BLASTX nr result
ID: Cocculus23_contig00018181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00018181
(284 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-... 88 1e-15
ref|XP_006465091.1| PREDICTED: DNA excision repair protein ERCC-... 75 1e-11
ref|XP_006465090.1| PREDICTED: DNA excision repair protein ERCC-... 75 1e-11
ref|XP_006432136.1| hypothetical protein CICLE_v10000096mg [Citr... 75 1e-11
gb|EXB36902.1| DNA excision repair protein ERCC-6-like protein [... 74 2e-11
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu... 74 2e-11
ref|XP_002306264.2| hypothetical protein POPTR_0005s06770g [Popu... 69 9e-10
ref|XP_004503910.1| PREDICTED: DNA excision repair protein ERCC-... 67 3e-09
ref|XP_004503909.1| PREDICTED: DNA excision repair protein ERCC-... 67 3e-09
ref|XP_007048407.1| Chromatin remodeling 24 [Theobroma cacao] gi... 67 3e-09
ref|XP_004289286.1| PREDICTED: DNA excision repair protein ERCC-... 65 7e-09
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot... 61 1e-07
ref|XP_007159864.1| hypothetical protein PHAVU_002G274300g [Phas... 60 2e-07
ref|XP_006345475.1| PREDICTED: DNA excision repair protein ERCC-... 60 4e-07
ref|XP_002448839.1| hypothetical protein SORBIDRAFT_06g034160 [S... 59 5e-07
ref|XP_002309928.1| hypothetical protein POPTR_0007s04450g [Popu... 59 7e-07
ref|XP_006394224.1| hypothetical protein EUTSA_v10003558mg [Eutr... 58 1e-06
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-... 58 1e-06
gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indi... 58 2e-06
tpg|DAA36828.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea m... 57 3e-06
>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
gi|296088517|emb|CBI37508.3| unnamed protein product
[Vitis vinifera]
Length = 1043
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+ESEIK RI RL Q LANKA +SKLPDKGER+++QI ELN ELD++RM R E IDLD
Sbjct: 972 TESEIKGRINRLSQILANKATVSKLPDKGERIQKQIAELNLELDKMRMTKRIETEVIDLD 1031
Query: 102 DISGK 88
D++GK
Sbjct: 1032 DVTGK 1036
>ref|XP_006465091.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform X2 [Citrus
sinensis]
Length = 1149
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = -3
Query: 279 ESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLDD 100
ES+IK+RI RL Q ++NK + +LPDKG ++++QI ELN+EL++I+M R IDLDD
Sbjct: 1075 ESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEPGVIDLDD 1134
Query: 99 ISGK 88
++GK
Sbjct: 1135 VTGK 1138
>ref|XP_006465090.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform X1 [Citrus
sinensis]
Length = 1181
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = -3
Query: 279 ESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLDD 100
ES+IK+RI RL Q ++NK + +LPDKG ++++QI ELN+EL++I+M R IDLDD
Sbjct: 1107 ESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEPGVIDLDD 1166
Query: 99 ISGK 88
++GK
Sbjct: 1167 VTGK 1170
>ref|XP_006432136.1| hypothetical protein CICLE_v10000096mg [Citrus clementina]
gi|557534258|gb|ESR45376.1| hypothetical protein
CICLE_v10000096mg [Citrus clementina]
Length = 1107
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = -3
Query: 279 ESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLDD 100
ES+IK+RI RL Q ++NK + +LPDKG ++++QI ELN+EL++I+M R IDLDD
Sbjct: 1033 ESDIKERIKRLSQLISNKVTVERLPDKGTKLQKQIAELNSELNKIKMEKRPEPGVIDLDD 1092
Query: 99 ISGK 88
++GK
Sbjct: 1093 VTGK 1096
>gb|EXB36902.1| DNA excision repair protein ERCC-6-like protein [Morus notabilis]
Length = 1236
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+ESEIK+RI RL TLANKA++S+LPD G++++ QI EL+ EL RI+M KE IDLD
Sbjct: 1116 TESEIKERISRLSNTLANKAMVSRLPDNGQKIQIQIAELSAELHRIKMKKENKKEVIDLD 1175
Query: 102 DISGK 88
++ +
Sbjct: 1176 SLTSE 1180
>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
gi|223544553|gb|EEF46070.1| ATP binding protein, putative
[Ricinus communis]
Length = 1109
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+ESEIK+RI RL Q L N A +S+LPD+G ++++QI +LN ELD+I M +E IDLD
Sbjct: 1038 TESEIKERISRLSQLLGNMATVSRLPDRGAKLQKQISDLNLELDKINMEKSTKEEVIDLD 1097
Query: 102 DISGK 88
D++G+
Sbjct: 1098 DLTGE 1102
>ref|XP_002306264.2| hypothetical protein POPTR_0005s06770g [Populus trichocarpa]
gi|550338279|gb|EEE93260.2| hypothetical protein
POPTR_0005s06770g [Populus trichocarpa]
Length = 1058
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/66 (51%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKE-TIDL 106
+ESEIK+RI RL Q L NK IS+LPD+G ++++QI ELN+EL+++RM +E I L
Sbjct: 986 TESEIKERINRLSQILGNKVTISRLPDQGAKLQKQIGELNSELNKLRMETATEREGIISL 1045
Query: 105 DDISGK 88
DD++G+
Sbjct: 1046 DDLTGE 1051
>ref|XP_004503910.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform X2 [Cicer
arietinum]
Length = 1071
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+E EIKDRI RL Q L +ISKLPDKGE++RR I ELN EL +++M IDLD
Sbjct: 1003 TELEIKDRIVRLSQMLTKTEMISKLPDKGEKLRRHIAELNRELTKLKME---QTNVIDLD 1059
Query: 102 DISGK 88
D +G+
Sbjct: 1060 DFTGE 1064
>ref|XP_004503909.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform X1 [Cicer
arietinum]
Length = 1098
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+E EIKDRI RL Q L +ISKLPDKGE++RR I ELN EL +++M IDLD
Sbjct: 1030 TELEIKDRIVRLSQMLTKTEMISKLPDKGEKLRRHIAELNRELTKLKME---QTNVIDLD 1086
Query: 102 DISGK 88
D +G+
Sbjct: 1087 DFTGE 1091
>ref|XP_007048407.1| Chromatin remodeling 24 [Theobroma cacao] gi|508700668|gb|EOX92564.1|
Chromatin remodeling 24 [Theobroma cacao]
Length = 1060
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/65 (47%), Positives = 48/65 (73%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+E+EIK+RI RL Q +NK +S+LPDKG ++ +QI ELN EL +++MA K+ + +D
Sbjct: 990 TENEIKERINRLSQIFSNKVTVSRLPDKGAKIEKQIAELNEELHKMKMAKEA-KDEVGVD 1048
Query: 102 DISGK 88
DI+G+
Sbjct: 1049 DITGE 1053
>ref|XP_004289286.1| PREDICTED: DNA excision repair protein ERCC-6-like [Fragaria vesca
subsp. vesca]
Length = 957
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
++SEIK+ I RL QTLANK+++++LPDKG+++ RQI ELN EL R ++ IDLD
Sbjct: 893 TKSEIKENINRLSQTLANKSLVARLPDKGQKIERQISELNAELRRF------ERDVIDLD 946
Query: 102 DIS 94
D++
Sbjct: 947 DVT 949
>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago truncatula]
gi|355524327|gb|AET04781.1| DNA excision repair protein
ERCC-6-like protein [Medicago truncatula]
Length = 1129
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/65 (47%), Positives = 45/65 (69%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+E EIKDRI RL L+N +ISKLPD GE+++++I ELN L +++M +DLD
Sbjct: 1027 TELEIKDRIDRLSLMLSNTVMISKLPDNGEKLKKRIAELNRALTKLKME---QTNIVDLD 1083
Query: 102 DISGK 88
DI+G+
Sbjct: 1084 DIAGE 1088
>ref|XP_007159864.1| hypothetical protein PHAVU_002G274300g [Phaseolus vulgaris]
gi|561033279|gb|ESW31858.1| hypothetical protein
PHAVU_002G274300g [Phaseolus vulgaris]
Length = 1030
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/60 (50%), Positives = 45/60 (75%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+ES+IKD+I RL QTL+N A+I+KLPDKGE++++++ EL+ EL + R + IDLD
Sbjct: 963 TESDIKDKINRLSQTLSNAAMIAKLPDKGEKLQKRLEELSLELAEL----RSERNVIDLD 1018
>ref|XP_006345475.1| PREDICTED: DNA excision repair protein ERCC-6-like [Solanum
tuberosum]
Length = 1209
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+ES+I+D + R + LANK ISKLPDKG+ + R+I L EL+ I M E IDLD
Sbjct: 1137 TESQIQDDLRRCYALLANKETISKLPDKGQNIERRIANLYKELETIGMEKNNKDEIIDLD 1196
Query: 102 D 100
D
Sbjct: 1197 D 1197
>ref|XP_002448839.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor]
gi|241940022|gb|EES13167.1| hypothetical protein
SORBIDRAFT_06g034160 [Sorghum bicolor]
Length = 1042
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNK----ET 115
S EIK RI RL QTL+N A++SKLPD GE++RRQI EL+ +++ A +G K E
Sbjct: 969 SPEEIKARINRLSQTLSNAALVSKLPDGGEKIRRQISELD---EKLASAEKGQKEEATEV 1025
Query: 114 IDLDDI 97
I LDD+
Sbjct: 1026 ISLDDL 1031
>ref|XP_002309928.1| hypothetical protein POPTR_0007s04450g [Populus trichocarpa]
gi|222852831|gb|EEE90378.1| hypothetical protein
POPTR_0007s04450g [Populus trichocarpa]
Length = 1108
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKE-TIDL 106
+ESEI +RI RL Q L NK + +LPD+G ++++QI ELN+ L +RM +E I L
Sbjct: 1036 TESEILERINRLSQLLGNKVTVLRLPDQGAKLQKQISELNSVLIELRMEKATEREGVISL 1095
Query: 105 DDISGK 88
DD++G+
Sbjct: 1096 DDLTGE 1101
>ref|XP_006394224.1| hypothetical protein EUTSA_v10003558mg [Eutrema salsugineum]
gi|557090863|gb|ESQ31510.1| hypothetical protein
EUTSA_v10003558mg [Eutrema salsugineum]
Length = 1093
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGN-KETIDL 106
SESEIK RI RL NK ISKLPD G ++++QI EL EL I+ A + + IDL
Sbjct: 1021 SESEIKARISRLTMIFENKNTISKLPDGGAKIKKQIDELTRELKEIKAAQSNDMPQVIDL 1080
Query: 105 DDISGK 88
+DIS K
Sbjct: 1081 EDISQK 1086
>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 1030
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/63 (47%), Positives = 45/63 (71%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMANRGNKETIDLD 103
+ESEIKD+I + QTL+N A SKLPDKGE++++++ ELN EL ++ R + +DLD
Sbjct: 964 TESEIKDKIKSISQTLSNMA--SKLPDKGEKLQKRLAELNLELAELK---REERNVVDLD 1018
Query: 102 DIS 94
D +
Sbjct: 1019 DFT 1021
>gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indica Group]
Length = 987
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIR-----MANRGNKE 118
S EIK +I RL QTLAN +++KLPD+G+++RRQI EL+ +L I + +G E
Sbjct: 919 SPEEIKAKINRLSQTLANTVLVAKLPDRGDKIRRQINELDEKLTVIESSPEPLERKGPAE 978
Query: 117 TIDLDDIS 94
I LDD+S
Sbjct: 979 VICLDDLS 986
>tpg|DAA36828.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 1048
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = -3
Query: 282 SESEIKDRIYRLHQTLANKAVISKLPDKGERMRRQIVELNTELDRIRMA-NRGNKETIDL 106
S EIK RI RL QTL+N ++SKLPD GE++RRQI EL+ +L G E I L
Sbjct: 987 SPEEIKARINRLSQTLSNAVLLSKLPDGGEKIRRQINELDEKLTSAEKGLKEGGTEVISL 1046
Query: 105 DD 100
DD
Sbjct: 1047 DD 1048