BLASTX nr result
ID: Cocculus23_contig00017866
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00017866 (315 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 63 5e-08 ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263... 60 3e-07 ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628... 58 1e-06 >gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] Length = 701 Score = 62.8 bits (151), Expect = 5e-08 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = -1 Query: 285 RGCSSKTNSNKKGKCYFCEKPGHFACDCCL*KKSLKGKEVVQESNMVEDLELIAIVCQAN 106 +G SK + +GKCY C+K GH A DC L KK + V + V D+ L A+V + N Sbjct: 257 KGGISKKQTKFQGKCYNCDKMGHKASDCRLPKKKREANVVENITQHVSDINLSAVVLEVN 316 Query: 105 SV-ANENGWWPDTGAT 61 V +N WW DTGAT Sbjct: 317 MVGSNPREWWIDTGAT 332 >ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263787 [Solanum lycopersicum] Length = 2703 Score = 60.1 bits (144), Expect = 3e-07 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Frame = -1 Query: 315 VKPKND*SFKRGCSSKTNSNKKG-KCYFCEKPGHFACDCCL*KKSLKGKEVVQESNMVED 139 +K K +FKR TNSN K KCY C K GH+A DC K LK ++ +++N Sbjct: 977 LKAKKSKNFKR-----TNSNSKSIKCYHCHKIGHYARDC----KILKAEKKKEKANNNTK 1027 Query: 138 LELIAIVCQANSVANENGWWPDTGAT 61 EL+A+V +A ++ WW DTGAT Sbjct: 1028 NELVAMVTEAFVAGDQVEWWIDTGAT 1053 >ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis] Length = 2248 Score = 58.2 bits (139), Expect = 1e-06 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%) Frame = -1 Query: 312 KPKND*SFK---RGCSSKTNSNKKGKCYFCEKPGHFACDCCL*KKSLKGKEVVQESNMVE 142 +PKN + K +G SK +N +GK + C+K GH DC L KK + V + V Sbjct: 1180 RPKNKKNKKLGPKGGISKKQTNFQGKYFNCDKMGHKVSDCRLPKKKREENVVENITQHVS 1239 Query: 141 DLELIAIVCQANSV-ANENGWWPDTGAT 61 D+ L A+V + N V +N WW DTGAT Sbjct: 1240 DINLSAVVSEVNLVGSNPREWWIDTGAT 1267