BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00017574
         (303 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         139   4e-31
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         139   4e-31
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   139   4e-31
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   135   5e-30
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   135   8e-30
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...   134   2e-29
ref|XP_004515136.1| PREDICTED: genome polyprotein-like [Cicer ar...   130   2e-28
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar...   129   4e-28
ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer ar...   128   9e-28
ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer ar...   125   5e-27
ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer ar...   125   6e-27
ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer ar...   125   8e-27
ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, par...   120   3e-25
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein...   119   3e-25
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...   117   1e-24
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   116   3e-24
ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer ar...   114   1e-23
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            113   2e-23
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   113   2e-23
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   113   2e-23

>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/99 (66%), Positives = 77/99 (77%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            EC  L+ QGLI+PTTS WACQAFYVEK SE+ R KKRLVIDY+PLNMFL+D KFPLP+  
Sbjct: 1247 ECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLPRRQ 1306

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            S    L  A  FSKFD+K+GFWQLGI P+++ K A CIP
Sbjct: 1307 SMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIP 1345


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/99 (66%), Positives = 77/99 (77%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            EC  L+ QGLI+PTTS WACQAFYVEK SE+ R KKRLVIDY+PLNMFL+D KFPLP+  
Sbjct: 1345 ECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLPRRQ 1404

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            S    L  A  FSKFD+K+GFWQLGI P+++ K A CIP
Sbjct: 1405 SMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIP 1443


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/99 (66%), Positives = 77/99 (77%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            EC  L+ QGLI+PTTS WACQAFYVEK SE+ R KKRLVIDY+PLNMFL+D KFPLP+  
Sbjct: 1358 ECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLPRRQ 1417

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            S    L  A  FSKFD+K+GFWQLGI P+++ K A CIP
Sbjct: 1418 SMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIP 1456


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  135 bits (341), Expect = 5e-30
 Identities = 66/99 (66%), Positives = 76/99 (76%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ QGLI+PT S+WACQAFYVEK SE  R KKRLVIDYKPLN FLKD KFP+PK +
Sbjct: 569 ECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIPKTS 628

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S    L  A  +SKFD+K+GFWQLGI P D+ K A CIP
Sbjct: 629 SLNTFLKDAQVYSKFDMKSGFWQLGIDPNDRYKTAFCIP 667


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  135 bits (339), Expect = 8e-30
 Identities = 65/99 (65%), Positives = 76/99 (76%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            EC+ L+ QGLI+PT S+WACQAFYVEK SE  R KKRLVIDYKPLN FLKD KFP+PK +
Sbjct: 1359 ECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIPKTS 1418

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            S  + L  A  +S FD+K+GFWQLGI P D+ K A CIP
Sbjct: 1419 SLNIFLKDAQVYSNFDMKSGFWQLGINPNDRYKTAFCIP 1457


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score =  134 bits (336), Expect = 2e-29
 Identities = 64/99 (64%), Positives = 77/99 (77%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            EC+ L+ QGLI+PT  +WACQAFYVEK S+  R KKR+VIDYKPLN FLKD KFP+PK +
Sbjct: 1304 ECNQLLQQGLIEPTKFEWACQAFYVEKRSKKIRVKKRMVIDYKPLNHFLKDGKFPIPKTS 1363

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            S  + L  A  +SKFDIK+GFWQLGI P D+ K+A CIP
Sbjct: 1364 SLNIFLKDAQIYSKFDIKSGFWQLGIDPKDRYKMAFCIP 1402


>ref|XP_004515136.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 163

 Score =  130 bits (326), Expect = 2e-28
 Identities = 64/99 (64%), Positives = 75/99 (75%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ QGLI+PT S+WACQAFYVEK SE  R KKRLVIDYKPLN FLKD KFP+ K +
Sbjct: 12  ECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPILKTS 71

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S  + L  A  +SKFD+K+GFW+LGI P D  K A CIP
Sbjct: 72  SLNIFLKDAQIYSKFDMKSGFWKLGIDPKDCYKTAFCIP 110


>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 803

 Score =  129 bits (324), Expect = 4e-28
 Identities = 63/99 (63%), Positives = 74/99 (74%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ QGLI+ T  +WACQAFYVEK SE  R KKRL IDYKPLN FLKD KFP+PK +
Sbjct: 435 ECNQLLQQGLIELTKFEWACQAFYVEKRSEKIRGKKRLAIDYKPLNHFLKDDKFPIPKTS 494

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S  + L  A  +SKFD+K+GFWQLGI P D+ K A CIP
Sbjct: 495 SLNIFLKDAQIYSKFDMKSGFWQLGIDPNDRYKTAFCIP 533


>ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 335

 Score =  128 bits (321), Expect = 9e-28
 Identities = 64/99 (64%), Positives = 74/99 (74%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ QGLI+PT S+WACQAFYVEK SE  R KKRLVIDYKPLN FLKD KF + K +
Sbjct: 177 ECNQLLKQGLIEPTKSEWACQAFYVEKRSEKVRRKKRLVIDYKPLNHFLKDDKFLISKTS 236

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S  + L  A  +SKFD+K+GFWQLGI P D  K A CIP
Sbjct: 237 SLNIFLKDAQIYSKFDMKSGFWQLGIDPKDCYKTAFCIP 275


>ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 293

 Score =  125 bits (315), Expect = 5e-27
 Identities = 61/99 (61%), Positives = 73/99 (73%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ QGLI+ T S+WACQA YVEK SE  R +KRLVIDYKPLN FLKD KFP+PK +
Sbjct: 177 ECNQLLQQGLIESTKSEWACQAIYVEKRSEKIRGRKRLVIDYKPLNHFLKDDKFPIPKTS 236

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S  + L  A  +SKF +K+GFWQLGI P D+ K   CIP
Sbjct: 237 SLNIFLKDAQIYSKFYMKSGFWQLGIDPKDRYKTVFCIP 275


>ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 211

 Score =  125 bits (314), Expect = 6e-27
 Identities = 62/99 (62%), Positives = 73/99 (73%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ QGLI+ T S+WACQAFYVEK SE  R KKRLVIDYKPLN FLKD KFP+ K +
Sbjct: 88  ECNQLLKQGLIELTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPILKTS 147

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S  + L  A+ +SKFD K GFWQL + P D+ K A CIP
Sbjct: 148 SLNIFLKDAHIYSKFDTKFGFWQLRVDPKDRYKTAFCIP 186


>ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 221

 Score =  125 bits (313), Expect = 8e-27
 Identities = 60/99 (60%), Positives = 74/99 (74%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ QGL++PT S+WACQAFYVEK SE  R KKRLVI YKPLN FLKD KF + K +
Sbjct: 106 ECNQLLKQGLVEPTKSEWACQAFYVEKRSEKMRGKKRLVIHYKPLNHFLKDDKFLILKTS 165

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S  + L  A  +SKFD+ +GFWQLG+ P D+ K A+CIP
Sbjct: 166 SLNIFLKDAQIYSKFDMNSGFWQLGVDPKDRYKTAICIP 204


>ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, partial [Eutrema
           salsugineum] gi|557097093|gb|ESQ37601.1| hypothetical
           protein EUTSA_v100029341mg, partial [Eutrema
           salsugineum]
          Length = 735

 Score =  120 bits (300), Expect = 3e-25
 Identities = 55/99 (55%), Positives = 71/99 (71%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           ECD L+ QG++  T S WAC+AFYV   +E  R K RLVIDYKPLN +L+D+KFPLP   
Sbjct: 445 ECDQLVKQGVVSSTNSPWACKAFYVNNRAEQARGKLRLVIDYKPLNQYLQDVKFPLPIRK 504

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           + +  L GA  FSKFD+K+GFWQLG+ P ++ K A C+P
Sbjct: 505 ALLQHLQGATIFSKFDLKSGFWQLGVHPDERYKTAFCLP 543


>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
          Length = 758

 Score =  119 bits (299), Expect = 3e-25
 Identities = 58/98 (59%), Positives = 70/98 (71%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           E   L N+GLI+ TTS WAC+AFYV K +E  R K RLVI+Y+PLN FL D KFPLP+ N
Sbjct: 12  ELQQLTNEGLIENTTSPWACEAFYVNKRAEQVRGKLRLVINYQPLNNFLADDKFPLPRRN 71

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCI 6
           +    L  A+ FSKFD+KAGFWQLGI P ++PK   CI
Sbjct: 72  TLFSQLSNAHVFSKFDLKAGFWQLGIHPDERPKTGFCI 109


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
            gi|557110784|gb|ESQ51075.1| hypothetical protein
            EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score =  117 bits (294), Expect = 1e-24
 Identities = 60/99 (60%), Positives = 68/99 (68%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            E + L  +GLIK TTS WAC+AFYV K +E  R K RLVI+Y+PLN FL D KFPLPK  
Sbjct: 848  EVNLLQKEGLIKTTTSPWACEAFYVNKKAEQVRGKLRLVINYQPLNHFLADDKFPLPKRE 907

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
                 L  A  FSKFD+KAGFWQLGI P D+PK   CIP
Sbjct: 908  VLFQRLPQAQVFSKFDLKAGFWQLGIKPEDRPKTGFCIP 946


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/99 (59%), Positives = 69/99 (69%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            E + L  +GLI+ TTS WAC+AFYV K +E  R K RLVI+Y+PLN FL D KFPLPK  
Sbjct: 1251 EVNLLQKEGLIEKTTSPWACEAFYVNKRAEQVRGKLRLVINYQPLNHFLADDKFPLPKRE 1310

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
                 L  A  FSKFD+KAGFWQLGI P D+PK + CIP
Sbjct: 1311 VLFQRLPQAQVFSKFDLKAGFWQLGIKPEDRPKTSFCIP 1349


>ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 415

 Score =  114 bits (286), Expect = 1e-23
 Identities = 56/99 (56%), Positives = 68/99 (68%)
 Frame = -2

Query: 299 ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
           EC+ L+ Q LI+PT  +W  QAFYVEK SE  R K  LVIDYKPLN FLKD KFP+ K +
Sbjct: 245 ECNQLLKQDLIEPTKYEWVGQAFYVEKRSEKIRGKNMLVIDYKPLNHFLKDDKFPILKTS 304

Query: 119 SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
           S  + L  A  +SKFD+K+GFWQ G+ P D+ K   CIP
Sbjct: 305 SLNIFLKDAQIYSKFDMKSGFWQFGVDPKDRYKTVFCIP 343


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/99 (56%), Positives = 68/99 (68%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            ECD L    LI+P+ S WAC+AFYV K SE  R K RLVI+Y+PLN FL+D KFP+P   
Sbjct: 1405 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKL 1464

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            +    L  A  FSKFD+K+GFWQLGI P ++PK   CIP
Sbjct: 1465 TLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIP 1503


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/99 (56%), Positives = 68/99 (68%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            ECD L    LI+P+ S WAC+AFYV K SE  R K RLVI+Y+PLN FL+D KFP+P   
Sbjct: 1405 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKL 1464

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            +    L  A  FSKFD+K+GFWQLGI P ++PK   CIP
Sbjct: 1465 TLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIP 1503


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/99 (56%), Positives = 68/99 (68%)
 Frame = -2

Query: 299  ECDSLINQGLIKPTTSDWACQAFYVEKCSELCRDKKRLVIDYKPLNMFLKDMKFPLPKIN 120
            ECD L    LI+P+ S WAC+AFYV K SE  R K RLVI+Y+PLN FL+D KFP+P   
Sbjct: 1404 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKL 1463

Query: 119  SQVLMLGGAY*FSKFDIKAGFWQLGIVPADKPKIALCIP 3
            +    L  A  FSKFD+K+GFWQLGI P ++PK   CIP
Sbjct: 1464 TLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIP 1502