BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00014565
         (282 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]       102   4e-20
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li...   102   4e-20
ref|XP_007040142.1| Replication factor C / DNA polymerase III ga...   101   1e-19
ref|XP_007040141.1| Replication factor C 2 isoform 1 [Theobroma ...   101   1e-19
ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutr...   100   2e-19
gb|AFK40126.1| unknown [Medicago truncatula]                          100   2e-19
ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-li...   100   2e-19
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li...   100   2e-19
ref|XP_007155555.1| hypothetical protein PHAVU_003G211700g [Phas...   100   2e-19
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V...   100   3e-19
ref|XP_002509739.1| replication factor C / DNA polymerase III ga...   100   3e-19
dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa...    99   6e-19
ref|XP_006652657.1| PREDICTED: replication factor C subunit 4-li...    99   6e-19
ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana] g...    99   6e-19
ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arab...    99   6e-19
ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [A...    99   8e-19
ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-li...    99   8e-19
ref|XP_002304476.1| replication factor C 40 kDa family protein [...    99   8e-19
ref|XP_007200386.1| hypothetical protein PRUPE_ppa008426mg [Prun...    98   1e-18
ref|XP_004976529.1| PREDICTED: replication factor C subunit 2-li...    98   1e-18

>gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]
          Length = 330

 Score =  102 bits (255), Expect = 4e-20
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = -2

Query: 152 GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           GYDIPWVEKYRPT V D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 9   GYDIPWVEKYRPTNVIDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 58


>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
           gi|449494241|ref|XP_004159490.1| PREDICTED: replication
           factor C subunit 2-like [Cucumis sativus]
          Length = 331

 Score =  102 bits (255), Expect = 4e-20
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YDIPWVEKYRP KVTD+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 11  YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 59


>ref|XP_007040142.1| Replication factor C / DNA polymerase III gamma-tau subunit isoform
           2 [Theobroma cacao] gi|508777387|gb|EOY24643.1|
           Replication factor C / DNA polymerase III gamma-tau
           subunit isoform 2 [Theobroma cacao]
          Length = 393

 Score =  101 bits (251), Expect = 1e-19
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -2

Query: 152 GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           GYD+PWVEKYRP KV+D+VGNEDAVSRLQVIA DGNMPNLILSGPPGTGK
Sbjct: 11  GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGK 60


>ref|XP_007040141.1| Replication factor C 2 isoform 1 [Theobroma cacao]
           gi|590677884|ref|XP_007040143.1| Replication factor C 2
           isoform 1 [Theobroma cacao] gi|508777386|gb|EOY24642.1|
           Replication factor C 2 isoform 1 [Theobroma cacao]
           gi|508777388|gb|EOY24644.1| Replication factor C 2
           isoform 1 [Theobroma cacao]
          Length = 332

 Score =  101 bits (251), Expect = 1e-19
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -2

Query: 152 GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           GYD+PWVEKYRP KV+D+VGNEDAVSRLQVIA DGNMPNLILSGPPGTGK
Sbjct: 11  GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGK 60


>ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutrema salsugineum]
           gi|557088282|gb|ESQ29062.1| hypothetical protein
           EUTSA_v10023584mg [Eutrema salsugineum]
          Length = 333

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/50 (90%), Positives = 49/50 (98%)
 Frame = -2

Query: 152 GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           GY+IPWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLIL+GPPGTGK
Sbjct: 12  GYEIPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK 61


>gb|AFK40126.1| unknown [Medicago truncatula]
          Length = 333

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YD+PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 13  YDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 61


>ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 332

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YD+PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 11  YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 59


>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 331

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YD+PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 10  YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 58


>ref|XP_007155555.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
           gi|561028909|gb|ESW27549.1| hypothetical protein
           PHAVU_003G211700g [Phaseolus vulgaris]
          Length = 330

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YD+PWVEKYRP KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 10  YDVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 58


>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
           gi|297742576|emb|CBI34725.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  100 bits (248), Expect = 3e-19
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YD+PWVEKYRPTKV D+VGNED VSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 10  YDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGK 58


>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223549638|gb|EEF51126.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 333

 Score =  100 bits (248), Expect = 3e-19
 Identities = 44/49 (89%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YD+PWVEKYRP+K+ D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 13  YDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 61


>dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa Japonica Group]
           gi|116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza
           sativa Indica Group] gi|218195393|gb|EEC77820.1|
           hypothetical protein OsI_17026 [Oryza sativa Indica
           Group]
          Length = 335

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YDIPWVEKYRPT+V DVVGN DAV+RLQVIARDGNMPNLILSGPPGTGK
Sbjct: 15  YDIPWVEKYRPTRVADVVGNSDAVARLQVIARDGNMPNLILSGPPGTGK 63


>ref|XP_006652657.1| PREDICTED: replication factor C subunit 4-like [Oryza brachyantha]
          Length = 335

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YDIPWVEKYRPT+V DVVGN DAVSRL+VIARDGNMPNLILSGPPGTGK
Sbjct: 16  YDIPWVEKYRPTRVADVVGNSDAVSRLEVIARDGNMPNLILSGPPGTGK 64


>ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana]
           gi|75169912|sp|Q9CAM7.1|RFC2_ARATH RecName:
           Full=Replication factor C subunit 2; Short=AtRFC2;
           AltName: Full=Activator 1 subunit 2; AltName:
           Full=Protein EMBRYO DEFECTIVE 2811
           gi|12323266|gb|AAG51618.1|AC010795_22 replication
           factor, putative; 74998-73295 [Arabidopsis thaliana]
           gi|182623790|gb|ACB88833.1| At1g63160 [Arabidopsis
           thaliana] gi|332195942|gb|AEE34063.1| replication factor
           C 2 [Arabidopsis thaliana]
          Length = 333

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -2

Query: 152 GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           GY+ PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 12  GYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 61


>ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arabidopsis lyrata subsp.
           lyrata] gi|297332271|gb|EFH62689.1| hypothetical protein
           ARALYDRAFT_475032 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -2

Query: 152 GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           GY+ PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 13  GYNNPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 62


>ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [Amborella trichopoda]
           gi|548861950|gb|ERN19315.1| hypothetical protein
           AMTR_s00069p00063160 [Amborella trichopoda]
          Length = 331

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = -2

Query: 152 GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           GY++PWVEKYRP KV +VVGN+DAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 10  GYELPWVEKYRPVKVAEVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGK 59


>ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-like [Fragaria vesca
           subsp. vesca]
          Length = 329

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/49 (89%), Positives = 48/49 (97%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YD+PWVEKYRPTKV+D+VGNEDAVSRLQVIARDGNMPNLIL+GPPG GK
Sbjct: 9   YDMPWVEKYRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGIGK 57


>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
           gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
           family protein [Populus trichocarpa]
          Length = 330

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YDIPWVEKYRP KV D+VGN+DAVSRLQVIARDGNMPNLIL+GPPGTGK
Sbjct: 10  YDIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGK 58


>ref|XP_007200386.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
           gi|462395786|gb|EMJ01585.1| hypothetical protein
           PRUPE_ppa008426mg [Prunus persica]
          Length = 332

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YDIPWVEKYRP+ V D+VGNEDAVSRLQVIARDGNMPNLIL+GPPGTGK
Sbjct: 12  YDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK 60


>ref|XP_004976529.1| PREDICTED: replication factor C subunit 2-like [Setaria italica]
          Length = 336

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = -2

Query: 149 YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 3
           YDIPWVEKYRPT+V DVVGN DAV+RL+VIARDGNMPNLILSGPPGTGK
Sbjct: 16  YDIPWVEKYRPTRVADVVGNSDAVARLEVIARDGNMPNLILSGPPGTGK 64