BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00015754
         (273 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893403.1| pentatricopeptide repeat-containing protein ...   108   6e-22
ref|XP_007045890.1| Tetratricopeptide repeat-like superfamily pr...   108   8e-22
ref|XP_007045889.1| Tetratricopeptide repeat (TPR)-like superfam...   108   8e-22
ref|XP_006415925.1| hypothetical protein EUTSA_v10007071mg [Eutr...   108   1e-21
ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi...   108   1e-21
ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_006437942.1| hypothetical protein CICLE_v10031249mg [Citr...   107   2e-21
gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis]     106   3e-21
ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Caps...   105   7e-21
ref|NP_564247.1| pentatricopeptide repeat-containing protein [Ar...   103   2e-20
gb|AAM61409.1| unknown [Arabidopsis thaliana]                         103   2e-20
ref|XP_006348701.1| PREDICTED: pentatricopeptide repeat-containi...   102   6e-20
ref|XP_004239056.1| PREDICTED: pentatricopeptide repeat-containi...   101   9e-20
ref|XP_002512090.1| pentatricopeptide repeat-containing protein,...   100   4e-19
tpg|DAA63474.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea m...    96   7e-18
tpg|DAA63472.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea m...    96   7e-18
tpg|DAA41331.1| TPA: hypothetical protein ZEAMMB73_952868 [Zea m...    96   7e-18
gb|EYU28858.1| hypothetical protein MIMGU_mgv1a020475mg [Mimulus...    95   1e-17
ref|XP_004958215.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_002460970.1| hypothetical protein SORBIDRAFT_02g038410 [S...    94   2e-17

>ref|XP_002893403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339245|gb|EFH69662.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 630

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/66 (72%), Positives = 62/66 (93%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRD K+AL+V+D M+KAGF+P++ETL+K+R+RC+RE+DYE+DD+VE LAKKF I
Sbjct: 547 VDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDYENDDQVEALAKKFQI 606

Query: 92  RMGTEN 75
           RMGTEN
Sbjct: 607 RMGTEN 612


>ref|XP_007045890.1| Tetratricopeptide repeat-like superfamily protein isoform 2
           [Theobroma cacao] gi|508709825|gb|EOY01722.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 444

 Score =  108 bits (270), Expect = 8e-22
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRDQK+ALS ID MV A F P+KET++KVR+RCIRE+DYESDDRVE LAKKFNI
Sbjct: 361 VDAHLINRDQKSALSAIDEMVTAEFVPSKETVKKVRRRCIREMDYESDDRVESLAKKFNI 420

Query: 92  RMGTEN 75
           +MG+EN
Sbjct: 421 QMGSEN 426


>ref|XP_007045889.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508709824|gb|EOY01721.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 616

 Score =  108 bits (270), Expect = 8e-22
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRDQK+ALS ID MV A F P+KET++KVR+RCIRE+DYESDDRVE LAKKFNI
Sbjct: 533 VDAHLINRDQKSALSAIDEMVTAEFVPSKETVKKVRRRCIREMDYESDDRVESLAKKFNI 592

Query: 92  RMGTEN 75
           +MG+EN
Sbjct: 593 QMGSEN 598


>ref|XP_006415925.1| hypothetical protein EUTSA_v10007071mg [Eutrema salsugineum]
           gi|557093696|gb|ESQ34278.1| hypothetical protein
           EUTSA_v10007071mg [Eutrema salsugineum]
          Length = 625

 Score =  108 bits (269), Expect = 1e-21
 Identities = 49/66 (74%), Positives = 60/66 (90%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRD K+AL+VID M+ AGF+PTKETL+KVR+RC+RE+DYE++D VE LAKKF I
Sbjct: 545 VDAHLINRDPKSALTVIDDMINAGFEPTKETLKKVRRRCVREIDYENNDHVESLAKKFEI 604

Query: 92  RMGTEN 75
           RMG+EN
Sbjct: 605 RMGSEN 610


>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Vitis vinifera]
           gi|297738080|emb|CBI27281.3| unnamed protein product
           [Vitis vinifera]
          Length = 616

 Score =  108 bits (269), Expect = 1e-21
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRDQKAALSVI+ M+ AGF P+KE L+KVR+RCIRE+DYES+D+VE LA+KF I
Sbjct: 536 VDAHLINRDQKAALSVIEEMINAGFAPSKEILKKVRRRCIREMDYESNDQVESLARKFKI 595

Query: 92  RMGTEN 75
           RMGTEN
Sbjct: 596 RMGTEN 601


>ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 613

 Score =  107 bits (266), Expect = 2e-21
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHL NRDQKAALSVID MV AGF P+KETL+KVR+RC+RE+D ES+DRVE LAKKF+I
Sbjct: 533 VDAHLTNRDQKAALSVIDEMVNAGFAPSKETLKKVRRRCVREMDEESNDRVEALAKKFDI 592

Query: 92  RMGTENYEPI 63
           RM TEN + I
Sbjct: 593 RMNTENRKNI 602


>ref|XP_006437942.1| hypothetical protein CICLE_v10031249mg [Citrus clementina]
           gi|567890849|ref|XP_006437945.1| hypothetical protein
           CICLE_v10031249mg [Citrus clementina]
           gi|557540138|gb|ESR51182.1| hypothetical protein
           CICLE_v10031249mg [Citrus clementina]
           gi|557540141|gb|ESR51185.1| hypothetical protein
           CICLE_v10031249mg [Citrus clementina]
          Length = 613

 Score =  107 bits (266), Expect = 2e-21
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHL NRDQKAALSVID MV AGF P+KETL+KVR+RC+RE+D ES+DRVE LAKKF+I
Sbjct: 533 VDAHLTNRDQKAALSVIDEMVNAGFAPSKETLKKVRRRCVREMDEESNDRVEALAKKFDI 592

Query: 92  RMGTENYEPI 63
           RM TEN + I
Sbjct: 593 RMNTENRKNI 602


>gb|EXB44833.1| hypothetical protein L484_026413 [Morus notabilis]
          Length = 665

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/66 (74%), Positives = 59/66 (89%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VD HLINRDQKAALS++D MV AGF+P+KETL+KVR+RCIRE+DYES+DRV+  A K+ I
Sbjct: 584 VDTHLINRDQKAALSMLDDMVNAGFEPSKETLKKVRRRCIREMDYESNDRVQSFAVKYKI 643

Query: 92  RMGTEN 75
           RMGTEN
Sbjct: 644 RMGTEN 649


>ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Capsella rubella]
           gi|482571880|gb|EOA36067.1| hypothetical protein
           CARUB_v10008572mg [Capsella rubella]
          Length = 630

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/66 (71%), Positives = 61/66 (92%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRD K+AL+V+D M+KAGF+P++ETL+K+R+RC+RE+D E+DD+VE LAKKF I
Sbjct: 547 VDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDNENDDQVEALAKKFQI 606

Query: 92  RMGTEN 75
           RMGTEN
Sbjct: 607 RMGTEN 612


>ref|NP_564247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75173405|sp|Q9FZD1.1|PPR58_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g26460, mitochondrial; Flags: Precursor
           gi|9797754|gb|AAF98572.1|AC013427_15 Contains similarity
           to a hypothetical protein F21B7.16 gi|7485908 from
           Arabidopsis thaliana BAC F21B7 gb|AC002560 and contains
           multiple PPR PF|01535 repeats and a domain of unknown
           function PF|00668. ESTs gb|T45755, gb|AI993167,
           gb|AV554476, gb|T46823, gb|T41981, gb|AV546597,
           gb|AI099868 come from this gene [Arabidopsis thaliana]
           gi|19698979|gb|AAL91225.1| unknown protein [Arabidopsis
           thaliana] gi|22136300|gb|AAM91228.1| unknown protein
           [Arabidopsis thaliana] gi|332192573|gb|AEE30694.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  103 bits (257), Expect = 2e-20
 Identities = 46/66 (69%), Positives = 61/66 (92%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRD K+AL+V+D M+KAGF+P++ETL+K+R+RC+RE+D E+DD+VE LAKKF I
Sbjct: 547 VDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQI 606

Query: 92  RMGTEN 75
           RMG+EN
Sbjct: 607 RMGSEN 612


>gb|AAM61409.1| unknown [Arabidopsis thaliana]
          Length = 630

 Score =  103 bits (257), Expect = 2e-20
 Identities = 46/66 (69%), Positives = 61/66 (92%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRD K+AL+V+D M+KAGF+P++ETL+K+R+RC+RE+D E+DD+VE LAKKF I
Sbjct: 547 VDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQI 606

Query: 92  RMGTEN 75
           RMG+EN
Sbjct: 607 RMGSEN 612


>ref|XP_006348701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Solanum tuberosum]
          Length = 617

 Score =  102 bits (254), Expect = 6e-20
 Identities = 47/66 (71%), Positives = 58/66 (87%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLI R+ KAALSV+D MV A ++P+K+ L+K+R+RC RE+DYESDDRVE+L KKFNI
Sbjct: 536 VDAHLIKREPKAALSVVDEMVHAQYKPSKDMLKKIRRRCTREMDYESDDRVEELTKKFNI 595

Query: 92  RMGTEN 75
           RMGTEN
Sbjct: 596 RMGTEN 601


>ref|XP_004239056.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Solanum lycopersicum]
          Length = 617

 Score =  101 bits (252), Expect = 9e-20
 Identities = 47/66 (71%), Positives = 57/66 (86%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLI R+ KAALSV+D MV A ++P+KE L+K+R+RC RE+DYESDDRVE+L KKFNI
Sbjct: 536 VDAHLIKREPKAALSVVDEMVHAQYKPSKEMLKKIRRRCTREMDYESDDRVEELTKKFNI 595

Query: 92  RMGTEN 75
           RMG EN
Sbjct: 596 RMGAEN 601


>ref|XP_002512090.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549270|gb|EEF50759.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 47/66 (71%), Positives = 56/66 (84%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHLINRD K ALSVI+ M+ AGF P+KETL+KVR+RC+RE+DY+SDDRV  +AK   I
Sbjct: 538 VDAHLINRDVKTALSVIEEMMSAGFTPSKETLKKVRRRCVREMDYDSDDRVGSVAKNCKI 597

Query: 92  RMGTEN 75
           RMGTEN
Sbjct: 598 RMGTEN 603


>tpg|DAA63474.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea mays]
          Length = 179

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHL N+D KAAL++ID MV AGF P+K+TLRKVR+RC RE D++SD++V+ LAK+FN 
Sbjct: 100 VDAHLANKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNY 159

Query: 92  RMGTEN 75
           RMG EN
Sbjct: 160 RMGGEN 165


>tpg|DAA63472.1| TPA: hypothetical protein ZEAMMB73_429774 [Zea mays]
          Length = 618

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHL N+D KAAL++ID MV AGF P+K+TLRKVR+RC RE D++SD++V+ LAK+FN 
Sbjct: 539 VDAHLANKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNY 598

Query: 92  RMGTEN 75
           RMG EN
Sbjct: 599 RMGGEN 604


>tpg|DAA41331.1| TPA: hypothetical protein ZEAMMB73_952868 [Zea mays]
           gi|414590761|tpg|DAA41332.1| TPA: hypothetical protein
           ZEAMMB73_952868 [Zea mays]
          Length = 407

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHL N+D KAAL++ID MV AGF P+K+TLRKVR+RC RE D++SD++V+ LAK+FN 
Sbjct: 328 VDAHLANKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNY 387

Query: 92  RMGTEN 75
           RMG EN
Sbjct: 388 RMGGEN 393


>gb|EYU28858.1| hypothetical protein MIMGU_mgv1a020475mg [Mimulus guttatus]
          Length = 606

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 43/65 (66%), Positives = 56/65 (86%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           +DAHL  RD KAAL+VID M+ AG +P+KE L+KVR+RC+RE+DYESD++VE LA++F I
Sbjct: 526 IDAHLTTRDPKAALAVIDHMMGAGCEPSKEMLKKVRRRCVREMDYESDEKVESLARQFKI 585

Query: 92  RMGTE 78
           RMGTE
Sbjct: 586 RMGTE 590


>ref|XP_004958215.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Setaria italica]
          Length = 610

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 43/66 (65%), Positives = 56/66 (84%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHL N+D KAAL++ID MV AGF P+K+TL+KVR+RC RE D++SD++V+ LAK+FN 
Sbjct: 531 VDAHLANKDPKAALAIIDKMVDAGFTPSKDTLKKVRRRCSRESDFDSDEKVQSLAKQFNY 590

Query: 92  RMGTEN 75
           RMG EN
Sbjct: 591 RMGGEN 596


>ref|XP_002460970.1| hypothetical protein SORBIDRAFT_02g038410 [Sorghum bicolor]
           gi|241924347|gb|EER97491.1| hypothetical protein
           SORBIDRAFT_02g038410 [Sorghum bicolor]
          Length = 616

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 43/66 (65%), Positives = 56/66 (84%)
 Frame = -2

Query: 272 VDAHLINRDQKAALSVIDGMVKAGFQPTKETLRKVRKRCIRELDYESDDRVEDLAKKFNI 93
           VDAHL N+D KAAL++ID MV AGF P+K+TLRKVR+RC RE D++SD++V+ LAK+FN 
Sbjct: 537 VDAHLANKDPKAALAIIDEMVDAGFTPSKDTLRKVRRRCSRESDFDSDEKVQSLAKQFNY 596

Query: 92  RMGTEN 75
           R+G EN
Sbjct: 597 RLGGEN 602