BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00015933
         (246 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523906.1| RNA-binding region-containing protein, putat...   122   7e-26
ref|XP_007220834.1| hypothetical protein PRUPE_ppa026384mg, part...   119   3e-25
ref|XP_002315274.1| RNA recognition motif-containing family prot...   117   2e-24
ref|XP_006485938.1| PREDICTED: RNA-binding protein 38-like isofo...   115   6e-24
ref|XP_006436202.1| hypothetical protein CICLE_v10032535mg [Citr...   115   6e-24
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...   114   1e-23
emb|CBI31519.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002312040.1| RNA recognition motif-containing family prot...   114   2e-23
gb|EXC19488.1| RNA-binding protein 38 [Morus notabilis]               110   2e-22
ref|XP_007009717.1| RNA-binding family protein isoform 3 [Theobr...   110   2e-22
ref|XP_007009716.1| RNA-binding family protein isoform 2 [Theobr...   110   2e-22
ref|XP_007009715.1| RNA-binding family protein isoform 1 [Theobr...   110   2e-22
gb|EYU39793.1| hypothetical protein MIMGU_mgv1a011734mg [Mimulus...    98   1e-18
ref|XP_004307422.1| PREDICTED: uncharacterized protein LOC101308...    98   1e-18
ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isofo...    94   3e-17
ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isofo...    94   3e-17
ref|XP_004237522.1| PREDICTED: uncharacterized protein LOC101251...    93   4e-17
ref|XP_004237521.1| PREDICTED: uncharacterized protein LOC101251...    93   4e-17
ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231...    90   4e-16
ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202...    90   4e-16

>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  122 bits (305), Expect = 7e-26
 Identities = 55/79 (69%), Positives = 68/79 (86%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GGSYMNGHFS VYPGQ +MG NT+MP+YP+Y   H HQSQTMGLPAH++P TT A
Sbjct: 175 KLSYTGGSYMNGHFSQVYPGQAIMGANTLMPMYPLY---HFHQSQTMGLPAHIFPQTT-A 230

Query: 186 GHVTTVPTIISKPPAMAPN 242
           G +TTVPTI+SKPP++AP+
Sbjct: 231 GPITTVPTIMSKPPSIAPS 249


>ref|XP_007220834.1| hypothetical protein PRUPE_ppa026384mg, partial [Prunus persica]
           gi|462417296|gb|EMJ22033.1| hypothetical protein
           PRUPE_ppa026384mg, partial [Prunus persica]
          Length = 253

 Score =  119 bits (299), Expect = 3e-25
 Identities = 54/80 (67%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFS-HVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTA 182
           K+GY+GG+YMNGH+S  VYPGQ M+G NT+MP+YP+Y  H+HHQS TMGLPAH++PPTT 
Sbjct: 176 KLGYTGGAYMNGHYSPQVYPGQPMVGPNTLMPMYPLY--HYHHQSHTMGLPAHIFPPTT- 232

Query: 183 AGHVTTVPTIISKPPAMAPN 242
           +GHV  VPTI+SKP ++APN
Sbjct: 233 SGHVAAVPTIMSKPASIAPN 252


>ref|XP_002315274.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|118481097|gb|ABK92502.1| unknown
           [Populus trichocarpa] gi|222864314|gb|EEF01445.1| RNA
           recognition motif-containing family protein [Populus
           trichocarpa]
          Length = 253

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/79 (69%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLP-AHVYPPTTA 182
           K+ Y+GGSYMNGHFS VYPGQ M+G NT+MP+YP   F+H HQSQ MGLP AH++PPTT 
Sbjct: 170 KLNYTGGSYMNGHFSQVYPGQAMVGANTLMPMYP---FYHFHQSQAMGLPAAHIFPPTT- 225

Query: 183 AGHVTTVPTIISKPPAMAP 239
           AG +TTVPTI+SKPP++AP
Sbjct: 226 AGPMTTVPTIMSKPPSIAP 244


>ref|XP_006485938.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Citrus sinensis]
          Length = 254

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGG-NTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTA 182
           K+ Y+GGSY+NGHF  +YPGQ ++G  NT+MP+YP+Y   H HQSQTMGLPAH++PPTT 
Sbjct: 170 KLSYTGGSYVNGHFPQMYPGQPIVGATNTLMPIYPLY---HFHQSQTMGLPAHIFPPTT- 225

Query: 183 AGHVTTVPTIISKPPAMAPN 242
           AGH+TTVP IISKP ++APN
Sbjct: 226 AGHMTTVPAIISKPASIAPN 245


>ref|XP_006436202.1| hypothetical protein CICLE_v10032535mg [Citrus clementina]
           gi|568865147|ref|XP_006485939.1| PREDICTED: RNA-binding
           protein 38-like isoform X2 [Citrus sinensis]
           gi|557538398|gb|ESR49442.1| hypothetical protein
           CICLE_v10032535mg [Citrus clementina]
          Length = 252

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGG-NTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTA 182
           K+ Y+GGSY+NGHF  +YPGQ ++G  NT+MP+YP+Y   H HQSQTMGLPAH++PPTT 
Sbjct: 170 KLSYTGGSYVNGHFPQMYPGQPIVGATNTLMPIYPLY---HFHQSQTMGLPAHIFPPTT- 225

Query: 183 AGHVTTVPTIISKPPAMAPN 242
           AGH+TTVP IISKP ++APN
Sbjct: 226 AGHMTTVPAIISKPASIAPN 245


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GGSYMNGHFS VYPGQ M+G N +MP+YP   F+H HQSQTMG PAH++PPTT  
Sbjct: 166 KLSYTGGSYMNGHFSQVYPGQAMVGANALMPMYP---FYHFHQSQTMGHPAHMFPPTT-V 221

Query: 186 GHVTTVPTIISKPPAMAPN 242
           G + TVP IISKP +MAPN
Sbjct: 222 GPMPTVPAIISKPTSMAPN 240


>emb|CBI31519.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GGSYMNGHFS VYPGQ M+G N +MP+YP   F+H HQSQTMG PAH++PPTT  
Sbjct: 135 KLSYTGGSYMNGHFSQVYPGQAMVGANALMPMYP---FYHFHQSQTMGHPAHMFPPTT-V 190

Query: 186 GHVTTVPTIISKPPAMAPN 242
           G + TVP IISKP +MAPN
Sbjct: 191 GPMPTVPAIISKPTSMAPN 209


>ref|XP_002312040.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222851860|gb|EEE89407.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 251

 Score =  114 bits (284), Expect = 2e-23
 Identities = 53/79 (67%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLP-AHVYPPTTA 182
           K+ Y+GGSYMNGHFS VYPGQ M+G NT+MP+YP+Y   H HQSQ +GLP AH++PP T 
Sbjct: 168 KLSYTGGSYMNGHFSQVYPGQAMVGANTLMPMYPLY---HFHQSQAVGLPAAHIFPPNT- 223

Query: 183 AGHVTTVPTIISKPPAMAP 239
           AG +TTVPTI+SKPP++AP
Sbjct: 224 AGPMTTVPTIMSKPPSIAP 242


>gb|EXC19488.1| RNA-binding protein 38 [Morus notabilis]
          Length = 277

 Score =  110 bits (276), Expect = 2e-22
 Identities = 50/79 (63%), Positives = 65/79 (82%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GG+YM+GHFS VYPGQ +MG NT+MP+YP+Y   H+HQS TMGLPAH++ PTT A
Sbjct: 169 KLSYTGGTYMSGHFSQVYPGQPIMGANTLMPMYPMY---HYHQSHTMGLPAHMF-PTTTA 224

Query: 186 GHVTTVPTIISKPPAMAPN 242
           G ++T P IISKP ++APN
Sbjct: 225 GPISTGPAIISKPASIAPN 243


>ref|XP_007009717.1| RNA-binding family protein isoform 3 [Theobroma cacao]
           gi|508726630|gb|EOY18527.1| RNA-binding family protein
           isoform 3 [Theobroma cacao]
          Length = 254

 Score =  110 bits (276), Expect = 2e-22
 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 3/83 (3%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GG+YMNG FS VYPGQ ++G NT+MP+YP   F+H+HQSQTMGLPAHV+PPTT A
Sbjct: 165 KLSYTGGTYMNGPFSQVYPGQALVGANTLMPMYP---FYHYHQSQTMGLPAHVFPPTT-A 220

Query: 186 GHVTTVP--TIISKP-PAMAPNA 245
           G +TTVP   I+SKP  AMAPN+
Sbjct: 221 GPITTVPAAAIMSKPAAAMAPNS 243


>ref|XP_007009716.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508726629|gb|EOY18526.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 249

 Score =  110 bits (276), Expect = 2e-22
 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 3/83 (3%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GG+YMNG FS VYPGQ ++G NT+MP+YP   F+H+HQSQTMGLPAHV+PPTT A
Sbjct: 165 KLSYTGGTYMNGPFSQVYPGQALVGANTLMPMYP---FYHYHQSQTMGLPAHVFPPTT-A 220

Query: 186 GHVTTVP--TIISKP-PAMAPNA 245
           G +TTVP   I+SKP  AMAPN+
Sbjct: 221 GPITTVPAAAIMSKPAAAMAPNS 243


>ref|XP_007009715.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508726628|gb|EOY18525.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 256

 Score =  110 bits (276), Expect = 2e-22
 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 3/83 (3%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GG+YMNG FS VYPGQ ++G NT+MP+YP   F+H+HQSQTMGLPAHV+PPTT A
Sbjct: 165 KLSYTGGTYMNGPFSQVYPGQALVGANTLMPMYP---FYHYHQSQTMGLPAHVFPPTT-A 220

Query: 186 GHVTTVP--TIISKP-PAMAPNA 245
           G +TTVP   I+SKP  AMAPN+
Sbjct: 221 GPITTVPAAAIMSKPAAAMAPNS 243


>gb|EYU39793.1| hypothetical protein MIMGU_mgv1a011734mg [Mimulus guttatus]
          Length = 272

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNT-IMPVYPVYQFHHHHQSQTMGLPAHVYPPTTA 182
           K+GY+GGSYMNGH+S +Y GQ M+G NT I P+YP+Y     HQSQTMGLPAHVY PT A
Sbjct: 192 KLGYNGGSYMNGHYSQLYQGQAMVGANTLIQPMYPLY----FHQSQTMGLPAHVYSPTPA 247

Query: 183 AGHVTTVPTIISKPPAMAP 239
                 +PT+ISKP ++AP
Sbjct: 248 G----PIPTLISKPTSIAP 262


>ref|XP_004307422.1| PREDICTED: uncharacterized protein LOC101308509 [Fragaria vesca
           subsp. vesca]
          Length = 257

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
 Frame = +3

Query: 6   KMGYS-GGSYMNGHFS-HVYPG-QGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPT 176
           K+GYS GG YMNGH+S  VY   Q M+G NT+MP+YP+Y  H+HHQS TMGLPA  +PPT
Sbjct: 170 KLGYSTGGGYMNGHYSPQVYHSHQPMVGPNTLMPMYPLY--HYHHQSHTMGLPAQFFPPT 227

Query: 177 TAAGHVTTVPTIISKPPAMAPN 242
           TA    T VP I+SKP ++APN
Sbjct: 228 TAGHVATAVPAIMSKPASIAPN 249


>ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Solanum
           tuberosum]
          Length = 253

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 45/80 (56%), Positives = 55/80 (68%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GG YMNGHFS VYP Q MM      P+YP Y  H HHQSQTMGLPAH+Y P T A
Sbjct: 177 KVSYNGGGYMNGHFSQVYPSQAMM------PMYPYY--HFHHQSQTMGLPAHIYSP-TPA 227

Query: 186 GHVTTVPTIISKPPAMAPNA 245
           G +  +P ++SKP ++ P A
Sbjct: 228 GPIPALPALMSKPTSIPPTA 247


>ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Solanum
           tuberosum]
          Length = 262

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 45/80 (56%), Positives = 55/80 (68%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPTTAA 185
           K+ Y+GG YMNGHFS VYP Q MM      P+YP Y  H HHQSQTMGLPAH+Y P T A
Sbjct: 177 KVSYNGGGYMNGHFSQVYPSQAMM------PMYPYY--HFHHQSQTMGLPAHIYSP-TPA 227

Query: 186 GHVTTVPTIISKPPAMAPNA 245
           G +  +P ++SKP ++ P A
Sbjct: 228 GPIPALPALMSKPTSIPPTA 247


>ref|XP_004237522.1| PREDICTED: uncharacterized protein LOC101251083 isoform 2 [Solanum
           lycopersicum]
          Length = 241

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/81 (59%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVY-PVYQFHHHHQSQTMGLPAHVYPPTTA 182
           K+ Y+GG Y+NGHFS VYPGQ MM      PVY P YQFHH  QSQTMGLPAH+Y PT A
Sbjct: 167 KVSYNGGGYVNGHFSQVYPGQAMM------PVYHPYYQFHH--QSQTMGLPAHIYSPTPA 218

Query: 183 AGHVTTVPTIISKPPAMAPNA 245
           A     +PT++SKP ++ P A
Sbjct: 219 A----PIPTLMSKPTSIPPTA 235


>ref|XP_004237521.1| PREDICTED: uncharacterized protein LOC101251083 isoform 1 [Solanum
           lycopersicum]
          Length = 250

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/81 (59%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = +3

Query: 6   KMGYSGGSYMNGHFSHVYPGQGMMGGNTIMPVY-PVYQFHHHHQSQTMGLPAHVYPPTTA 182
           K+ Y+GG Y+NGHFS VYPGQ MM      PVY P YQFHH  QSQTMGLPAH+Y PT A
Sbjct: 167 KVSYNGGGYVNGHFSQVYPGQAMM------PVYHPYYQFHH--QSQTMGLPAHIYSPTPA 218

Query: 183 AGHVTTVPTIISKPPAMAPNA 245
           A     +PT++SKP ++ P A
Sbjct: 219 A----PIPTLMSKPTSIPPTA 235


>ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231499 [Cucumis sativus]
          Length = 266

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
 Frame = +3

Query: 30  YMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPT-TAAGHVTTVP 206
           YMNGH++ +YPGQ M+G NT+MP+YP+Y   H+HQS  MG+PAH++PP+ T AG    VP
Sbjct: 188 YMNGHYTQMYPGQAMVGANTLMPMYPLY---HYHQSHAMGMPAHIFPPSPTTAGPFAAVP 244

Query: 207 --TIISKPPAMAPN 242
             +I+SKP  + PN
Sbjct: 245 PTSIMSKPTTVGPN 258


>ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202850 [Cucumis sativus]
          Length = 266

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
 Frame = +3

Query: 30  YMNGHFSHVYPGQGMMGGNTIMPVYPVYQFHHHHQSQTMGLPAHVYPPT-TAAGHVTTVP 206
           YMNGH++ +YPGQ M+G NT+MP+YP+Y   H+HQS  MG+PAH++PP+ T AG    VP
Sbjct: 188 YMNGHYTQMYPGQAMVGANTLMPMYPLY---HYHQSHAMGMPAHIFPPSPTTAGPFAAVP 244

Query: 207 --TIISKPPAMAPN 242
             +I+SKP  + PN
Sbjct: 245 PTSIMSKPTTVGPN 258