BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00017633
         (1929 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301860.2| pentatricopeptide repeat-containing family p...   503   e-139
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   488   e-135
ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135
ref|XP_007200721.1| hypothetical protein PRUPE_ppa025321mg [Prun...   488   e-135
gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis]     486   e-134
ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citr...   484   e-134
ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfami...   478   e-132
ref|XP_004292199.1| PREDICTED: pentatricopeptide repeat-containi...   477   e-132
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...   471   e-130
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...   469   e-129
ref|XP_003530855.2| PREDICTED: pentatricopeptide repeat-containi...   465   e-128
ref|XP_007134299.1| hypothetical protein PHAVU_010G035600g [Phas...   453   e-124
gb|EYU39274.1| hypothetical protein MIMGU_mgv1a004625mg [Mimulus...   452   e-124
gb|EYU25996.1| hypothetical protein MIMGU_mgv1a024459mg, partial...   450   e-123
ref|XP_004491724.1| PREDICTED: pentatricopeptide repeat-containi...   446   e-122
ref|XP_006338375.1| PREDICTED: pentatricopeptide repeat-containi...   445   e-122
ref|XP_004233665.1| PREDICTED: pentatricopeptide repeat-containi...   444   e-122
ref|XP_004511192.1| PREDICTED: pentatricopeptide repeat-containi...   443   e-121
ref|XP_006409153.1| hypothetical protein EUTSA_v10022616mg [Eutr...   422   e-115
ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arab...   420   e-114

>ref|XP_002301860.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550345843|gb|EEE81133.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 933

 Score =  503 bits (1295), Expect = e-139
 Identities = 239/375 (63%), Positives = 294/375 (78%)
 Frame = +1

Query: 148  GLVRVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTM 327
            GLVRVGD+  A +LFD MP +N+ATWN++I GYARL +V  A  LF++MP RD I+WTTM
Sbjct: 155  GLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTM 214

Query: 328  ITCYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGF 507
            I CYSQNK+F+EA+ +F +M   GIS D VTMATVISACAHLGAL+LG++IH Y+M +GF
Sbjct: 215  INCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGF 274

Query: 508  NLDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKM 687
            NLDVYIGSAL+DMYAKCGS++RSL++FFKLREKNLFCWNS+IEGLA+HGY E+AL MF  
Sbjct: 275  NLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDK 334

Query: 688  MEAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXX 867
            ME EK++PNGVTFVSVLSAC HAGL++EG + F SM  D+SI PGVEHYGCMVD      
Sbjct: 335  MEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAG 394

Query: 868  XXXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLN 1047
                    I++MK+EPN++IWGALL+GCKLHR LEIA+VA  KLM LEPGNSGYY LL+N
Sbjct: 395  LLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVN 454

Query: 1048 TYAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXX 1227
              AE N+WGE A++R TMKEQGV+K+CPGSSW++++ +VH+F ASD  H           
Sbjct: 455  MNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLA 514

Query: 1228 XXXGQLKLSNGSTEL 1272
               GQ+KL+    EL
Sbjct: 515  ELDGQMKLAGYVPEL 529



 Score = 84.3 bits (207), Expect = 2e-13
 Identities = 44/155 (28%), Positives = 82/155 (52%)
 Frame = +1

Query: 226 NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
           N  I+  +    +  A   +++M + +   +  MI  + Q+ Q  +A++L+  M  A +S
Sbjct: 18  NQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVS 77

Query: 406 SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIERSLVV 585
             + T  ++I AC  +  L     +H +V  NGF+  V++ ++LVD Y+  G IE S+ V
Sbjct: 78  PTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRV 137

Query: 586 FFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMM 690
           F ++ E+++F W +++ GL   G    A  +F MM
Sbjct: 138 FDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMM 172



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 31/49 (63%), Positives = 40/49 (81%)
 Frame = +3

Query: 3   IRALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           ++ALELY++MLRA VSPTSYT+ SLIKAC + S L F E VHG +W++G
Sbjct: 62  VQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNG 110


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Vitis vinifera]
          Length = 464

 Score =  488 bits (1256), Expect = e-135
 Identities = 232/373 (62%), Positives = 288/373 (77%)
 Frame = +1

Query: 157  RVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITC 336
            R GD+  AR+LFDEMP +N A+WN+MI GY+RL +V SA  LFS+MP RD I+WTTMI C
Sbjct: 88   RTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIAC 147

Query: 337  YSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLD 516
            YSQNKQF+EA+ +F +M+T GI  D VTMAT+ISACAHLGAL+LG++IH+Y M  GF+LD
Sbjct: 148  YSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLD 207

Query: 517  VYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEA 696
            VYIGSAL+DMYAKCGS+++SLVVFFKLR+KNLFCWNSIIEGLA+HGY E+AL MF  M+ 
Sbjct: 208  VYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQR 267

Query: 697  EKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXX 876
            EK++PNGVTF+SVL ACTHAGL++EG + F+SM  D+SI P +EHYGCMVD         
Sbjct: 268  EKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLE 327

Query: 877  XXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYA 1056
                 ++SM++EPNS+IWGALL GCKLHR L+IA+VA+ +   LEP NSGYY LL+N YA
Sbjct: 328  DALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYA 387

Query: 1057 EANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXX 1236
            E N+W EVA +RATMKE GV+K  PGSSW+++D ++H+F ASD  H              
Sbjct: 388  EVNRWSEVANIRATMKELGVEKTSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELD 447

Query: 1237 GQLKLSNGSTELG 1275
            GQLKLS    ELG
Sbjct: 448  GQLKLSGYVPELG 460



 Score = 66.2 bits (160), Expect = 5e-08
 Identities = 27/40 (67%), Positives = 36/40 (90%)
 Frame = +3

Query: 30  MLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           M++A+VSPTS+T+SSL+KAC++ S LGFGE VHG IWK+G
Sbjct: 1   MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYG 40



 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 30/102 (29%), Positives = 55/102 (53%)
 Frame = +1

Query: 385 MKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGS 564
           M  A +S  + T ++++ AC+ +  L  G  +H ++   GF+  V++ +ALVD Y   G 
Sbjct: 1   MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60

Query: 565 IERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMM 690
           I  +  VF ++ E+++F W ++I   A  G    A ++F  M
Sbjct: 61  IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEM 102


>ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Citrus sinensis]
          Length = 578

 Score =  488 bits (1255), Expect = e-135
 Identities = 234/372 (62%), Positives = 288/372 (77%)
 Frame = +1

Query: 157  RVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITC 336
            R GDL  AR+LFDEMP++N+ATWN+MI  YARLG+V +A  LF++MP RD I+WTTMITC
Sbjct: 203  RAGDLCSARRLFDEMPERNIATWNTMIDAYARLGNVRAAELLFNKMPARDIISWTTMITC 262

Query: 337  YSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLD 516
            YSQNKQF+EA+  F +MK +GIS D VTMATV+SACAHLGAL+LGR+IH+YVM  GF++D
Sbjct: 263  YSQNKQFREALDAFNEMKNSGISPDQVTMATVLSACAHLGALDLGREIHLYVMQIGFDID 322

Query: 517  VYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEA 696
            VYIGSALVDMYAKCGS++RSL+VFFKLREKNLFCWNSIIEGLA+HG+  +AL MF  M  
Sbjct: 323  VYIGSALVDMYAKCGSLDRSLLVFFKLREKNLFCWNSIIEGLAVHGFAHEALAMFDRMIY 382

Query: 697  EKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXX 876
            E VEPNGVTF+SVLSACTHAGL++EG R F+SM   YSI+P VEHYGCMVD         
Sbjct: 383  ENVEPNGVTFISVLSACTHAGLVEEGRRRFLSMTCGYSITPEVEHYGCMVDLLSKAGLLE 442

Query: 877  XXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYA 1056
                 I+S K +PN++IWGALL GCKLHR LEIA +A+ +LM LEP NSGY  LLLN YA
Sbjct: 443  DALELIRSSKFQPNAVIWGALLGGCKLHRNLEIAHIAVNELMVLEPNNSGYCTLLLNMYA 502

Query: 1057 EANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXX 1236
            E ++W EV ++R  MKE G++K+CPGSSW++++ +V++F ASD  HP             
Sbjct: 503  EVSRWAEVTKIRVAMKELGIEKRCPGSSWIEMERKVYQFAASDKSHPASDEIYSSLSKLD 562

Query: 1237 GQLKLSNGSTEL 1272
             QLKL++   EL
Sbjct: 563  EQLKLASYVPEL 574



 Score = 66.2 bits (160), Expect = 5e-08
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +A+  YL MLRAEV PTSYT+SSLIKAC++   +  GE VHGQ+WK+G
Sbjct: 108 QAIIFYLHMLRAEVLPTSYTFSSLIKACSLLLDICSGEAVHGQVWKNG 155


>ref|XP_007200721.1| hypothetical protein PRUPE_ppa025321mg [Prunus persica]
            gi|462396121|gb|EMJ01920.1| hypothetical protein
            PRUPE_ppa025321mg [Prunus persica]
          Length = 529

 Score =  488 bits (1255), Expect = e-135
 Identities = 236/374 (63%), Positives = 287/374 (76%)
 Frame = +1

Query: 154  VRVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMIT 333
            VRVGD+  AR LFDEM ++N+ TWN+MI GYARLG+V SA  LF+ MP RD I+WTTMI 
Sbjct: 153  VRVGDMSSARILFDEMEERNITTWNTMIDGYARLGNVESAELLFNHMPTRDIISWTTMID 212

Query: 334  CYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNL 513
            CYSQNK+F EA+ +F DM+  GIS D VTMATVISACAHLGAL+LG++IH+Y++ NGF+L
Sbjct: 213  CYSQNKKFGEALAVFSDMRMKGISPDEVTMATVISACAHLGALDLGKEIHLYILQNGFDL 272

Query: 514  DVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMME 693
            DVYIGSAL+DMYAKCG+++RSL+VFFKL++KNLFCWNS IEGLA+HG+ ++AL MF  ME
Sbjct: 273  DVYIGSALIDMYAKCGALDRSLLVFFKLQDKNLFCWNSAIEGLAVHGFAKEALAMFSKME 332

Query: 694  AEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXX 873
             EK+ PNGVTFVSVLS+CTHAGL++EG R F SM  DYSI P VEHYGCMVD        
Sbjct: 333  REKINPNGVTFVSVLSSCTHAGLVEEGRRRFSSMTQDYSILPEVEHYGCMVDLLSKAGLL 392

Query: 874  XXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTY 1053
                  I+SMK EPN++IWGALL GCKLHR LEIA+V++ +L  LEP NSGYY LL+N Y
Sbjct: 393  EDALELIRSMKFEPNAVIWGALLGGCKLHRNLEIAKVSVNELTVLEPNNSGYYTLLVNMY 452

Query: 1054 AEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXX 1233
            AEA +W +VA  RATMKE GV+K CPGSSW++++ +VH+F ASD  HP            
Sbjct: 453  AEAKRWRQVADTRATMKELGVEKGCPGSSWIEMERKVHQFAASDKSHPASSEIYLLLAEL 512

Query: 1234 XGQLKLSNGSTELG 1275
              QLKL     ELG
Sbjct: 513  YRQLKLDACVPELG 526



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +AL  Y+ MLR  V PTSYT+SSLIKACT  SALG GE V G IWK+G
Sbjct: 59  QALGCYINMLRGMVLPTSYTFSSLIKACTSLSALGVGEAVQGHIWKNG 106



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 55/263 (20%), Positives = 103/263 (39%), Gaps = 62/263 (23%)
 Frame = +1

Query: 226 NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
           N +I   + L  +  A   F+++   +   +  MI  +       +A+  + +M    + 
Sbjct: 14  NQLITACSTLSRIDYAVLAFTQIESPNVFVYNAMIKGFVCCGHPCQALGCYINMLRGMVL 73

Query: 406 SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAK---------- 555
             + T +++I AC  L AL +G  +  ++  NGF   V++ ++L+D Y+K          
Sbjct: 74  PTSYTFSSLIKACTSLSALGVGEAVQGHIWKNGFGSHVFVQTSLIDFYSKLRRISESRKV 133

Query: 556 ---------------------CGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGE--- 663
                                 G +  + ++F ++ E+N+  WN++I+G A  G  E   
Sbjct: 134 FDEMPERDAFAWTTMVSSHVRVGDMSSARILFDEMEERNITTWNTMIDGYARLGNVESAE 193

Query: 664 ----------------------------KALEMFKMMEAEKVEPNGVTFVSVLSACTHAG 759
                                       +AL +F  M  + + P+ VT  +V+SAC H G
Sbjct: 194 LLFNHMPTRDIISWTTMIDCYSQNKKFGEALAVFSDMRMKGISPDEVTMATVISACAHLG 253

Query: 760 LLKEGHRCFISMIHDYSISPGVE 828
            L  G       IH Y +  G +
Sbjct: 254 ALDLGKE-----IHLYILQNGFD 271


>gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis]
          Length = 554

 Score =  486 bits (1252), Expect = e-134
 Identities = 230/366 (62%), Positives = 286/366 (78%)
 Frame = +1

Query: 157  RVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITC 336
            R GD+  A KLF+ M +KN  TWNSMI G+ARLG++ SA  LF +MP RD+I+WTTMITC
Sbjct: 182  RAGDMDCAAKLFERMSEKNTTTWNSMIDGFARLGNLESAELLFHQMPARDTISWTTMITC 241

Query: 337  YSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLD 516
            YS NK+ +EA+  FE+M   GIS D VTMATV+SACAHLGALELG+++H+YVM NGF+LD
Sbjct: 242  YSHNKKHREALAAFEEMTMNGISPDGVTMATVVSACAHLGALELGKEMHLYVMQNGFHLD 301

Query: 517  VYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEA 696
            V+IGSAL+DMYAKCG+++R+L+VFFKLR+KNLFCWNSIIEGLA HGY E+ L M   ME 
Sbjct: 302  VFIGSALIDMYAKCGALDRALLVFFKLRDKNLFCWNSIIEGLAAHGYAEETLAMLSKMEE 361

Query: 697  EKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXX 876
            + ++PNGVTFVSVLSACTHAGL++EG + F+SM +DYSI+PGVEHYGCMVD         
Sbjct: 362  KNIKPNGVTFVSVLSACTHAGLVQEGRKRFLSMTNDYSITPGVEHYGCMVDLLSKAGLLE 421

Query: 877  XXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYA 1056
                 I+SMKV PNSIIWGALL GCKLHR L IA+VA+K+LM LEP NSGYY LL++ +A
Sbjct: 422  EALDLIRSMKVTPNSIIWGALLGGCKLHRNLTIAQVAVKELMVLEPNNSGYYHLLVDMFA 481

Query: 1057 EANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXX 1236
            E NQWGEV ++ A MKE GV+KKCPG+SW++++  +H+F ASD+ HP             
Sbjct: 482  EVNQWGEVKKIWAIMKELGVEKKCPGASWIEMERSIHQFAASDNSHPASAEIYSLLAWLN 541

Query: 1237 GQLKLS 1254
            GQLKL+
Sbjct: 542  GQLKLA 547



 Score = 75.5 bits (184), Expect = 8e-11
 Identities = 50/190 (26%), Positives = 88/190 (46%)
 Frame = +1

Query: 226 NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
           N  I+  +    V  A   F ++   +   +  MI  Y  +    +A++ + DM  A +S
Sbjct: 42  NQFISASSNFSRVDYAVLAFKQIENPNVFVYNAMIRGYVNDGYPYQALECYVDMMRAKVS 101

Query: 406 SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIERSLVV 585
             + T  ++I AC  L     G  +H ++  NG +  VY+ +A+VD Y+K   I+ S  V
Sbjct: 102 PTSYTFPSLIRACTLLFVPGFGEAVHGHIWRNGLDSHVYVQTAMVDFYSKLSRIKDSRRV 161

Query: 586 FFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEKVEPNGVTFVSVLSACTHAGLL 765
           F ++ E++ F W ++I   A  G  + A ++F+ M     E N  T+ S++      G L
Sbjct: 162 FDEMSERDAFAWTTMISAHARAGDMDCAAKLFERMS----EKNTTTWNSMIDGFARLGNL 217

Query: 766 KEGHRCFISM 795
           +     F  M
Sbjct: 218 ESAELLFHQM 227



 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 30/48 (62%), Positives = 40/48 (83%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +ALE Y++M+RA+VSPTSYT+ SLI+ACT+    GFGE VHG IW++G
Sbjct: 87  QALECYVDMMRAKVSPTSYTFPSLIRACTLLFVPGFGEAVHGHIWRNG 134


>ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citrus clementina]
            gi|557522287|gb|ESR33654.1| hypothetical protein
            CICLE_v10006642mg [Citrus clementina]
          Length = 530

 Score =  484 bits (1246), Expect = e-134
 Identities = 232/372 (62%), Positives = 286/372 (76%)
 Frame = +1

Query: 157  RVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITC 336
            R GDL  AR+LFDEMP++N+ATWN+MI  YARLG+V +A  LF++MP RD I+WTTMITC
Sbjct: 155  RAGDLCSARRLFDEMPERNIATWNTMIDAYARLGNVQAAELLFNKMPARDIISWTTMITC 214

Query: 337  YSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLD 516
            YSQN QF+EA+  F +MK +GIS D VTMATV+SACAHLGAL+LGR+IH+YVM  GF++D
Sbjct: 215  YSQNNQFREALDAFNEMKKSGISPDQVTMATVLSACAHLGALDLGREIHLYVMQIGFDID 274

Query: 517  VYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEA 696
            VYIGSAL+DMYAKCGS++RSL+VFFKLREKNLFCWNSIIEGLA HG+  +AL MF  M  
Sbjct: 275  VYIGSALIDMYAKCGSLDRSLLVFFKLREKNLFCWNSIIEGLAAHGFAHEALAMFDRMIY 334

Query: 697  EKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXX 876
            E VEPNGVTF+SVLSACTHAGL++EG R F+SM   YSI+P VEHYGCMVD         
Sbjct: 335  ENVEPNGVTFISVLSACTHAGLVEEGRRRFLSMTCGYSITPEVEHYGCMVDLLSKAGLLE 394

Query: 877  XXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYA 1056
                 I+S K +PN++IWGALL GCKLHR LEIA +A+ +LM LEP NSGY  LLLN YA
Sbjct: 395  DALELIRSSKFQPNAVIWGALLGGCKLHRNLEIAHIAVNELMILEPNNSGYCTLLLNMYA 454

Query: 1057 EANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXX 1236
            E ++W EV ++R  MKE G++K+CPGSSW++++ +V++F ASD  HP             
Sbjct: 455  EVSRWAEVTKIRVAMKELGIEKRCPGSSWIEMERKVYQFAASDKSHPASDEIYSSLSKLD 514

Query: 1237 GQLKLSNGSTEL 1272
             QLKL++   EL
Sbjct: 515  EQLKLASYVPEL 526



 Score = 66.2 bits (160), Expect = 5e-08
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +A+  YL MLRAEV PTSYT+SSLIKAC++   +  GE VHGQ+WK+G
Sbjct: 60  QAIIFYLHMLRAEVLPTSYTFSSLIKACSLLLDICSGEAVHGQVWKNG 107


>ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
            cacao] gi|508702602|gb|EOX94498.1| Basic helix-loop-helix
            DNA-binding superfamily protein [Theobroma cacao]
          Length = 600

 Score =  478 bits (1229), Expect = e-132
 Identities = 231/377 (61%), Positives = 286/377 (75%), Gaps = 1/377 (0%)
 Frame = +1

Query: 148  GLVRVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTM 327
            G ++ GDL+ +R+LFDEMP++N ATWN+MI GYAR+GDV SA   F++MPV+D I+WT+M
Sbjct: 221  GFLKAGDLVSSRRLFDEMPERNTATWNAMIDGYARVGDVESAELFFNQMPVKDIISWTSM 280

Query: 328  ITCYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGF 507
            I CYS+NKQF+EA+ +FE+M+   +S D VTMA+VISACAHLGAL  G++IH YVM NGF
Sbjct: 281  INCYSKNKQFREALAVFEEMRRNKVSPDEVTMASVISACAHLGALNTGKEIHHYVMQNGF 340

Query: 508  NLDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKM 687
             LDVYIGSALVDMYAKCGS+ERSL+ FFKLREKNLFCWNS+IEGLA+HGY ++AL MF  
Sbjct: 341  YLDVYIGSALVDMYAKCGSLERSLLAFFKLREKNLFCWNSVIEGLAVHGYAQEALAMFDS 400

Query: 688  MEAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXX 867
            ME   V+PNGVTFVSVLSACTHAGL++ G + F+SM  DYSI P VEHYGCMVD      
Sbjct: 401  MERHHVKPNGVTFVSVLSACTHAGLVEVGRQRFLSMTRDYSIPPEVEHYGCMVDLLSKAG 460

Query: 868  XXXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLN 1047
                    I+SMK+EPN +IWGALL GCKLHR LEIA+ A+ +LM L+P +SGYY LLLN
Sbjct: 461  LLEDALFLIRSMKLEPNPVIWGALLGGCKLHRNLEIAQFAVNELMVLDPHDSGYYTLLLN 520

Query: 1048 TYAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXX 1227
             YAE N+W +V ++R  M+E GV K CPGSSW++++ E+H+F ASD  H           
Sbjct: 521  LYAEVNRWAQVTKIRQMMRELGVKKGCPGSSWIEMESEIHQFAASDKSHLASDEIYSILA 580

Query: 1228 XXXGQLKLSN-GSTELG 1275
                QLKL+   S ELG
Sbjct: 581  ELDLQLKLAGYVSDELG 597



 Score = 69.7 bits (169), Expect = 4e-09
 Identities = 30/48 (62%), Positives = 39/48 (81%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +AL+ +  MLRA V P+S+T+SSL+KAC + S LGFGE VHGQ+WKHG
Sbjct: 129 QALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHGQVWKHG 176



 Score = 69.3 bits (168), Expect = 6e-09
 Identities = 73/328 (22%), Positives = 115/328 (35%), Gaps = 66/328 (20%)
 Frame = +1

Query: 175 YARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQ 354
           YA   F +M K NV  +N++I G                           ++ C++    
Sbjct: 98  YAILAFTQMQKPNVFVYNALIKG---------------------------LVHCHNPF-- 128

Query: 355 FKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSA 534
             +A+   + M  AG+   + T ++++ AC  +  L  G  +H  V  +GF   V++ +A
Sbjct: 129 --QALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHGQVWKHGFESHVFVQTA 186

Query: 535 LVDMYA-------------------------------KCGSIERSLVVFFKLREKNLFCW 621
           LVD YA                               K G +  S  +F ++ E+N   W
Sbjct: 187 LVDFYANVGKFAESKRVFDEMPDRDVFAWTTMVSGFLKAGDLVSSRRLFDEMPERNTATW 246

Query: 622 NSIIEGLAMHGYGEKALEMFKMMEAE-------------------------------KVE 708
           N++I+G A  G  E A   F  M  +                               KV 
Sbjct: 247 NAMIDGYARVGDVESAELFFNQMPVKDIISWTSMINCYSKNKQFREALAVFEEMRRNKVS 306

Query: 709 PNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPG----VEHYGCMVDXXXXXXXXX 876
           P+ VT  SV+SAC H G L  G       IH Y +  G    V     +VD         
Sbjct: 307 PDEVTMASVISACAHLGALNTGKE-----IHHYVMQNGFYLDVYIGSALVDMYAKCGSLE 361

Query: 877 XXXXXIKSMKVEPNSIIWGALLNGCKLH 960
                   ++ E N   W +++ G  +H
Sbjct: 362 RSLLAFFKLR-EKNLFCWNSVIEGLAVH 388


>ref|XP_004292199.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Fragaria vesca subsp. vesca]
          Length = 532

 Score =  477 bits (1228), Expect = e-132
 Identities = 231/369 (62%), Positives = 282/369 (76%), Gaps = 3/369 (0%)
 Frame = +1

Query: 154  VRVGDLLYARKLFDEMPKK---NVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTT 324
            VRVGD+  AR LFDEM ++   N ATWN+MI GYARLGDV SA  LF +MP RD I+WT 
Sbjct: 153  VRVGDMSSARVLFDEMLERCIANAATWNTMIDGYARLGDVESAGMLFDQMPARDLISWTA 212

Query: 325  MITCYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNG 504
            MI CY QNK+F EA+ +F++M+  G+S DAVTM+TV+SACAHLGAL+LG++IH YVM NG
Sbjct: 213  MINCYCQNKRFGEALAVFDEMRINGVSPDAVTMSTVVSACAHLGALDLGKEIHYYVMRNG 272

Query: 505  FNLDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFK 684
            F+LDVYIGSAL+DMYAKCG+++R+LVVFF LREKNLFCWNS+IEGLA HG  EKAL MF 
Sbjct: 273  FDLDVYIGSALIDMYAKCGALDRALVVFFNLREKNLFCWNSVIEGLAAHGDAEKALAMFS 332

Query: 685  MMEAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXX 864
             M  EK++PNGVTFVSVLSACTHAGL++EG R F SM  DYSISPG EHYGCMVD     
Sbjct: 333  KMAREKIKPNGVTFVSVLSACTHAGLVEEGRRRFSSMTQDYSISPGAEHYGCMVDLLSRA 392

Query: 865  XXXXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLL 1044
                     I+SMK++PNS+IWGALL GCKLH+ LEIA+V++ +LM LEP NSG+Y L++
Sbjct: 393  GLLDDALELIRSMKLKPNSVIWGALLGGCKLHKNLEIAKVSVNELMVLEPNNSGHYNLIV 452

Query: 1045 NTYAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXX 1224
            N YA+ N+WGEVA +RA MK+ GV K  PGSSW++I+ ++H F ASD  H          
Sbjct: 453  NMYADVNRWGEVADVRAIMKQLGVQKTSPGSSWIEIERKIHTFAASDKSHAASGEIHSFL 512

Query: 1225 XXXXGQLKL 1251
                GQ+KL
Sbjct: 513  AELYGQMKL 521



 Score = 65.9 bits (159), Expect = 6e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           + L  ++ MLR  V PTSYTY SLIKAC   S +GFGEGVHG++WK G
Sbjct: 59  QGLLCFINMLRNRVFPTSYTYPSLIKACASVSVMGFGEGVHGRVWKTG 106



 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 68/327 (20%), Positives = 118/327 (36%), Gaps = 69/327 (21%)
 Frame = +1

Query: 226 NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
           N +I   + L  +  A+  FS +   ++  +  MI          + +  F +M    + 
Sbjct: 14  NQLITASSSLSRLNHAALAFSHIQNPNAFVYNAMIKASVHCGHPFQGLLCFINMLRNRVF 73

Query: 406 SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIERSLVV 585
             + T  ++I ACA +  +  G  +H  V   GF+  VY+ +AL+D+Y+K G +  +  V
Sbjct: 74  PTSYTYPSLIKACASVSVMGFGEGVHGRVWKTGFDSHVYVQTALIDLYSKLGRVGDARKV 133

Query: 586 FFKLREKNLFC----------------------------------WNSIIEGLAMHGYGE 663
           F ++ +++ F                                   WN++I+G A  G  E
Sbjct: 134 FDEMPDRDGFAWTTMVASHVRVGDMSSARVLFDEMLERCIANAATWNTMIDGYARLGDVE 193

Query: 664 KA-------------------------------LEMFKMMEAEKVEPNGVTFVSVLSACT 750
            A                               L +F  M    V P+ VT  +V+SAC 
Sbjct: 194 SAGMLFDQMPARDLISWTAMINCYCQNKRFGEALAVFDEMRINGVSPDAVTMSTVVSACA 253

Query: 751 HAGLLKEGHRCFISMIHDYSISPGVE---HYG-CMVDXXXXXXXXXXXXXXIKSMKVEPN 918
           H G L  G       IH Y +  G +   + G  ++D                +++ E N
Sbjct: 254 HLGALDLGKE-----IHYYVMRNGFDLDVYIGSALIDMYAKCGALDRALVVFFNLR-EKN 307

Query: 919 SIIWGALLNGCKLHRKLEIAEVALKKL 999
              W +++ G   H   E A     K+
Sbjct: 308 LFCWNSVIEGLAAHGDAEKALAMFSKM 334


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Cucumis sativus]
          Length = 697

 Score =  471 bits (1212), Expect = e-130
 Identities = 225/368 (61%), Positives = 281/368 (76%)
 Frame = +1

Query: 151  LVRVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMI 330
            L RVGD+  ARKLF+EMP++N ATWN+MI GYARLG+V SA  LF++MP +D I+WTTMI
Sbjct: 311  LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMI 370

Query: 331  TCYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFN 510
            TCYSQNKQ+++A+ ++ +M+  GI  D VTM+TV SACAH+GALELG++IH YVM  G N
Sbjct: 371  TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 430

Query: 511  LDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMM 690
            LDVYIGSALVDMYAKCGS++ SL++FFKL +KNL+CWN++IEGLA+HGY EKAL MF +M
Sbjct: 431  LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 490

Query: 691  EAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXX 870
            E EK+ PNGVTF+S+LSACTHAGL+ EG   F+SM  DY I P + HYGCMVD       
Sbjct: 491  EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 550

Query: 871  XXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNT 1050
                   IKSM+ EPNSIIWGALLNGCKLH   EIAE A+++LM LEP NSG+Y LL++ 
Sbjct: 551  LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 610

Query: 1051 YAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXX 1230
            YAE   W EVA +R+ MKE+GV+KK PGSSW++++G +H+F AS   HP           
Sbjct: 611  YAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLTE 670

Query: 1231 XXGQLKLS 1254
              GQLKL+
Sbjct: 671  LDGQLKLA 678



 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 47/202 (23%), Positives = 91/202 (45%)
 Frame = +1

Query: 190 FDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAV 369
           F +M   NV  +N+MI G+   G    A                  + CY         V
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRA------------------LQCY---------V 223

Query: 370 KLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMY 549
            + E+   + +   + T ++++ AC  + A+ELG+ +H ++   GF   +++ +ALVD Y
Sbjct: 224 HMLEE---SNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFY 280

Query: 550 AKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEKVEPNGVTFV 729
           +K   +  +  VF ++ E++ F W +++  LA  G  + A ++F+    E  E N  T+ 
Sbjct: 281 SKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFE----EMPERNTATWN 336

Query: 730 SVLSACTHAGLLKEGHRCFISM 795
           +++      G ++     F  M
Sbjct: 337 TMIDGYARLGNVESAELLFNQM 358


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Cucumis sativus]
          Length = 600

 Score =  469 bits (1208), Expect = e-129
 Identities = 224/368 (60%), Positives = 280/368 (76%)
 Frame = +1

Query: 151  LVRVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMI 330
            L RVGD+  ARKLF+EMP++N ATWN+MI GY RLG+V SA  LF++MP +D I+WTTMI
Sbjct: 214  LARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMI 273

Query: 331  TCYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFN 510
            TCYSQNKQ+++A+ ++ +M+  GI  D VTM+TV SACAH+GALELG++IH YVM  G N
Sbjct: 274  TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 333

Query: 511  LDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMM 690
            LDVYIGSALVDMYAKCGS++ SL++FFKL +KNL+CWN++IEGLA+HGY EKAL MF +M
Sbjct: 334  LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 393

Query: 691  EAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXX 870
            E EK+ PNGVTF+S+LSACTHAGL+ EG   F+SM  DY I P + HYGCMVD       
Sbjct: 394  EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 453

Query: 871  XXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNT 1050
                   IKSM+ EPNSIIWGALLNGCKLH   EIAE A+++LM LEP NSG+Y LL++ 
Sbjct: 454  LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 513

Query: 1051 YAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXX 1230
            YAE   W EVA +R+ MKE+GV+KK PGSSW++++G +H+F AS   HP           
Sbjct: 514  YAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTE 573

Query: 1231 XXGQLKLS 1254
              GQLKL+
Sbjct: 574  LDGQLKLA 581



 Score = 70.1 bits (170), Expect = 3e-09
 Identities = 48/202 (23%), Positives = 92/202 (45%)
 Frame = +1

Query: 190 FDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAV 369
           F +M   NV  +N+MI G+   G    A                  + CY         V
Sbjct: 94  FTQMENPNVFVYNAMIKGFVYCGYPFRA------------------LQCY---------V 126

Query: 370 KLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMY 549
            + E+   + +   + T ++++ AC  + A+ELG+ +H ++   GF   +++ +ALVD Y
Sbjct: 127 HMLEE---SNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFY 183

Query: 550 AKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEKVEPNGVTFV 729
           +K   +  +  VF ++ E++ F W +++  LA  G  + A ++F+    E  E N  T+ 
Sbjct: 184 SKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFE----EMPERNTATWN 239

Query: 730 SVLSACTHAGLLKEGHRCFISM 795
           +++   T  G ++     F  M
Sbjct: 240 TMIDGYTRLGNVESAELLFNQM 261


>ref|XP_003530855.2| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Glycine max]
          Length = 585

 Score =  465 bits (1197), Expect = e-128
 Identities = 218/374 (58%), Positives = 282/374 (75%)
 Frame = +1

Query: 154  VRVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMIT 333
            VR GD+  A +LFDEMP+KNVATWN+MI GY +LG+  SA  LF++MP RD I+WTTM+ 
Sbjct: 209  VRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMN 268

Query: 334  CYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNL 513
            CYS+NK++KE + LF D+   G+  D VTM TVISACAHLGAL LG+++H+Y++  GF+L
Sbjct: 269  CYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDL 328

Query: 514  DVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMME 693
            DVYIGS+L+DMYAKCGSI+ +L+VF+KL+ KNLFCWN II+GLA HGY E+AL MF  ME
Sbjct: 329  DVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEME 388

Query: 694  AEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXX 873
             +++ PN VTF+S+L+ACTHAG ++EG R F+SM+ DY I+P VEHYGCMVD        
Sbjct: 389  RKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLL 448

Query: 874  XXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTY 1053
                  I++M VEPNS IWGALLNGCKLH+ LEIA +A++ LM LEP NSG+Y+LL+N Y
Sbjct: 449  EDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMY 508

Query: 1054 AEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXX 1233
            AE N+W EVA++R TMK+ GV+K+CPGSSW++I+  VH F ASD +HP            
Sbjct: 509  AEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLFAASDTYHPSYSQLHLLLAEL 568

Query: 1234 XGQLKLSNGSTELG 1275
              QL+L+    ELG
Sbjct: 569  DDQLRLAGYVPELG 582



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +AL  Y+ MLR  V PTSY++SSLIKACT+     FGE VHG +WKHG
Sbjct: 115 QALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHG 162


>ref|XP_007134299.1| hypothetical protein PHAVU_010G035600g [Phaseolus vulgaris]
            gi|561007344|gb|ESW06293.1| hypothetical protein
            PHAVU_010G035600g [Phaseolus vulgaris]
          Length = 558

 Score =  453 bits (1166), Expect = e-124
 Identities = 209/367 (56%), Positives = 282/367 (76%)
 Frame = +1

Query: 151  LVRVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMI 330
            LVR GD+  A  LFDEMP+KN+ATWN+MI G+A+LG+  SA  LF++M  RD I+WTTM+
Sbjct: 181  LVRDGDMASAGNLFDEMPEKNIATWNAMIDGHAKLGNAESAEFLFNQMLARDIISWTTMM 240

Query: 331  TCYSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFN 510
            +C+S+NK++ + V+LF DM   G+  D VTM+TVISACAHLGAL+LG+++H+Y+M + F+
Sbjct: 241  SCFSRNKRYMDVVRLFHDMIDKGMIPDEVTMSTVISACAHLGALDLGKEVHLYLMLHEFD 300

Query: 511  LDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMM 690
            LDVYIGS+L+DMYAKCGSI+R+L+VF+KL+ KNL+CWNSII+GLA HGY ++AL MF  M
Sbjct: 301  LDVYIGSSLIDMYAKCGSIDRALLVFYKLQNKNLYCWNSIIDGLATHGYAKEALRMFGAM 360

Query: 691  EAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXX 870
            E++++ PN VTF+S+LSACTH G ++EGH  F+SMI DY I+P VEHYGCMVD       
Sbjct: 361  ESKRIRPNAVTFISILSACTHTGFVEEGHCRFMSMIKDYCITPQVEHYGCMVDLLSKAGL 420

Query: 871  XXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNT 1050
                   +++M VEPNS IWGALLNGCKLH+ LEIA +A++ LM LEP NSG+Y+LL++ 
Sbjct: 421  LEDALEMVRNMAVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVSM 480

Query: 1051 YAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXX 1230
            +AE N+W EVA++R  MK+ GV+K+CPG+SW++I+  VH F ASD +HP           
Sbjct: 481  HAEVNRWSEVAKIRTAMKDLGVEKRCPGASWVEINKRVHVFAASDTYHPSYSQFHLLLAE 540

Query: 1231 XXGQLKL 1251
               QL+L
Sbjct: 541  LDDQLRL 547



 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           RAL  Y+ MLR  V P SY++SSLIKACT+     FG+ VHG IWK+G
Sbjct: 88  RALGFYIHMLRNNVMPNSYSFSSLIKACTLLMDSAFGKAVHGHIWKNG 135



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 36/160 (22%), Positives = 74/160 (46%)
 Frame = +1

Query: 226 NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
           N  I+  + L  V  ASS F+ M   ++  +  +I           A+  +  M    + 
Sbjct: 43  NQFISSCSALSYVDLASSTFAHMENPNAFVYNALIRGCGHCCYPDRALGFYIHMLRNNVM 102

Query: 406 SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIERSLVV 585
            ++ + +++I AC  L     G+ +H ++  NGF+  +++ + L++ Y+  G +  S  V
Sbjct: 103 PNSYSFSSLIKACTLLMDSAFGKAVHGHIWKNGFDSHMFVQTTLIEFYSTLGDVSGSRRV 162

Query: 586 FFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEKV 705
           F  + E+++F W ++I  L   G    A  +F  M  + +
Sbjct: 163 FDDMPERDVFAWTTMISALVRDGDMASAGNLFDEMPEKNI 202


>gb|EYU39274.1| hypothetical protein MIMGU_mgv1a004625mg [Mimulus guttatus]
          Length = 517

 Score =  452 bits (1162), Expect = e-124
 Identities = 212/365 (58%), Positives = 277/365 (75%)
 Frame = +1

Query: 157  RVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITC 336
            R GDL  AR +FDEMP+KN A+WN++I GY   G+V SA  LF  MP RD I+WTTMI C
Sbjct: 142  RAGDLDSARSVFDEMPEKNNASWNTIIHGYVEAGNVESAEELFRIMPKRDVISWTTMINC 201

Query: 337  YSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLD 516
            YS++K ++EA++LF++MK  G   D VTMATVISACAHLG L+ G+++H+YVM N F +D
Sbjct: 202  YSKHKLYREALELFDEMKRTGTRPDGVTMATVISACAHLGVLDQGKEMHLYVMQNRFKID 261

Query: 517  VYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEA 696
            V+IGSAL+DMYAKCG +ER+LVVF+KL +KNLFCW+S+I+GLA+HGY E+AL MF  M+ 
Sbjct: 262  VHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSSVIDGLAVHGYAEEALAMFDKMDK 321

Query: 697  EKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXX 876
            EK+EPN V FVSVL+ACTHAGL++EG+R F+ M   YSI P +EHYGCMVD         
Sbjct: 322  EKIEPNRVIFVSVLAACTHAGLVEEGNRRFLEMTSKYSILPEIEHYGCMVDLLCRVGLIE 381

Query: 877  XXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYA 1056
                 I+SM+++PNS+IWGALL GCKLH+ LEIA VA+ +LM LE  +SGY+ LL+N YA
Sbjct: 382  EALVLIRSMRMQPNSVIWGALLGGCKLHKNLEIARVAVDRLMILETDSSGYFTLLINMYA 441

Query: 1057 EANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXX 1236
            EAN+W +VAR+RATMKE+GV+K  PGSSW++++ ++H+F A D++HP             
Sbjct: 442  EANRWADVARIRATMKERGVEKILPGSSWIEVEKKMHQFAACDNYHPASQEIYLVLDVLD 501

Query: 1237 GQLKL 1251
             QLKL
Sbjct: 502  SQLKL 506



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 68/337 (20%), Positives = 132/337 (39%), Gaps = 65/337 (19%)
 Frame = +1

Query: 226  NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
            N  I   + +  + SA   FS++   +   +  +I  +    +  E ++ + DM   G++
Sbjct: 2    NQYITACSNVHSLDSAIFAFSQVHNPNVFVYNAIIGAFLNLFRPLEGLRYYVDMLRNGVT 61

Query: 406  SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIERSLVV 585
              + T + +I +C  L  +  G  +H  V+ NG  L V++ ++LVD Y+  G + +S  +
Sbjct: 62   PTSYTFSALIKSCRVLSVVGFGETVHGQVLKNGLALHVHVQTSLVDFYSSLGRVIQSRKM 121

Query: 586  FFKLREKNLFCWNSIIEGLA--------------------------MHGYGE-------- 663
            F ++ +++ F W+S+I   A                          +HGY E        
Sbjct: 122  FDEMTDRDGFAWSSMISAYARAGDLDSARSVFDEMPEKNNASWNTIIHGYVEAGNVESAE 181

Query: 664  ----------------------------KALEMFKMMEAEKVEPNGVTFVSVLSACTHAG 759
                                        +ALE+F  M+     P+GVT  +V+SAC H G
Sbjct: 182  ELFRIMPKRDVISWTTMINCYSKHKLYREALELFDEMKRTGTRPDGVTMATVISACAHLG 241

Query: 760  LLKEGHRCFISMIHD-YSISPGVEHYGCMVDXXXXXXXXXXXXXXIKSMKVEPNSIIWGA 936
            +L +G    + ++ + + I     H G  +               +     + N   W +
Sbjct: 242  VLDQGKEMHLYVMQNRFKID---VHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSS 298

Query: 937  LLNGCKLHRKLEIAEVALKKL--MNLEPGNSGYYALL 1041
            +++G  +H   E A     K+    +EP    + ++L
Sbjct: 299  VIDGLAVHGYAEEALAMFDKMDKEKIEPNRVIFVSVL 335



 Score = 63.2 bits (152), Expect = 4e-07
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = +3

Query: 3   IRALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +  L  Y++MLR  V+PTSYT+S+LIK+C + S +GFGE VHGQ+ K+G
Sbjct: 46  LEGLRYYVDMLRNGVTPTSYTFSALIKSCRVLSVVGFGETVHGQVLKNG 94


>gb|EYU25996.1| hypothetical protein MIMGU_mgv1a024459mg, partial [Mimulus guttatus]
          Length = 526

 Score =  450 bits (1157), Expect = e-123
 Identities = 211/365 (57%), Positives = 276/365 (75%)
 Frame = +1

Query: 157  RVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITC 336
            R GDL  AR +FDEMP+KN A+WN++I GY   G+V SA  LF  MP RD I+WTTMI C
Sbjct: 151  RAGDLDSARSVFDEMPEKNNASWNTIIHGYVEAGNVESADELFQIMPKRDVISWTTMINC 210

Query: 337  YSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLD 516
            YS++K ++EA++LF++MK  G   D VTMATVISACAHLG LE G+++H+YVM N F +D
Sbjct: 211  YSKHKLYREALELFDEMKRTGTRPDGVTMATVISACAHLGVLEQGKEMHLYVMQNRFKID 270

Query: 517  VYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEA 696
            V+IGSAL+DMYAKCG +ER+LVVF+KL +KNLFCW+S+I+GLA+HGY E+AL MF  M+ 
Sbjct: 271  VHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSSVIDGLAVHGYAEEALAMFDKMDK 330

Query: 697  EKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXX 876
            EK+EPN V FVSVL+ACTHAGL++EG+R F+ M   YSI P +EHYGCMVD         
Sbjct: 331  EKIEPNRVIFVSVLAACTHAGLVEEGNRRFLEMTSKYSILPEIEHYGCMVDLLCRVGLIE 390

Query: 877  XXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYA 1056
                 I+SM+++PNS+IWGALL GCKLH+ L+IA VA+ +LM LE  +SGY+ LL+N YA
Sbjct: 391  EALVLIRSMRLQPNSVIWGALLGGCKLHKNLDIARVAVDRLMILETDSSGYFTLLINMYA 450

Query: 1057 EANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXX 1236
            EAN+W +VAR+RA MKE+GV+K  PGSSW++++ ++H+F A D++HP             
Sbjct: 451  EANRWADVARIRAMMKERGVEKILPGSSWIEVEKKMHQFAACDNYHPASQEIYLVLDVLD 510

Query: 1237 GQLKL 1251
             QLKL
Sbjct: 511  SQLKL 515



 Score = 79.3 bits (194), Expect = 6e-12
 Identities = 69/337 (20%), Positives = 133/337 (39%), Gaps = 65/337 (19%)
 Frame = +1

Query: 226  NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
            N  I   + +  + SA   FS++   +   +  +I  +    +  E ++ + DM   G++
Sbjct: 11   NQYITACSNVHSLDSAIFAFSQVHNPNVFVYNAIIGAFLNLFRPLEGLRYYVDMLRNGLT 70

Query: 406  SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIERSLVV 585
              + T + +I +C  L  +  G  +H  V+ NG  L V++ ++LVD Y+  G + +S  +
Sbjct: 71   PTSYTFSALIKSCRVLSVVGFGETVHGQVLKNGLALHVHVQTSLVDFYSSLGKVIQSRKM 130

Query: 586  FFKLREKNLFCWNSIIEGLA--------------------------MHGYGE-------- 663
            F ++ E++ F W+S+I   A                          +HGY E        
Sbjct: 131  FDEMTERDGFAWSSMISAYARAGDLDSARSVFDEMPEKNNASWNTIIHGYVEAGNVESAD 190

Query: 664  ----------------------------KALEMFKMMEAEKVEPNGVTFVSVLSACTHAG 759
                                        +ALE+F  M+     P+GVT  +V+SAC H G
Sbjct: 191  ELFQIMPKRDVISWTTMINCYSKHKLYREALELFDEMKRTGTRPDGVTMATVISACAHLG 250

Query: 760  LLKEGHRCFISMIHD-YSISPGVEHYGCMVDXXXXXXXXXXXXXXIKSMKVEPNSIIWGA 936
            +L++G    + ++ + + I     H G  +               +     + N   W +
Sbjct: 251  VLEQGKEMHLYVMQNRFKID---VHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSS 307

Query: 937  LLNGCKLHRKLEIAEVALKKL--MNLEPGNSGYYALL 1041
            +++G  +H   E A     K+    +EP    + ++L
Sbjct: 308  VIDGLAVHGYAEEALAMFDKMDKEKIEPNRVIFVSVL 344



 Score = 62.0 bits (149), Expect = 9e-07
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +3

Query: 3   IRALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +  L  Y++MLR  ++PTSYT+S+LIK+C + S +GFGE VHGQ+ K+G
Sbjct: 55  LEGLRYYVDMLRNGLTPTSYTFSALIKSCRVLSVVGFGETVHGQVLKNG 103


>ref|XP_004491724.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Cicer arietinum]
          Length = 423

 Score =  446 bits (1146), Expect = e-122
 Identities = 211/349 (60%), Positives = 268/349 (76%), Gaps = 2/349 (0%)
 Frame = +1

Query: 154  VRVGDLLYARKLFDEMP-KKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMI 330
            VR  D+ +A KLFDEMP +KN ATWN++I GYA+LGD+     LFS++P +D I+WTT++
Sbjct: 44   VRNNDVEFAEKLFDEMPERKNTATWNAVIDGYAKLGDIEHVEVLFSKIPSKDIISWTTLM 103

Query: 331  TCYSQNKQFKEAVKLFEDMKTAG-ISSDAVTMATVISACAHLGALELGRDIHIYVMHNGF 507
            +CYS+NK++ E VKLF +M   G +  D VT+ TVISACAHLGAL LG+++H Y+M NGF
Sbjct: 104  SCYSKNKRYGEVVKLFHEMVNEGMVFPDEVTITTVISACAHLGALGLGKEVHFYLMVNGF 163

Query: 508  NLDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKM 687
             LDVYIGS+L+DMYAKCG +ERSL+VF+KLREKNLFCWNS+I+GLA HGY ++AL MF+ 
Sbjct: 164  GLDVYIGSSLIDMYAKCGCVERSLLVFYKLREKNLFCWNSMIDGLATHGYAKEALRMFEK 223

Query: 688  MEAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXX 867
            M  E + PNGVTFVS+L+ACTHAGL++EG   F SMI DY ISP VEHYGCMVD      
Sbjct: 224  MVMEGMRPNGVTFVSILTACTHAGLIEEGRCFFASMIEDYCISPQVEHYGCMVDLLSKGG 283

Query: 868  XXXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLN 1047
                    I+ M  EPN  IWGALLNGCK++R LEIA VA++ LM LEP NSG+Y+LL+N
Sbjct: 284  LLEDALEMIRGMGCEPNGFIWGALLNGCKVYRDLEIARVAVRNLMVLEPNNSGHYSLLVN 343

Query: 1048 TYAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHH 1194
             YAE N+W EVA++R  MK  GV+K+CPGSSW++++ E+H F ASD  H
Sbjct: 344  MYAEVNRWSEVAKIRTEMKHLGVEKRCPGSSWIELNKEIHVFAASDKFH 392


>ref|XP_006338375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            isoform X1 [Solanum tuberosum]
            gi|565342486|ref|XP_006338376.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At1g06145-like isoform X2 [Solanum tuberosum]
          Length = 558

 Score =  445 bits (1145), Expect = e-122
 Identities = 213/370 (57%), Positives = 275/370 (74%)
 Frame = +1

Query: 163  GDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYS 342
            GDL  ARKLFDEMP+K     N+MI G+A+ GDV SA  LF EM  +D I WTTMI CYS
Sbjct: 185  GDLGSARKLFDEMPEKITVACNAMINGFAKTGDVESAELLFKEMSRKDLIAWTTMINCYS 244

Query: 343  QNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVY 522
            QN+++  A+++F DMK+  I+ D VTM TVISACAHLG L+ G+++H+YVM  GF+L V+
Sbjct: 245  QNRKYGLAIEVFYDMKSNLITPDEVTMTTVISACAHLGVLDQGKEMHLYVMQKGFDLGVH 304

Query: 523  IGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEK 702
            IGSAL+DMYAKCGS+ERSL+VF+KLREKNLFCWNS+I+GLA+HGY E+AL +F  ME EK
Sbjct: 305  IGSALIDMYAKCGSLERSLLVFYKLREKNLFCWNSVIDGLAVHGYAEEALALFSRMEKEK 364

Query: 703  VEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXXXX 882
            V+PNG+TFVSVL+ACTH GL+++G + F+ M  DY I P +EHYGCMVD           
Sbjct: 365  VKPNGITFVSVLTACTHGGLVEKGRKNFLRMTQDYGIVPEMEHYGCMVDLLCKAGLLEEA 424

Query: 883  XXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYAEA 1062
               I+SM+VEPN++IWGALL GCKL + LEIA+VA+KKL  LEP NSGYY LL+N YA A
Sbjct: 425  LEIIRSMRVEPNAVIWGALLGGCKLQKNLEIAQVAVKKLSVLEPNNSGYYTLLVNMYANA 484

Query: 1063 NQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXXGQ 1242
            N+W EVAR+RA ++E G+ K+ PG SW++++ ++H+F A D++H              GQ
Sbjct: 485  NRWSEVARIRAFLRELGIGKEQPGFSWIELEKKIHQFAACDNYHHSSQEIYSLLDGLDGQ 544

Query: 1243 LKLSNGSTEL 1272
            LKL+    EL
Sbjct: 545  LKLAGQVQEL 554



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 65/313 (20%), Positives = 118/313 (37%), Gaps = 62/313 (19%)
 Frame = +1

Query: 226 NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMKTAGIS 405
           N  IA  + L +   AS  FS+M   +   +  +I  +       +A+ L+ DM      
Sbjct: 43  NQFIATCSALNNPDFASFAFSQMENPNVFVYNALIRAFVHCHSPHKALLLYIDMLRTQNI 102

Query: 406 SDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIERSLVV 585
             + T ++V+  C  +  L LG  IH  +   GF   V++ + L+D Y+  G ++ + +V
Sbjct: 103 PSSYTFSSVVKGCTLMCGLRLGECIHGQIWEYGFGTHVFVQTGLIDFYSNLGRVDLARLV 162

Query: 586 FFKLREKNLFCW-------------------------------NSIIEGLAMHGYGEKA- 669
           F ++ E++ F W                               N++I G A  G  E A 
Sbjct: 163 FDEMPERDNFAWAAMVSAHAGAGDLGSARKLFDEMPEKITVACNAMINGFAKTGDVESAE 222

Query: 670 ------------------------------LEMFKMMEAEKVEPNGVTFVSVLSACTHAG 759
                                         +E+F  M++  + P+ VT  +V+SAC H G
Sbjct: 223 LLFKEMSRKDLIAWTTMINCYSQNRKYGLAIEVFYDMKSNLITPDEVTMTTVISACAHLG 282

Query: 760 LLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXXXXXXXIKSMKVEPNSIIWGAL 939
           +L +G    + ++       GV     ++D                 ++ E N   W ++
Sbjct: 283 VLDQGKEMHLYVMQK-GFDLGVHIGSALIDMYAKCGSLERSLLVFYKLR-EKNLFCWNSV 340

Query: 940 LNGCKLHRKLEIA 978
           ++G  +H   E A
Sbjct: 341 IDGLAVHGYAEEA 353



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 25/48 (52%), Positives = 37/48 (77%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +AL LY++MLR +  P+SYT+SS++K CT+   L  GE +HGQIW++G
Sbjct: 88  KALLLYIDMLRTQNIPSSYTFSSVVKGCTLMCGLRLGECIHGQIWEYG 135


>ref|XP_004233665.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Solanum lycopersicum]
          Length = 494

 Score =  444 bits (1142), Expect = e-122
 Identities = 213/364 (58%), Positives = 274/364 (75%)
 Frame = +1

Query: 163  GDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYS 342
            GDL  ARKLFDEMP+K     N+MI GYA+ GDV SA  LF EM  +D I WTTMI CYS
Sbjct: 121  GDLGSARKLFDEMPEKITVACNAMINGYAKTGDVESAELLFKEMSRKDLIAWTTMINCYS 180

Query: 343  QNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVY 522
            QN+++ +A+++F +MK+  I+ D VTM TVISACAHLG L+ G+++H+YVM  GF+L V+
Sbjct: 181  QNRKYGQAIEVFYEMKSNLITPDEVTMTTVISACAHLGVLDQGKEMHLYVMQKGFDLGVH 240

Query: 523  IGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEK 702
            IGSAL+DMYAKCGS+ERSL+VF+KLREKNLFCWNS I+GLA+HGY E+AL +F  ME EK
Sbjct: 241  IGSALIDMYAKCGSLERSLLVFYKLREKNLFCWNSAIDGLAVHGYAEEALALFSRMEKEK 300

Query: 703  VEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXXXX 882
            V+PNG+TFVSVL+ACTHAGL+++G + F+SM  DY I P +EH+GCMV            
Sbjct: 301  VKPNGITFVSVLTACTHAGLVEKGRKNFLSMTQDYGIVPEMEHFGCMVYLLCKAGLLEEA 360

Query: 883  XXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYAEA 1062
               I+SM+VEPN++IWGALL GCKL + LEIA+VA+KKL  LEP NSGYY LL+N YA A
Sbjct: 361  LEVIRSMRVEPNAVIWGALLGGCKLQKNLEIAQVAVKKLSVLEPNNSGYYTLLVNMYANA 420

Query: 1063 NQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXXXXXGQ 1242
            N+W EVAR+RA ++E GV K+ PGSSW+++  ++H+F A D++H              GQ
Sbjct: 421  NRWSEVARIRAFLRELGVGKEQPGSSWIELKKKIHQFAACDNYHHSSQEIYSLLDGLDGQ 480

Query: 1243 LKLS 1254
            LKL+
Sbjct: 481  LKLA 484



 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 24/48 (50%), Positives = 37/48 (77%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +AL LY++MLR +  P+SYT+SS++K CT+   L  GE +HG+IW++G
Sbjct: 24  KALLLYIDMLRTQNIPSSYTFSSVVKGCTLMCGLRLGECIHGKIWEYG 71


>ref|XP_004511192.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Cicer arietinum]
          Length = 1049

 Score =  443 bits (1139), Expect = e-121
 Identities = 215/376 (57%), Positives = 270/376 (71%), Gaps = 2/376 (0%)
 Frame = +1

Query: 154  VRVGDLLYARKLFDEMP-KKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMI 330
            VR  D+  A KLFDEMP +KN ATWN +I GYA+LGD+     LFS++P +D I+WTT++
Sbjct: 670  VRNNDVESAEKLFDEMPERKNTATWNVVIDGYAKLGDIERVEVLFSKIPSKDIISWTTLM 729

Query: 331  TCYSQNKQFKEAVKLFEDMKTAG-ISSDAVTMATVISACAHLGALELGRDIHIYVMHNGF 507
             CYS+NK++ E VKLF +M   G +  D VT+ TVISACAHLGAL LG+++H Y+M NGF
Sbjct: 730  NCYSKNKRYGEVVKLFHEMVNEGMVFPDEVTITTVISACAHLGALGLGKEVHFYLMVNGF 789

Query: 508  NLDVYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKM 687
             LDVYIGS+L+DMYAKCG +ERSL+VF+KLREKNLFCWNS+I+GLA HGY ++AL MF+ 
Sbjct: 790  GLDVYIGSSLIDMYAKCGCVERSLLVFYKLREKNLFCWNSMIDGLATHGYAKEALRMFEK 849

Query: 688  MEAEKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXX 867
            M  E + PNGVTFVS+L+ACTHAG ++EG   F SMI DY ISP VEHYGCMVD      
Sbjct: 850  MVMEGIRPNGVTFVSILTACTHAGFIEEGRCFFASMIEDYCISPQVEHYGCMVDLLSKGG 909

Query: 868  XXXXXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLN 1047
                    I+ M  EPN  IWGALLNGCK++R LEIA VA + LM LEP NSG+Y+LL+N
Sbjct: 910  LLEDALEMIRGMGCEPNGFIWGALLNGCKVYRDLEIARVAFRNLMVLEPNNSGHYSLLVN 969

Query: 1048 TYAEANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHHPMXXXXXXXXX 1227
             YAE N+W EVA++R  M+  GV+K+CPGSSW++++ E+H F ASD  HP          
Sbjct: 970  MYAEVNRWSEVAKIRTEMRHLGVEKRCPGSSWIELNKEIHVFAASDKFHPSYGQVHLLLV 1029

Query: 1228 XXXGQLKLSNGSTELG 1275
                QL+L     E G
Sbjct: 1030 ELDEQLRLVEYVPESG 1045



 Score = 76.6 bits (187), Expect(2) = 3e-20
 Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 4/254 (1%)
 Frame = +1

Query: 211  NVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQNKQFKEAVKLFEDMK 390
            +V    +++  Y+ LG V  +  +F EM  RD   WTTMI+ + +N   + A KLF++M 
Sbjct: 627  HVFVQTTLVEFYSNLGQVCDSRKVFDEMSERDVYAWTTMISAHVRNNDVESAEKLFDEMP 686

Query: 391  TAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIE 570
                  +  T   VI                                   D YAK G IE
Sbjct: 687  E---RKNTATWNVVI-----------------------------------DGYAKLGDIE 708

Query: 571  RSLVVFFKLREKNLFCWNSIIEGLAMH-GYGEKALEMFKMMEAEKVEPNGVTFVSVLSAC 747
            R  V+F K+  K++  W +++   + +  YGE      +M+    V P+ VT  +V+SAC
Sbjct: 709  RVEVLFSKIPSKDIISWTTLMNCYSKNKRYGEVVKLFHEMVNEGMVFPDEVTITTVISAC 768

Query: 748  THAGLL---KEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXXXXXXXIKSMKVEPN 918
             H G L   KE H  F  M++ + +   V     ++D                 ++ E N
Sbjct: 769  AHLGALGLGKEVH--FYLMVNGFGLD--VYIGSSLIDMYAKCGCVERSLLVFYKLR-EKN 823

Query: 919  SIIWGALLNGCKLH 960
               W ++++G   H
Sbjct: 824  LFCWNSMIDGLATH 837



 Score = 50.8 bits (120), Expect(2) = 3e-20
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = +3

Query: 6   RALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
           +AL  Y+ ML+  V P+SY++SSLIKACT+ +    G+ +HG +WK+G
Sbjct: 576 KALLHYIHMLQNGVVPSSYSFSSLIKACTLLTDHVNGKTLHGHVWKNG 623



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 36/163 (22%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
 Frame = +1

Query: 226  NSMIAGYARLGDVISASSLFSEMPVRDSITWTTMIT----CYSQNKQFKEAVKLFEDMKT 393
            N  I   +    +  A+S F+++   +++ +  +I     C+S +K     + + ++   
Sbjct: 531  NQFITASSISSHINLATSTFTQIKKPNTLVYNALIKACVHCHSSHKALLHYIHMLQN--- 587

Query: 394  AGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYIGSALVDMYAKCGSIER 573
             G+   + + +++I AC  L     G+ +H +V  NGF+  V++ + LV+ Y+  G +  
Sbjct: 588  -GVVPSSYSFSSLIKACTLLTDHVNGKTLHGHVWKNGFSTHVFVQTTLVEFYSNLGQVCD 646

Query: 574  SLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEK 702
            S  VF ++ E++++ W ++I     +   E A ++F  M   K
Sbjct: 647  SRKVFDEMSERDVYAWTTMISAHVRNNDVESAEKLFDEMPERK 689


>ref|XP_006409153.1| hypothetical protein EUTSA_v10022616mg [Eutrema salsugineum]
            gi|557110315|gb|ESQ50606.1| hypothetical protein
            EUTSA_v10022616mg [Eutrema salsugineum]
          Length = 578

 Score =  422 bits (1084), Expect = e-115
 Identities = 201/343 (58%), Positives = 258/343 (75%)
 Frame = +1

Query: 166  DLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITCYSQ 345
            D+  A  L ++MP+KNVATWN +I GY +LG+V  A SLF++MPV+D I+WTTMI  YS+
Sbjct: 207  DMDSANHLANQMPEKNVATWNCLIDGYTKLGNVEIAESLFNQMPVKDIISWTTMINGYSR 266

Query: 346  NKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLDVYI 525
            NK++KE++ +F  M   GI  D VTM+TVISACAHLG L++G ++H+Y + NGF  DVYI
Sbjct: 267  NKRYKESIAVFYKMTEEGIIPDEVTMSTVISACAHLGVLDIGNEVHMYTVQNGFLHDVYI 326

Query: 526  GSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEAEKV 705
            GSALVDMY+KCGS+ R+L+VFF L +KNLFCWNSIIEGLA HGY ++AL MF  ME E V
Sbjct: 327  GSALVDMYSKCGSLNRALLVFFNLPKKNLFCWNSIIEGLAAHGYAQEALRMFAKMEMESV 386

Query: 706  EPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXXXXX 885
            +PN VTFVSVL+ACTHAGL++EG R + SMI DYSI   ++HYGCMVD            
Sbjct: 387  KPNAVTFVSVLTACTHAGLVEEGWRIYRSMIDDYSIVSNIKHYGCMVDLLSKAGLIHEAL 446

Query: 886  XXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYAEAN 1065
              I+SM+ EPN +IWGALL+GC+LH  LEIAE+A KKLM LEP NSGYY LL++ YA  N
Sbjct: 447  ELIESMEFEPNVVIWGALLDGCRLHNNLEIAEIAFKKLMVLEPMNSGYYLLLVSMYAREN 506

Query: 1066 QWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHH 1194
            +W +VA +R  M+E G++K CPG+S+++ID  VH F  +D  H
Sbjct: 507  RWRDVAEVRGRMRELGIEKICPGTSFIEIDKRVHMFAIADKSH 549



 Score = 62.0 bits (149), Expect = 9e-07
 Identities = 32/51 (62%), Positives = 35/51 (68%)
 Frame = +3

Query: 3   IRALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHGSC 155
           IRAL LY+ MLR  VSP+SYTYSSL+KAC   S   FGE V   IWK G C
Sbjct: 110 IRALGLYVRMLRYSVSPSSYTYSSLVKACAFDSV--FGELVQAHIWKFGFC 158


>ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
            lyrata] gi|297338164|gb|EFH68581.1| hypothetical protein
            ARALYDRAFT_311694 [Arabidopsis lyrata subsp. lyrata]
          Length = 1329

 Score =  420 bits (1080), Expect = e-114
 Identities = 202/346 (58%), Positives = 261/346 (75%)
 Frame = +1

Query: 157  RVGDLLYARKLFDEMPKKNVATWNSMIAGYARLGDVISASSLFSEMPVRDSITWTTMITC 336
            +V D+  A  L ++MP+KN ATWN +I GY RLG++  A SLF++MPV+D I+WTTMI  
Sbjct: 954  QVLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMING 1013

Query: 337  YSQNKQFKEAVKLFEDMKTAGISSDAVTMATVISACAHLGALELGRDIHIYVMHNGFNLD 516
            YS+NK+++EA+ +F  M   GI  D VTM+TVISACAHLG LE+G+++H+Y + NGF LD
Sbjct: 1014 YSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLD 1073

Query: 517  VYIGSALVDMYAKCGSIERSLVVFFKLREKNLFCWNSIIEGLAMHGYGEKALEMFKMMEA 696
            VYIGSALVDMY+KCGS+ER+L+VFF L +KNLFCWNSIIEGLA HG+ ++AL+MF  ME 
Sbjct: 1074 VYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEM 1133

Query: 697  EKVEPNGVTFVSVLSACTHAGLLKEGHRCFISMIHDYSISPGVEHYGCMVDXXXXXXXXX 876
            E V+PN VTFVSV +ACTHAGL++EG R + SMI DYSI   VEHYGCMV          
Sbjct: 1134 ESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIY 1193

Query: 877  XXXXXIKSMKVEPNSIIWGALLNGCKLHRKLEIAEVALKKLMNLEPGNSGYYALLLNTYA 1056
                 I SM+ EPN++IWGALL+GC++H+ LEIAE+A  KLM LEP NSGYY LL++ YA
Sbjct: 1194 EALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYA 1253

Query: 1057 EANQWGEVARLRATMKEQGVDKKCPGSSWLQIDGEVHEFVASDHHH 1194
            E N+W +VA +R  M+E G++K CPG+S ++ID   H F A+D  H
Sbjct: 1254 EQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSH 1299



 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 29/49 (59%), Positives = 35/49 (71%)
 Frame = +3

Query: 3    IRALELYLEMLRAEVSPTSYTYSSLIKACTIASALGFGEGVHGQIWKHG 149
            IR+LE Y+ MLR  VSP+SYTYSSL++A   AS  GFGE +   IWK G
Sbjct: 860  IRSLEFYVRMLRDSVSPSSYTYSSLVQASAFAS--GFGESLQAHIWKFG 906