BLASTX nr result
ID: Cocculus23_contig00017607
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00017607
(273 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004239718.1| PREDICTED: ribosome biogenesis protein TSR3 ... 93 4e-17
ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 ... 92 6e-17
emb|CBI21472.3| unnamed protein product [Vitis vinifera] 92 7e-17
ref|XP_006345858.1| PREDICTED: ribosome biogenesis protein TSR3 ... 91 1e-16
ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 ... 91 2e-16
ref|XP_007048052.1| RNase L inhibitor protein-related isoform 1 ... 89 5e-16
ref|XP_002528990.1| conserved hypothetical protein [Ricinus comm... 88 1e-15
ref|XP_006288455.1| hypothetical protein CARUB_v10001716mg [Caps... 87 2e-15
gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis] 87 2e-15
gb|AFK34770.1| unknown [Lotus japonicus] 87 2e-15
ref|XP_006464289.1| PREDICTED: ribosome biogenesis protein TSR3 ... 87 3e-15
ref|XP_006428125.1| hypothetical protein CICLE_v10027591mg [Citr... 87 3e-15
ref|XP_006649556.1| PREDICTED: ribosome biogenesis protein TSR3 ... 86 5e-15
ref|XP_007205734.1| hypothetical protein PRUPE_ppa010103mg [Prun... 86 7e-15
ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis prot... 85 9e-15
ref|XP_003558599.1| PREDICTED: probable ribosome biogenesis prot... 85 1e-14
gb|ACK44518.1| AT5G10070-like protein [Arabidopsis arenosa] 84 2e-14
gb|ACF86571.1| unknown [Zea mays] gi|413956717|gb|AFW89366.1| hy... 83 5e-14
ref|XP_004985356.1| PREDICTED: ribosome biogenesis protein TSR3 ... 82 1e-13
ref|XP_004304839.1| PREDICTED: ribosome biogenesis protein TSR3-... 82 1e-13
>ref|XP_004239718.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Solanum
lycopersicum]
Length = 268
Score = 92.8 bits (229), Expect = 4e-17
Identities = 49/82 (59%), Positives = 58/82 (70%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MG NK +R ++H+ SH RGQ S R +D ESLP E ++EEE P IQLAMWD
Sbjct: 1 MGGNKQRRSKSHHHSH-RGQSSRTRQ--PDDSFKVEESLPGEFLEEEEPAGPKIQLAMWD 57
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RFGLL+E
Sbjct: 58 FGQCDAKRCTGRKLARFGLLRE 79
>ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis
sativus]
Length = 265
Score = 92.4 bits (228), Expect = 6e-17
Identities = 48/82 (58%), Positives = 56/82 (68%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
M +NK +R +NH+ +RGQ + F GED E LP + EEE PNIQLAMWD
Sbjct: 1 MSHNKTRRFKNHHP--RRGQSTRGHKFIGED-----ECLPVDPANEEEPTRPNIQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RFGLLKE
Sbjct: 54 FGQCDAKRCTGRKLARFGLLKE 75
>emb|CBI21472.3| unnamed protein product [Vitis vinifera]
Length = 326
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/82 (58%), Positives = 57/82 (69%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MG+NK +R + H S RGQ S F++ E D SLP++ +EEE P +QLAMWD
Sbjct: 1 MGHNKARRFKGHQS--HRGQSSRFQEPLREYD-----SLPTDQAEEEELSVPKVQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKLSRFGLLKE
Sbjct: 54 FGQCDAKRCTGRKLSRFGLLKE 75
>ref|XP_006345858.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Solanum
tuberosum]
Length = 268
Score = 91.3 bits (225), Expect = 1e-16
Identities = 49/82 (59%), Positives = 57/82 (69%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MG NK +R + ++ SH RGQ S R +D ESLP E V+EEE P IQLAMWD
Sbjct: 1 MGGNKQRRSKTYHHSH-RGQSSRTRQ--PDDSFKVEESLPGEFVEEEEPTGPKIQLAMWD 57
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RFGLL+E
Sbjct: 58 FGQCDAKRCTGRKLARFGLLRE 79
>ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis
sativus]
Length = 265
Score = 90.5 bits (223), Expect = 2e-16
Identities = 47/82 (57%), Positives = 55/82 (67%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
M +NK +R +NH+ +RGQ + F GED E LP + EEE PNI LAMWD
Sbjct: 1 MSHNKTRRFKNHHP--RRGQSTRGHKFIGED-----ECLPVDPANEEEPTRPNIHLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RFGLLKE
Sbjct: 54 FGQCDAKRCTGRKLARFGLLKE 75
>ref|XP_007048052.1| RNase L inhibitor protein-related isoform 1 [Theobroma cacao]
gi|590707611|ref|XP_007048053.1| RNase L inhibitor
protein-related isoform 1 [Theobroma cacao]
gi|508700313|gb|EOX92209.1| RNase L inhibitor
protein-related isoform 1 [Theobroma cacao]
gi|508700314|gb|EOX92210.1| RNase L inhibitor
protein-related isoform 1 [Theobroma cacao]
Length = 261
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/82 (56%), Positives = 55/82 (67%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MG+NK +R + H+S RGQ S F EDD SLP + EE+ P IQLAMWD
Sbjct: 1 MGHNKPRRFKTHHS--HRGQSSRTHQFQREDD-----SLPPDQPPEEDPNVPKIQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RFG+LK+
Sbjct: 54 FGQCDAKRCTGRKLARFGMLKD 75
>ref|XP_002528990.1| conserved hypothetical protein [Ricinus communis]
gi|223531580|gb|EEF33409.1| conserved hypothetical
protein [Ricinus communis]
Length = 285
Score = 87.8 bits (216), Expect = 1e-15
Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLA-PNIQLAMW 204
MG+NK +R ++H+S+ RGQ S ED ESLPS+ V EE++ + P +QLAMW
Sbjct: 1 MGHNKPRRSKSHHSN--RGQSSRTNLLERED-----ESLPSDQVPEEDTNSTPRVQLAMW 53
Query: 205 DFAQCDAKRCTGRKLSRFGLLKE 273
DF QCDAKRCTGRKL RFGLLKE
Sbjct: 54 DFGQCDAKRCTGRKLGRFGLLKE 76
>ref|XP_006288455.1| hypothetical protein CARUB_v10001716mg [Capsella rubella]
gi|482557161|gb|EOA21353.1| hypothetical protein
CARUB_v10001716mg [Capsella rubella]
Length = 269
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/82 (57%), Positives = 54/82 (65%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MGY K KR R NS+ RGQ S + ED ESLP + E+E+ P +QLAMWD
Sbjct: 1 MGYGKNKRSRGGNSN--RGQTSRTDNLGRED-----ESLPRDQEPEDEAPVPKVQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RF LLKE
Sbjct: 54 FGQCDAKRCTGRKLARFNLLKE 75
>gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis]
Length = 449
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/82 (56%), Positives = 55/82 (67%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MGY K +R R NS+ GQ S + ED ESLP + E+E++ PN+QLAMWD
Sbjct: 1 MGYGKHRRSRGGNSNP--GQTSRTENIGRED-----ESLPHDPGSEDEAVVPNVQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RF LLKE
Sbjct: 54 FGQCDAKRCTGRKLARFNLLKE 75
>gb|AFK34770.1| unknown [Lotus japonicus]
Length = 233
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSH-QRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMW 204
MG NK +R R H +H Q + + S EDD+ SLP G +EE P I+LAMW
Sbjct: 1 MGNNKQQRFRTHRQNHAQSSRHQQQQQLSLEDDSQT--SLPESGEHQEELTTPKIKLAMW 58
Query: 205 DFAQCDAKRCTGRKLSRFGLLKE 273
DF QCDAK+CTGRKLSRFG+LKE
Sbjct: 59 DFGQCDAKKCTGRKLSRFGMLKE 81
>ref|XP_006464289.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Citrus
sinensis]
Length = 264
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/82 (54%), Positives = 54/82 (65%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MG+NK +R +NH+S RGQ S ED ESLP + E++ P +QLAMWD
Sbjct: 1 MGHNKPRRFKNHHS--HRGQSSRCHQPDRED-----ESLPPDQAPEDDPQVPKVQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RF LLKE
Sbjct: 54 FGQCDAKRCTGRKLARFNLLKE 75
>ref|XP_006428125.1| hypothetical protein CICLE_v10027591mg [Citrus clementina]
gi|557530115|gb|ESR41365.1| hypothetical protein
CICLE_v10027591mg [Citrus clementina]
Length = 279
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/82 (54%), Positives = 54/82 (65%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MG+NK +R +NH+S RGQ S ED ESLP + E++ P +QLAMWD
Sbjct: 1 MGHNKPRRFKNHHS--HRGQSSRCHQPDRED-----ESLPPDQAPEDDPQVPKVQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RF LLKE
Sbjct: 54 FGQCDAKRCTGRKLARFNLLKE 75
>ref|XP_006649556.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Oryza
brachyantha]
Length = 270
Score = 85.9 bits (211), Expect = 5e-15
Identities = 48/82 (58%), Positives = 57/82 (69%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MGYN+ +R R +SS +R + ++ SG+D G SLP + EEE AP IQLAMWD
Sbjct: 1 MGYNR-RRGRGSSSSTRRSK----QEASGDDG--PGTSLPRQDDIEEEPKAPRIQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCD KRCTGRKLSRFGLLKE
Sbjct: 54 FGQCDVKRCTGRKLSRFGLLKE 75
>ref|XP_007205734.1| hypothetical protein PRUPE_ppa010103mg [Prunus persica]
gi|462401376|gb|EMJ06933.1| hypothetical protein
PRUPE_ppa010103mg [Prunus persica]
Length = 264
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/82 (57%), Positives = 53/82 (64%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MG NK R +NH RGQ S + H+G+SLPS+ EEE P IQLAMWD
Sbjct: 1 MGNNK--RFKNHKP--HRGQSSRTNNHLP----HEGDSLPSDQATEEEPTGPKIQLAMWD 52
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAK+CTGRKLSRFG LKE
Sbjct: 53 FGQCDAKKCTGRKLSRFGFLKE 74
>ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
[Vitis vinifera]
Length = 302
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDN------HQGESLPSEGVKEEESLAPNI 189
MG+NK +R + H S RGQ S F++ E D+ G + + +EEE P +
Sbjct: 1 MGHNKARRFKGHQS--HRGQSSRFQEPLREYDSLPTDQVAMGFNFCAVAAEEEELSVPKV 58
Query: 190 QLAMWDFAQCDAKRCTGRKLSRFGLLKE 273
QLAMWDF QCDAKRCTGRKLSRFGLLKE
Sbjct: 59 QLAMWDFGQCDAKRCTGRKLSRFGLLKE 86
>ref|XP_003558599.1| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
[Brachypodium distachyon]
Length = 271
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/83 (56%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLP-SEGVKEEESLAPNIQLAMW 204
MGY++ +R R +SS +R + D+ G SLP E EEES P IQLAMW
Sbjct: 1 MGYSRHRRGRGSSSSSRRTKQE------ASCDDGPGTSLPRQEDSTEEESNVPKIQLAMW 54
Query: 205 DFAQCDAKRCTGRKLSRFGLLKE 273
DF QCDAKRCTGRKLSRFGLLKE
Sbjct: 55 DFGQCDAKRCTGRKLSRFGLLKE 77
>gb|ACK44518.1| AT5G10070-like protein [Arabidopsis arenosa]
Length = 267
Score = 84.3 bits (207), Expect = 2e-14
Identities = 46/82 (56%), Positives = 53/82 (64%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MGY K R R NS+ RGQ S + ED ESLP + E+E+ P +QLAMWD
Sbjct: 1 MGYGKHNRSRGGNSN--RGQTSRTDNLGRED-----ESLPLDQEPEDEAPVPKVQLAMWD 53
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCDAKRCTGRKL+RF LLKE
Sbjct: 54 FGQCDAKRCTGRKLARFNLLKE 75
>gb|ACF86571.1| unknown [Zea mays] gi|413956717|gb|AFW89366.1| hypothetical protein
ZEAMMB73_487834 [Zea mays] gi|413956718|gb|AFW89367.1|
hypothetical protein ZEAMMB73_487834 [Zea mays]
Length = 271
Score = 82.8 bits (203), Expect = 5e-14
Identities = 44/82 (53%), Positives = 52/82 (63%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MGYN+ +R R +SS R + + DD+ G SLP + E+E IQLAMWD
Sbjct: 1 MGYNRHRRGRGSSSSSSRRT----KQEASCDDDGLGTSLPRQEGTEDELKGSRIQLAMWD 56
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCD KRCTGRKLSRFGLLKE
Sbjct: 57 FGQCDVKRCTGRKLSRFGLLKE 78
>ref|XP_004985356.1| PREDICTED: ribosome biogenesis protein TSR3 homolog isoform X2
[Setaria italica]
Length = 326
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/82 (53%), Positives = 49/82 (59%)
Frame = +1
Query: 28 MGYNKGKRHRNHNSSHQRGQPSYFRDFSGEDDNHQGESLPSEGVKEEESLAPNIQLAMWD 207
MGYN+ +R R +SS R D+ G SLP + EEE IQLAMWD
Sbjct: 1 MGYNRHRRGRGSSSSSSRRAKQ-----EASMDDGPGTSLPRQEDTEEEFKGSRIQLAMWD 55
Query: 208 FAQCDAKRCTGRKLSRFGLLKE 273
F QCD KRCTGRKLSRFGLLKE
Sbjct: 56 FGQCDVKRCTGRKLSRFGLLKE 77
>ref|XP_004304839.1| PREDICTED: ribosome biogenesis protein TSR3-like [Fragaria vesca
subsp. vesca]
Length = 237
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/78 (57%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +1
Query: 46 KRHRNHNSSHQ-RGQPSYFRDFSGEDDNHQGESLPSEG-VKEEESLAPNIQLAMWDFAQC 219
KR +NH H RG+ S R+ DD ESLPS+ +EE + P IQL MWDF QC
Sbjct: 5 KRFKNHKPHHNHRGESSRNRNQLPHDD----ESLPSDQQATDEEPIRPKIQLVMWDFGQC 60
Query: 220 DAKRCTGRKLSRFGLLKE 273
DAKRCTGRKLSRFG LKE
Sbjct: 61 DAKRCTGRKLSRFGFLKE 78