BLASTX nr result
ID: Cocculus23_contig00017512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00017512
(493 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283566.1| PREDICTED: chlorophyll a-b binding protein 4... 337 1e-90
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa] 336 2e-90
gb|AFK40061.1| unknown [Medicago truncatula] 336 2e-90
ref|XP_002515206.1| chlorophyll A/B binding protein, putative [R... 336 2e-90
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach... 336 2e-90
gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense] 336 2e-90
dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein... 335 4e-90
ref|XP_002524616.1| chlorophyll A/B binding protein, putative [R... 335 4e-90
gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brach... 335 5e-90
ref|XP_002519724.1| chlorophyll A/B binding protein, putative [R... 334 7e-90
ref|NP_001266111.1| chlorophyll a-b binding protein AB80, chloro... 334 9e-90
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro... 334 9e-90
ref|XP_006856963.1| hypothetical protein AMTR_s00189p00032350 [A... 334 9e-90
pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-har... 334 9e-90
gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [... 334 9e-90
ref|XP_006467511.1| PREDICTED: chlorophyll a-b binding protein 3... 333 1e-89
ref|XP_006467509.1| PREDICTED: chlorophyll a-b binding protein 3... 333 1e-89
ref|XP_006368026.1| PREDICTED: chlorophyll a-b binding protein 1... 333 1e-89
ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1... 333 1e-89
ref|XP_006365560.1| PREDICTED: chlorophyll a-b binding protein 1... 333 1e-89
>ref|XP_002283566.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera] gi|147799091|emb|CAN74831.1| hypothetical
protein VITISV_023674 [Vitis vinifera]
Length = 270
Score = 337 bits (863), Expect = 1e-90
Identities = 158/164 (96%), Positives = 163/164 (99%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 57 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 116
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELLSRNGV+FGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWATQVILMGAV
Sbjct: 117 CVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVILMGAV 176
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 177 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 220
>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 336 bits (861), Expect = 2e-90
Identities = 159/164 (96%), Positives = 163/164 (99%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 53 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 112
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELLSRNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV
Sbjct: 113 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 172
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKE+K
Sbjct: 173 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELK 216
>gb|AFK40061.1| unknown [Medicago truncatula]
Length = 266
Score = 336 bits (861), Expect = 2e-90
Identities = 159/164 (96%), Positives = 163/164 (99%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 53 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 112
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELLSRNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV
Sbjct: 113 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 172
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKE+K
Sbjct: 173 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELK 216
>ref|XP_002515206.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545686|gb|EEF47190.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 267
Score = 336 bits (861), Expect = 2e-90
Identities = 156/164 (95%), Positives = 163/164 (99%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 54 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWATQV+LMGAV
Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAV 173
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 174 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217
>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 336 bits (861), Expect = 2e-90
Identities = 156/164 (95%), Positives = 164/164 (100%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 54 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWATQV+LMGAV
Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVLLMGAV 173
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE++DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 174 EGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217
>gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 336 bits (861), Expect = 2e-90
Identities = 159/164 (96%), Positives = 163/164 (99%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 53 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 112
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELLSRNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV
Sbjct: 113 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 172
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKE+K
Sbjct: 173 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELK 216
>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
[Lactuca sativa]
Length = 266
Score = 335 bits (859), Expect = 4e-90
Identities = 158/164 (96%), Positives = 163/164 (99%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALG
Sbjct: 53 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALG 112
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV
Sbjct: 113 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 172
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 173 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 216
>ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536169|gb|EEF37824.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 265
Score = 335 bits (859), Expect = 4e-90
Identities = 156/164 (95%), Positives = 163/164 (99%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 52 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAV
Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAV 171
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYRVAGGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 172 EGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIK 215
>gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brachiata]
Length = 267
Score = 335 bits (858), Expect = 5e-90
Identities = 158/164 (96%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGE PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 54 PDRVKYLGPFSGEPPSYLTGELPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVILMGAV
Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAV 173
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYRVAGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 174 EGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217
>ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223541141|gb|EEF42697.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 265
Score = 334 bits (857), Expect = 7e-90
Identities = 156/164 (95%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 52 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV
Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 171
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYRVAGGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 172 EGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIK 215
>ref|NP_001266111.1| chlorophyll a-b binding protein AB80, chloroplastic-like [Cicer
arietinum] gi|3928140|emb|CAA10284.1| chlorophyll a/b
binding protein [Cicer arietinum]
Length = 266
Score = 334 bits (856), Expect = 9e-90
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 53 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 112
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELLSRNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAV
Sbjct: 113 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAV 172
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+K
Sbjct: 173 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELK 216
>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 334 bits (856), Expect = 9e-90
Identities = 158/164 (96%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAV
Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAV 173
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 174 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217
>ref|XP_006856963.1| hypothetical protein AMTR_s00189p00032350 [Amborella trichopoda]
gi|548860998|gb|ERN18430.1| hypothetical protein
AMTR_s00189p00032350 [Amborella trichopoda]
Length = 268
Score = 334 bits (856), Expect = 9e-90
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 55 PDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 114
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELLSRNGV+FGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA+QVILMGAV
Sbjct: 115 CVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAV 174
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 175 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 218
>pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of
Spinach Major Light-harvesting Complex At 2.72 Angstrom
Resolution gi|47168890|pdb|1RWT|C Chain C, Crystal
Structure Of Spinach Major Light-harvesting Complex At
2.72 Angstrom Resolution gi|47168891|pdb|1RWT|D Chain D,
Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of
Spinach Major Light-harvesting Complex At 2.72 Angstrom
Resolution gi|47168893|pdb|1RWT|F Chain F, Crystal
Structure Of Spinach Major Light-harvesting Complex At
2.72 Angstrom Resolution gi|47168894|pdb|1RWT|G Chain G,
Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of
Spinach Major Light-harvesting Complex At 2.72 Angstrom
Resolution gi|47168896|pdb|1RWT|I Chain I, Crystal
Structure Of Spinach Major Light-harvesting Complex At
2.72 Angstrom Resolution gi|47168897|pdb|1RWT|J Chain J,
Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
Length = 232
Score = 334 bits (856), Expect = 9e-90
Identities = 158/164 (96%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 19 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 78
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAV
Sbjct: 79 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAV 138
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 139 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 182
>gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
Length = 267
Score = 334 bits (856), Expect = 9e-90
Identities = 156/164 (95%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 54 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVILMGAV
Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAV 173
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 174 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217
>ref|XP_006467511.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Citrus sinensis]
Length = 399
Score = 333 bits (855), Expect = 1e-89
Identities = 155/164 (94%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV
Sbjct: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
Score = 171 bits (432), Expect = 1e-40
Identities = 94/163 (57%), Positives = 109/163 (66%), Gaps = 20/163 (12%)
Frame = +1
Query: 64 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVQFGEA---- 231
+PG +D GL+ DPE FA+ + E+ + R AM G +++ G A
Sbjct: 188 YPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 246
Query: 232 ------VWFKA----------GSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVE 363
W A G+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVE
Sbjct: 247 DPVNNNAWAYATNFVPGKKFAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVE 306
Query: 364 GYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
GYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 307 GYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 349
>ref|XP_006467509.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Citrus sinensis]
Length = 264
Score = 333 bits (855), Expect = 1e-89
Identities = 155/164 (94%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 51 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV
Sbjct: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 170
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 171 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
>ref|XP_006368026.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Solanum tuberosum]
Length = 265
Score = 333 bits (855), Expect = 1e-89
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 52 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAV
Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 171
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 172 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 215
>ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Solanum tuberosum]
Length = 265
Score = 333 bits (855), Expect = 1e-89
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 52 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAV
Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 171
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 172 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 215
>ref|XP_006365560.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Solanum tuberosum]
Length = 265
Score = 333 bits (855), Expect = 1e-89
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +1
Query: 1 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 180
PDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG
Sbjct: 52 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111
Query: 181 CVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 360
CVFPELL+RNGV+FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAV
Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 171
Query: 361 EGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 492
EGYR+AGGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIK
Sbjct: 172 EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 215