BLASTX nr result

ID: Cocculus23_contig00017866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00017866
         (315 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]           63   5e-08
ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263...    60   3e-07
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628...    58   1e-06

>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = -1

Query: 285 RGCSSKTNSNKKGKCYFCEKPGHFACDCCL*KKSLKGKEVVQESNMVEDLELIAIVCQAN 106
           +G  SK  +  +GKCY C+K GH A DC L KK  +   V   +  V D+ L A+V + N
Sbjct: 257 KGGISKKQTKFQGKCYNCDKMGHKASDCRLPKKKREANVVENITQHVSDINLSAVVLEVN 316

Query: 105 SV-ANENGWWPDTGAT 61
            V +N   WW DTGAT
Sbjct: 317 MVGSNPREWWIDTGAT 332


>ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263787 [Solanum
            lycopersicum]
          Length = 2703

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -1

Query: 315  VKPKND*SFKRGCSSKTNSNKKG-KCYFCEKPGHFACDCCL*KKSLKGKEVVQESNMVED 139
            +K K   +FKR     TNSN K  KCY C K GH+A DC    K LK ++  +++N    
Sbjct: 977  LKAKKSKNFKR-----TNSNSKSIKCYHCHKIGHYARDC----KILKAEKKKEKANNNTK 1027

Query: 138  LELIAIVCQANSVANENGWWPDTGAT 61
             EL+A+V +A    ++  WW DTGAT
Sbjct: 1028 NELVAMVTEAFVAGDQVEWWIDTGAT 1053


>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
          Length = 2248

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
 Frame = -1

Query: 312  KPKND*SFK---RGCSSKTNSNKKGKCYFCEKPGHFACDCCL*KKSLKGKEVVQESNMVE 142
            +PKN  + K   +G  SK  +N +GK + C+K GH   DC L KK  +   V   +  V 
Sbjct: 1180 RPKNKKNKKLGPKGGISKKQTNFQGKYFNCDKMGHKVSDCRLPKKKREENVVENITQHVS 1239

Query: 141  DLELIAIVCQANSV-ANENGWWPDTGAT 61
            D+ L A+V + N V +N   WW DTGAT
Sbjct: 1240 DINLSAVVSEVNLVGSNPREWWIDTGAT 1267


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