BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00017640
         (3158 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ...   922   0.0  
ref|XP_006482097.1| PREDICTED: DNA repair protein complementing ...   897   0.0  
ref|XP_006482096.1| PREDICTED: DNA repair protein complementing ...   897   0.0  
ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citr...   894   0.0  
ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative iso...   883   0.0  
ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative iso...   883   0.0  
ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu...   878   0.0  
gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus...   856   0.0  
ref|XP_007217691.1| hypothetical protein PRUPE_ppa001034mg [Prun...   816   0.0  
ref|XP_006596501.1| PREDICTED: DNA repair protein complementing ...   806   0.0  
ref|XP_003544368.1| PREDICTED: DNA repair protein complementing ...   806   0.0  
ref|XP_004155756.1| PREDICTED: DNA repair protein complementing ...   803   0.0  
ref|XP_004140360.1| PREDICTED: DNA repair protein complementing ...   801   0.0  
ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [A...   793   0.0  
ref|XP_004289443.1| PREDICTED: DNA repair protein complementing ...   793   0.0  
ref|XP_006364632.1| PREDICTED: DNA repair protein complementing ...   780   0.0  
ref|XP_006364631.1| PREDICTED: DNA repair protein complementing ...   780   0.0  
ref|XP_004250530.1| PREDICTED: DNA repair protein complementing ...   780   0.0  
ref|XP_002871728.1| DNA repair protein Rad4 family [Arabidopsis ...   739   0.0  
ref|NP_197166.2| DNA repair protein Rad4 [Arabidopsis thaliana] ...   735   0.0  

>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
            vinifera]
          Length = 1103

 Score =  922 bits (2383), Expect = 0.0
 Identities = 504/901 (55%), Positives = 606/901 (67%), Gaps = 10/901 (1%)
 Frame = +2

Query: 221  ERKIDESVS--CALPEKEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKK 394
            E+++DE  S    L   ED +ESDWE+G +   D+ + H +   +E+ +E S L  SS++
Sbjct: 264  EKEVDEKSSQDTYLNSGEDINESDWEEGSIPTLDSVDNHQNAGIKEVTIELSGLLDSSQQ 323

Query: 395  KPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIP 574
            KPIRRASAE+KELAELVHKVHLLCLLARGRL+DSACNDPL QASLLSL+P  LLK  EIP
Sbjct: 324  KPIRRASAEDKELAELVHKVHLLCLLARGRLIDSACNDPLVQASLLSLLPADLLKISEIP 383

Query: 575  KLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALN 754
            +LTAN  T +V WFH+NF VRS S+  +P   +LA ALE H GT EEVAALSV+LFRALN
Sbjct: 384  RLTANAFTLLVRWFHDNFRVRSPSSVERPLHSSLAFALEAHEGTPEEVAALSVALFRALN 443

Query: 755  LTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTY 934
            LTTRFV ILDV  LKP     AD S +  QN N  + GIF++STLMV R +Q SSS P  
Sbjct: 444  LTTRFVSILDVAPLKP----GADKSESAIQNANRASGGIFDNSTLMVARKNQVSSS-PVK 498

Query: 935  LNKTGPNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMP-ATLLNDNVLNSSALNDE--TS 1105
             +     G++     +   +  +  + T K   ST  P +  LND +L+S A  ++   S
Sbjct: 499  SSSCHVKGNVCEPSQNNACTNKDLKS-TRKTAQSTDSPISDQLNDRMLDSLACKEQFAIS 557

Query: 1106 AICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRI 1285
              C T K EGSKRKGDLEF++Q+EMAL+ATA  +                    SPL R+
Sbjct: 558  EDCITDKPEGSKRKGDLEFKMQLEMALSATAVGINESNGGSNVKELFSESSSFSSPLKRV 617

Query: 1286 KRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKI 1465
            KRIK EE P  SQGISTAVGSRK GAP YWAE+FC+GENLTGKWVH+D +NAIIDGE K+
Sbjct: 618  KRIKIEEYPTPSQGISTAVGSRKIGAPLYWAEVFCTGENLTGKWVHIDAINAIIDGEEKV 677

Query: 1466 EAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGA 1645
            EAA+ AC+  LRYVVAF+G+GAKDVTRRYCMKWY+IAS+R+NS WWDAVLAPLKELE+GA
Sbjct: 678  EAAAAACKTSLRYVVAFSGNGAKDVTRRYCMKWYRIASQRINSAWWDAVLAPLKELEAGA 737

Query: 1646 TGGMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQ 1825
             GG+  L                                               K  +K+
Sbjct: 738  VGGVEVL-----------------------------------------------KENVKK 750

Query: 1826 SKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNK 2005
             +    + N+        VATR+SLED+EL+TRALTEPLPTNQQAYKNH LYA+ERW  K
Sbjct: 751  VRAESSDRNA-------FVATRDSLEDMELETRALTEPLPTNQQAYKNHQLYAMERWLTK 803

Query: 2006 YQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNA 2185
            YQILHPKGPVLG+CSGHPVYPRTCVQ L+TKQRWLR+GLQVKA E P KV+K S K    
Sbjct: 804  YQILHPKGPVLGFCSGHPVYPRTCVQTLKTKQRWLREGLQVKADEHPTKVLKCSSKLSKV 863

Query: 2186 QACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVH 2365
            QA E     +A+  G+IALYG+WQ EPL LPCAVNG+VPKNE GQVDVWSEKCLPPGTVH
Sbjct: 864  QALEAVDYGDADPGGTIALYGRWQMEPLCLPCAVNGIVPKNEWGQVDVWSEKCLPPGTVH 923

Query: 2366 LRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXX 2545
            LR+PRVVP+AK+LEIDFAPAMVGFEFRNGRS+PVF+GIVVC EFKD I+           
Sbjct: 924  LRVPRVVPIAKKLEIDFAPAMVGFEFRNGRSIPVFDGIVVCAEFKDTILEVYADEEERRQ 983

Query: 2546 XXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGA-HISSFGD 2722
                      A+SRWYQLLSSI+ RQRLN +YG+G  SD  +  +K + R +  +    +
Sbjct: 984  AEEKRGIEAHAVSRWYQLLSSIVIRQRLNNSYGNGLLSDTSNGIKKVNNRSSWQVEGRDN 1043

Query: 2723 DRLSNKCHEGLVSKQNF----KLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEE 2890
            DR   +C +G V   N      +  EDHEH+F I ++ FDEEN  RTKRC CGF +QVEE
Sbjct: 1044 DRQFLECQQGYVEDTNLDPPSMVFREDHEHVF-IAEEGFDEENLVRTKRCGCGFSIQVEE 1102

Query: 2891 L 2893
            L
Sbjct: 1103 L 1103


>ref|XP_006482097.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Citrus sinensis]
          Length = 954

 Score =  897 bits (2319), Expect = 0.0
 Identities = 502/953 (52%), Positives = 615/953 (64%), Gaps = 17/953 (1%)
 Frame = +2

Query: 86   IEMRTRNQSKRLSQDPSLDRS--EEDGGQEAEKEVP--------CNAPMPANVPHERKID 235
            +  R+ ++SK+      L  S  +  G QE +K V         C+     N   E    
Sbjct: 33   VNARSSSRSKKQDCAVGLTTSVLKVSGKQEVDKRVTWSDVDAHGCSRDAMGNTLRELDEG 92

Query: 236  ESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIRRAS 415
                  L   E+  +SDWEDG + V+ +   H ++  + + +EF D   S  KKP+RRAS
Sbjct: 93   RLQDNVLDGGEEMYDSDWEDGSIPVACSKENHPESDIKGVTIEF-DAADSVTKKPVRRAS 151

Query: 416  AEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTANDL 595
            AE+KELAELVHKVHLLCLLARGRL+DS C+DPL QASLLSL+P +LLK  E+ KLTAN L
Sbjct: 152  AEDKELAELVHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISEVSKLTANAL 211

Query: 596  TPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRFVC 775
            +PIV+WFH+NFHVRSS ++ + F   LA ALE+  GT EE+AALSV+LFRAL LTTRFV 
Sbjct: 212  SPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVS 271

Query: 776  ILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTYLNKTGPN 955
            ILDV SLKP+    AD + + NQ+ + +  GIFN+ TLMV +  +  +S P         
Sbjct: 272  ILDVASLKPE----ADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLAS-PVKSFSCDKK 326

Query: 956  GDIVNEMSHGVAS---QVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAICPTKK 1126
             ++    S G         +SN T           +  N +  +S A +D + A  P +K
Sbjct: 327  ENVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHPKEK 386

Query: 1127 TEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKRIKSEE 1306
            ++  KRKGDLEFE+Q+EMAL+AT    +                 +  P+ R+K+I+S E
Sbjct: 387  SQALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNSSTVL-PVKRLKKIESGE 445

Query: 1307 SPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFAC 1486
            S  S  GISTAVGSRK GAP YWAE++CSGENLTGKWVHVD  NAIIDGE K+EAA+ AC
Sbjct: 446  SSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAAC 505

Query: 1487 RKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGGMVHL 1666
            +  LRY+VAFAG GAKDVTRRYCMKWY+IASKRVNS WWDAVLAPL+ELESGATGGM  +
Sbjct: 506  KTSLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLRELESGATGGMTQM 565

Query: 1667 DIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSKTHDVN 1846
            ++   NASN  +  A K S   Y          SF   + LSG              D +
Sbjct: 566  EMRHVNASNTLE--ALKTSNYPYRD--------SFPNHVSLSG--------------DSD 601

Query: 1847 TNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILHPK 2026
             N +S  +   VA RNSLED+EL+TRALTEPLPTNQQAYKNH LY IERW NKYQIL+PK
Sbjct: 602  LNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPK 661

Query: 2027 GPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEPGV 2206
            GP+LG+CSGH VYPR+CVQ L+TK+RWL++ LQVKA+E P KV+K S K    Q  EP  
Sbjct: 662  GPILGFCSGHAVYPRSCVQTLKTKERWLQEALQVKATEVPVKVIKNSSKSNRGQDFEPED 721

Query: 2207 CEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPRVV 2386
             +E +  G+I LYGKWQ EPL LP AVNG+VP+NERGQVDVWSEKCLPPGTVHLRLPRV 
Sbjct: 722  YDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVY 781

Query: 2387 PVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXXXX 2566
             VAKRLEID APAMVGFEFRNGRS PVF+GIVVC EFKD I+                  
Sbjct: 782  SVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCVEFKDTILEAYAEEEEKREAEEKKRR 841

Query: 2567 XXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGAHI---SSFGDDRLSN 2737
              QA SRWYQLLSSI+TRQRLN  YG+ S+S    N Q   +  +++   SS  D +  N
Sbjct: 842  EAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNFQNVKKTNSNVGVDSSQNDWQSPN 901

Query: 2738 KCHEGLVS-KQNFKLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            +  +G            E+HEH++ IEDQSFDEENS  TKRC CGF +QVEEL
Sbjct: 902  QIDKGDTKLHAPSPAQSEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 954


>ref|XP_006482096.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Citrus sinensis]
          Length = 974

 Score =  897 bits (2319), Expect = 0.0
 Identities = 502/953 (52%), Positives = 615/953 (64%), Gaps = 17/953 (1%)
 Frame = +2

Query: 86   IEMRTRNQSKRLSQDPSLDRS--EEDGGQEAEKEVP--------CNAPMPANVPHERKID 235
            +  R+ ++SK+      L  S  +  G QE +K V         C+     N   E    
Sbjct: 53   VNARSSSRSKKQDCAVGLTTSVLKVSGKQEVDKRVTWSDVDAHGCSRDAMGNTLRELDEG 112

Query: 236  ESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIRRAS 415
                  L   E+  +SDWEDG + V+ +   H ++  + + +EF D   S  KKP+RRAS
Sbjct: 113  RLQDNVLDGGEEMYDSDWEDGSIPVACSKENHPESDIKGVTIEF-DAADSVTKKPVRRAS 171

Query: 416  AEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTANDL 595
            AE+KELAELVHKVHLLCLLARGRL+DS C+DPL QASLLSL+P +LLK  E+ KLTAN L
Sbjct: 172  AEDKELAELVHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISEVSKLTANAL 231

Query: 596  TPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRFVC 775
            +PIV+WFH+NFHVRSS ++ + F   LA ALE+  GT EE+AALSV+LFRAL LTTRFV 
Sbjct: 232  SPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVS 291

Query: 776  ILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTYLNKTGPN 955
            ILDV SLKP+    AD + + NQ+ + +  GIFN+ TLMV +  +  +S P         
Sbjct: 292  ILDVASLKPE----ADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLAS-PVKSFSCDKK 346

Query: 956  GDIVNEMSHGVAS---QVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAICPTKK 1126
             ++    S G         +SN T           +  N +  +S A +D + A  P +K
Sbjct: 347  ENVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHPKEK 406

Query: 1127 TEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKRIKSEE 1306
            ++  KRKGDLEFE+Q+EMAL+AT    +                 +  P+ R+K+I+S E
Sbjct: 407  SQALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNSSTVL-PVKRLKKIESGE 465

Query: 1307 SPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFAC 1486
            S  S  GISTAVGSRK GAP YWAE++CSGENLTGKWVHVD  NAIIDGE K+EAA+ AC
Sbjct: 466  SSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAAC 525

Query: 1487 RKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGGMVHL 1666
            +  LRY+VAFAG GAKDVTRRYCMKWY+IASKRVNS WWDAVLAPL+ELESGATGGM  +
Sbjct: 526  KTSLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLRELESGATGGMTQM 585

Query: 1667 DIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSKTHDVN 1846
            ++   NASN  +  A K S   Y          SF   + LSG              D +
Sbjct: 586  EMRHVNASNTLE--ALKTSNYPYRD--------SFPNHVSLSG--------------DSD 621

Query: 1847 TNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILHPK 2026
             N +S  +   VA RNSLED+EL+TRALTEPLPTNQQAYKNH LY IERW NKYQIL+PK
Sbjct: 622  LNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPK 681

Query: 2027 GPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEPGV 2206
            GP+LG+CSGH VYPR+CVQ L+TK+RWL++ LQVKA+E P KV+K S K    Q  EP  
Sbjct: 682  GPILGFCSGHAVYPRSCVQTLKTKERWLQEALQVKATEVPVKVIKNSSKSNRGQDFEPED 741

Query: 2207 CEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPRVV 2386
             +E +  G+I LYGKWQ EPL LP AVNG+VP+NERGQVDVWSEKCLPPGTVHLRLPRV 
Sbjct: 742  YDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVY 801

Query: 2387 PVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXXXX 2566
             VAKRLEID APAMVGFEFRNGRS PVF+GIVVC EFKD I+                  
Sbjct: 802  SVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCVEFKDTILEAYAEEEEKREAEEKKRR 861

Query: 2567 XXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGAHI---SSFGDDRLSN 2737
              QA SRWYQLLSSI+TRQRLN  YG+ S+S    N Q   +  +++   SS  D +  N
Sbjct: 862  EAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNFQNVKKTNSNVGVDSSQNDWQSPN 921

Query: 2738 KCHEGLVS-KQNFKLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            +  +G            E+HEH++ IEDQSFDEENS  TKRC CGF +QVEEL
Sbjct: 922  QIDKGDTKLHAPSPAQSEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 974


>ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
            gi|557532630|gb|ESR43813.1| hypothetical protein
            CICLE_v10010990mg [Citrus clementina]
          Length = 974

 Score =  894 bits (2310), Expect = 0.0
 Identities = 503/955 (52%), Positives = 616/955 (64%), Gaps = 19/955 (1%)
 Frame = +2

Query: 86   IEMRTRNQSKRLSQDPSLDRS--EEDGGQEAEKEVP--------CNAPMPANVPHERKID 235
            +  R+ ++SK+      L  S  +  G QE +K V         C+     N   E    
Sbjct: 53   VNARSSSRSKKQDCAVGLPTSVLKVSGKQEVDKRVTWSDVDAHGCSRDAMGNTLREVDEG 112

Query: 236  ESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIRRAS 415
                  L   E+  +SDWEDG + V+ +   H ++  + + +EF D   S  KKP+RRAS
Sbjct: 113  RLQDNVLDGGEEMYDSDWEDGSIPVACSKENHPESDIKGVTIEF-DAADSVTKKPVRRAS 171

Query: 416  AEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTANDL 595
            AE+KELAELVHKVHLLCLLARGRL+DS C+DPL QASLLSL+P +LLK  E+ KLTAN L
Sbjct: 172  AEDKELAELVHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISEVSKLTANAL 231

Query: 596  TPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRFVC 775
            +PIV+WFH+NFHVRSS ++ + F   LA ALE+  GT EE+AALSV+LFRAL LTTRFV 
Sbjct: 232  SPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVS 291

Query: 776  ILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTYLNKTGPN 955
            ILDV SLKP+    AD + + NQ+ + +  GIFN+ TLMV +  +  +S P         
Sbjct: 292  ILDVASLKPE----ADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLAS-PVKSFSCDKK 346

Query: 956  GDIVNEMSHGVAS---QVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAICPTKK 1126
             ++    S G+        +SN T           +  N +  +S A +D + A  P +K
Sbjct: 347  ENVCETSSKGLPECKYSSPKSNNTQSKKSPVSCELSSRNLDPSSSMACSDISEACHPKEK 406

Query: 1127 TEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKRIKSEE 1306
            ++  KRKGDLEFE+Q+EMAL+AT    +                 + S + R+K+I+S E
Sbjct: 407  SQALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNSSTVLS-VKRLKKIESGE 465

Query: 1307 SPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFAC 1486
            S  S  GISTAVGSRK GAP YWAE++CSGENLTGKWVHVD  NAIIDGE K+EAA+ AC
Sbjct: 466  SSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAAC 525

Query: 1487 RKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGGMVHL 1666
            +  LRY+VAFAG GAKDVTRRYCMKWY+IA KRVNS WWDAVLAPL+ELESGATGGM  +
Sbjct: 526  KTSLRYIVAFAGCGAKDVTRRYCMKWYRIAPKRVNSAWWDAVLAPLRELESGATGGMTQM 585

Query: 1667 DIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSKTHDVN 1846
            +    NASN  +  A K S   Y          SF   + L G              D +
Sbjct: 586  EKRHVNASNILE--ALKTSNYPYRD--------SFPNHVSLYG--------------DSD 621

Query: 1847 TNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILHPK 2026
             N +S  +   VA RNSLED+EL+TRALTEPLPTNQQAYKNH LY IERW NKYQIL+PK
Sbjct: 622  LNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPK 681

Query: 2027 GPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEPGV 2206
            GP+LG+CSGH VYPR+CVQ L+TK+RWLR+ LQVKA+E P KV+K S K    Q  EP  
Sbjct: 682  GPILGFCSGHAVYPRSCVQTLKTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPED 741

Query: 2207 CEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPRVV 2386
             +E +  G+I LYGKWQ EPL LP AVNG+VP+NERGQVDVWSEKCLPPGTVHLRLPRV 
Sbjct: 742  YDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVY 801

Query: 2387 PVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXXXX 2566
             VAKRLEID APAMVGFEFRNGRS PVF+GIVVC EFKD I+                  
Sbjct: 802  SVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRR 861

Query: 2567 XXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGAHI---SSFGDDRLSN 2737
              QA SRWYQLLSSI+TRQRLN  YG+ S+S    N Q   +  +++   SS  D +  N
Sbjct: 862  EAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNFQNVKKTNSNVGVDSSQNDWQSPN 921

Query: 2738 KCHEG---LVSKQNFKLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            +   G   L +   F+   E+HEH++ IEDQSFDEENS  TKRC CGF +QVEEL
Sbjct: 922  QVDRGDTKLHAPSPFQ--SEEHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 974


>ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao]
            gi|508712018|gb|EOY03915.1| DNA repair protein xp-C /
            rad4, putative isoform 2 [Theobroma cacao]
          Length = 908

 Score =  883 bits (2281), Expect = 0.0
 Identities = 495/926 (53%), Positives = 605/926 (65%), Gaps = 16/926 (1%)
 Frame = +2

Query: 164  QEAEKEVPCNAPMPANVPHERKIDESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQ 343
            Q A     C+     +   E  +   V     + ED ++SDWEDG +   D  +     +
Sbjct: 4    QNASMAEGCSRNAVGSSQLEVDVGSYVDNLFDDSEDMNDSDWEDGSIPKLDPVDNSPKER 63

Query: 344  ARELIVEFSDLPSSSKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQA 523
             + L +EF +   S+ +KP+RRASAE+KE+AELVHKVHLLCLLARGRL+D+AC+DPL QA
Sbjct: 64   MKGLTIEFDEPSGSAGRKPVRRASAEDKEIAELVHKVHLLCLLARGRLIDNACDDPLIQA 123

Query: 524  SLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGG 703
            SLLSLVP HL K   +  +T+N L+P+V WFHNNFHVRS   + + F   LA ALE   G
Sbjct: 124  SLLSLVPTHLSKISGVSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETREG 183

Query: 704  TAEEVAALSVSLFRALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSS 883
            T EE+AALSV+LFRAL  T RFV ILDV SLKP+    AD     +Q  N +  GIF++S
Sbjct: 184  TPEEIAALSVALFRALKFTARFVSILDVASLKPE----ADKCEPSSQEANRVGGGIFSTS 239

Query: 884  TLMV-NRLSQASSSVPTY-LNKTGPNGDIVNEMSHGVASQVN--RSNLTSKAIHSTYMPA 1051
            TLMV N    +SSS P    + +  +G   N +     S+     SN T     +     
Sbjct: 240  TLMVANPKEVSSSSYPVKSFSCSEKDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEV 299

Query: 1052 TLLNDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXX 1231
            T    N+    A  D      PTK ++G KRKGDLEFE+Q+ MA++AT            
Sbjct: 300  TDRTSNLFACQAQLDTYGQCAPTK-SQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSL 358

Query: 1232 XXXXXXXXXXI--CSPLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENL 1405
                      +   +P  R K+I   ES  SSQG+STA+GSRK G+P +WAE++C GENL
Sbjct: 359  DVSNFNGNNSLDASTPSKRWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENL 418

Query: 1406 TGKWVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKR 1585
            TGKWVHVD +NAIIDGE K+E A+ AC+  LRYVVAFAG GAKDVTRRYCMKWYKIA KR
Sbjct: 419  TGKWVHVDALNAIIDGEQKVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKR 478

Query: 1586 VNSHWWDAVLAPLKELESGATGGMVHLDIHQDNASNQPQE-KASKMS---GSVYSSANET 1753
            VNS WWDAVLAPL+ELESGATGG ++++   +NASN+ ++ KAS MS   G+   S +  
Sbjct: 479  VNSIWWDAVLAPLRELESGATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVI 538

Query: 1754 VRGTSFQESIPLSGSPAAKLEIKQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALT 1933
            +   S QE+    GS   K E++ S  H +            VATRNSLED+EL+TRALT
Sbjct: 539  LPEKSGQEAFKEYGS---KSEVESSTKHSL------------VATRNSLEDMELETRALT 583

Query: 1934 EPLPTNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLR 2113
            EPLPTNQQAYKNH LYA+ERW  K QILHP+GP+LGYCSGHPVYPRTCVQ L+ ++RWLR
Sbjct: 584  EPLPTNQQAYKNHALYALERWLTKCQILHPRGPILGYCSGHPVYPRTCVQTLKPRERWLR 643

Query: 2114 DGLQVKASESPAKVVKRSLKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNG 2293
            +GLQVK +E PAKV+KRS K    Q  E    EE +  G+I LYGKWQ EPL LP AV+G
Sbjct: 644  EGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYEEIDSKGTIELYGKWQLEPLCLPHAVDG 703

Query: 2294 LVPKNERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFE 2473
            +VPKNERGQVDVWSEKCLPPGTVHLRLPRV  VAKRLEID+APAMVGFEFRNGR+ P+F+
Sbjct: 704  IVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSVAKRLEIDYAPAMVGFEFRNGRAAPIFD 763

Query: 2474 GIVVCTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGS 2653
            GIVVC+EFKDAI+                    QA+SRWYQLLSSIITRQ+L   YGDGS
Sbjct: 764  GIVVCSEFKDAILEAYAEEEERRVAEEKKRNEAQAISRWYQLLSSIITRQKLKSYYGDGS 823

Query: 2654 SSDIRDNHQ-KDDQRGAHISSFGDDRLSNKCHEG-----LVSKQNFKLTGEDHEHIFPIE 2815
            SS    N Q K+++  A   S  DDR S    +G     L +  +  L  EDHEH+F  E
Sbjct: 824  SSQASRNIQDKNNEINAPDESSKDDRQSTGLWKGDGEDTLCNIPSGTLV-EDHEHVFLRE 882

Query: 2816 DQSFDEENSTRTKRCRCGFLVQVEEL 2893
            ++SFD ENS RTKRC CGF +QVEEL
Sbjct: 883  NESFDAENSVRTKRCHCGFSIQVEEL 908


>ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao]
            gi|508712017|gb|EOY03914.1| DNA repair protein xp-C /
            rad4, putative isoform 1 [Theobroma cacao]
          Length = 974

 Score =  883 bits (2281), Expect = 0.0
 Identities = 495/926 (53%), Positives = 605/926 (65%), Gaps = 16/926 (1%)
 Frame = +2

Query: 164  QEAEKEVPCNAPMPANVPHERKIDESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQ 343
            Q A     C+     +   E  +   V     + ED ++SDWEDG +   D  +     +
Sbjct: 70   QNASMAEGCSRNAVGSSQLEVDVGSYVDNLFDDSEDMNDSDWEDGSIPKLDPVDNSPKER 129

Query: 344  ARELIVEFSDLPSSSKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQA 523
             + L +EF +   S+ +KP+RRASAE+KE+AELVHKVHLLCLLARGRL+D+AC+DPL QA
Sbjct: 130  MKGLTIEFDEPSGSAGRKPVRRASAEDKEIAELVHKVHLLCLLARGRLIDNACDDPLIQA 189

Query: 524  SLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGG 703
            SLLSLVP HL K   +  +T+N L+P+V WFHNNFHVRS   + + F   LA ALE   G
Sbjct: 190  SLLSLVPTHLSKISGVSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETREG 249

Query: 704  TAEEVAALSVSLFRALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSS 883
            T EE+AALSV+LFRAL  T RFV ILDV SLKP+    AD     +Q  N +  GIF++S
Sbjct: 250  TPEEIAALSVALFRALKFTARFVSILDVASLKPE----ADKCEPSSQEANRVGGGIFSTS 305

Query: 884  TLMV-NRLSQASSSVPTY-LNKTGPNGDIVNEMSHGVASQVN--RSNLTSKAIHSTYMPA 1051
            TLMV N    +SSS P    + +  +G   N +     S+     SN T     +     
Sbjct: 306  TLMVANPKEVSSSSYPVKSFSCSEKDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEV 365

Query: 1052 TLLNDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXX 1231
            T    N+    A  D      PTK ++G KRKGDLEFE+Q+ MA++AT            
Sbjct: 366  TDRTSNLFACQAQLDTYGQCAPTK-SQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSL 424

Query: 1232 XXXXXXXXXXI--CSPLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENL 1405
                      +   +P  R K+I   ES  SSQG+STA+GSRK G+P +WAE++C GENL
Sbjct: 425  DVSNFNGNNSLDASTPSKRWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENL 484

Query: 1406 TGKWVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKR 1585
            TGKWVHVD +NAIIDGE K+E A+ AC+  LRYVVAFAG GAKDVTRRYCMKWYKIA KR
Sbjct: 485  TGKWVHVDALNAIIDGEQKVEDAAAACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKR 544

Query: 1586 VNSHWWDAVLAPLKELESGATGGMVHLDIHQDNASNQPQE-KASKMS---GSVYSSANET 1753
            VNS WWDAVLAPL+ELESGATGG ++++   +NASN+ ++ KAS MS   G+   S +  
Sbjct: 545  VNSIWWDAVLAPLRELESGATGGTINMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVI 604

Query: 1754 VRGTSFQESIPLSGSPAAKLEIKQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALT 1933
            +   S QE+    GS   K E++ S  H +            VATRNSLED+EL+TRALT
Sbjct: 605  LPEKSGQEAFKEYGS---KSEVESSTKHSL------------VATRNSLEDMELETRALT 649

Query: 1934 EPLPTNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLR 2113
            EPLPTNQQAYKNH LYA+ERW  K QILHP+GP+LGYCSGHPVYPRTCVQ L+ ++RWLR
Sbjct: 650  EPLPTNQQAYKNHALYALERWLTKCQILHPRGPILGYCSGHPVYPRTCVQTLKPRERWLR 709

Query: 2114 DGLQVKASESPAKVVKRSLKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNG 2293
            +GLQVK +E PAKV+KRS K    Q  E    EE +  G+I LYGKWQ EPL LP AV+G
Sbjct: 710  EGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYEEIDSKGTIELYGKWQLEPLCLPHAVDG 769

Query: 2294 LVPKNERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFE 2473
            +VPKNERGQVDVWSEKCLPPGTVHLRLPRV  VAKRLEID+APAMVGFEFRNGR+ P+F+
Sbjct: 770  IVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSVAKRLEIDYAPAMVGFEFRNGRAAPIFD 829

Query: 2474 GIVVCTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGS 2653
            GIVVC+EFKDAI+                    QA+SRWYQLLSSIITRQ+L   YGDGS
Sbjct: 830  GIVVCSEFKDAILEAYAEEEERRVAEEKKRNEAQAISRWYQLLSSIITRQKLKSYYGDGS 889

Query: 2654 SSDIRDNHQ-KDDQRGAHISSFGDDRLSNKCHEG-----LVSKQNFKLTGEDHEHIFPIE 2815
            SS    N Q K+++  A   S  DDR S    +G     L +  +  L  EDHEH+F  E
Sbjct: 890  SSQASRNIQDKNNEINAPDESSKDDRQSTGLWKGDGEDTLCNIPSGTLV-EDHEHVFLRE 948

Query: 2816 DQSFDEENSTRTKRCRCGFLVQVEEL 2893
            ++SFD ENS RTKRC CGF +QVEEL
Sbjct: 949  NESFDAENSVRTKRCHCGFSIQVEEL 974


>ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
            gi|550340612|gb|EEE86385.2| hypothetical protein
            POPTR_0004s08580g [Populus trichocarpa]
          Length = 898

 Score =  878 bits (2269), Expect = 0.0
 Identities = 486/879 (55%), Positives = 585/879 (66%), Gaps = 3/879 (0%)
 Frame = +2

Query: 266  EDTDESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIRRASAEEKELAELV 445
            ++ D+ DWEDG  ++      H  +  RE+ +EFS+ P S+K+KPIRRA+AEEK LAELV
Sbjct: 101  QEMDDIDWEDGSSSILGHVKNHPGDGIREVTIEFSESPDSAKRKPIRRATAEEKGLAELV 160

Query: 446  HKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNN 625
            HKVHLLCLLARGR++D AC+DPL QASLLS++P HL   L  PKL A  L+P+ +WFHNN
Sbjct: 161  HKVHLLCLLARGRIIDHACDDPLIQASLLSILPAHLSNTLGDPKLHAKALSPLAHWFHNN 220

Query: 626  FHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRFVCILDVVSLKPD 805
            FHV SS +  + F   L+ ALE   GT EE+AALSV+LFRAL LTTRFV ILDV S+KP 
Sbjct: 221  FHVASSVSEKRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKP- 279

Query: 806  GKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTYLNKTGPNGDIVNEMSHG 985
               DAD   + +Q  + +  GIFN+STLMV+R  +    +P       P     NE  + 
Sbjct: 280  ---DADKYESLSQGTSKMHRGIFNTSTLMVDRPKEV--FIP-------PKSLSCNEKKNK 327

Query: 986  VASQVNRSNLTSKAIHSTYMPATLLNDNVLNS--SALNDETSAICPTKKTEGSKRKGDLE 1159
            + S             +   PA  L D ++++      + TS  C TKK++GSKRKGDLE
Sbjct: 328  IQS-------------NDSPPAVELKDKMVDTFPCEAQNNTSEECVTKKSQGSKRKGDLE 374

Query: 1160 FELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKRIKSEESPVSSQGISTA 1339
            FE+Q++MA++ATA  VA                 + SP  RI++I +EES  SSQGISTA
Sbjct: 375  FEMQLQMAMSATA--VATQSNKELDVKESSNSSDVSSPFKRIRKIANEES--SSQGISTA 430

Query: 1340 VGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFA 1519
            +GSRK G+P YWAE++CSGENLTGKWVHVD V+ I+DGE K+EAA+ AC+  LRYVVAFA
Sbjct: 431  LGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFA 490

Query: 1520 GHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGGMVHLDIHQDNASNQP 1699
            G GAKDVTRRYCMKWYKIAS+RVNS WWDAVLAPL+ELESGATGGM HL+    +ASN+ 
Sbjct: 491  GLGAKDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPHADASNE- 549

Query: 1700 QEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSKTHDVNTNSQSHTQGGR 1879
                                     E++  SG                  NS +      
Sbjct: 550  ------------------------HENVIASG-----------------LNSFA------ 562

Query: 1880 VATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCSGHP 2059
             ATRN++ED+ELQTRALTEPLPTNQQAYKNH LYAIE+W  K QILHPKGP+LG+CSGHP
Sbjct: 563  -ATRNTIEDMELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKGPILGFCSGHP 621

Query: 2060 VYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEPGVCEEANDDGSIA 2239
            VYPR CVQ L+TK+RWLR+GLQVK  E PAKVVK+S K    Q  E     E  D G + 
Sbjct: 622  VYPRACVQTLRTKERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDYGE-TDSGVVE 680

Query: 2240 LYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEIDFA 2419
            LYG WQ EPL LP AVNG+VPKNERGQVDVWSEKCLPPGTVHLRLPRV  VAKRLEID+A
Sbjct: 681  LYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYA 740

Query: 2420 PAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRWYQL 2599
            PAMVGFEFRNGRSVPVF+GIVVC EFKDAI+                    QA+SRWYQL
Sbjct: 741  PAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQL 800

Query: 2600 LSSIITRQRLNETYGDGSSSDIRDNHQK-DDQRGAHISSFGDDRLSNKCHEGLVSKQNFK 2776
            LSSIITRQRLN +YG+G    +  N Q  ++Q   H+ S           +  ++  +  
Sbjct: 801  LSSIITRQRLNNSYGNGLLPQMPSNVQNTNNQPDVHVGSTQPPGHQKDAKDRKLNAPSMT 860

Query: 2777 LTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            LT +DHEH+F +EDQSFDEE STRTKRC CGF VQVEEL
Sbjct: 861  LT-DDHEHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL 898


>gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus notabilis]
          Length = 962

 Score =  856 bits (2212), Expect = 0.0
 Identities = 484/926 (52%), Positives = 601/926 (64%), Gaps = 24/926 (2%)
 Frame = +2

Query: 188  CNAPMPANVPHERKIDESV--SCALPEKEDTDESDWEDGYVAVSD-TGNVHLDNQARELI 358
            C+     +   E K+D           +E+ ++SDWEDG +  SD TGN       +++ 
Sbjct: 83   CSTDAARDTLREEKVDGGTLQDPLSDSREEMNDSDWEDGSIPNSDFTGN-------QQVT 135

Query: 359  VEFSDLPSSSKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSL 538
            +EF + P   K+KP+ +A+AE+KELAE+VHKVHLLCLL RGRL+D AC+DPLTQA+LLSL
Sbjct: 136  IEFDETPDPVKRKPVHQATAEDKELAEIVHKVHLLCLLGRGRLIDRACDDPLTQAALLSL 195

Query: 539  VPRHLLKALEIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEV 718
            +PRHLL   ++ KLTA +L P+++WF +NFHVRSS++  +    NLA ALE H GT+EE+
Sbjct: 196  LPRHLLNISQMTKLTAKNLHPLIHWFQDNFHVRSSTDEKRSIHSNLAFALETHEGTSEEI 255

Query: 719  AALSVSLFRALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVN 898
            AALSV+LFRAL L TRFV ILDV SLKPDG    D SA  +Q+       IF +ST MV 
Sbjct: 256  AALSVALFRALGLITRFVSILDVASLKPDG----DKSAYFSQDAGGF---IFCTSTPMVA 308

Query: 899  RLSQASSSVPTYLNKTGPNG-DIVNEMSHGVASQVNRSNLTSKAI-----HSTYMPATLL 1060
            + ++ASSS     +   PN  D   E SH   S   RSN  SK        S   P  L+
Sbjct: 309  KKNEASSSPSKSFS---PNEKDSACETSH--RSSCKRSNAESKDSASANESSNKQPCPLV 363

Query: 1061 NDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXX 1240
             +       L  ++S  C T+ ++G KRKGD+EF LQMEMA++ATAA +A          
Sbjct: 364  FE-------LKHDSSGACHTQISQGPKRKGDIEFSLQMEMAISATAAVIANIADGKMGSS 416

Query: 1241 XXXXXXXI---CSPLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTG 1411
                   +    SP  R+K++ SE S  SS GISTA+GSR+ G+P YWAE++CSGENLTG
Sbjct: 417  MGNPNSNLPNFISPFKRMKKVLSEGSS-SSHGISTAIGSRRVGSPLYWAEVYCSGENLTG 475

Query: 1412 KWVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVN 1591
            KWVHVD VNAIID E K+EA + AC++ LRYVVAFAG+GAKDVTRRYCMKWYKIASKRVN
Sbjct: 476  KWVHVDAVNAIIDEEEKVEALAAACKRSLRYVVAFAGNGAKDVTRRYCMKWYKIASKRVN 535

Query: 1592 SHWWDAVLAPLKELESGATGGMVHLDIHQDNAS---NQPQEKASKMSGSVYSSANETVRG 1762
            S WWD+VLAPLKE+ES AT GM HL+    +AS   + P+  A            E ++ 
Sbjct: 536  SIWWDSVLAPLKEIESRATNGMFHLENDNIDASFKHDNPKHIA------------ENLKA 583

Query: 1763 TSFQESIPLSGSPAAKLEIKQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPL 1942
             +F  +  L GS   ++    SK   V T+  S       A+R+SLED+EL+TRALTEPL
Sbjct: 584  ENFPNNATLLGSSGLEV----SKVCGVKTDMGSSLTA---ASRSSLEDMELETRALTEPL 636

Query: 1943 PTNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGL 2122
            PTNQQAY+ H LYAIE+W NKYQILHP+GP+LG+C+GH VYPRTCVQ L+TK+RWLR+GL
Sbjct: 637  PTNQQAYRTHQLYAIEKWLNKYQILHPRGPILGFCAGHAVYPRTCVQTLKTKERWLREGL 696

Query: 2123 QVKASESPAKVVKRSLKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVP 2302
            QVKASE P K +KRS K    ++ E       N +G++ LYGKWQ EPL LP AVNG+VP
Sbjct: 697  QVKASELPVKELKRSGKLQKLKSFEDDESVGDNSEGTLKLYGKWQLEPLQLPHAVNGIVP 756

Query: 2303 KNERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIV 2482
            KNERGQVDVWSEKCLPPGT HLRLPRV  VAKRLEID+APAMVGFE++NG+S PVFEGIV
Sbjct: 757  KNERGQVDVWSEKCLPPGTAHLRLPRVFSVAKRLEIDYAPAMVGFEYKNGQSYPVFEGIV 816

Query: 2483 VCTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDG-SSS 2659
            VC EFKD I+                    QA+SRWYQLLSSI+T+QRL   YG G  S 
Sbjct: 817  VCAEFKDVILEAYREEQERREAEEKKRNEMQAISRWYQLLSSIVTQQRLKNRYGKGVLSH 876

Query: 2660 DIRDNHQKDDQRGAHISSFGDDRLSNKCHEGLVSKQNFKLTG--------EDHEHIFPIE 2815
               D    D+     +S   DD+ S +  +G   K               EDH+H+F  E
Sbjct: 877  TSSDEPTVDNNLSLKVSGSQDDKQSLEFRKGNKHKNKPNPPSRSPSAELEEDHKHLFLTE 936

Query: 2816 DQSFDEENSTRTKRCRCGFLVQVEEL 2893
            DQSFD+E    TKRC CGF VQVEEL
Sbjct: 937  DQSFDDETLILTKRCHCGFSVQVEEL 962


>ref|XP_007217691.1| hypothetical protein PRUPE_ppa001034mg [Prunus persica]
            gi|462413841|gb|EMJ18890.1| hypothetical protein
            PRUPE_ppa001034mg [Prunus persica]
          Length = 927

 Score =  816 bits (2107), Expect = 0.0
 Identities = 460/907 (50%), Positives = 573/907 (63%), Gaps = 13/907 (1%)
 Frame = +2

Query: 212  VPHERKID-ESVSCALPE-KEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSS 385
            V  E K+D ES  C+  + KE+ D++DWEDG V + ++   H      E+ +E ++ P S
Sbjct: 87   VSWEEKVDRESFQCSFTDTKEELDDADWEDGPVPILNSVGDH------EVTIELNETPDS 140

Query: 386  SKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKAL 565
            +++K IRRASAE+KELAELVHKVHLLCLLARGRL+D AC+D L QA+LLSL+P HLL   
Sbjct: 141  TRRKRIRRASAEDKELAELVHKVHLLCLLARGRLIDRACDDALIQATLLSLLPVHLLHIS 200

Query: 566  EIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFR 745
            ++ K T  DL P+V WF NNF VRS+S S K F   L  ALE H GT EE+AALSV+LFR
Sbjct: 201  KVAKPTVKDLRPLVFWFQNNFRVRSTSVS-KSFYSALTFALETHEGTQEEIAALSVALFR 259

Query: 746  ALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSV 925
            ALNLTTRFV ILDV SLKPD    AD +   +++ +  + GIF++ST MV R    S S+
Sbjct: 260  ALNLTTRFVSILDVASLKPD----ADKTEYSSEDASRSSRGIFSTSTPMVARKQDVSVSL 315

Query: 926  ---PTYLNKTGPNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMPATLLNDNVLNSSAL-- 1090
               P+   +    G                +N   K   + Y     +ND +L++ A   
Sbjct: 316  GKSPSCNERDNVCGTSQMGSCRSKDCHPTSNNTPPKGSCNAYE----VNDRMLDTLACGA 371

Query: 1091 NDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICS 1270
            + + S     KK++G KR+GDLEFE+Q++MAL+ATA   A                   S
Sbjct: 372  HHDISEAVLNKKSQGLKRRGDLEFEMQLKMALSATAVPTADREMGSGVNYLNGNENFSYS 431

Query: 1271 PLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIID 1450
               R+KRI SEES  SSQ ISTAVGSRK G+P YWAE++C GENLTGKWVH+D +NAIID
Sbjct: 432  --KRMKRIVSEESRNSSQSISTAVGSRKVGSPLYWAEVYCKGENLTGKWVHIDAINAIID 489

Query: 1451 GEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKE 1630
            GE  +EA + AC+  LRY VAFAG+GAKDVTRRYC+KWY+IAS+RVNS WWDAVLAPL++
Sbjct: 490  GEQNVEALAAACKTSLRYAVAFAGNGAKDVTRRYCLKWYQIASQRVNSIWWDAVLAPLRD 549

Query: 1631 LESGATGGMVHLD-IHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAA 1807
             E  AT G VHL+  H  ++S   Q K+  +S                            
Sbjct: 550  FEVTATSGSVHLEKEHTGSSSGHEQAKSLNISDRAV------------------------ 585

Query: 1808 KLEIKQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAI 1987
                                    +ATRNSLED+EL+T+ALTEPLPTNQQAYKNH LYAI
Sbjct: 586  ------------------------IATRNSLEDMELETKALTEPLPTNQQAYKNHQLYAI 621

Query: 1988 ERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRS 2167
            E+W NK Q+LHPKGP++G+CSGHPVYPRTCVQ L+T++RWLR+GLQVK +E P K +KRS
Sbjct: 622  EKWLNKDQVLHPKGPIVGFCSGHPVYPRTCVQTLKTRERWLREGLQVKINEHPVKELKRS 681

Query: 2168 LKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCL 2347
             K    Q  E       N   +I LYGKWQ EPLDLP AVNG+VPKN+ G V+VWSEKCL
Sbjct: 682  SKVHKVQDPESDNYVGGNSKRTIELYGKWQLEPLDLPHAVNGIVPKNDHGNVEVWSEKCL 741

Query: 2348 PPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXX 2527
            PPGT+HLRLPRV  VAKRLEID+APAMVGFEF+NG+S PVF+GIVVC EF DAI+     
Sbjct: 742  PPGTMHLRLPRVFYVAKRLEIDYAPAMVGFEFKNGQSYPVFDGIVVCAEFGDAIVEAYAE 801

Query: 2528 XXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGSSSDIR-DNHQKDDQRGAH 2704
                           QA+SRWYQLLSS++TRQRL   YGD SSS         + +    
Sbjct: 802  EEERREAVEKKRNEMQAISRWYQLLSSVVTRQRLENLYGDSSSSVASVSTKSVNGKLDVQ 861

Query: 2705 ISSFGDDRLSNKC----HEGLVSKQNFKLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGF 2872
            +    +D  S  C    HE   +  +  +  E+HEH+F  E+QSFDE+N   T+RC CGF
Sbjct: 862  VDGSPNDEQSLACQQDVHENRPAGPSAAMP-ENHEHVFLTENQSFDEDNLVVTRRCHCGF 920

Query: 2873 LVQVEEL 2893
             VQVEEL
Sbjct: 921  TVQVEEL 927


>ref|XP_006596501.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Glycine max]
          Length = 915

 Score =  806 bits (2082), Expect = 0.0
 Identities = 455/922 (49%), Positives = 562/922 (60%), Gaps = 20/922 (2%)
 Frame = +2

Query: 188  CNAPMPANVPHERKIDESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEF 367
            C      N   E K   S       KE+ D+SDWEDG VA  D            + +E 
Sbjct: 86   CGRNSMENASAEEKCGNSGLHCFDNKEELDDSDWEDGTVARDD----------HPVTIEL 135

Query: 368  SDLPSSSKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPR 547
            +    S+ +K IRRASAE+K+LAELVHK+HLLCLLARGRL+D+AC+DPL QASLLSL+P 
Sbjct: 136  NMTAHSTVQKQIRRASAEDKDLAELVHKIHLLCLLARGRLIDNACDDPLIQASLLSLLPA 195

Query: 548  HLLKALEIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAAL 727
             LL+   + KLT+N L P+++WFH+NFHV++ +N        LASALE+H G++EE+AAL
Sbjct: 196  QLLQLSNVTKLTSNALYPLISWFHDNFHVKNCTNRETSPHFGLASALESHEGSSEEIAAL 255

Query: 728  SVSLFRALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLS 907
            SV+L RALNLT RFV ILDV  LKP   Q A  S+N          GIF +ST M+++  
Sbjct: 256  SVALLRALNLTARFVSILDVAPLKP--VQVASGSSN----------GIFKTSTPMISKRK 303

Query: 908  QASSSVPTYLNKTGPNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMPAT-LLNDNVLNSS 1084
                S    ++         + + H   S+  + + T+    S+  P   + ND+V NS 
Sbjct: 304  LDFKSPQESISCNEIENVCESSLVHSRKSK--KCHATNHTDQSSDPPVVDVRNDSVANSK 361

Query: 1085 A--LNDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXX 1258
            A    D  S +C T K+  SKRKGD+EFE+Q+EMAL+AT  E                  
Sbjct: 362  ASETRDSNSELCLTDKSHKSKRKGDIEFEMQLEMALSATTVECKDSKTEASANPDSSS-- 419

Query: 1259 XICSPLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVN 1438
                P  R+KR+  E+S  S Q ISTA+GS K G+P YWAE++CS ENLTGKWVHVD +N
Sbjct: 420  -FSCPSKRVKRVIGEDSSTSPQVISTAIGSMKVGSPLYWAEVYCSEENLTGKWVHVDALN 478

Query: 1439 AIIDGEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLA 1618
             IIDGE K+E+   AC+  LRYVVAFAG GAKDVTRRYCMKWYKIAS RVNS WWD+VL 
Sbjct: 479  LIIDGEDKVESMVAACKTSLRYVVAFAGQGAKDVTRRYCMKWYKIASHRVNSTWWDSVLK 538

Query: 1619 PLKELESGATGGMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGS 1798
            PL++LESGATGG+ HL       +NQ     S M+ SV                      
Sbjct: 539  PLRDLESGATGGVAHL------GTNQIISTESNMNDSV---------------------- 570

Query: 1799 PAAKLEIKQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPL 1978
                                       V TR+S+ED+EL+TRALTEPLPTNQQAYK+HPL
Sbjct: 571  ---------------------------VPTRSSIEDIELETRALTEPLPTNQQAYKSHPL 603

Query: 1979 YAIERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVV 2158
            YAIE+W  KYQ+LHPKGPVLG+CSGHPVYPRTCVQ ++TK+RWLR+GLQVK +E P K +
Sbjct: 604  YAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTKERWLREGLQVKPNEHPVKDL 663

Query: 2159 KRSLKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSE 2338
            +RS+KP   Q  E       +    I LYGKWQ EPL+LP AVNG+VPKNERGQVDVWSE
Sbjct: 664  QRSMKPQKVQDSEADDYGCTDSIEQIKLYGKWQLEPLNLPHAVNGIVPKNERGQVDVWSE 723

Query: 2339 KCLPPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXX 2518
            KCLPPGTVHLR P+   VAKRLEID+APAMVGFEF+NGRS PVF+GIVVC EFKD ++  
Sbjct: 724  KCLPPGTVHLRFPKAFSVAKRLEIDYAPAMVGFEFKNGRSYPVFDGIVVCAEFKDVLLEA 783

Query: 2519 XXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETY-----------------GD 2647
                              QALSRWYQLLSSI+TRQRLN  Y                  D
Sbjct: 784  YAEEEERRQAEEKKRDETQALSRWYQLLSSIVTRQRLNNRYINNSLSSDKLTGVLCINND 843

Query: 2648 GSSSDIRDNHQKDDQRGAHISSFGDDRLSNKCHEGLVSKQNFKLTGEDHEHIFPIEDQSF 2827
             SS+ + DN+ K   +         D+  +KC   +    +   + +DHEH+F  E +SF
Sbjct: 844  ESSATVCDNNDKSPNQ--------RDQQVDKCDTNV--DVSLSTSVKDHEHVFLKEYESF 893

Query: 2828 DEENSTRTKRCRCGFLVQVEEL 2893
            DE  S  TKRC+CGF VQVEEL
Sbjct: 894  DEGTSLLTKRCQCGFSVQVEEL 915


>ref|XP_003544368.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Glycine max]
          Length = 926

 Score =  806 bits (2082), Expect = 0.0
 Identities = 455/922 (49%), Positives = 562/922 (60%), Gaps = 20/922 (2%)
 Frame = +2

Query: 188  CNAPMPANVPHERKIDESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEF 367
            C      N   E K   S       KE+ D+SDWEDG VA  D            + +E 
Sbjct: 97   CGRNSMENASAEEKCGNSGLHCFDNKEELDDSDWEDGTVARDD----------HPVTIEL 146

Query: 368  SDLPSSSKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPR 547
            +    S+ +K IRRASAE+K+LAELVHK+HLLCLLARGRL+D+AC+DPL QASLLSL+P 
Sbjct: 147  NMTAHSTVQKQIRRASAEDKDLAELVHKIHLLCLLARGRLIDNACDDPLIQASLLSLLPA 206

Query: 548  HLLKALEIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAAL 727
             LL+   + KLT+N L P+++WFH+NFHV++ +N        LASALE+H G++EE+AAL
Sbjct: 207  QLLQLSNVTKLTSNALYPLISWFHDNFHVKNCTNRETSPHFGLASALESHEGSSEEIAAL 266

Query: 728  SVSLFRALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLS 907
            SV+L RALNLT RFV ILDV  LKP   Q A  S+N          GIF +ST M+++  
Sbjct: 267  SVALLRALNLTARFVSILDVAPLKP--VQVASGSSN----------GIFKTSTPMISKRK 314

Query: 908  QASSSVPTYLNKTGPNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMPAT-LLNDNVLNSS 1084
                S    ++         + + H   S+  + + T+    S+  P   + ND+V NS 
Sbjct: 315  LDFKSPQESISCNEIENVCESSLVHSRKSK--KCHATNHTDQSSDPPVVDVRNDSVANSK 372

Query: 1085 A--LNDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXX 1258
            A    D  S +C T K+  SKRKGD+EFE+Q+EMAL+AT  E                  
Sbjct: 373  ASETRDSNSELCLTDKSHKSKRKGDIEFEMQLEMALSATTVECKDSKTEASANPDSSS-- 430

Query: 1259 XICSPLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVN 1438
                P  R+KR+  E+S  S Q ISTA+GS K G+P YWAE++CS ENLTGKWVHVD +N
Sbjct: 431  -FSCPSKRVKRVIGEDSSTSPQVISTAIGSMKVGSPLYWAEVYCSEENLTGKWVHVDALN 489

Query: 1439 AIIDGEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLA 1618
             IIDGE K+E+   AC+  LRYVVAFAG GAKDVTRRYCMKWYKIAS RVNS WWD+VL 
Sbjct: 490  LIIDGEDKVESMVAACKTSLRYVVAFAGQGAKDVTRRYCMKWYKIASHRVNSTWWDSVLK 549

Query: 1619 PLKELESGATGGMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGS 1798
            PL++LESGATGG+ HL       +NQ     S M+ SV                      
Sbjct: 550  PLRDLESGATGGVAHL------GTNQIISTESNMNDSV---------------------- 581

Query: 1799 PAAKLEIKQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPL 1978
                                       V TR+S+ED+EL+TRALTEPLPTNQQAYK+HPL
Sbjct: 582  ---------------------------VPTRSSIEDIELETRALTEPLPTNQQAYKSHPL 614

Query: 1979 YAIERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVV 2158
            YAIE+W  KYQ+LHPKGPVLG+CSGHPVYPRTCVQ ++TK+RWLR+GLQVK +E P K +
Sbjct: 615  YAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTKERWLREGLQVKPNEHPVKDL 674

Query: 2159 KRSLKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSE 2338
            +RS+KP   Q  E       +    I LYGKWQ EPL+LP AVNG+VPKNERGQVDVWSE
Sbjct: 675  QRSMKPQKVQDSEADDYGCTDSIEQIKLYGKWQLEPLNLPHAVNGIVPKNERGQVDVWSE 734

Query: 2339 KCLPPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXX 2518
            KCLPPGTVHLR P+   VAKRLEID+APAMVGFEF+NGRS PVF+GIVVC EFKD ++  
Sbjct: 735  KCLPPGTVHLRFPKAFSVAKRLEIDYAPAMVGFEFKNGRSYPVFDGIVVCAEFKDVLLEA 794

Query: 2519 XXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETY-----------------GD 2647
                              QALSRWYQLLSSI+TRQRLN  Y                  D
Sbjct: 795  YAEEEERRQAEEKKRDETQALSRWYQLLSSIVTRQRLNNRYINNSLSSDKLTGVLCINND 854

Query: 2648 GSSSDIRDNHQKDDQRGAHISSFGDDRLSNKCHEGLVSKQNFKLTGEDHEHIFPIEDQSF 2827
             SS+ + DN+ K   +         D+  +KC   +    +   + +DHEH+F  E +SF
Sbjct: 855  ESSATVCDNNDKSPNQ--------RDQQVDKCDTNV--DVSLSTSVKDHEHVFLKEYESF 904

Query: 2828 DEENSTRTKRCRCGFLVQVEEL 2893
            DE  S  TKRC+CGF VQVEEL
Sbjct: 905  DEGTSLLTKRCQCGFSVQVEEL 926


>ref|XP_004155756.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
            sativus]
          Length = 923

 Score =  803 bits (2075), Expect = 0.0
 Identities = 449/924 (48%), Positives = 570/924 (61%), Gaps = 14/924 (1%)
 Frame = +2

Query: 164  QEAEKEVPCNAPMPANVPHERKIDESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQ 343
            +   + V  +     +VP E  +  SVS  L   ED D+SDWEDG V   D        +
Sbjct: 82   ERCNENVIASCSEDVDVP-EVNLQNSVSEVL---EDLDDSDWEDGCVRPLD------GTE 131

Query: 344  ARELIVEFSDL---PSSSKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPL 514
            ++ L +E S++   P S+K+KPIRRASA +KE+AE VHKVHLLCLL RGRL+D ACNDPL
Sbjct: 132  SQPLTIEISEIQEIPDSTKRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPL 191

Query: 515  TQASLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALEN 694
             QA+LLSL+P HLLK     +LTA  L P+V W H+NFHVR+ + S       LA ALE 
Sbjct: 192  IQAALLSLLPAHLLKISPAKQLTATSLKPLVAWLHDNFHVRNQARSEGSINSALAHALET 251

Query: 695  HGGTAEEVAALSVSLFRALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIF 874
            H GT+EE+AAL+V LFRAL++T RFV ILDV  +KP+ ++    S +  ++  +    IF
Sbjct: 252  HEGTSEEIAALTVVLFRALDITARFVSILDVAPIKPEAERSKCFSQDIGRSSRN----IF 307

Query: 875  NSSTLMVNRLSQASSSVPTYLNKTGPNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMPAT 1054
             +STLMV++         T  ++     D   + + G   + N  NL  K  H       
Sbjct: 308  KNSTLMVDKAEAVDKDSLT--SRCLDKKDNPRKRTSGDNRESNAVNLVGKKTHVL----N 361

Query: 1055 LLNDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXX 1234
             L+    +S     + S   P K ++  KRKGD+EFE+Q++MAL+ATA E          
Sbjct: 362  ALSSTGSSSCNSKPDISETFPPKNSQVQKRKGDIEFEMQLQMALSATAVETMPSNSSINH 421

Query: 1235 XXXXXXXXXICSPLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGK 1414
                        P  ++KRI +EES  SS GISTAVGS K G+P YWAE++C+ ENLTGK
Sbjct: 422  LNEPPLNFP---PSKKLKRIVNEES-ASSHGISTAVGSSKEGSPLYWAEVYCNAENLTGK 477

Query: 1415 WVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNS 1594
            WVH+D VN ++DGE K+E  + AC+  LRYVVAF+G GAKDVTRRYCMKWYKI +KRVN+
Sbjct: 478  WVHIDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNN 537

Query: 1595 HWWDAVLAPLKELESGATGGMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQ 1774
             WWD VLAPL+ LE  A                                    VRGT   
Sbjct: 538  LWWDNVLAPLRILEGQA------------------------------------VRGTGKS 561

Query: 1775 ESIPLSGSPAAKLEIKQSKTHDVN---TNSQSHTQGGRVATRNSLEDVELQTRALTEPLP 1945
            +                   H+V+      +  + G +VATR+ LED+EL+TRALTEPLP
Sbjct: 562  D-------------------HNVSEGLVTDRDFSLGNQVATRDHLEDIELETRALTEPLP 602

Query: 1946 TNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQ 2125
            TNQQAYKNH LYA+E+W  KYQILHPKGPVLG+CSG+PVYPRTCVQ+L+TK +WLR+GLQ
Sbjct: 603  TNQQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKHKWLREGLQ 662

Query: 2126 VKASESPAKVVKRSLKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPK 2305
            V+++E P K +KRS+K +     E    ++ +  G+I LYGKWQ EPL LP AV+G+VPK
Sbjct: 663  VRSNELPVKELKRSIKKIKILESEADDFDQGDSQGTIPLYGKWQLEPLQLPRAVDGIVPK 722

Query: 2306 NERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVV 2485
            NERGQVDVWSEKCLPPGTVH+RLPRV  VAK+LEID+APAMVGFEFRNGRS P+++GIVV
Sbjct: 723  NERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPAMVGFEFRNGRSYPIYDGIVV 782

Query: 2486 CTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGS---- 2653
            C+EFKD I+                    QA+SRWYQLLSSIITRQRLN  YGD      
Sbjct: 783  CSEFKDVILETYNEEAERMEAEERRLREKQAISRWYQLLSSIITRQRLNSRYGDSENLSQ 842

Query: 2654 -SSDIRDNHQKDDQRGAHISSFGDDRLSNKCHEGLVSKQNF---KLTGEDHEHIFPIEDQ 2821
             +SDIRD H   D+R A + S  +D    K     +S  N        +DH+H+F +EDQ
Sbjct: 843  VTSDIRDMH---DERNADVPSCQEDVEPFKGQPDNLSNTNMDAPSFINQDHKHVFLLEDQ 899

Query: 2822 SFDEENSTRTKRCRCGFLVQVEEL 2893
             FDE++   TKRC CGF VQVEEL
Sbjct: 900  IFDEKSLVVTKRCHCGFSVQVEEL 923


>ref|XP_004140360.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
            sativus]
          Length = 923

 Score =  801 bits (2070), Expect = 0.0
 Identities = 448/924 (48%), Positives = 570/924 (61%), Gaps = 14/924 (1%)
 Frame = +2

Query: 164  QEAEKEVPCNAPMPANVPHERKIDESVSCALPEKEDTDESDWEDGYVAVSDTGNVHLDNQ 343
            +   + V  +     +VP E  +  SVS  L   ED D+SDWEDG V   D        +
Sbjct: 82   ERCNENVIASCSEDVDVP-EVNLQNSVSEVL---EDLDDSDWEDGCVRPLD------GTE 131

Query: 344  ARELIVEFSDL---PSSSKKKPIRRASAEEKELAELVHKVHLLCLLARGRLVDSACNDPL 514
            ++ L +E S++   P S+K+KPIRRASA +KE+AE VHKVHLLCLL RGRL+D ACNDPL
Sbjct: 132  SQPLTIEISEIQEIPDSTKRKPIRRASAADKEIAEFVHKVHLLCLLGRGRLIDRACNDPL 191

Query: 515  TQASLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALEN 694
             QA+LLSL+P HLLK     +LTA  L P+V W H+NFHVR+ + S       LA ALE 
Sbjct: 192  IQAALLSLLPAHLLKISPAKQLTATSLKPLVAWLHDNFHVRNQARSEGSINSALAHALET 251

Query: 695  HGGTAEEVAALSVSLFRALNLTTRFVCILDVVSLKPDGKQDADMSANPNQNENSLATGIF 874
            H GT+EE+AAL+V LFRAL++T RFV ILDV  +KP+ ++    S +  ++  +    IF
Sbjct: 252  HEGTSEEIAALTVVLFRALDITARFVSILDVAPIKPEAERSKCFSQDIGRSSRN----IF 307

Query: 875  NSSTLMVNRLSQASSSVPTYLNKTGPNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMPAT 1054
             +STLMV++         T  ++     D   + + G   + N  NL  K  H       
Sbjct: 308  KNSTLMVDKAEAVDKDSLT--SRCLDKKDNPRKRTSGDNRESNAVNLVGKKTHVL----N 361

Query: 1055 LLNDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXX 1234
             L+    +S     + S   P K ++  KRKGD+EFE+Q++MAL+ATA E          
Sbjct: 362  ALSSTGSSSCNSKPDISETFPPKNSQVQKRKGDIEFEMQLQMALSATAVETMPSNSSINH 421

Query: 1235 XXXXXXXXXICSPLNRIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGK 1414
                        P  ++KRI +EES  SS GISTAVGS K G+P YWAE++C+ ENLTGK
Sbjct: 422  LNEPPLNFP---PSKKLKRIVNEES-ASSHGISTAVGSSKEGSPLYWAEVYCNAENLTGK 477

Query: 1415 WVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNS 1594
            WVH+D VN ++DGE K+E  + AC+  LRYVVAF+G GAKDVTRRYCMKWYKI +KRVN+
Sbjct: 478  WVHIDAVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNT 537

Query: 1595 HWWDAVLAPLKELESGATGGMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQ 1774
             WWD VLAPL+ LE  A                                    VRGT   
Sbjct: 538  LWWDNVLAPLRILEGQA------------------------------------VRGTGKS 561

Query: 1775 ESIPLSGSPAAKLEIKQSKTHDVN---TNSQSHTQGGRVATRNSLEDVELQTRALTEPLP 1945
            +                   H+V+      +  + G +VATR+ LED+EL+TRALTEPLP
Sbjct: 562  D-------------------HNVSEGLVTDRDFSLGNQVATRDHLEDIELETRALTEPLP 602

Query: 1946 TNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQ 2125
            TNQQAYKNH LYA+E+W  KYQILHPKGPVLG+CSG+PVYPRTCVQ+L+TK +WLR+GLQ
Sbjct: 603  TNQQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCVQVLKTKHKWLREGLQ 662

Query: 2126 VKASESPAKVVKRSLKPVNAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPK 2305
            V+++E P K +KRS+K +     E    ++ +  G+I LYGKWQ EPL LP AV+G+VPK
Sbjct: 663  VRSNELPVKELKRSIKKIKILESEADDFDQGDSQGTIPLYGKWQLEPLQLPRAVDGIVPK 722

Query: 2306 NERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVV 2485
            NERGQVDVWSEKCLPPGTVH+RLPRV  VAK+LEID+APAMVGFEFRNGRS P+++GIVV
Sbjct: 723  NERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPAMVGFEFRNGRSYPIYDGIVV 782

Query: 2486 CTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGS---- 2653
            C+EFKD I+                    QA+SRWYQLLSSIITRQRLN  YGD      
Sbjct: 783  CSEFKDVILETYNEEAERMEAEERRLREKQAISRWYQLLSSIITRQRLNSRYGDSENLSQ 842

Query: 2654 -SSDIRDNHQKDDQRGAHISSFGDDRLSNKCHEGLVSKQNF---KLTGEDHEHIFPIEDQ 2821
             +SDIR+ H   D+R A + S  +D    K     +S  N        +DH+H+F +EDQ
Sbjct: 843  VTSDIRNMH---DERNADVPSCQEDVEPFKGQPDNLSNTNMDAPSFINQDHKHVFLLEDQ 899

Query: 2822 SFDEENSTRTKRCRCGFLVQVEEL 2893
             FDE++   TKRC CGF VQVEEL
Sbjct: 900  IFDEKSLVVTKRCHCGFSVQVEEL 923


>ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [Amborella trichopoda]
            gi|548831341|gb|ERM94149.1| hypothetical protein
            AMTR_s00010p00163020 [Amborella trichopoda]
          Length = 918

 Score =  793 bits (2049), Expect = 0.0
 Identities = 458/897 (51%), Positives = 567/897 (63%), Gaps = 27/897 (3%)
 Frame = +2

Query: 284  DWEDGYVAVSDTGNVHL-DNQARELIVEFSDLPSSSKKKPIRRASAEEKELAELVHKVHL 460
            DWEDG ++ S+T    + +   +E+IVEFS  PSS+K++ +RR SA +KEL ELVHKVHL
Sbjct: 60   DWEDGNISFSNTEVPCIPETLEQEVIVEFSGTPSSAKRQNVRRISAIDKELVELVHKVHL 119

Query: 461  LCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNNFHVRS 640
            LCLLARGRLVD+AC+DPL QASLLSL+P HLLK  E+ KLTA+ L P+V WF  NFHVR+
Sbjct: 120  LCLLARGRLVDAACDDPLIQASLLSLLPPHLLKISEVQKLTADLLVPLVEWFRANFHVRN 179

Query: 641  SSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRFVCILDVVSLKPDGKQDA 820
             S    PFK +LA+A+E   GT EEVAALSV+LFRALNL+TRF+ +LDV SLKPD  Q  
Sbjct: 180  ESIEKMPFKESLAAAIETREGTPEEVAALSVALFRALNLSTRFLAMLDVTSLKPDADQAV 239

Query: 821  DMSANPNQNENSLATGIFNSSTLMVNRLSQ-ASSSVPTYLNKTGPNGDIVNEMSHGVASQ 997
              S    + ++S+    FNSS  + N     A  S    L+K   N DI           
Sbjct: 240  YSSP---EADDSVKGRTFNSSRPIANLGDVFAKLSPQASLHKRKLNEDIGLTSPQNEGKH 296

Query: 998  VNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFELQME 1177
            +  ++ +SK   + Y                +D  S    T   + SKRKGD+EFELQME
Sbjct: 297  IKENDTSSKDKRTGYKS--------------SDAHSCNLETNHFKVSKRKGDVEFELQME 342

Query: 1178 MALTATAAEVAXXXXXXXXXXXXXXXXXICSPLN-RIKRIKSEESPVSSQGISTAVGSRK 1354
            MAL+ATAA V                    S LN + K++KSE   V S+  S AV SRK
Sbjct: 343  MALSATAAGVFESKVEQEMQQKPHSSSTTNSKLNIKEKKLKSE---VISERNSFAVWSRK 399

Query: 1355 TGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFAGHGAK 1534
             G P YWAE++C+GE L+G+WVHVD  N+I+DGE K+EAA  ACR+ LRYVVAF+G GAK
Sbjct: 400  MGPPLYWAEVYCNGETLSGRWVHVDAANSIVDGEHKVEAAVAACRRSLRYVVAFSGRGAK 459

Query: 1535 DVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATG-GMVHLDIH-QDNASN----- 1693
            DVTRRYCM+WY IAS+R++S WW AVL+PLKELES A G  ++HLD+   DNA       
Sbjct: 460  DVTRRYCMRWYTIASQRIDSEWWSAVLSPLKELESRAGGSNVMHLDVPLTDNAVEVKEGS 519

Query: 1694 -----QPQEKASKMSGSVYSSANE---TVRGTSFQESIP---LSGSPAAKLEIKQSKTHD 1840
                  P+    + SG V  S           + +E  P    S +      + +  +  
Sbjct: 520  GRACVSPEAHLKEGSGRVCVSPEAHHIEENSEALKEKTPQDIFSSADGLGAGVSRHASSS 579

Query: 1841 VNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILH 2020
            +N    S         R +LED+EL+TRALTEPLP+NQ AYKNHPLY IERW  +YQ+L+
Sbjct: 580  INIEPVS---------RGALEDMELETRALTEPLPSNQLAYKNHPLYTIERWLTRYQVLY 630

Query: 2021 PKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEP 2200
            PKGPVLGYCSGHPVYPR CVQ L TK+RWL +GLQVK +ESPAKVVKRS K       E 
Sbjct: 631  PKGPVLGYCSGHPVYPRICVQTLHTKERWLCEGLQVKENESPAKVVKRSRKVNKVHTSEH 690

Query: 2201 GVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPR 2380
            G   +   +G+IALYGKWQTE L+LP AV+G+VPKNERGQVDVWSEKCLPPGTVHLR PR
Sbjct: 691  GSTVDGG-EGTIALYGKWQTEVLNLPPAVDGMVPKNERGQVDVWSEKCLPPGTVHLRFPR 749

Query: 2381 VVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXX 2560
            +VPVAKRL +DFAPAMVGFEFRNG S+PV+EGIV C EFKDAI+                
Sbjct: 750  LVPVAKRLGVDFAPAMVGFEFRNGCSIPVYEGIVACAEFKDAILEAYAEVEERREEEEKK 809

Query: 2561 XXXXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGAHISSFGDDRLSNK 2740
                QAL+RWYQLL S ITRQRL  +Y   SSS +  N        A I + GDD  ++ 
Sbjct: 810  RMEAQALTRWYQLLFSFITRQRLKRSYETPSSSQVPIN--------ATIPNVGDDPCASS 861

Query: 2741 CHEGLVSKQNFKLTG------EDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
              E    + + +  G      E+HEH FP+E++S+D E+  RTKRC CGF +QVEEL
Sbjct: 862  QSEANAMQHHNQRGGQIANDLEEHEHSFPLENESYDGESCVRTKRCACGFSIQVEEL 918


>ref|XP_004289443.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            [Fragaria vesca subsp. vesca]
          Length = 919

 Score =  793 bits (2049), Expect = 0.0
 Identities = 444/894 (49%), Positives = 576/894 (64%), Gaps = 7/894 (0%)
 Frame = +2

Query: 233  DESVSCA-LPEKEDTDESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIRR 409
            +ES  C+ +  +E+ ++SDWEDG V +S++   H      E+ +E ++ P S ++K  RR
Sbjct: 91   EESFQCSFMDSREELNDSDWEDGPVPISNSMGGH------EVTIEINETPDSRRRKRSRR 144

Query: 410  ASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTAN 589
            AS E+KE+AELVHK HLLCL+ARGRL+D AC+D L QASLLSL+P HLL+  ++ KLT  
Sbjct: 145  ASVEDKEVAELVHKAHLLCLIARGRLIDRACDDALIQASLLSLLPEHLLRVSKVAKLTVK 204

Query: 590  DLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRF 769
             L P+V WF NNF VR++S   + F   L  ALE   GT EE+AALSV+LFRALNLTTR 
Sbjct: 205  HLLPLVFWFQNNFRVRTTSVR-RSFHLALNFALETREGTQEEIAALSVALFRALNLTTRL 263

Query: 770  VCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTYLNKTG 949
            V +L+V SLKP+    AD +   +++ + L+ GIF+++T MV R      +VP       
Sbjct: 264  VSVLNVASLKPE----ADKTDWSSEDASRLSKGIFSTATPMVAR-----KNVP------- 307

Query: 950  PNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAICPTKKT 1129
                    +S   +S+ N    T +     Y          L     ND + A C TKK+
Sbjct: 308  --------VSPATSSERNSVGETPQIGSYKY---------TLACEEWNDISEA-CHTKKS 349

Query: 1130 EGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKRIKSEES 1309
            +  KR+GDLEFE+QM+MAL+ATA   A                   +   R+KR   EES
Sbjct: 350  KELKRRGDLEFEMQMQMALSATAVPTADIKLGSDNNDSDS------NVAKRLKRTVCEES 403

Query: 1310 PVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFACR 1489
              SSQ ISTAVGSRK G+P YWAE++C+GENLTGKW+H+D +NAIIDGE K+EA + AC+
Sbjct: 404  QFSSQSISTAVGSRKEGSPLYWAEVYCNGENLTGKWLHIDAINAIIDGEQKVEAVAAACK 463

Query: 1490 KLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGGMVHLD 1669
              LRYVVAFAG+GAKDVTRRYC+KWY+IAS+RV+  WWD VLAPL++LE  ATGGMV L+
Sbjct: 464  TPLRYVVAFAGNGAKDVTRRYCLKWYQIASQRVDPIWWDQVLAPLRDLEVRATGGMVFLE 523

Query: 1670 -IHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSKTHDVN 1846
              H  ++S    E    +SGS   S             +P +    AK  ++ SK     
Sbjct: 524  KEHTGSSSEHIIENFLNISGSAEMST-----------PVPSNVHLNAKSSLEGSKDSGKG 572

Query: 1847 TNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILHPK 2026
               +S ++   +ATRNSLE++EL+TR+LTEPLPTNQQAYKNH LYAIE+W  K+Q+LHPK
Sbjct: 573  LGVESSSRSVEIATRNSLEEMELETRSLTEPLPTNQQAYKNHHLYAIEKWLTKHQVLHPK 632

Query: 2027 GPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEPGV 2206
            GP+LG+CSGHPVYPRTCVQ L++K +WLR+GLQVK +E P K +KRS+K    +  E   
Sbjct: 633  GPILGFCSGHPVYPRTCVQTLKSKHKWLREGLQVKPNEHPVKELKRSIKV--QKVLEDDG 690

Query: 2207 CEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPRVV 2386
                N   +I LYGKWQ EPL LP A+NG VPKN+ G V+VWSEKCLPPGTV+LRLPRV 
Sbjct: 691  IVGGNSIATIELYGKWQLEPLHLPHAINGKVPKNDHGNVEVWSEKCLPPGTVYLRLPRVF 750

Query: 2387 PVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXXXX 2566
             VAKRLEID+APAMV FEF+NG+S PVF+GIVVC EFKDAI+                  
Sbjct: 751  SVAKRLEIDYAPAMVDFEFKNGQSYPVFDGIVVCAEFKDAILEAYAEERDRREAVEKKKY 810

Query: 2567 XXQALSRWYQLLSSIITRQRLNETYGDGS---SSDIRDNHQKDDQRGAHISSFGDDRLSN 2737
              QA+SRWYQLLSSI+TRQR+   YG+ +   S++  +  + D + G      G+D  + 
Sbjct: 811  EMQAISRWYQLLSSIVTRQRIQNRYGESAFTVSAETENVSKLDVKLGG-----GNDEEAL 865

Query: 2738 KCHEGLVSK--QNFKLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
             C +GL      +     E+HEH+F  E+QSFD++N   TKRC CGF VQVEEL
Sbjct: 866  GCQQGLHKNTLDDRSSMLENHEHVFLTENQSFDKDNLVVTKRCLCGFSVQVEEL 919


>ref|XP_006364632.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Solanum tuberosum]
          Length = 903

 Score =  780 bits (2015), Expect = 0.0
 Identities = 473/960 (49%), Positives = 586/960 (61%), Gaps = 32/960 (3%)
 Frame = +2

Query: 110  SKRLSQDPSLDRSE------EDGGQEAEKEVP-------------CNAPMPANVPHERKI 232
            S+ L  D S  R +      E+G  EAEK++              C   +  NVP E + 
Sbjct: 38   SRGLKTDDSYLRKQDTMGEPENGSSEAEKQLTGTTVVRTTLDAKCCTTDVLQNVPLEVEN 97

Query: 233  DES-VSCALPEKEDT-DESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIR 406
              + V C   E+ED  D  DWEDG V    + +   ++    + VEF   P  SK+K +R
Sbjct: 98   GSTDVQCQSIEREDELDGIDWEDGPVDTLKSESNVKEDTINGVTVEFDATPDPSKQKTVR 157

Query: 407  RASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTA 586
            RA+AEEKELAELVHKV+LLCLLARGRLVDSACNDPL QASLLSL+P HLLK  + PKLTA
Sbjct: 158  RATAEEKELAELVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTDAPKLTA 217

Query: 587  NDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTR 766
              L P+VNW H++F VR ++++ KPF   LAS LE+  GT EEVAALSV+LFRALNLTTR
Sbjct: 218  KALAPLVNWCHSHFRVRGANDTEKPFHSALASTLESQEGTPEEVAALSVALFRALNLTTR 277

Query: 767  FVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMV-----NRLSQASSSVPT 931
            FV ILDV SLKP+ ++       P++      +GIF+SSTLMV     + LS A S    
Sbjct: 278  FVSILDVASLKPEIEKSYPSGKGPSR----AGSGIFSSSTLMVVGPKCSPLSPAKSMAYG 333

Query: 932  YLNKTGPN----GDIVNEMSHGVASQVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDE 1099
              N +       G   N+ S        R  +T K+  +  M A+        S A  D 
Sbjct: 334  KHNVSDKTLTSAGQATNDKS--------RETITDKS--NKRMSAS-------TSDAQGDS 376

Query: 1100 TSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLN 1279
              A C  KK E  KRKGDLEFE+Q+EMAL+ TA E+A                 + SP  
Sbjct: 377  NDA-CIIKK-ERPKRKGDLEFEMQLEMALSTTAVEIARNTMISDVKDVGSTSSNV-SPFK 433

Query: 1280 RIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEA 1459
            + K+IK+EE   SS GISTAVGSRK GAP YWAE++CSGENLTGKWVHVDVVNAI DGE 
Sbjct: 434  K-KKIKAEECSTSSHGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGEQ 492

Query: 1460 KIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELES 1639
             +EAA+ AC+  LRYVVAFAG+GA            K  ++R  + W             
Sbjct: 493  NVEAAAAACKLPLRYVVAFAGNGA------------KDVTRRYCTKW------------- 527

Query: 1640 GATGGMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEI 1819
                                           Y  A+E V    +   +    +P  +LE 
Sbjct: 528  -------------------------------YKIASERVNSIWWDAVL----APLKELE- 551

Query: 1820 KQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWF 1999
                   V T+   H   G  ATR+SLED+EL+TR LTEPLPTNQQAY++H LY IERW 
Sbjct: 552  ------SVATSDVVHFAQG--ATRSSLEDMELETRELTEPLPTNQQAYRSHHLYIIERWL 603

Query: 2000 NKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPV 2179
            NK Q+L+PKGPVLG+CSGHPVYPR+CV+ LQ K+RWLR+GLQVKA+E PAKV+KRS K  
Sbjct: 604  NKNQVLYPKGPVLGFCSGHPVYPRSCVRTLQRKERWLREGLQVKANEIPAKVLKRSGKQN 663

Query: 2180 NAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGT 2359
              Q  E     E + +G++ALYG+WQTEPL LP AVNG+VPKNERGQVDVWSEKCLPPGT
Sbjct: 664  KGQDVEDDDYGEGDCEGTVALYGQWQTEPLFLPPAVNGIVPKNERGQVDVWSEKCLPPGT 723

Query: 2360 VHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXX 2539
            VHLRLPR+VP+AKRL+IDF+PAMVGFEFRNGRS+PV+EGIVVCTEFKDAI+         
Sbjct: 724  VHLRLPRLVPIAKRLQIDFSPAMVGFEFRNGRSLPVYEGIVVCTEFKDAILEAYAEEEVR 783

Query: 2540 XXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGAHISSFG 2719
                       +ALSRWYQLLSS+ITRQRL+  Y DG+SS    N    +++ + ++   
Sbjct: 784  REAKERRRTEAEALSRWYQLLSSLITRQRLHNRYVDGASSQSAVNIATSNEKSSLLAGGS 843

Query: 2720 DDRLSNKCHEGLVSKQNFK--LTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            ++  S    +  V+K N    +  E+HEH+F +EDQ+ DEE+STRTKRC CGF VQ EEL
Sbjct: 844  ENTRSAHQEKSEVAKSNTPSFVLAENHEHVFLVEDQTVDEESSTRTKRCCCGFSVQYEEL 903


>ref|XP_006364631.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Solanum tuberosum]
          Length = 928

 Score =  780 bits (2015), Expect = 0.0
 Identities = 473/960 (49%), Positives = 586/960 (61%), Gaps = 32/960 (3%)
 Frame = +2

Query: 110  SKRLSQDPSLDRSE------EDGGQEAEKEVP-------------CNAPMPANVPHERKI 232
            S+ L  D S  R +      E+G  EAEK++              C   +  NVP E + 
Sbjct: 63   SRGLKTDDSYLRKQDTMGEPENGSSEAEKQLTGTTVVRTTLDAKCCTTDVLQNVPLEVEN 122

Query: 233  DES-VSCALPEKEDT-DESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIR 406
              + V C   E+ED  D  DWEDG V    + +   ++    + VEF   P  SK+K +R
Sbjct: 123  GSTDVQCQSIEREDELDGIDWEDGPVDTLKSESNVKEDTINGVTVEFDATPDPSKQKTVR 182

Query: 407  RASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTA 586
            RA+AEEKELAELVHKV+LLCLLARGRLVDSACNDPL QASLLSL+P HLLK  + PKLTA
Sbjct: 183  RATAEEKELAELVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTDAPKLTA 242

Query: 587  NDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTR 766
              L P+VNW H++F VR ++++ KPF   LAS LE+  GT EEVAALSV+LFRALNLTTR
Sbjct: 243  KALAPLVNWCHSHFRVRGANDTEKPFHSALASTLESQEGTPEEVAALSVALFRALNLTTR 302

Query: 767  FVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMV-----NRLSQASSSVPT 931
            FV ILDV SLKP+ ++       P++      +GIF+SSTLMV     + LS A S    
Sbjct: 303  FVSILDVASLKPEIEKSYPSGKGPSR----AGSGIFSSSTLMVVGPKCSPLSPAKSMAYG 358

Query: 932  YLNKTGPN----GDIVNEMSHGVASQVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDE 1099
              N +       G   N+ S        R  +T K+  +  M A+        S A  D 
Sbjct: 359  KHNVSDKTLTSAGQATNDKS--------RETITDKS--NKRMSAS-------TSDAQGDS 401

Query: 1100 TSAICPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLN 1279
              A C  KK E  KRKGDLEFE+Q+EMAL+ TA E+A                 + SP  
Sbjct: 402  NDA-CIIKK-ERPKRKGDLEFEMQLEMALSTTAVEIARNTMISDVKDVGSTSSNV-SPFK 458

Query: 1280 RIKRIKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEA 1459
            + K+IK+EE   SS GISTAVGSRK GAP YWAE++CSGENLTGKWVHVDVVNAI DGE 
Sbjct: 459  K-KKIKAEECSTSSHGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGEQ 517

Query: 1460 KIEAASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELES 1639
             +EAA+ AC+  LRYVVAFAG+GA            K  ++R  + W             
Sbjct: 518  NVEAAAAACKLPLRYVVAFAGNGA------------KDVTRRYCTKW------------- 552

Query: 1640 GATGGMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEI 1819
                                           Y  A+E V    +   +    +P  +LE 
Sbjct: 553  -------------------------------YKIASERVNSIWWDAVL----APLKELE- 576

Query: 1820 KQSKTHDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWF 1999
                   V T+   H   G  ATR+SLED+EL+TR LTEPLPTNQQAY++H LY IERW 
Sbjct: 577  ------SVATSDVVHFAQG--ATRSSLEDMELETRELTEPLPTNQQAYRSHHLYIIERWL 628

Query: 2000 NKYQILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPV 2179
            NK Q+L+PKGPVLG+CSGHPVYPR+CV+ LQ K+RWLR+GLQVKA+E PAKV+KRS K  
Sbjct: 629  NKNQVLYPKGPVLGFCSGHPVYPRSCVRTLQRKERWLREGLQVKANEIPAKVLKRSGKQN 688

Query: 2180 NAQACEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGT 2359
              Q  E     E + +G++ALYG+WQTEPL LP AVNG+VPKNERGQVDVWSEKCLPPGT
Sbjct: 689  KGQDVEDDDYGEGDCEGTVALYGQWQTEPLFLPPAVNGIVPKNERGQVDVWSEKCLPPGT 748

Query: 2360 VHLRLPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXX 2539
            VHLRLPR+VP+AKRL+IDF+PAMVGFEFRNGRS+PV+EGIVVCTEFKDAI+         
Sbjct: 749  VHLRLPRLVPIAKRLQIDFSPAMVGFEFRNGRSLPVYEGIVVCTEFKDAILEAYAEEEVR 808

Query: 2540 XXXXXXXXXXXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGAHISSFG 2719
                       +ALSRWYQLLSS+ITRQRL+  Y DG+SS    N    +++ + ++   
Sbjct: 809  REAKERRRTEAEALSRWYQLLSSLITRQRLHNRYVDGASSQSAVNIATSNEKSSLLAGGS 868

Query: 2720 DDRLSNKCHEGLVSKQNFK--LTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            ++  S    +  V+K N    +  E+HEH+F +EDQ+ DEE+STRTKRC CGF VQ EEL
Sbjct: 869  ENTRSAHQEKSEVAKSNTPSFVLAENHEHVFLVEDQTVDEESSTRTKRCCCGFSVQYEEL 928


>ref|XP_004250530.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Solanum
            lycopersicum]
          Length = 928

 Score =  780 bits (2015), Expect = 0.0
 Identities = 467/956 (48%), Positives = 584/956 (61%), Gaps = 28/956 (2%)
 Frame = +2

Query: 110  SKRLSQDPSLDRSE------EDGGQEAEKEVP-------------CNAPMPANVPHERKI 232
            S+ L  D S  R +      E+G  EAEK++              C   +  NVP E + 
Sbjct: 63   SRGLKTDDSYLRKQDTIVEPENGSSEAEKQLTGTTVVRTTLDAKCCTTDVLQNVPSEVEH 122

Query: 233  DES-VSCALPEKEDT-DESDWEDGYVAVSDTGNVHLDNQARELIVEFSDLPSSSKKKPIR 406
              + V C   E+ED  D  DWEDG V    + +   ++    + VEF   P  SK+K +R
Sbjct: 123  GSTDVQCQSIEREDELDGIDWEDGPVDTLKSESNVKEDTINGVTVEFDAPPDPSKQKTVR 182

Query: 407  RASAEEKELAELVHKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTA 586
            RA+A+EKELAELVHKV+LLCLLARGR VDSACNDPL QASLLSL+P HLLK  + PKLTA
Sbjct: 183  RATAQEKELAELVHKVNLLCLLARGRFVDSACNDPLIQASLLSLLPAHLLKLTDAPKLTA 242

Query: 587  NDLTPIVNWFHNNFHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTR 766
              L P+VNW H++F VR +++  KPF   LAS LE+  GT EEVAALSV+LFRALNLTTR
Sbjct: 243  KALAPLVNWIHSHFRVRGANDMEKPFHSALASTLESQEGTPEEVAALSVALFRALNLTTR 302

Query: 767  FVCILDVVSLKPDGKQDADMSANPNQNENSLATGIFNSSTLMV-----NRLSQASSSVPT 931
            FV ILDV SLKP+ ++       P++      +GIF+SSTLMV     + LS A S    
Sbjct: 303  FVSILDVASLKPEIEKSYPSGKGPSK----AGSGIFSSSTLMVAGPKCSPLSPAKSMAYG 358

Query: 932  YLNKTGPNGDIVNEMSHGVASQVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAI 1111
              N +    D  +  +    +  +R  +T K+  +  M A+        S A  D   A 
Sbjct: 359  KHNVS----DKTSTSAGQATNDKSRETITDKS--NKRMSAS-------TSDAQGDSNDAC 405

Query: 1112 CPTKKTEGSKRKGDLEFELQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKR 1291
               KK E  KRKGDLEFE+Q+EMAL+ TA E+A                 + SP  + K+
Sbjct: 406  I--KKKEQPKRKGDLEFEMQLEMALSTTAVEIARNTMISDVKDVGSTSSNV-SPFKK-KK 461

Query: 1292 IKSEESPVSSQGISTAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEA 1471
            IK+EE   SS GISTAVGS+K GAP YWAE++CSGENLTGKWVHVDVVNAI DGE  +EA
Sbjct: 462  IKAEECSTSSHGISTAVGSKKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGEQNVEA 521

Query: 1472 ASFACRKLLRYVVAFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATG 1651
            A+ AC+  LRYVVAFAG+GA            K  ++R  + W                 
Sbjct: 522  AAAACKLPLRYVVAFAGNGA------------KDVTRRYCTKW----------------- 552

Query: 1652 GMVHLDIHQDNASNQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSK 1831
                                       Y  A+E V    +   +    +P  +LE     
Sbjct: 553  ---------------------------YKIASERVNSIWWDAVL----APLKELE----- 576

Query: 1832 THDVNTNSQSHTQGGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQ 2011
               V T+   H   G  ATR+SLED+EL+TR LTEPLPTNQQAY++H LY IERW NK Q
Sbjct: 577  --SVATSDVVHFAQG--ATRSSLEDMELETRELTEPLPTNQQAYRSHHLYIIERWLNKNQ 632

Query: 2012 ILHPKGPVLGYCSGHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQA 2191
            IL+PKGPVLG+CSGHPVYPR+CV+ LQ K+RWLR+GLQVKA+E PAKV+KRS K      
Sbjct: 633  ILYPKGPVLGFCSGHPVYPRSCVRTLQRKERWLREGLQVKANEIPAKVLKRSGKQNKGHD 692

Query: 2192 CEPGVCEEANDDGSIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLR 2371
             E     E + +G++ALYG+WQTEPL LP AVNG+VPKNERGQVDVWSEKCLPPGTVHLR
Sbjct: 693  VEDDDYGEGDCEGTVALYGQWQTEPLFLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLR 752

Query: 2372 LPRVVPVAKRLEIDFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXX 2551
            LPR+VP+AKRL+IDF+PAMVGFEFRNGRS+PV+EGIVVCTEFKDAI+             
Sbjct: 753  LPRLVPIAKRLQIDFSPAMVGFEFRNGRSLPVYEGIVVCTEFKDAILEAYAEEEVRREAK 812

Query: 2552 XXXXXXXQALSRWYQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQRGAHISSFGDDRL 2731
                   +ALSRWYQLLSS+ITRQRL+  Y DG+SS    N    + + + ++   ++  
Sbjct: 813  ERRRTEAEALSRWYQLLSSLITRQRLHNCYVDGASSQSAVNIATSNDKSSLLAGGSENTR 872

Query: 2732 SNKCHEGLVSKQNFK--LTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            S +  +  ++K N    +  E+HEH+F +EDQ+ DEE+STRTKRCRCGF VQ EEL
Sbjct: 873  SARQEKSEIAKSNSPPFVLAENHEHVFFVEDQTVDEESSTRTKRCRCGFSVQYEEL 928


>ref|XP_002871728.1| DNA repair protein Rad4 family [Arabidopsis lyrata subsp. lyrata]
            gi|297317565|gb|EFH47987.1| DNA repair protein Rad4
            family [Arabidopsis lyrata subsp. lyrata]
          Length = 868

 Score =  739 bits (1908), Expect = 0.0
 Identities = 428/942 (45%), Positives = 564/942 (59%), Gaps = 11/942 (1%)
 Frame = +2

Query: 101  RNQSKRLSQDPSLDRSEEDGGQEAEKEVPCNAPMPANVPHERKIDESVSCALPEKEDTDE 280
            R    +  +D + D ++ D G   + +    A +  NV  +R+        + ++++ ++
Sbjct: 30   RGSRGKKKKDDNCDSAKRDKGVNGKGKQAVEARLTDNVLEDRECG-----TVDDEDEMND 84

Query: 281  SDWEDGYV-AVSDTGNVHLDNQARELIVEFSD-LPSSSKKKPIRRASAEEKELAELVHKV 454
            SDWED  + ++  T +V   +  REL +EF D +P + K+K   RA+AE+KE AELVHKV
Sbjct: 85   SDWEDCPIPSLDSTVDVTNVDDTRELTIEFDDDVPDAKKQKIAYRATAEDKERAELVHKV 144

Query: 455  HLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNNFHV 634
            HLLCLLARGR+VD ACNDPL QA+LLSL+P +L K   + K+   D+ P++ W   NF V
Sbjct: 145  HLLCLLARGRIVDDACNDPLIQAALLSLLPSYLTKVSNLEKVIVKDIAPLLRWVRENFSV 204

Query: 635  RSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRFVCILDVVSLKPDGKQ 814
            R S +S K F+ +LA ALE+  GTAEE+AAL+V+L RALNLTTRFV ILDV SLKP    
Sbjct: 205  RCSPSSEKSFRTSLAFALESRKGTAEELAALAVALLRALNLTTRFVSILDVASLKP---- 260

Query: 815  DADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTYLNKTGPNGDIVNEMSHGVAS 994
             AD   +  QN   +  GIF +STLMV +  QA SS P   +    N  I +        
Sbjct: 261  GADRDESSGQNRAKMKHGIFRTSTLMVPK-QQAISSHPKKSSSHVKNKSIFD-------- 311

Query: 995  QVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFELQM 1174
                   TS+      + +  L DN +NSS           ++K++G++RKGD+EFE Q+
Sbjct: 312  -------TSEPQRGNPLGSDQLQDNAVNSSC------EAGMSRKSDGTRRKGDVEFERQI 358

Query: 1175 EMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKRIK-----SEESPVSSQGISTA 1339
             MAL+ATA                       S +N  K+I+     S+ S VS Q ISTA
Sbjct: 359  AMALSATANNQQ------------------SSQVNNKKKIREITKTSDSSSVSDQVISTA 400

Query: 1340 VGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFACRKLLRYVVAFA 1519
            +GS+K  +P  WAE++C+GEN+ G+WVHVD VN +ID E  +EAA+ AC+ +LRYVVAFA
Sbjct: 401  IGSKKVDSPLCWAEVYCNGENIDGRWVHVDAVNGMIDAEKNVEAAAAACKTVLRYVVAFA 460

Query: 1520 GHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGGMVHLDIHQDNASNQP 1699
            G GAKDVTRRYC KW+ I+ KRV S WWD VLAPL  LES AT                 
Sbjct: 461  GGGAKDVTRRYCTKWHTISPKRVCSVWWDMVLAPLIHLESAAT----------------- 503

Query: 1700 QEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSKTHDVNTNSQSHTQGGR 1879
                           NE +   +F    P++                 N  S S +  G 
Sbjct: 504  --------------HNEDIALRNFSSLNPVA-----------------NRASSSSSSFG- 531

Query: 1880 VATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCSGHP 2059
               R++LED+EL TRALTEPLPTNQQAYK H +YAIE+W +K QILHPKGPVLG+CSGHP
Sbjct: 532  --IRSALEDMELATRALTEPLPTNQQAYKTHEIYAIEKWLHKNQILHPKGPVLGFCSGHP 589

Query: 2060 VYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEPGVCEEANDDGSIA 2239
            VYPRTCVQ L+TK+RWLRDGLQ+KA+E P+K++KR+ K   ++    G          + 
Sbjct: 590  VYPRTCVQTLKTKERWLRDGLQLKANEVPSKILKRNSKFKKSKDLGDGDNNINGGSYCME 649

Query: 2240 LYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEIDFA 2419
            LYGKWQ EPL LP AVNG+VPKNERGQVDVWSEKCLPPGTVHLR PR+  VAKR  ID+A
Sbjct: 650  LYGKWQMEPLCLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIFSVAKRFGIDYA 709

Query: 2420 PAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRWYQL 2599
            PAMVGFE+R+G + P+FEGIVVCTEFKD I+                    QA SRWYQL
Sbjct: 710  PAMVGFEYRSGGATPIFEGIVVCTEFKDTILEAYAEEQEKREEEERRRNEAQAASRWYQL 769

Query: 2600 LSSIITRQRLNETYGDGSSSDIRDNHQKDDQ----RGAHISSFGDDRLSNKCHEGLVSKQ 2767
            LSSI+TR+RL   Y + +S D+     + +     +  ++ +    R++ K  +    K 
Sbjct: 770  LSSILTRERLKSRYAN-NSKDVETKSLEVNSDTVVKAKNVKAPEKQRVAKKGEKSRARKS 828

Query: 2768 NFKLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
              +   E HEH+F  E ++FDEE S +TKRC+CGF V+VE++
Sbjct: 829  --RNEDESHEHVFLDEQETFDEETSVKTKRCKCGFSVEVEQM 868


>ref|NP_197166.2| DNA repair protein Rad4 [Arabidopsis thaliana]
            gi|79327993|ref|NP_001031894.1| DNA repair protein Rad4
            [Arabidopsis thaliana] gi|17065358|gb|AAL32833.1| Unknown
            protein [Arabidopsis thaliana] gi|34098839|gb|AAQ56802.1|
            At5g16630 [Arabidopsis thaliana]
            gi|332004936|gb|AED92319.1| DNA repair protein Rad4
            [Arabidopsis thaliana] gi|332004937|gb|AED92320.1| DNA
            repair protein Rad4 [Arabidopsis thaliana]
          Length = 865

 Score =  735 bits (1897), Expect = 0.0
 Identities = 427/944 (45%), Positives = 558/944 (59%), Gaps = 13/944 (1%)
 Frame = +2

Query: 101  RNQSKRLSQDPSLDRSEEDGGQEAEKEVPCNAPMPANVPHERKIDESVSCALPEKEDTDE 280
            R    +  QD + D ++ D G   + +   +A +  NV  +R       C   + ++ ++
Sbjct: 30   RGSRGKKKQDDNCDSAKRDKGVNGKGKQALDARLIDNVLEDR------GCGNVDDDEMND 83

Query: 281  SDWEDGYV----AVSDTGNVHLDNQARELIVEFSD-LPSSSKKKPIRRASAEEKELAELV 445
            SDWED  +    +  D  NV   +  REL +EF D +P + K+K   RA+AE+K  AELV
Sbjct: 84   SDWEDCPIPSLDSTVDDNNV---DDTRELTIEFDDDVPDAKKQKNAYRATAEDKVRAELV 140

Query: 446  HKVHLLCLLARGRLVDSACNDPLTQASLLSLVPRHLLKALEIPKLTANDLTPIVNWFHNN 625
            HKVHLLCLLARGR+VDSACNDPL QA+LLSL+P +L K   + K+T  D+ P++ W   N
Sbjct: 141  HKVHLLCLLARGRIVDSACNDPLIQAALLSLLPSYLTKVSNLEKVTVKDIAPLLRWVREN 200

Query: 626  FHVRSSSNSGKPFKCNLASALENHGGTAEEVAALSVSLFRALNLTTRFVCILDVVSLKPD 805
            F V  S +S K F+ +LA ALE+  GTAEE+AAL+V+L RAL LTTRFV ILDV SLKP 
Sbjct: 201  FSVSCSPSSEKSFRTSLAFALESRKGTAEELAALAVALLRALKLTTRFVSILDVASLKP- 259

Query: 806  GKQDADMSANPNQNENSLATGIFNSSTLMVNRLSQASSSVPTYLNKTGPNGDIVNEMSHG 985
                AD + +  QN   +  GIF +STLMV +  QA SS P                   
Sbjct: 260  ---GADRNESSGQNRAKMKHGIFRTSTLMVPK-QQAISSYP-----------------KK 298

Query: 986  VASQVNRSNLTSKAIHSTYMPATLLNDNVLNSSALNDETSAICPTKKTEGSKRKGDLEFE 1165
             +S V   +   K      + +  + DN +NSS   +   +I    K++G++RKGD+EFE
Sbjct: 299  SSSHVKNKSPFEKPQLGNPLGSDQVQDNAVNSSC--EAGMSI----KSDGTRRKGDVEFE 352

Query: 1166 LQMEMALTATAAEVAXXXXXXXXXXXXXXXXXICSPLNRIKRIK-----SEESPVSSQGI 1330
             Q+ MAL+ATA                       S +N  K+++     S  S VS Q I
Sbjct: 353  RQIAMALSATADNQQ------------------SSQVNNTKKVREITKISNSSSVSDQVI 394

Query: 1331 STAVGSRKTGAPSYWAEIFCSGENLTGKWVHVDVVNAIIDGEAKIEAASFACRKLLRYVV 1510
            STA GS+K  +P  W E++C+GEN+ GKWVHVD VN +ID E  IEAA+ AC+ +LRYVV
Sbjct: 395  STAFGSKKVDSPLCWLEVYCNGENMDGKWVHVDAVNGMIDAEQNIEAAAAACKTVLRYVV 454

Query: 1511 AFAGHGAKDVTRRYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGGMVHLDIHQDNAS 1690
            AFA  GAKDVTRRYC KW+ I+SKRV+S WWD VLAPL  LESGAT     + +   N  
Sbjct: 455  AFAAGGAKDVTRRYCTKWHTISSKRVSSVWWDMVLAPLVHLESGATHD-EDIALRNFNGL 513

Query: 1691 NQPQEKASKMSGSVYSSANETVRGTSFQESIPLSGSPAAKLEIKQSKTHDVNTNSQSHTQ 1870
            N    +AS  S S                                               
Sbjct: 514  NPVSSRASSSSSS----------------------------------------------- 526

Query: 1871 GGRVATRNSLEDVELQTRALTEPLPTNQQAYKNHPLYAIERWFNKYQILHPKGPVLGYCS 2050
                  R++LED+EL TRALTE LPTNQQAYK+H +YAIE+W +K QILHPKGPVLG+CS
Sbjct: 527  ---FGIRSALEDMELATRALTESLPTNQQAYKSHEIYAIEKWLHKNQILHPKGPVLGFCS 583

Query: 2051 GHPVYPRTCVQILQTKQRWLRDGLQVKASESPAKVVKRSLKPVNAQACEPGVCEEANDDG 2230
            GHPVYPRTCVQ L+TK+RWLRDGLQ+KA+E P+K++KR+ K    +  E G         
Sbjct: 584  GHPVYPRTCVQTLKTKERWLRDGLQLKANEVPSKILKRNSKFKKVKDFEDGDNNIKGGSS 643

Query: 2231 SIALYGKWQTEPLDLPCAVNGLVPKNERGQVDVWSEKCLPPGTVHLRLPRVVPVAKRLEI 2410
             + LYGKWQ EPL LP AVNG+VPKNERGQVDVWSEKCLPPGTVHLR PR+  VAKR  I
Sbjct: 644  CMELYGKWQMEPLCLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIFAVAKRFGI 703

Query: 2411 DFAPAMVGFEFRNGRSVPVFEGIVVCTEFKDAIMXXXXXXXXXXXXXXXXXXXXQALSRW 2590
            D+APAMVGFE+R+G + P+FEGIVVCTEFKD I+                    QA SRW
Sbjct: 704  DYAPAMVGFEYRSGGATPIFEGIVVCTEFKDTILEAYAEEQEKKEEEERRRNEAQAASRW 763

Query: 2591 YQLLSSIITRQRLNETYGDGSSSDIRDNHQKDDQ---RGAHISSFGDDRLSNKCHEGLVS 2761
            YQLLSSI+TR+RL   Y + S+     + + + +   +  ++ +    R++ +  +  V 
Sbjct: 764  YQLLSSILTRERLKNRYANNSNDVEAKSLEVNSETVVKAKNVKAPEKQRVAKRGEKSRVR 823

Query: 2762 KQNFKLTGEDHEHIFPIEDQSFDEENSTRTKRCRCGFLVQVEEL 2893
            K   +   E HEH+F  E+++FDEE S +TKRC+CGF V+VE++
Sbjct: 824  KS--RNEDESHEHVFLDEEETFDEETSVKTKRCKCGFSVEVEQM 865