018511
(725 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop... 80 7e-13
gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis] 77 5e-12
ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Popu... 76 1e-11
ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial ... 75 2e-11
ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial ... 75 2e-11
ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobrom... 75 2e-11
ref|XP_006425034.1| hypothetical protein CICLE_v10028981mg [Citr... 74 7e-11
ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chlorop... 73 9e-11
ref|XP_006649801.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 73 1e-10
ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chlorop... 73 1e-10
ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus ... 73 1e-10
gb|EEE58753.1| hypothetical protein OsJ_10246 [Oryza sativa Japo... 72 2e-10
gb|EEC74918.1| hypothetical protein OsI_10864 [Oryza sativa Indi... 72 2e-10
ref|NP_001049648.1| Os03g0265400 [Oryza sativa Japonica Group] g... 72 2e-10
gb|AAP06837.1| unknown protein [Oryza sativa Japonica Group] 72 2e-10
ref|XP_004984686.1| PREDICTED: 50S ribosomal protein L4, chlorop... 71 3e-10
ref|XP_007205651.1| hypothetical protein PRUPE_ppa009351mg [Prun... 70 6e-10
ref|XP_007134448.1| hypothetical protein PHAVU_010G048100g [Phas... 70 1e-09
tpg|DAA44542.1| TPA: 50S ribosomal protein L4 [Zea mays] 70 1e-09
ref|XP_002468132.1| hypothetical protein SORBIDRAFT_01g040120 [S... 70 1e-09
>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
ribosomal protein L4, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 80.1 bits (196), Expect = 7e-13
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +2
Query: 8 PKSIIPNPKSLNH*SDPCSKPSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQ 187
P S+ P K+L+ S+ + P LSF+ KVGET LDLKSAPPETARAV HR IITDQQ
Sbjct: 35 PNSLKPQTKTLSISSELATLPV--LSFTGQKVGETYLDLKSAPPETARAVVHRAIITDQQ 92
Query: 188 NKRRDPSSTLT 220
NKRR +STLT
Sbjct: 93 NKRRGTASTLT 103
>gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis]
Length = 293
Score = 77.4 bits (189), Expect = 5e-12
Identities = 47/75 (62%), Positives = 53/75 (70%)
Frame = +2
Query: 23 PNPKSLNH*SDPCSKPSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRD 202
P PK L+ S+ + P LSF+ +KVGET LDLKSAPPETARAV HR IITD QNKRR
Sbjct: 45 PTPKPLSIISELATLPV--LSFTGEKVGETFLDLKSAPPETARAVVHRGIITDLQNKRRG 102
Query: 203 PSSTLTIKFNAGEVR 247
+STLT GEVR
Sbjct: 103 TASTLT----RGEVR 113
>ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Populus trichocarpa]
gi|550336953|gb|EEE92992.2| hypothetical protein
POPTR_0006s23770g [Populus trichocarpa]
Length = 290
Score = 76.3 bits (186), Expect = 1e-11
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ +K+GET LDLKSAPPETARAV HR IITDQQNKRR +STLT GEVR
Sbjct: 53 LSFTGEKIGETYLDLKSAPPETARAVVHRGIITDQQNKRRGTASTLT----RGEVR 104
>ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial [Theobroma cacao]
gi|508786524|gb|EOY33780.1| 50S ribosomal protein L4
isoform 3, partial [Theobroma cacao]
Length = 269
Score = 75.1 bits (183), Expect = 2e-11
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLT 220
LSF+ +K+GET LDLKSAPPETARAV HR IITDQQNKRR +STLT
Sbjct: 37 LSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLT 83
>ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial [Theobroma cacao]
gi|508786523|gb|EOY33779.1| 50S ribosomal protein L4
isoform 2, partial [Theobroma cacao]
Length = 271
Score = 75.1 bits (183), Expect = 2e-11
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLT 220
LSF+ +K+GET LDLKSAPPETARAV HR IITDQQNKRR +STLT
Sbjct: 37 LSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLT 83
>ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobroma cacao]
gi|508786522|gb|EOY33778.1| 50S ribosomal protein L4
isoform 1 [Theobroma cacao]
Length = 303
Score = 75.1 bits (183), Expect = 2e-11
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLT 220
LSF+ +K+GET LDLKSAPPETARAV HR IITDQQNKRR +STLT
Sbjct: 54 LSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLT 100
>ref|XP_006425034.1| hypothetical protein CICLE_v10028981mg [Citrus clementina]
gi|568870601|ref|XP_006488488.1| PREDICTED: 50S
ribosomal protein L4, chloroplastic-like [Citrus
sinensis] gi|557526968|gb|ESR38274.1| hypothetical
protein CICLE_v10028981mg [Citrus clementina]
Length = 288
Score = 73.6 bits (179), Expect = 7e-11
Identities = 43/80 (53%), Positives = 51/80 (63%)
Frame = +2
Query: 8 PKSIIPNPKSLNH*SDPCSKPSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQ 187
P S+I P S + P LSF+ +K+GET LDLKSA P+TARAV HR +ITD Q
Sbjct: 33 PNSLINLPPKPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQ 92
Query: 188 NKRRDPSSTLTIKFNAGEVR 247
NKRR +STLT GEVR
Sbjct: 93 NKRRGTASTLT----RGEVR 108
>ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform X1
[Glycine max] gi|571465968|ref|XP_006583523.1|
PREDICTED: 50S ribosomal protein L4, chloroplastic-like
isoform X2 [Glycine max]
Length = 303
Score = 73.2 bits (178), Expect = 9e-11
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = +2
Query: 5 NPKSIIPNPKSLNH*SDPCSKPSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQ 184
N I+P+ K L+ S S P L+FS ++VGE+ LDL+SAPP+TARAV HR ++TD
Sbjct: 36 NKFPILPSKKPLSI-SCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDL 94
Query: 185 QNKRRDPSSTLTIKFNAGEVR 247
QNKRR +STLT GEVR
Sbjct: 95 QNKRRGTASTLT----RGEVR 111
>ref|XP_006649801.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L4,
chloroplastic-like [Oryza brachyantha]
Length = 320
Score = 72.8 bits (177), Expect = 1e-10
Identities = 40/60 (66%), Positives = 44/60 (73%)
Frame = +2
Query: 68 PSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
P LSFS +KVGE LDLKSAPP TARAV HR +ITD+QNKRR +STLT GEVR
Sbjct: 63 PLPVLSFSGEKVGEVALDLKSAPPSTARAVVHRGLITDRQNKRRGTASTLT----RGEVR 118
>ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
[Glycine max]
Length = 310
Score = 72.8 bits (177), Expect = 1e-10
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +2
Query: 5 NPKSIIPNPKSLNH*SDPCSKPSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQ 184
N ++P+ K L+ S S P L+FS ++VGE+ LDL+SAPP+TARAV HR ++TD
Sbjct: 41 NSFPVLPSKKPLSI-SCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDL 99
Query: 185 QNKRRDPSSTLTIKFNAGEVR 247
QNKRR +STLT GEVR
Sbjct: 100 QNKRRGTASTLT----RGEVR 116
>ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223535036|gb|EEF36718.1| 50S ribosomal protein L4,
putative [Ricinus communis]
Length = 283
Score = 72.8 bits (177), Expect = 1e-10
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLT 220
LSF+ +K+GET LDLK+APP+TARAV HR IITDQQNKRR +STLT
Sbjct: 57 LSFTGEKIGETYLDLKTAPPDTARAVVHRAIITDQQNKRRGTASTLT 103
>gb|EEE58753.1| hypothetical protein OsJ_10246 [Oryza sativa Japonica Group]
Length = 323
Score = 72.0 bits (175), Expect = 2e-10
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ +KVGE LDLKSAPP TARAV HR IITD+QNKRR +STLT GEVR
Sbjct: 70 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLT----RGEVR 121
>gb|EEC74918.1| hypothetical protein OsI_10864 [Oryza sativa Indica Group]
Length = 324
Score = 72.0 bits (175), Expect = 2e-10
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ +KVGE LDLKSAPP TARAV HR IITD+QNKRR +STLT GEVR
Sbjct: 71 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLT----RGEVR 122
>ref|NP_001049648.1| Os03g0265400 [Oryza sativa Japonica Group]
gi|108707338|gb|ABF95133.1| 50S ribosomal protein L4,
chloroplast precursor, putative, expressed [Oryza sativa
Japonica Group] gi|113548119|dbj|BAF11562.1|
Os03g0265400 [Oryza sativa Japonica Group]
gi|215678998|dbj|BAG96428.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215692528|dbj|BAG87948.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737540|dbj|BAG96670.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 323
Score = 72.0 bits (175), Expect = 2e-10
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ +KVGE LDLKSAPP TARAV HR IITD+QNKRR +STLT GEVR
Sbjct: 70 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLT----RGEVR 121
>gb|AAP06837.1| unknown protein [Oryza sativa Japonica Group]
Length = 426
Score = 72.0 bits (175), Expect = 2e-10
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ +KVGE LDLKSAPP TARAV HR IITD+QNKRR +STLT GEVR
Sbjct: 70 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLT----RGEVR 121
>ref|XP_004984686.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Setaria
italica]
Length = 308
Score = 71.2 bits (173), Expect = 3e-10
Identities = 39/56 (69%), Positives = 42/56 (75%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ DKVGE LDLKSAPP TARAV HR IITD+QN RR +STLT GEVR
Sbjct: 63 LSFTGDKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLT----RGEVR 114
>ref|XP_007205651.1| hypothetical protein PRUPE_ppa009351mg [Prunus persica]
gi|462401293|gb|EMJ06850.1| hypothetical protein
PRUPE_ppa009351mg [Prunus persica]
Length = 296
Score = 70.5 bits (171), Expect = 6e-10
Identities = 41/71 (57%), Positives = 48/71 (67%)
Frame = +2
Query: 8 PKSIIPNPKSLNH*SDPCSKPSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQ 187
P + PK L S+ + P LSF+ DKVGET LDLK+A P+TARAV HR IITD Q
Sbjct: 32 PNNSFKTPKPLTISSELATLPV--LSFTGDKVGETFLDLKAALPDTARAVVHRAIITDLQ 89
Query: 188 NKRRDPSSTLT 220
NKRR +STLT
Sbjct: 90 NKRRGTASTLT 100
>ref|XP_007134448.1| hypothetical protein PHAVU_010G048100g [Phaseolus vulgaris]
gi|561007493|gb|ESW06442.1| hypothetical protein
PHAVU_010G048100g [Phaseolus vulgaris]
Length = 308
Score = 69.7 bits (169), Expect = 1e-09
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = +2
Query: 62 SKPSQSLSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGE 241
+ P L+FS +KVGE+ LDL+SAPP TARAV HR ++TD QNKRR +STLT GE
Sbjct: 57 ASPIPVLNFSGEKVGESLLDLRSAPPSTARAVVHRAVVTDLQNKRRGTASTLT----RGE 112
Query: 242 VR 247
VR
Sbjct: 113 VR 114
>tpg|DAA44542.1| TPA: 50S ribosomal protein L4 [Zea mays]
Length = 314
Score = 69.7 bits (169), Expect = 1e-09
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ +KVGE LDLKSAPP TARAV HR IITD+QN RR +STLT GEVR
Sbjct: 65 LSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLT----RGEVR 116
>ref|XP_002468132.1| hypothetical protein SORBIDRAFT_01g040120 [Sorghum bicolor]
gi|241921986|gb|EER95130.1| hypothetical protein
SORBIDRAFT_01g040120 [Sorghum bicolor]
Length = 297
Score = 69.7 bits (169), Expect = 1e-09
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +2
Query: 80 LSFSSDKVGETELDLKSAPPETARAVDHRRIITDQQNKRRDPSSTLTIKFNAGEVR 247
LSF+ +KVGE LDLKSAPP TARAV HR IITD+QN RR +STLT GEVR
Sbjct: 59 LSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLT----RGEVR 110