BLASTX nr result
ID: Cocculus23_contig00015857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00015857
(316 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838158.1| hypothetical protein AMTR_s00106p00105070 [A... 48 6e-09
ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat... 44 2e-08
ref|XP_007045328.1| Pentatricopeptide repeat-containing protein,... 39 8e-07
ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat... 45 8e-07
gb|EXC44867.1| hypothetical protein L484_000446 [Morus notabilis] 40 4e-06
gb|EXC19798.1| hypothetical protein L484_000854 [Morus notabilis] 40 4e-06
ref|XP_006395805.1| hypothetical protein EUTSA_v10003688mg [Eutr... 39 5e-06
ref|NP_178323.3| putative pentatricopeptide repeat-containing pr... 40 6e-06
>ref|XP_006838158.1| hypothetical protein AMTR_s00106p00105070 [Amborella trichopoda]
gi|548840616|gb|ERN00727.1| hypothetical protein
AMTR_s00106p00105070 [Amborella trichopoda]
Length = 757
Score = 47.8 bits (112), Expect(2) = 6e-09
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHT 311
PI S LVKLR+E LALK+FNW Q GFQHT
Sbjct: 98 PIHLSHFLVKLRDEAPLALKLFNWFSNQTGFQHT 131
Score = 38.1 bits (87), Expect(2) = 6e-09
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 91 TKAKSENLGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQLRLPEF 231
T + NL ++KEL+ I+ E WDD R+ L SVLA + L F
Sbjct: 58 TNSNPLNLSTDIDKELLIKIIEEEHWDDPRIKVLLGSVLAPIHLSHF 104
>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +1
Query: 46 LFLSNYLCLIRCNFATKAKSENLGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQL 216
++LS ++CLIR F + N D +K+ + IVRE WDD R+V LF S LA +
Sbjct: 44 IWLSCFICLIRFPFVSNRHFHNF-DCFDKDSVREIVREQRWDDFRIVSLFDSALAPI 99
Score = 39.7 bits (91), Expect(2) = 2e-08
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHTT 314
PI ASRVLV+L ++ LAL+ F W + GFQHT+
Sbjct: 98 PIWASRVLVELCQDARLALRFFEWAKGRIGFQHTS 132
>ref|XP_007045328.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|590697040|ref|XP_007045329.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
gi|590697044|ref|XP_007045330.1| Pentatricopeptide
repeat-containing protein, putative isoform 1 [Theobroma
cacao] gi|590697048|ref|XP_007045331.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709263|gb|EOY01160.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709264|gb|EOY01161.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709265|gb|EOY01162.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709266|gb|EOY01163.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 779
Score = 39.3 bits (90), Expect(2) = 8e-07
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 46 LFLSNYLCLIRCNFATKAKSEN--LGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQL 216
+ L+++ +++ F TK S D N+E IC I+++ W+D ++V LF S LA +
Sbjct: 63 ILLTSFFYMMKFPFGTKCNSNTHIFLDDFNRESICKIIQQDQWNDPKIVTLFDSSLAPI 121
Score = 39.3 bits (90), Expect(2) = 8e-07
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHTT 314
PI S++LV L++E LALK F W KGF HT+
Sbjct: 120 PIWVSKILVGLKQEPKLALKFFKWAKTHKGFGHTS 154
>ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 44.7 bits (104), Expect(2) = 8e-07
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHTT 314
PI S++L+ LRE+ LALK F W G Q GF+HTT
Sbjct: 129 PIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTT 163
Score = 33.9 bits (76), Expect(2) = 8e-07
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +1
Query: 49 FLSNYLCLIRCNFATKAKSENLGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQL 216
+ +++LC+ R F + + + N L+ + I+++ W+D ++V LF S LA +
Sbjct: 75 WFTSFLCIFRLPFVSYSNANNSFQYLDIGSLRKIIQQDLWNDPKIVVLFDSALAPI 130
>gb|EXC44867.1| hypothetical protein L484_000446 [Morus notabilis]
Length = 789
Score = 40.0 bits (92), Expect(2) = 4e-06
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHT 311
PI SR LV+L+E LALK+F WV + GF+HT
Sbjct: 132 PILVSRFLVELKEYPFLALKLFKWVRNRTGFRHT 165
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 43 LLFLSNYLCLIRCNFATKAKSENLGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQLRL 222
L + +++L L+R F +K+ + + L++E + IV + W D ++V LF S +A + +
Sbjct: 76 LAWFTSFLFLVRFPFYSKSSASFSLEVLDREQLRRIVEQDQWHDPKIVNLFDSAIAPILV 135
Query: 223 PEF 231
F
Sbjct: 136 SRF 138
>gb|EXC19798.1| hypothetical protein L484_000854 [Morus notabilis]
Length = 789
Score = 40.0 bits (92), Expect(2) = 4e-06
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHT 311
PI SR LV+L+E LALK+F WV + GF+HT
Sbjct: 132 PILVSRFLVELKEYPFLALKLFKWVRNRTGFRHT 165
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 43 LLFLSNYLCLIRCNFATKAKSENLGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQLRL 222
L + +++L L+R F +K+ + + L++E + IV + W D ++V LF S +A + +
Sbjct: 76 LAWFTSFLFLVRFPFYSKSSASFSLEVLDREQLRRIVEQDQWHDPKIVNLFDSAIAPILV 135
Query: 223 PEF 231
F
Sbjct: 136 SRF 138
>ref|XP_006395805.1| hypothetical protein EUTSA_v10003688mg [Eutrema salsugineum]
gi|557092444|gb|ESQ33091.1| hypothetical protein
EUTSA_v10003688mg [Eutrema salsugineum]
Length = 762
Score = 39.3 bits (90), Expect(2) = 5e-06
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 34 SIVLLFLSNYLCLIRCNFATKAKSENLGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQ 213
S ++ +++LC+IR F +K+ + + I +V+ WDD ++ LF S LA
Sbjct: 47 SCPFVWFTSFLCIIRYPFVSKSGPSSYSEDFEINWIRNVVQNDLWDDPQIEKLFDSTLAP 106
Query: 214 LRLP 225
+ +P
Sbjct: 107 IWVP 110
Score = 36.6 bits (83), Expect(2) = 5e-06
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHT 311
PI R+LV+L+E+ LA K F W + GF+HT
Sbjct: 106 PIWVPRILVELKEDPKLAFKFFKWSMNRNGFKHT 139
>ref|NP_178323.3| putative pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|218546751|sp|P0C894.1|PP143_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At2g02150 gi|330250459|gb|AEC05553.1| putative
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 761
Score = 40.4 bits (93), Expect(2) = 6e-06
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 34 SIVLLFLSNYLCLIRCNFATKAKSENLGDGLNKELICGIVREGCWDDSRLVGLFSSVLAQ 213
S ++ +++LC+IR F TK+ + + +++ I +V WDD L LF LA
Sbjct: 49 SCPFVWFTSFLCIIRYPFVTKSGTSTYSEDFDRDWIRKVVHNDLWDDPGLEKLFDLTLAP 108
Query: 214 LRLP 225
+ +P
Sbjct: 109 IWVP 112
Score = 35.0 bits (79), Expect(2) = 6e-06
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 210 PIKASRVLVKLREELGLALKVFNWVGKQKGFQHT 311
PI RVLV+L+E+ LA K F W + GF+H+
Sbjct: 108 PIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHS 141