BLASTX nr result

ID: Cocculus23_contig00018083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00018083
         (966 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64367.1| hypothetical protein VITISV_018691 [Vitis vinifera]    47   1e-08

>emb|CAN64367.1| hypothetical protein VITISV_018691 [Vitis vinifera]
          Length = 497

 Score = 46.6 bits (109), Expect(3) = 1e-08
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -1

Query: 387 WLSMDDSSSSHLIDWGTV*RLGGKRSLAIGNIKLRNKALVSK*LWRLP 244
           W  + +    HL+ W  V +   K  L IGNI LRN+AL+ K LWR P
Sbjct: 202 WSGLGEGKRHHLVSWDAVCKPRVKXGLGIGNIPLRNRALLGKWLWRYP 249



 Score = 30.8 bits (68), Expect(3) = 1e-08
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 569 IISNLH*RGQSWKSKNFGGGWSINCM-LILSTIPTFSLSIFRIPSKLIKKIERRIRNF 399
           +I  +  R   W+      G  I  +   LS IP++ LS+F+I + +  K+ER  R+F
Sbjct: 143 VIGRISRRLDGWQKAYLSLGGRITLLHSCLSHIPSYFLSLFKIXALMAAKVERMQRDF 200



 Score = 28.5 bits (62), Expect(3) = 1e-08
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 215 VRSKYGLLDNGWDTRIALRITYSSPWEFISSFLKGFT 105
           + S Y    NGWD    +R ++  PW+ I+   + F+
Sbjct: 260 ILSIYETHSNGWDANTLVRWSHRCPWKAIAQVFQDFS 296


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