BLASTX nr result
ID: Cocculus23_contig00014728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00014728
(1385 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18897.3| unnamed protein product [Vitis vinifera] 469 e-129
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|... 466 e-128
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi... 466 e-128
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 466 e-128
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 466 e-128
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 465 e-128
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 465 e-128
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi... 465 e-128
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr... 457 e-126
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi... 456 e-125
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi... 456 e-125
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi... 452 e-124
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 449 e-123
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 449 e-123
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 449 e-123
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas... 449 e-123
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas... 449 e-123
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu... 445 e-122
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi... 439 e-120
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi... 431 e-118
>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
Length = 419
Score = 469 bits (1206), Expect = e-129
Identities = 237/344 (68%), Positives = 276/344 (80%), Gaps = 6/344 (1%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LV+RLNSNLP QIRIFG+KRVTASFNAKKFCDRRRYVYLIPVF+LDP+ H DRESVLAS+
Sbjct: 65 LVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASV 124
Query: 182 GSENELVKCLECSERGRKVVGVMGRFNRESR------ITESDGKGEIESGFGAEXXXXXX 343
GSENELVKCLECSERGRKVVG+MG+ ES+ I +D + S E
Sbjct: 125 GSENELVKCLECSERGRKVVGIMGKRKGESKNIVQLGIPSNDEAAIVNSEVQEEIKATSN 184
Query: 344 XXXXXXLGVVEEENNVFPSVEANSNLDVNGNGEEKGASENGVKFHYGEEERERFNRILKH 523
++ N++ +++ + ++ GE K E G F YG++ERERFNRIL H
Sbjct: 185 NNN------IDANNSISETIKEEA-AKLSSEGENK--LEKGSGFCYGDKERERFNRILGH 235
Query: 524 FVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEGMDFVKCEVVGQSFMLHQIRKMI 703
+VGTHNFHNFTTR KAEDPSA+R+IVSFD N +V+VEG++FVKCEVVGQSFMLHQIRKMI
Sbjct: 236 YVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKMI 295
Query: 704 GLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYLDECLFTSYNQKWKESHEEISMK 883
GLAVA+MRN APE L++TAL +DVNI VPTAPEVGLYLDEC F+SYN+KW++SHEE+SMK
Sbjct: 296 GLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVSMK 355
Query: 884 AYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRRNYPDLC 1015
AYAEEAEEFKMK +YSHIAATEHKEGVVALWLHSLN RNYPDLC
Sbjct: 356 AYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLC 399
>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
Pseudouridine synthase [Theobroma cacao]
Length = 507
Score = 466 bits (1199), Expect = e-128
Identities = 245/339 (72%), Positives = 269/339 (79%), Gaps = 2/339 (0%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LV+RLN LP QIRIFGYKRVTASFN+KKFCDRRRYVYLIPVF+LDP+CHRDRESVLASL
Sbjct: 138 LVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRDRESVLASL 197
Query: 182 GSENELVKCLECSERGRKVVGVMGR--FNRESRITESDGKGEIESGFGAEXXXXXXXXXX 355
GS NELVKCLECSERGRKV GVMG+ F +S I SD + S G
Sbjct: 198 GSGNELVKCLECSERGRKVAGVMGKRSFEAKSTIVHSD----VSSNNGESGNVIKEH--- 250
Query: 356 XXLGVVEEENNVFPSVEANSNLDVNGNGEEKGASENGVKFHYGEEERERFNRILKHFVGT 535
+ E V S N +V+ EK E +F YGEEE+ FNRILKH+VG+
Sbjct: 251 ---NLTSELEEVTDSSVQNEFTEVDKVNVEKIPLEER-RFCYGEEEKGLFNRILKHYVGS 306
Query: 536 HNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEGMDFVKCEVVGQSFMLHQIRKMIGLAV 715
HNFHNFTTRTKAEDPSARRYIVSF AN VV+VEG+DFVKCEVVGQSFMLHQIRKMIG+AV
Sbjct: 307 HNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVGQSFMLHQIRKMIGMAV 366
Query: 716 AVMRNCAPELLIDTALRQDVNITVPTAPEVGLYLDECLFTSYNQKWKESHEEISMKAYAE 895
AVMRNCAPE LI+TALR+DV+I VPTAPEVGLYLDECLF SYNQKWK+SHEE+SMKAY E
Sbjct: 367 AVMRNCAPESLIETALRKDVSINVPTAPEVGLYLDECLFASYNQKWKDSHEELSMKAYEE 426
Query: 896 EAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRRNYPDL 1012
EAEEFKMK IYSHIA+TE +EGVVALWLHSLN RNYPDL
Sbjct: 427 EAEEFKMKFIYSHIASTEREEGVVALWLHSLNHRNYPDL 465
>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X2 [Glycine max]
Length = 518
Score = 466 bits (1198), Expect = e-128
Identities = 248/373 (66%), Positives = 284/373 (76%), Gaps = 28/373 (7%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LVDRLNSNLP+QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVF+LDP+CHRDRE+V+ASL
Sbjct: 100 LVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASL 159
Query: 182 GSENELVKCLECSERGRKVVGVMGR-----------------FNRESRITE----SDGKG 298
GS NELVKCLECSERGRKVVG++G NR+S +TE S KG
Sbjct: 160 GSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNRDSGVTEDVEVSLSKG 219
Query: 299 EI-----ESGFGAEXXXXXXXXXXXXLGVVEEENNVFPSVEANSNL--DVNGNGEEKGAS 457
+ ESG + + V EE + NS++ + NGE+K
Sbjct: 220 DDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGEDKPT- 278
Query: 458 ENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEG 637
NG +F YGE+ERERFN+ILK FVGTHNFHNFTTRTKAEDP+ARRYI+SF+AN + VEG
Sbjct: 279 -NGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEG 337
Query: 638 MDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYL 817
++FVKCEVVGQSFMLHQIRKMIGLAVA+MRNCAPE LID AL+QDVNI VPTAPEVGLYL
Sbjct: 338 VEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYL 397
Query: 818 DECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRR 997
DEC FTSYNQKWK+ HEE+SMKAY +EA+EFKMK IYSHIA+TE KEG VALWLHSLN R
Sbjct: 398 DECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHR 456
Query: 998 NYPDLCFMETDGV 1036
NYPDL + + +
Sbjct: 457 NYPDLRVINEEAI 469
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X1 [Glycine max]
Length = 548
Score = 466 bits (1198), Expect = e-128
Identities = 248/373 (66%), Positives = 284/373 (76%), Gaps = 28/373 (7%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LVDRLNSNLP+QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVF+LDP+CHRDRE+V+ASL
Sbjct: 130 LVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASL 189
Query: 182 GSENELVKCLECSERGRKVVGVMGR-----------------FNRESRITE----SDGKG 298
GS NELVKCLECSERGRKVVG++G NR+S +TE S KG
Sbjct: 190 GSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNRDSGVTEDVEVSLSKG 249
Query: 299 EI-----ESGFGAEXXXXXXXXXXXXLGVVEEENNVFPSVEANSNL--DVNGNGEEKGAS 457
+ ESG + + V EE + NS++ + NGE+K
Sbjct: 250 DDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGEDKPT- 308
Query: 458 ENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEG 637
NG +F YGE+ERERFN+ILK FVGTHNFHNFTTRTKAEDP+ARRYI+SF+AN + VEG
Sbjct: 309 -NGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEG 367
Query: 638 MDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYL 817
++FVKCEVVGQSFMLHQIRKMIGLAVA+MRNCAPE LID AL+QDVNI VPTAPEVGLYL
Sbjct: 368 VEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYL 427
Query: 818 DECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRR 997
DEC FTSYNQKWK+ HEE+SMKAY +EA+EFKMK IYSHIA+TE KEG VALWLHSLN R
Sbjct: 428 DECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHR 486
Query: 998 NYPDLCFMETDGV 1036
NYPDL + + +
Sbjct: 487 NYPDLRVINEEAI 499
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
Length = 519
Score = 466 bits (1198), Expect = e-128
Identities = 242/365 (66%), Positives = 276/365 (75%), Gaps = 29/365 (7%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNL QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVF+LDPNCHRDRESV ASLG
Sbjct: 136 VDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLG 195
Query: 185 SENELVKCLECSERGRKVVGVMGRFNRESR--ITESDGKGEIESGFGAEXXXXXXXXXXX 358
S+NELVKCLECSERGRKV G+MG+ N E + ITESD I +
Sbjct: 196 SDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESDISSNIVNAIEVSDVQANGVLEDS 255
Query: 359 XL------------------------GVVEEENNVFPSVEANSNLDVNG---NGEEKGAS 457
G+ + E++ + +S + V+ NG+EK +
Sbjct: 256 ATTSDSNKQTSVLVENTATELTVASEGIAKSESSEMSGLGNDSEIVVSKESVNGKEKPSG 315
Query: 458 ENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEG 637
F YGEEE+ RFNRILKH+VGTHNFHNFTTRTKAEDP+ARR+IVSFDA+ V VEG
Sbjct: 316 S----FKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVVEG 371
Query: 638 MDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYL 817
++FVKCEVVGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL++DVNI VPTAPEVGLYL
Sbjct: 372 IEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYL 431
Query: 818 DECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRR 997
DECLFTSYNQKWK++HEE+SMKAY E AE+FKMKQIYSHIA+TEHK+G VALWLHSLN R
Sbjct: 432 DECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHR 491
Query: 998 NYPDL 1012
NYPDL
Sbjct: 492 NYPDL 496
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 465 bits (1197), Expect = e-128
Identities = 242/365 (66%), Positives = 278/365 (76%), Gaps = 29/365 (7%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNL QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVF+LDPNCHRDRESV ASLG
Sbjct: 136 VDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLG 195
Query: 185 SENELVKCLECSERGRKVVGVMGRFNRESR--ITESD---------------GKGEIESG 313
S+NELVKCLECSERGRKV G++G+ N E + ITESD G +E
Sbjct: 196 SDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVNAIEVSDVQANGVLEDS 255
Query: 314 FGAEXXXXXXXXXXXXL---------GVVEEENNVFPSVEANSNLDVNG---NGEEKGAS 457
G + E++ + ++S + V+ NG+EK +
Sbjct: 256 ATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKESVNGKEKSSG 315
Query: 458 ENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEG 637
F YGEEE+ RFNRILKH+VGTHNFHNFTTRTKAEDP+ARR+IVSFDA+ +V VEG
Sbjct: 316 S----FKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIVVVEG 371
Query: 638 MDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYL 817
++FVKCEVVGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL++DVNI VPTAPEVGLYL
Sbjct: 372 IEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYL 431
Query: 818 DECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRR 997
DECLFTSYNQKWK++HEE+SMKAY E AE+FKMKQIYSHIA+TEHK+G VALWLHSLN R
Sbjct: 432 DECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHR 491
Query: 998 NYPDL 1012
NYPDL
Sbjct: 492 NYPDL 496
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
sativus]
Length = 519
Score = 465 bits (1197), Expect = e-128
Identities = 242/365 (66%), Positives = 278/365 (76%), Gaps = 29/365 (7%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNL QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVF+LDPNCHRDRESV ASLG
Sbjct: 136 VDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLG 195
Query: 185 SENELVKCLECSERGRKVVGVMGRFNRESR--ITESD---------------GKGEIESG 313
S+NELVKCLECSERGRKV G++G+ N E + ITESD G +E
Sbjct: 196 SDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVNAIEVSDVQANGVLEDS 255
Query: 314 FGAEXXXXXXXXXXXXL---------GVVEEENNVFPSVEANSNLDVNG---NGEEKGAS 457
G + E++ + ++S + V+ NG+EK +
Sbjct: 256 ATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKESVNGKEKSSG 315
Query: 458 ENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEG 637
F YGEEE+ RFNRILKH+VGTHNFHNFTTRTKAEDP+ARR+IVSFDA+ +V VEG
Sbjct: 316 S----FKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIVVVEG 371
Query: 638 MDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYL 817
++FVKCEVVGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL++DVNI VPTAPEVGLYL
Sbjct: 372 IEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYL 431
Query: 818 DECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRR 997
DECLFTSYNQKWK++HEE+SMKAY E AE+FKMKQIYSHIA+TEHK+G VALWLHSLN R
Sbjct: 432 DECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHR 491
Query: 998 NYPDL 1012
NYPDL
Sbjct: 492 NYPDL 496
>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera]
Length = 503
Score = 465 bits (1196), Expect = e-128
Identities = 241/367 (65%), Positives = 280/367 (76%), Gaps = 29/367 (7%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LV+RLNSNLP QIRIFG+KRVTASFNAKKFCDRRRYVYLIPVF+LDP+ H DRESVLAS+
Sbjct: 119 LVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASV 178
Query: 182 GSENELVKCLECSERGRKVVGVMGRFNRESRIT---ESDGKGEIESGFGA---------- 322
GSENELVKCLECSERGRKVVG+MG+ + ES+++ D +GE ++ GA
Sbjct: 179 GSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKNIVGAAILKSEAKEE 238
Query: 323 EXXXXXXXXXXXXLGVVEEENNVFPSVEAN----------------SNLDVNGNGEEKGA 454
+ +E F E + S+ + + GE K
Sbjct: 239 SMASSDNRHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNEPGVSHSEQSDKGENK-- 296
Query: 455 SENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVE 634
E G F YG++ERERFNRIL H+VGTHNFHNFTTR KAEDPSA+R+IVSFD N +V+VE
Sbjct: 297 LEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVE 356
Query: 635 GMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLY 814
G++FVKCEVVGQSFMLHQIRKMIGLAVA+MRN APE L++TAL +DVNI VPTAPEVGLY
Sbjct: 357 GIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLY 416
Query: 815 LDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNR 994
LDEC F+SYN+KW++SHEE+SMKAYAEEAEEFKMK +YSHIAATEHKEGVVALWLHSLN
Sbjct: 417 LDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNH 476
Query: 995 RNYPDLC 1015
RNYPDLC
Sbjct: 477 RNYPDLC 483
>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
gi|557537401|gb|ESR48519.1| hypothetical protein
CICLE_v10000838mg [Citrus clementina]
Length = 526
Score = 457 bits (1175), Expect = e-126
Identities = 242/384 (63%), Positives = 281/384 (73%), Gaps = 41/384 (10%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LV+RLNSNLP QIRIFGYKRVTASFNAKKFCD+RRYVYL+PVF+LD + HRDRESV+ASL
Sbjct: 140 LVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVMASL 199
Query: 182 GSENELVKCLECSERGRKVVGVMGRFNRESRITESDGKGEIESGFGAEXXXXXXXXXXXX 361
GS NELVKCLECSERGRKV+GVMG+ + + +D + S +
Sbjct: 200 GSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGDRHN 259
Query: 362 LGV--VEEENNVFPSV---EANS-----------------------NLDVNG-------- 433
+ VE + SV ANS +LD++
Sbjct: 260 TNLESVESNKTISESVMVENANSESVNETLVESRTSETVQNENTDLSLDLDSKNDSKVMA 319
Query: 434 -----NGEEKGASENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYI 598
NGEEK +G F YGEEE++RFNRILKH+VG+HNFHNFTTRTKAEDPSARRYI
Sbjct: 320 EERSVNGEEKLLKGSG--FCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAEDPSARRYI 377
Query: 599 VSFDANNVVSVEGMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVN 778
+SF A++VV+VEG+DF+KCEVVGQSFMLHQIRKMIGLAVAV+RNCAPE LI+TAL++DVN
Sbjct: 378 ISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPESLIETALQKDVN 437
Query: 779 ITVPTAPEVGLYLDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKE 958
I VPTAPEVGLYLDEC+F SYN+KWK+SHEE+SMKAY EEAE FKMK I+SHIA TE KE
Sbjct: 438 INVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSHIARTEQKE 497
Query: 959 GVVALWLHSLNRRNYPDLCFMETD 1030
GVVALWLHSLN RNYPDL F+ D
Sbjct: 498 GVVALWLHSLNYRNYPDLRFLGND 521
>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X2 [Cicer arietinum]
Length = 475
Score = 456 bits (1172), Expect = e-125
Identities = 237/366 (64%), Positives = 279/366 (76%), Gaps = 16/366 (4%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNLP+QIRIFGYKRVTASF+AKKFCDRRRYVYLIPVF+LDP CHRDRE+VLASLG
Sbjct: 105 VDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLG 164
Query: 185 SENELVKCLECSERGRKVVGVMGRFNR----ESRITESDGKGEIESGFGAEXXXXXXXXX 352
SENELVKCLECSERGRKV G++G R E+ E+ KG+
Sbjct: 165 SENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETTDKGDDNRSNKESINDNEGKVS 224
Query: 353 XXXLG-------VVEEENNVFP---SVEANSNL--DVNGNGEEKGASENGVKFHYGEEER 496
+ VV ++ V P E NS + + NGE+ A + +F YGE+ER
Sbjct: 225 VEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEKVNGEDTPAKRS--EFCYGEKER 282
Query: 497 ERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEGMDFVKCEVVGQSF 676
ERFN+ILK +VGTHNFHNFTTR K EDPSA+R+I+SFDA+N V +EGM+FVKCE+VGQSF
Sbjct: 283 ERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASNTVVIEGMEFVKCEIVGQSF 342
Query: 677 MLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYLDECLFTSYNQKWK 856
MLHQIRKM+GLAVA+MRNCAPE LI+ AL+ DV+ITVPTAPEVGLYLDEC FTSYNQKWK
Sbjct: 343 MLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAPEVGLYLDECFFTSYNQKWK 402
Query: 857 ESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRRNYPDLCFMETDGV 1036
++HEE+SMKAY +EAE+FKMK IYSHIA+TE KEG V LWLHSLN RNY DL +E +GV
Sbjct: 403 DTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTVGLWLHSLNHRNYSDLRVVEEEGV 462
Query: 1037 CTTRES 1054
++S
Sbjct: 463 ANEKKS 468
>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X1 [Cicer arietinum]
Length = 505
Score = 456 bits (1172), Expect = e-125
Identities = 237/366 (64%), Positives = 279/366 (76%), Gaps = 16/366 (4%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNLP+QIRIFGYKRVTASF+AKKFCDRRRYVYLIPVF+LDP CHRDRE+VLASLG
Sbjct: 135 VDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLG 194
Query: 185 SENELVKCLECSERGRKVVGVMGRFNR----ESRITESDGKGEIESGFGAEXXXXXXXXX 352
SENELVKCLECSERGRKV G++G R E+ E+ KG+
Sbjct: 195 SENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETTDKGDDNRSNKESINDNEGKVS 254
Query: 353 XXXLG-------VVEEENNVFP---SVEANSNL--DVNGNGEEKGASENGVKFHYGEEER 496
+ VV ++ V P E NS + + NGE+ A + +F YGE+ER
Sbjct: 255 VEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEKVNGEDTPAKRS--EFCYGEKER 312
Query: 497 ERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEGMDFVKCEVVGQSF 676
ERFN+ILK +VGTHNFHNFTTR K EDPSA+R+I+SFDA+N V +EGM+FVKCE+VGQSF
Sbjct: 313 ERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASNTVVIEGMEFVKCEIVGQSF 372
Query: 677 MLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYLDECLFTSYNQKWK 856
MLHQIRKM+GLAVA+MRNCAPE LI+ AL+ DV+ITVPTAPEVGLYLDEC FTSYNQKWK
Sbjct: 373 MLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAPEVGLYLDECFFTSYNQKWK 432
Query: 857 ESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRRNYPDLCFMETDGV 1036
++HEE+SMKAY +EAE+FKMK IYSHIA+TE KEG V LWLHSLN RNY DL +E +GV
Sbjct: 433 DTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTVGLWLHSLNHRNYSDLRVVEEEGV 492
Query: 1037 CTTRES 1054
++S
Sbjct: 493 ANEKKS 498
>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
sinensis]
Length = 526
Score = 452 bits (1163), Expect = e-124
Identities = 237/384 (61%), Positives = 276/384 (71%), Gaps = 41/384 (10%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LV+RLN NLP QIRIFGYKRVTASFNAKKFCD+RRYVYL+PVF+LD + HRDRESV+ASL
Sbjct: 140 LVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVMASL 199
Query: 182 GSENELVKCLECSERGRKVVGVMGRFNRESRITESDGKGEIESGFGAEXXXXXXXXXXXX 361
GS NELVKCLECSERGRKV+GVMG+ + + +D + S +
Sbjct: 200 GSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGDRHN 259
Query: 362 LGVVEEENNVFPSVEA------------------------NSNLDVN------------- 430
+ E+N S A N N D++
Sbjct: 260 TNLESVESNKTISESAMVENANSESVNETLVESRTSETVQNENTDLSLDLDSKNDSKVMA 319
Query: 431 ----GNGEEKGASENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYI 598
NGEEK +G F YGEEE++RFNRILKH+VG+HNFHNFTTRTKAEDPSARRYI
Sbjct: 320 EERSVNGEEKLLKGSG--FCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAEDPSARRYI 377
Query: 599 VSFDANNVVSVEGMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVN 778
+SF A++VV+VEG+DF+KCEVVGQSFMLHQIRKMIGLAVAV+RNCAP+ LI+TAL++DVN
Sbjct: 378 ISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPQSLIETALQKDVN 437
Query: 779 ITVPTAPEVGLYLDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKE 958
I VPTAPEVGLYLDEC+F SYN+KWK+SHEE+SMKAY EEAE FKMK I+SHI TE KE
Sbjct: 438 INVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSHITRTEQKE 497
Query: 959 GVVALWLHSLNRRNYPDLCFMETD 1030
GVVALWLHSLN RNYPDL F+ D
Sbjct: 498 GVVALWLHSLNYRNYPDLHFLGND 521
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
[Medicago truncatula]
Length = 530
Score = 449 bits (1155), Expect = e-123
Identities = 231/379 (60%), Positives = 275/379 (72%), Gaps = 30/379 (7%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNLP+QIRIFG+KRVTASF+AKKFCDRRRYVYLIPVF+LDP CHRDRE+VLASLG
Sbjct: 135 VDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLG 194
Query: 185 SENELVKCLECSERGRKVVGVMGRFNRESRIT-------ESDGKGEIESGFGAEXXXXXX 343
SENELVKCL CSERGRKV GV+G R + S+ ++SG +
Sbjct: 195 SENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKNDVVDSGVTKDVEVSLS 254
Query: 344 XXXXXXLG-----------VVEEENNVFPSVEANSNLDVNGNGE------------EKGA 454
L VEE N+ + + +NG E +
Sbjct: 255 KGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLGILEEEKVNREDT 314
Query: 455 SENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVE 634
+ NG F YGE+ERERFN ILK +VGTHNFHNFTTR K EDPSA+R+I+SFDA+ V VE
Sbjct: 315 AANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVE 374
Query: 635 GMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLY 814
GM+FVKCE+VGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL++DV+ITVPTAPEVGLY
Sbjct: 375 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 434
Query: 815 LDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNR 994
LDEC FTSYNQKWK++HEE+SMKAY +EAE+FKM+ IY HIA+TE+KEG V LWLHSLN
Sbjct: 435 LDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNH 494
Query: 995 RNYPDLCFMETDGVCTTRE 1051
RNYPDL ++ +GV ++
Sbjct: 495 RNYPDLRILDGEGVTNDKK 513
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 449 bits (1155), Expect = e-123
Identities = 231/379 (60%), Positives = 275/379 (72%), Gaps = 30/379 (7%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNLP+QIRIFG+KRVTASF+AKKFCDRRRYVYLIPVF+LDP CHRDRE+VLASLG
Sbjct: 135 VDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLG 194
Query: 185 SENELVKCLECSERGRKVVGVMGRFNRESRIT-------ESDGKGEIESGFGAEXXXXXX 343
SENELVKCL CSERGRKV GV+G R + S+ ++SG +
Sbjct: 195 SENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKNDVVDSGVTKDVEVSLS 254
Query: 344 XXXXXXLG-----------VVEEENNVFPSVEANSNLDVNGNGE------------EKGA 454
L VEE N+ + + +NG E +
Sbjct: 255 KGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLGILEEEKVNREDT 314
Query: 455 SENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVE 634
+ NG F YGE+ERERFN ILK +VGTHNFHNFTTR K EDPSA+R+I+SFDA+ V VE
Sbjct: 315 AANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVE 374
Query: 635 GMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLY 814
GM+FVKCE+VGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL++DV+ITVPTAPEVGLY
Sbjct: 375 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 434
Query: 815 LDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNR 994
LDEC FTSYNQKWK++HEE+SMKAY +EAE+FKM+ IY HIA+TE+KEG V LWLHSLN
Sbjct: 435 LDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNH 494
Query: 995 RNYPDLCFMETDGVCTTRE 1051
RNYPDL ++ +GV ++
Sbjct: 495 RNYPDLGILDGEGVTNDKK 513
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 449 bits (1155), Expect = e-123
Identities = 231/379 (60%), Positives = 275/379 (72%), Gaps = 30/379 (7%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNSNLP+QIRIFG+KRVTASF+AKKFCDRRRYVYLIPVF+LDP CHRDRE+VLASLG
Sbjct: 135 VDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLG 194
Query: 185 SENELVKCLECSERGRKVVGVMGRFNRESRIT-------ESDGKGEIESGFGAEXXXXXX 343
SENELVKCL CSERGRKV GV+G R + S+ ++SG +
Sbjct: 195 SENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKNDVVDSGVTKDVEVSLS 254
Query: 344 XXXXXXLG-----------VVEEENNVFPSVEANSNLDVNGNGE------------EKGA 454
L VEE N+ + + +NG E +
Sbjct: 255 KGDDNHLNKESINDNEGKVSVEEVNSKTVVSDEDEVAPINGGSENNLGILEEEKVNREDT 314
Query: 455 SENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVE 634
+ NG F YGE+ERERFN ILK +VGTHNFHNFTTR K EDPSA+R+I+SFDA+ V VE
Sbjct: 315 AANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVE 374
Query: 635 GMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLY 814
GM+FVKCE+VGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL++DV+ITVPTAPEVGLY
Sbjct: 375 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 434
Query: 815 LDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNR 994
LDEC FTSYNQKWK++HEE+SMKAY +EAE+FKM+ IY HIA+TE+KEG V LWLHSLN
Sbjct: 435 LDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNH 494
Query: 995 RNYPDLCFMETDGVCTTRE 1051
RNYPDL ++ +GV ++
Sbjct: 495 RNYPDLRILDGEGVTNDKK 513
>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028255|gb|ESW26895.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 556
Score = 449 bits (1154), Expect = e-123
Identities = 236/388 (60%), Positives = 278/388 (71%), Gaps = 37/388 (9%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LVDRLNSNL +QIRIFGYKRVT SFNAKKFCDRRRYVYLIPVF+LDP CHRDRE+V+ASL
Sbjct: 103 LVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASL 162
Query: 182 GSENELVKCLECSERGRKVVGVMGRFNRESRITESDGK----------------GEIESG 313
GS NELVKCLECSERGRKVVG++G + D + G++E+
Sbjct: 163 GSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNTDVVLDSVVTGDVEAS 222
Query: 314 F--GAEXXXXXXXXXXXXLGVVEEENNVFPSVEA-----NSNLDVNG------------- 433
G + V+ + N+ +E + + +NG
Sbjct: 223 LSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQDEVMPLNGESVNNSDIIEEEK 282
Query: 434 -NGEEKGASENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFD 610
NGE+K S G F YGE+ERERFN+IL FVGTHNFHNFTTRTKAEDP+ARRYI+SF+
Sbjct: 283 MNGEDKSTS--GSMFCYGEKERERFNKILNCFVGTHNFHNFTTRTKAEDPAARRYIISFN 340
Query: 611 ANNVVSVEGMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVP 790
AN +VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL+QDVNI VP
Sbjct: 341 ANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQDVNINVP 400
Query: 791 TAPEVGLYLDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVA 970
TAPEVGLYLDEC F+SYNQKWK+SHEE+SMKAY +EAEEFKMK IYSHI+ TE KEG VA
Sbjct: 401 TAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKMKYIYSHISFTEQKEGTVA 460
Query: 971 LWLHSLNRRNYPDLCFMETDGVCTTRES 1054
LWLHSLN RNYPDL + + + + +
Sbjct: 461 LWLHSLNHRNYPDLRVVNEEAITDNKSA 488
>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|593783723|ref|XP_007154902.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028254|gb|ESW26894.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028256|gb|ESW26896.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 586
Score = 449 bits (1154), Expect = e-123
Identities = 236/388 (60%), Positives = 278/388 (71%), Gaps = 37/388 (9%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LVDRLNSNL +QIRIFGYKRVT SFNAKKFCDRRRYVYLIPVF+LDP CHRDRE+V+ASL
Sbjct: 133 LVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASL 192
Query: 182 GSENELVKCLECSERGRKVVGVMGRFNRESRITESDGK----------------GEIESG 313
GS NELVKCLECSERGRKVVG++G + D + G++E+
Sbjct: 193 GSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNTDVVLDSVVTGDVEAS 252
Query: 314 F--GAEXXXXXXXXXXXXLGVVEEENNVFPSVEA-----NSNLDVNG------------- 433
G + V+ + N+ +E + + +NG
Sbjct: 253 LSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQDEVMPLNGESVNNSDIIEEEK 312
Query: 434 -NGEEKGASENGVKFHYGEEERERFNRILKHFVGTHNFHNFTTRTKAEDPSARRYIVSFD 610
NGE+K S G F YGE+ERERFN+IL FVGTHNFHNFTTRTKAEDP+ARRYI+SF+
Sbjct: 313 MNGEDKSTS--GSMFCYGEKERERFNKILNCFVGTHNFHNFTTRTKAEDPAARRYIISFN 370
Query: 611 ANNVVSVEGMDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPELLIDTALRQDVNITVP 790
AN +VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MRNCAPE LI+ AL+QDVNI VP
Sbjct: 371 ANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQDVNINVP 430
Query: 791 TAPEVGLYLDECLFTSYNQKWKESHEEISMKAYAEEAEEFKMKQIYSHIAATEHKEGVVA 970
TAPEVGLYLDEC F+SYNQKWK+SHEE+SMKAY +EAEEFKMK IYSHI+ TE KEG VA
Sbjct: 431 TAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKMKYIYSHISFTEQKEGTVA 490
Query: 971 LWLHSLNRRNYPDLCFMETDGVCTTRES 1054
LWLHSLN RNYPDL + + + + +
Sbjct: 491 LWLHSLNHRNYPDLRVVNEEAITDNKSA 518
>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
gi|550339814|gb|EEE94755.2| hypothetical protein
POPTR_0005s26830g [Populus trichocarpa]
Length = 497
Score = 445 bits (1145), Expect = e-122
Identities = 229/341 (67%), Positives = 268/341 (78%), Gaps = 4/341 (1%)
Frame = +2
Query: 2 LVDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASL 181
LV+RL+SNL QIRIFGYKRVT SFNAKKFCDRRRYVYLIPVF+L+P HRDRESVLASL
Sbjct: 134 LVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRESVLASL 193
Query: 182 GSENELVKCLECSERGRKVVGVMGRFNRESRITESDGKGEIESGFGAEXXXXXXXXXXXX 361
GS +ELVKCL+CSERGRKVVG +G+ + ES+ S EI S +
Sbjct: 194 GSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPT--EIWSN-DKDTTLKSEIKEEVS 250
Query: 362 LGVVEEENNVFPSVEANSNLDV-NGNGEEKGASENGVK---FHYGEEERERFNRILKHFV 529
+ E+ N P ++ + + NG+ + + E +K F YGE+E+ERFNRIL +++
Sbjct: 251 ISSNSEDANANPEIKDEIMVSIENGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYL 310
Query: 530 GTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEGMDFVKCEVVGQSFMLHQIRKMIGL 709
G+HNFHNFTTRTKAEDPSA+RYI+SFDA V+VEG++FVKCEVVGQSFMLHQIRKMIG+
Sbjct: 311 GSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVAVEGIEFVKCEVVGQSFMLHQIRKMIGV 370
Query: 710 AVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYLDECLFTSYNQKWKESHEEISMKAY 889
AVA+MRNCA E LI TAL+++VNI VPTAPEVGLYLDEC FTSYNQKWK+SHEE+SMK Y
Sbjct: 371 AVAIMRNCASESLIQTALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDY 430
Query: 890 AEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRRNYPDL 1012
EEAEEFKMK IYSHIA TEHKEG VALWLHSLN RNYPDL
Sbjct: 431 EEEAEEFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDL 471
>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 591
Score = 439 bits (1130), Expect = e-120
Identities = 227/346 (65%), Positives = 265/346 (76%), Gaps = 10/346 (2%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
VDRLNS+L QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVF+LDP+ HRDRESV ASLG
Sbjct: 132 VDRLNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSAHRDRESVKASLG 191
Query: 185 SENELVKCLECSERGRKVVGVMGR----------FNRESRITESDGKGEIESGFGAEXXX 334
S+ E VKCLECS+RGRKV G+MG+ +N ES +TE +++ E
Sbjct: 192 SDEEFVKCLECSDRGRKVGGLMGKRTYQLRGGNSYNSES-VTEISTNDDMKIDNDIEG-- 248
Query: 335 XXXXXXXXXLGVVEEENNVFPSVEANSNLDVNGNGEEKGASENGVKFHYGEEERERFNRI 514
E+N V + + NS +VNG GE+K +G F YGE+E+ERFNRI
Sbjct: 249 --------------EDNVVVGNADMNSAEEVNG-GEKKAVEGSG--FCYGEKEKERFNRI 291
Query: 515 LKHFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEGMDFVKCEVVGQSFMLHQIR 694
L + GTHNFHNFTTRTKAEDP+A RYI+SF AN V+VEG++FVKCEVVGQSFMLHQIR
Sbjct: 292 LSCYQGTHNFHNFTTRTKAEDPAAIRYIISFSANATVTVEGIEFVKCEVVGQSFMLHQIR 351
Query: 695 KMIGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYLDECLFTSYNQKWKESHEEI 874
K+IGLAVA+MRNCAPE L++ AL++DVN+ VPTAPEVGLYLDEC F+SYNQKW ++HEE+
Sbjct: 352 KLIGLAVAIMRNCAPESLLERALQKDVNVNVPTAPEVGLYLDECFFSSYNQKWGDTHEEV 411
Query: 875 SMKAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRRNYPDL 1012
SMK Y EAE FKMK IY+HI ATEHKEGVV LWLHSLN RNYPDL
Sbjct: 412 SMKGYEAEAEAFKMKHIYTHIGATEHKEGVVGLWLHSLNHRNYPDL 457
>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
tuberosum]
Length = 569
Score = 431 bits (1107), Expect = e-118
Identities = 223/344 (64%), Positives = 260/344 (75%), Gaps = 8/344 (2%)
Frame = +2
Query: 5 VDRLNSNLPNQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFSLDPNCHRDRESVLASLG 184
+DRLNS L QIRIFG+KRVT +F+AKKFCD+RRYVYL+PVF+LDP HRDRESVLASLG
Sbjct: 132 IDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRDRESVLASLG 191
Query: 185 SENELVKCLECSERGRKVVGVMGRFNRESRITESDGKGEIESGFGAEXXXXXXXXXXXXL 364
S EL KCL C ERGRKVVGVMGR R+ + + I
Sbjct: 192 SGKELAKCLNCPERGRKVVGVMGR-----RVFDPITQSVIIVDAPVVNANDPTTDTNM-- 244
Query: 365 GVVEEENNVFPSVEANSNLDVNGNGEEKGASENGVK--------FHYGEEERERFNRILK 520
V+E E ++ VE NGE +G++EN F YGE+E+ERFNRILK
Sbjct: 245 -VIENEASLSEKVEER-------NGEVEGSNENAKMEEQVEESVFCYGEKEKERFNRILK 296
Query: 521 HFVGTHNFHNFTTRTKAEDPSARRYIVSFDANNVVSVEGMDFVKCEVVGQSFMLHQIRKM 700
++ GTHNFHNFTTRTKA+DP+A+RYI+SF+AN VV+V+G+DFVKCEVVGQSFMLHQIRKM
Sbjct: 297 YYEGTHNFHNFTTRTKADDPAAKRYIISFNANTVVNVDGIDFVKCEVVGQSFMLHQIRKM 356
Query: 701 IGLAVAVMRNCAPELLIDTALRQDVNITVPTAPEVGLYLDECLFTSYNQKWKESHEEISM 880
IGLAVA+MRNCAPE LI TA R+DVNI VP APEVGLYLDEC FTSYN KWK++HEE+S+
Sbjct: 357 IGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSL 416
Query: 881 KAYAEEAEEFKMKQIYSHIAATEHKEGVVALWLHSLNRRNYPDL 1012
KAY EEAEEFKMK IYSHIA+TE KEG +A+WLHSLN RNYPDL
Sbjct: 417 KAYLEEAEEFKMKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDL 460