BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00014177
         (856 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]   360   4e-97
ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containi...   359   8e-97
ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containi...   347   3e-93
ref|XP_004240612.1| PREDICTED: pentatricopeptide repeat-containi...   343   6e-92
ref|XP_006358719.1| PREDICTED: pentatricopeptide repeat-containi...   342   1e-91
ref|XP_006488668.1| PREDICTED: pentatricopeptide repeat-containi...   337   3e-90
ref|XP_006424883.1| hypothetical protein CICLE_v10029970mg [Citr...   337   3e-90
ref|XP_004295975.1| PREDICTED: pentatricopeptide repeat-containi...   337   3e-90
gb|EXC10706.1| hypothetical protein L484_025290 [Morus notabilis]     323   4e-86
ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containi...   322   1e-85
ref|XP_004507163.1| PREDICTED: pentatricopeptide repeat-containi...   319   1e-84
ref|XP_003606718.1| Pentatricopeptide repeat-containing protein ...   318   1e-84
ref|XP_007016350.1| Tetratricopeptide repeat (TPR)-like superfam...   311   2e-82
ref|XP_002520533.1| pentatricopeptide repeat-containing protein,...   311   3e-82
ref|XP_007132042.1| hypothetical protein PHAVU_011G062000g [Phas...   310   5e-82
ref|XP_002866341.1| pentatricopeptide repeat-containing protein ...   300   4e-79
ref|XP_007208585.1| hypothetical protein PRUPE_ppa023060mg [Prun...   291   3e-76
ref|NP_200768.1| pentatricopeptide repeat-containing protein [Ar...   287   4e-75
ref|XP_006400940.1| hypothetical protein EUTSA_v10013206mg [Eutr...   283   8e-74
ref|XP_006282115.1| hypothetical protein CARUB_v10028363mg [Caps...   276   7e-72

>emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  360 bits (924), Expect = 4e-97
 Identities = 172/285 (60%), Positives = 225/285 (78%)
 Frame = +1

Query: 1    RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
            RK+FD+IP +++ RW+VL GA +R+G+Y+EAL  F EMQ+E LRPN+++LPS+L+AC +L
Sbjct: 858  RKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL 917

Query: 181  SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
            SDR TGE +H +IL++ F SDA++IS+L  MYSKCG VEKA RVF+    KDLV+ N+M+
Sbjct: 918  SDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMV 977

Query: 361  SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
            SGYA  GF  EA++L+ KM+  G KP++V+WN +IAGFSQVG+  M  E+F++M A+ +E
Sbjct: 978  SGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVE 1037

Query: 541  PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
            PDV+SWTSV+SGFVQ+F NHE FD FK ML  G  PS+ TISSLLPA   VAN R GKEI
Sbjct: 1038 PDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEI 1097

Query: 721  HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
            HGYA+V GVE+D++V S+LVDMYAKCG I EA+ LF  M E+NTV
Sbjct: 1098 HGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTV 1142



 Score =  125 bits (314), Expect = 2e-26
 Identities = 74/319 (23%), Positives = 160/319 (50%), Gaps = 35/319 (10%)
 Frame = +1

Query: 4    KVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLS 183
            +V+D++     +    LI AY+R G++ +A ++F ++     RPN Y   ++L  C  +S
Sbjct: 169  RVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTIS 228

Query: 184  DRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMIS 363
                G+++H  +++  + S+  V ++L  +YSKCG +E+A  VF +   ++++ W + I+
Sbjct: 229  AIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASIN 288

Query: 364  GYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAG------------------------ 471
            G+   G  ++A+   + M+  G +P+  T++ V+A                         
Sbjct: 289  GFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMAS 348

Query: 472  -----------FSQVGESEMALELFQIMRADDIEPDVISWTSVVSGFVQSFQNHEAFDTF 618
                       +S +GE + A + F+ M         +SW ++++G+V + +  +A + F
Sbjct: 349  GVFVGTAIIDMYSGLGEMDEAEKQFKQMGR---AASNVSWNALIAGYVLNEKIEKAMEAF 405

Query: 619  KRMLGAGIKPSTYTISSLLPAYATVANSRSGKEIHGYALVSGVEEDIFVCSSLVDMYAKC 798
             RM+   +  + +T S++  A ++  +  +  +IH   + S VE ++ V SSL++ Y +C
Sbjct: 406  CRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQC 465

Query: 799  GLIFEAEKLFDKMCEKNTV 855
            G +  A ++F ++ + + V
Sbjct: 466  GSLENAVQVFTQISDADVV 484



 Score =  114 bits (286), Expect = 4e-23
 Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 35/270 (12%)
 Frame = +1

Query: 133 PNEYILPSVLRACANLSDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRV 312
           P+   + S L  C        G + H  +++    SD FV +SL DMY+KCG+V+ A RV
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170

Query: 313 FNAATIKDLVIWNSMISGYALQGFPREAMDLLNKMKGQGEKPSLVTW------------- 453
           ++  T  D    N +IS YA  GF  +A  +  ++   G +P+  T+             
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230

Query: 454 ----------------------NAVIAGFSQVGESEMALELFQIMRADDIEPDVISWTSV 567
                                 NA++  +S+ G  E A  +F+ +R    + ++ISWT+ 
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLR----QRNIISWTAS 286

Query: 568 VSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEIHGYALVSGV 747
           ++GF Q     +A   F  M  +GI+P+ +T S +L +   V +   G+  H   +  G+
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGM 346

Query: 748 EEDIFVCSSLVDMYAKCGLIFEAEKLFDKM 837
              +FV ++++DMY+  G + EAEK F +M
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQM 376



 Score =  110 bits (275), Expect = 7e-22
 Identities = 79/274 (28%), Positives = 138/274 (50%), Gaps = 2/274 (0%)
 Frame = +1

Query: 4    KVFDQIPQSSLS-RWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
            K F Q+ +++ +  W  LI  Y      ++A+E F  M +ED+  NE+   ++ +AC++ 
Sbjct: 371  KQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSF 430

Query: 181  SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
                T  +IH  +++    S+  V SSL + Y++CG +E A +VF   +  D+V WNS+I
Sbjct: 431  PSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSII 490

Query: 361  SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DI 537
              Y+  G P +A+ LL KM  +G KP+  T+  V++  S  G  +   E F+ M  D  I
Sbjct: 491  KAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSI 550

Query: 538  EPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKE 717
            +P+    + +V    ++ Q   A D  K++    +KP+      LL A    +N +  + 
Sbjct: 551  QPEETHCSCMVDILGRAGQLENALDFIKKLT---MKPTASIWRPLLAACRYNSNLQMAEY 607

Query: 718  IHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAE 819
            +    ++     D  V  +L +MYA+ G   +AE
Sbjct: 608  V-AEKILDLEPNDATVYVTLSNMYAEVGRWADAE 640



 Score =  107 bits (266), Expect = 8e-21
 Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 1/214 (0%)
 Frame = +1

Query: 43   WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
            W  +I  + +  +  E  + F+EM  +   P+   + S+L AC N+++   G++IHG  +
Sbjct: 1043 WTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAM 1102

Query: 223  RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                  D +V S+L DMY+KCG + +A  +F     ++ V WNS+I GYA  G+  EA++
Sbjct: 1103 VIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIE 1162

Query: 403  LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
            L N+M+    K   +T+ AV+   S  G  E+   LF  M+    IEP +  +  +V   
Sbjct: 1163 LFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLL 1222

Query: 580  VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
             ++ +  EA+D  K M    ++P  +   +LL A
Sbjct: 1223 GRAGKLSEAYDLIKAM---PVEPDKFVWGALLGA 1253



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 31/133 (23%), Positives = 75/133 (56%)
 Frame = +1

Query: 457 AVIAGFSQVGESEMALELFQIMRADDIEPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGA 636
           ++I  +++ GE + A+ ++  M +     D  +   ++S + ++    +AF  F ++   
Sbjct: 153 SLIDMYAKCGEVDSAVRVYDKMTS----LDAATCNCLISAYARNGFFVQAFQVFMQIGNM 208

Query: 637 GIKPSTYTISSLLPAYATVANSRSGKEIHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEA 816
           G +P+ YT S++L    T++  + GK++H + +      +  V ++L+ +Y+KCG++ EA
Sbjct: 209 GTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEA 268

Query: 817 EKLFDKMCEKNTV 855
           E +F+ + ++N +
Sbjct: 269 EIVFESLRQRNII 281


>ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Vitis vinifera]
          Length = 545

 Score =  359 bits (921), Expect = 8e-97
 Identities = 172/285 (60%), Positives = 225/285 (78%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RK+FD+IP +++ RW+VL GA +R+G+Y+EAL  F EMQ+E LRPN+++LPS+L+AC +L
Sbjct: 82  RKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL 141

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
           SDR TGE +H +IL++ F SDA++IS+L  MYSKCG VEKA RVF+    KDLV+ N+M+
Sbjct: 142 SDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMV 201

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA  GF  EA++L+ KM+  G KP++V+WN +IAGFSQVG+  M  E+F++M A+ +E
Sbjct: 202 SGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVE 261

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTSV+SGFVQ+F NHE FD FK ML  G  PS+ TISSLLPA   VAN R GKEI
Sbjct: 262 PDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEI 321

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGYA+V GVE+D++V S+LVDMYAKCG I EA+ LF  M E+NTV
Sbjct: 322 HGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTV 366



 Score =  107 bits (268), Expect = 4e-21
 Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I  + +  +  E  + F+EM  +   P+   + S+L AC N+++   G++IHG  +
Sbjct: 267 WTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAM 326

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F     ++ V WNS+I GYA  G+  EA++
Sbjct: 327 VIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIE 386

Query: 403 LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
           L N+M+    K   +T+ AV+   S  G  E+   LF+ M+    IEP +  +  +V   
Sbjct: 387 LFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLL 446

Query: 580 VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
            ++ +  EA+D  K M    ++P  +   +LL A
Sbjct: 447 GRAGKLSEAYDLIKAM---PVEPDKFVWGALLGA 477


>ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
           gi|449496662|ref|XP_004160192.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
          Length = 547

 Score =  347 bits (891), Expect = 3e-93
 Identities = 169/284 (59%), Positives = 224/284 (78%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           R +FD+IP+++  RW+VLIGAYSR GYY EAL +F E+QR  LRP+EYI+PSVL+AC +L
Sbjct: 83  RILFDKIPRTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHL 142

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
           S++ TG K+H LIL++   SDA+V S+L DMY+K G+VEKA RVF +   KDLV  N+M+
Sbjct: 143 SEKTTGRKLHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMV 202

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA  G   EA++L+ +M+  G KP+LVTWN ++ GFSQ+GE EM  ELF+ M A+ IE
Sbjct: 203 SGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEMEANGIE 262

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTSV+SGFVQ+F+N EAFDTF+RML AG  P++ TISSLLPA A+V N R GKEI
Sbjct: 263 PDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEI 322

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNT 852
           HG++L  GVE+D++V ++LVDMYAKCG  +EA+ LF +M E+N+
Sbjct: 323 HGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNS 366



 Score =  108 bits (270), Expect = 3e-21
 Identities = 68/215 (31%), Positives = 112/215 (52%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I  + +    +EA + FR M      P    + S+L ACA++ +   G++IHG  L
Sbjct: 268 WTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSL 327

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V ++L DMY+KCG   +A  +F   + ++   WNSMI GYA  G+  EA++
Sbjct: 328 ALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIE 387

Query: 403 LLNKMKGQGEKP-SLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L ++MK   EK    +T+ A++   +  G  ++   LFQ+M++   I P V  +  +V  
Sbjct: 388 LFHQMKDDDEKKLDHLTFTAILTACAHAGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDV 447

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
           F ++ +  EA+D  K M    +KP  Y   +LL A
Sbjct: 448 FGRAGKLAEAYDLIKTM---PVKPDLYVWGALLGA 479



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 32/100 (32%), Positives = 57/100 (57%)
 Frame = +1

Query: 556 WTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEIHGYAL 735
           W  ++  + +     EA   F  +   G++PS Y I S+L A   ++   +G+++H   L
Sbjct: 97  WIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLIL 156

Query: 736 VSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
            + +E D +VCS+L+DMYAK G + +A ++F+ M  K+ V
Sbjct: 157 KNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLV 196


>ref|XP_004240612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Solanum lycopersicum]
          Length = 527

 Score =  343 bits (879), Expect = 6e-92
 Identities = 163/285 (57%), Positives = 220/285 (77%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RK+FD+IPQS   RW+VLIGAY+R+G+Y+EA+ +F EMQ+   +PN+++LPSVL+AC   
Sbjct: 63  RKLFDKIPQSDTRRWIVLIGAYARRGFYEEAMCVFHEMQKGGKKPNKFVLPSVLKACGRF 122

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
           +D  TGE +HG+IL++ F  D++V+S+L DMYSKCG+VEKA RVFN    KDLV  N+++
Sbjct: 123 NDFRTGEILHGVILKNMFEFDSYVVSALIDMYSKCGRVEKAKRVFNGTVDKDLVALNALV 182

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SG   QG   EA+DL+ +MK QG KP++VT+N +IAGFSQ  +  M  ++ ++M  D +E
Sbjct: 183 SGCVQQGIVNEALDLVEEMKVQGMKPNVVTYNTLIAGFSQEDDQGMVCKVVELMHDDGLE 242

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
            DV+SWTS+VSG VQ+F N EAFDTFKRML  G  PS+ TISS+LPA ATV +   GKE+
Sbjct: 243 LDVVSWTSIVSGLVQNFHNKEAFDTFKRMLDDGTSPSSATISSILPACATVVDLIRGKEV 302

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGYA+V G+E+D++V S+L+DMYAKCG I EA+ LF KMCE+NTV
Sbjct: 303 HGYAVVMGIEKDVYVKSALIDMYAKCGFISEAKHLFSKMCERNTV 347



 Score =  106 bits (265), Expect = 1e-20
 Identities = 64/215 (29%), Positives = 112/215 (52%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  ++    +  + +EA + F+ M  +   P+   + S+L ACA + D   G+++HG  +
Sbjct: 248 WTSIVSGLVQNFHNKEAFDTFKRMLDDGTSPSSATISSILPACATVVDLIRGKEVHGYAV 307

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F+    ++ V WNSMI GYA  G+  EA++
Sbjct: 308 VMGIEKDVYVKSALIDMYAKCGFISEAKHLFSKMCERNTVTWNSMIFGYANHGYCSEAIE 367

Query: 403 LLNKM-KGQGEKPSLVTWNAVIAGFSQVGESEMALELF-QIMRADDIEPDVISWTSVVSG 576
           L N+M + +  KP  +T+ A +   S  G  +    LF Q+     I+P +  +  +V  
Sbjct: 368 LFNQMLREEDRKPDHLTFTAALTACSHAGLVQYGESLFKQMQEMYTIKPRLEHFACMVDL 427

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
             ++ +  EA+D  +RM    I+P  +   +LL A
Sbjct: 428 LGRAGKLDEAYDLIQRM---SIEPDLFVWGALLGA 459


>ref|XP_006358719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Solanum tuberosum]
          Length = 527

 Score =  342 bits (876), Expect = 1e-91
 Identities = 166/285 (58%), Positives = 221/285 (77%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RK+FD+IP+S   RW+VLIGAY+R+G+Y+EA+ +F EMQR   +PN+++LPSVL+AC   
Sbjct: 63  RKLFDKIPKSDSRRWIVLIGAYARRGFYEEAMGVFYEMQRGGKKPNKFVLPSVLKACGRF 122

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
           +D  TGE +HG+IL++ F  D++V+S+L DMYSKCG+VEKA RVFN    KDLV  N++I
Sbjct: 123 NDFRTGEILHGVILKNKFEFDSYVVSALIDMYSKCGRVEKAKRVFNGTVNKDLVSLNALI 182

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SG   QG   EA+DL+ +MK QG KP++VT+N +IAGFSQ  +  +  ++ ++M  D +E
Sbjct: 183 SGCVQQGIVNEALDLVEEMKVQGMKPNVVTYNTLIAGFSQEDDRGVVCKVVELMHDDGLE 242

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
            DV+SWTS+VSG VQ+F N EAFDTFKRML  GI PS+ TISS+LPA ATV +   GKEI
Sbjct: 243 LDVVSWTSIVSGLVQNFHNKEAFDTFKRMLDDGICPSSATISSILPACATVVDLIRGKEI 302

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGYA+V G+E+D++V S+L+DMYAKCG I EA+ LF KMCEKNTV
Sbjct: 303 HGYAVVMGIEKDVYVKSALIDMYAKCGFISEAKHLFSKMCEKNTV 347



 Score =  107 bits (266), Expect = 8e-21
 Identities = 66/215 (30%), Positives = 114/215 (53%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  ++    +  + +EA + F+ M  + + P+   + S+L ACA + D   G++IHG  +
Sbjct: 248 WTSIVSGLVQNFHNKEAFDTFKRMLDDGICPSSATISSILPACATVVDLIRGKEIHGYAV 307

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F+    K+ V WNSMI GYA  G+  EA++
Sbjct: 308 VMGIEKDVYVKSALIDMYAKCGFISEAKHLFSKMCEKNTVTWNSMIFGYANHGYCSEAIE 367

Query: 403 LLNKMKGQGE-KPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L N+M  + E KP  +T+ A +   S  G  +    LF++M+    I+P +  +  +V  
Sbjct: 368 LFNQMLREEERKPDHLTFIAALTACSHAGLVQYGESLFKLMQEKYTIKPRLEHFACMVDL 427

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
             ++ +  EA+D  + M    I+P  +   +LL A
Sbjct: 428 LGRAGKLDEAYDLIQTM---SIEPDLFVWGALLGA 459


>ref|XP_006488668.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Citrus sinensis]
          Length = 595

 Score =  337 bits (865), Expect = 3e-90
 Identities = 163/285 (57%), Positives = 217/285 (76%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           R +FD+IP++++ RW+ L GAY+R+GY+QEA+ +F EM  + L+ N +++PSVL+AC +L
Sbjct: 133 RMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHL 192

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
           SD  TGEKIH L+L+H F +DAFV+SSL DMYSKCG VEKA +VF+    KD+V  N+M+
Sbjct: 193 SDISTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMV 252

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGY  +G   EA++L+ ++     KP++VTWN +IAGFS+ G+  M  +LFQ+MRA+ +E
Sbjct: 253 SGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLIAGFSKRGDQVMVSKLFQLMRANGVE 312

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTSV+SG V +F N EAFDTFK ML  G  P++ TISS+LPA A+ AN R GKEI
Sbjct: 313 PDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANIRRGKEI 372

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HG A+V GVE D+ V S+LVDMYAKCG I EA  LFDKM E+NTV
Sbjct: 373 HGCAIVIGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTV 417



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
 Frame = +1

Query: 43   WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
            W  +I          EA + F+EM  +   P    + S+L ACA+ ++   G++IHG  +
Sbjct: 318  WTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANIRRGKEIHGCAI 377

Query: 223  RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                  D  V S+L DMY+KCG + +A  +F+  + ++ V WNSMI G A  G+  EA +
Sbjct: 378  VIGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEATE 437

Query: 403  LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
            L N+M+ + +K   +++ AV+      G  E+   LF +M+    I P    +  +V   
Sbjct: 438  LFNQME-ERKKLDHLSFTAVLTACCHAGLVELGQRLFNMMQEKYKIIPRTEHYACMVDLL 496

Query: 580  VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEIHGYALVSGVEEDI 759
             ++ +  EA++  K M     +P  +   +LL A     N     EI    L     E  
Sbjct: 497  GRAGRLAEAYEMIKTM---STEPDLFVWGALLGACKNHGNIELA-EIAAKHLSELEPESA 552

Query: 760  FVCSSLVDMYAKCGLIFEAEKLFDKMCEK 846
                 L D+YA  G   +  +L  KM +K
Sbjct: 553  ANNMLLTDLYANAGRWSKVTRL-KKMMKK 580


>ref|XP_006424883.1| hypothetical protein CICLE_v10029970mg [Citrus clementina]
           gi|557526817|gb|ESR38123.1| hypothetical protein
           CICLE_v10029970mg [Citrus clementina]
          Length = 595

 Score =  337 bits (865), Expect = 3e-90
 Identities = 163/285 (57%), Positives = 216/285 (75%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           R +FD+IP++++ RW+ L GAY+R+GY+QEA+ +F EM  + L+ N +++PSVL+AC +L
Sbjct: 133 RMLFDEIPKTNIHRWIALTGAYARRGYHQEAVTVFHEMHIQGLKQNIFVIPSVLKACGHL 192

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
           SD  TGEKIH L+L+H F +DAFV+SSL DMYSKCG VEKA +VF+    KD+V  N+M+
Sbjct: 193 SDISTGEKIHSLVLKHSFGTDAFVVSSLIDMYSKCGSVEKAKKVFDEMVEKDIVAMNAMV 252

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGY  +G   EA++L+ ++     KP++VTWN +IAGFS  G+  M  +LFQ+MRA+ +E
Sbjct: 253 SGYVQRGLATEALNLVEEIGTPRVKPNVVTWNTLIAGFSNRGDQVMVSKLFQLMRANGVE 312

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTSV+SG V +F N EAFDTFK ML  G  P++ TISS+LPA A+ AN R GKEI
Sbjct: 313 PDVVSWTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEI 372

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HG A+V GVE D+ V S+LVDMYAKCG I EA  LFDKM E+NTV
Sbjct: 373 HGCAIVIGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTV 417



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
 Frame = +1

Query: 43   WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
            W  +I          EA + F+EM  +   P    + S+L ACA+ ++   G++IHG  +
Sbjct: 318  WTSVISGLVHNFCNDEAFDTFKEMLSQGFCPTSATISSILPACASAANMRRGKEIHGCAI 377

Query: 223  RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                  D  V S+L DMY+KCG + +A  +F+  + ++ V WNSMI G A  G+  EA++
Sbjct: 378  VIGVEGDLHVRSALVDMYAKCGFISEARTLFDKMSERNTVTWNSMIFGCANHGYCDEAIE 437

Query: 403  LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
            L N+M+ + +K   +++ AV+      G  E+   LF +M+    I P    +  +V   
Sbjct: 438  LFNQME-ERKKHDHLSFTAVLTACCHAGLVELGQRLFNMMQEKYKIIPRTEHYACMVDLL 496

Query: 580  VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEIHGYALVSGVEEDI 759
             ++ +  EA++  K M     +P  +   +LL A     N     EI    L     E  
Sbjct: 497  GRAGRLTEAYEMIKTM---STEPDLFVWGALLGACKNHGNIELA-EIAAKHLSELEPESA 552

Query: 760  FVCSSLVDMYAKCGLIFEAEKLFDKMCEK 846
                 L D+YA  G   +  +L  KM +K
Sbjct: 553  ANNMLLTDLYANAGRWSKVTRL-KKMMKK 580


>ref|XP_004295975.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Fragaria vesca subsp. vesca]
          Length = 532

 Score =  337 bits (865), Expect = 3e-90
 Identities = 165/285 (57%), Positives = 217/285 (76%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           R +FD IP++++ RW  LIGAY+R G+YQ+A+++F EMQRE  RPN  ++PSVL+AC +L
Sbjct: 68  RNLFDGIPKTNIRRWFALIGAYARSGFYQQAMDVFSEMQREGCRPNRIVIPSVLKACGHL 127

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
           SD  TGEK+H ++LRH F  DAFV S++ DMYSK G+VEKA RVF+    KD V  N+++
Sbjct: 128 SDVGTGEKLHAVVLRHAFEFDAFVSSAIIDMYSKNGRVEKARRVFDMMVDKDSVALNAVV 187

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SG+  +G   EA+ LL +M+  G K +L+TWN ++AGFSQ G+  MA  LF++M  D IE
Sbjct: 188 SGFCQRGMADEALVLLEEMQVVGIKANLITWNTLVAGFSQKGDEAMASRLFKLMPVDGIE 247

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTSV+SGFV++FQN +AF TFK+ML +GI P+  TISSLLPA A V N R GKEI
Sbjct: 248 PDVVSWTSVISGFVKNFQNSKAFHTFKQMLDSGILPTPATISSLLPACAAVTNLRCGKEI 307

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           H YALV GVE D++V S+LVDMYAKCG I+EA+ LF +M E+NTV
Sbjct: 308 HAYALVIGVEADVYVRSALVDMYAKCGFIYEAKTLFCRMSERNTV 352



 Score =  102 bits (254), Expect = 2e-19
 Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 2/221 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I  + +     +A   F++M    + P    + S+L ACA +++   G++IH   L
Sbjct: 253 WTSVISGFVKNFQNSKAFHTFKQMLDSGILPTPATISSLLPACAAVTNLRCGKEIHAYAL 312

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                +D +V S+L DMY+KCG + +A  +F   + ++ V WNSMI GYA  G+  EA++
Sbjct: 313 VIGVEADVYVRSALVDMYAKCGFIYEAKTLFCRMSERNTVTWNSMIFGYANHGYCTEAIE 372

Query: 403 LLNKMKGQGE-KPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L NKMK +   K   +T+ AV+      G  E+   LF++M+ D  I P +  +  +V  
Sbjct: 373 LFNKMKTEDSMKLDYLTFVAVLTACCHAGMIELGKSLFRLMQEDHGIMPRLEHYACMVDL 432

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVAN 699
             ++    EA+D  K M    ++P  +   +LL A     N
Sbjct: 433 LGRAGNLTEAYDMIKAM---PMEPDLFVWGALLGASRNYGN 470


>gb|EXC10706.1| hypothetical protein L484_025290 [Morus notabilis]
          Length = 544

 Score =  323 bits (829), Expect = 4e-86
 Identities = 164/284 (57%), Positives = 209/284 (73%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RK+FD+IPQ+++ RW+VLIGAY+R G+YQ+ LE+FR+MQRE LR +  ++PSVL+AC +L
Sbjct: 80  RKLFDEIPQTNIRRWIVLIGAYARCGFYQQTLEVFRKMQREGLRHDIIVIPSVLKACGHL 139

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
                GE +H +IL+  F  D FVIS+L DMYSK GQVEKA  +F+    KDLV  N+++
Sbjct: 140 FYARIGEVVHAVILKCSFGFDVFVISALIDMYSKTGQVEKARCIFDEMVEKDLVALNALV 199

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA  G P + + L+ KM+  G  P+LVTWN +IAGFSQ GE EM   LF +M    +E
Sbjct: 200 SGYAQDGQPEKGLSLVEKMEVGGLTPNLVTWNTLIAGFSQKGEDEMVSHLFDLMHDKGVE 259

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PD +SWTSV+SG VQ+F+N EAFD FK+ML  G  P++ TISSLL A + VAN R GKEI
Sbjct: 260 PDYVSWTSVISGLVQNFRNKEAFDRFKQMLNHGFCPTSATISSLLSACSAVANIRFGKEI 319

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNT 852
           HG+ALV GVE+DIFV S+LVDMY KCG I EA  LF KM E+NT
Sbjct: 320 HGHALVIGVEKDIFVRSALVDMYGKCGFIDEARGLFFKMSERNT 363



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I    +    +EA + F++M      P    + S+L AC+ +++   G++IHG  L
Sbjct: 265 WTSVISGLVQNFRNKEAFDRFKQMLNHGFCPTSATISSLLSACSAVANIRFGKEIHGHAL 324

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D FV S+L DMY KCG +++A  +F   + ++   WNSMI GYA  G+  EA++
Sbjct: 325 VIGVEKDIFVRSALVDMYGKCGFIDEARGLFFKMSERNTATWNSMIFGYANNGYCNEAIE 384

Query: 403 LLNKMKGQGEKP-SLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L N+M+ + EK    +T+ AV+   S     ++   LF +M+    I P +  +  ++  
Sbjct: 385 LFNQMEKEDEKKLDHLTFTAVLTACSHARMLDLGQSLFDLMQEKYRIIPRLEHYACLIDL 444

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
             ++ + +EA+D  K M    I+P  +   +LL A
Sbjct: 445 LGRAGKLNEAYDMIKAM---PIEPDLFVWGALLGA 476



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = +1

Query: 460 VIAGFSQVGESEMALELFQIMRADDI-EPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGA 636
           ++A ++  G+   A +LF     D+I + ++  W  ++  + +     +  + F++M   
Sbjct: 66  LMAFYTLCGKPTDARKLF-----DEIPQTNIRRWIVLIGAYARCGFYQQTLEVFRKMQRE 120

Query: 637 GIKPSTYTISSLLPAYATVANSRSGKEIHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEA 816
           G++     I S+L A   +  +R G+ +H   L      D+FV S+L+DMY+K G + +A
Sbjct: 121 GLRHDIIVIPSVLKACGHLFYARIGEVVHAVILKCSFGFDVFVISALIDMYSKTGQVEKA 180

Query: 817 EKLFDKMCEKNTV 855
             +FD+M EK+ V
Sbjct: 181 RCIFDEMVEKDLV 193


>ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Glycine max]
          Length = 548

 Score =  322 bits (825), Expect = 1e-85
 Identities = 162/287 (56%), Positives = 214/287 (74%), Gaps = 2/287 (0%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQR-EDLRPNE-YILPSVLRACA 174
           RK+FD+IP +++ RW+ LIG+ +R G+Y  AL +F EMQ  + L PN  +++PSVL+AC 
Sbjct: 82  RKLFDKIPTTNVRRWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACG 141

Query: 175 NLSDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNS 354
           ++ DR TGEKIHG IL+  F  D+FV SSL  MYSKC +VE A +VF+  T+KD V  N+
Sbjct: 142 HVGDRITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKDTVALNA 201

Query: 355 MISGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADD 534
           +++GY  QG   EA+ L+  MK  G KP++VTWN++I+GFSQ G+     E+F++M AD 
Sbjct: 202 VVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIADG 261

Query: 535 IEPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGK 714
           +EPDV+SWTSV+SGFVQ+F+N EAFDTFK+ML  G  P++ TIS+LLPA AT A    G+
Sbjct: 262 VEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGR 321

Query: 715 EIHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           EIHGYALV+GVE DI+V S+LVDMYAKCG I EA  LF +M EKNTV
Sbjct: 322 EIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKNTV 368



 Score =  110 bits (276), Expect = 5e-22
 Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I  + +    +EA + F++M      P    + ++L ACA  +    G +IHG  L
Sbjct: 269 WTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYAL 328

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F+    K+ V WNS+I G+A  G+  EA++
Sbjct: 329 VTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIE 388

Query: 403 LLNKMKGQG-EKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L N+M+ +G  K   +T+ A +   S VG+ E+   LF+IM+    IEP +  +  +V  
Sbjct: 389 LFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDL 448

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
             ++ + HEA+   K M    I+P  +   +LL A
Sbjct: 449 LGRAGKLHEAYCMIKTM---PIEPDLFVWGALLAA 480


>ref|XP_004507163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cicer arietinum]
          Length = 550

 Score =  319 bits (817), Expect = 1e-84
 Identities = 162/287 (56%), Positives = 212/287 (73%), Gaps = 2/287 (0%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQR-EDLRPNE-YILPSVLRACA 174
           RK+FD+IPQ+++ RW  LI   +R G+Y  AL +F EMQ    L+PN  +++PSVL+AC 
Sbjct: 84  RKLFDKIPQTNVRRWTALISTCARCGFYDHALSVFSEMQTLHGLKPNNVFVIPSVLKACG 143

Query: 175 NLSDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNS 354
           ++ DR +GEKIH L+L+  F  DAFV S+L  MYSKC +VE A +VF+   +KDLV  N+
Sbjct: 144 HVGDRISGEKIHCLVLKCSFEIDAFVSSALIVMYSKCSKVEDARKVFDGMAMKDLVALNA 203

Query: 355 MISGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADD 534
           ++SGYA QG P EA  L+  MK  G  P++VTWNA+I+GF+Q  +  M  E+F++M  DD
Sbjct: 204 VVSGYAQQGLPNEAFGLVKNMKLMGMNPNVVTWNALISGFAQRCDRAMVSEIFRLMIEDD 263

Query: 535 IEPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGK 714
           +EPDV+SWTSV+SGFVQ+F N EAFDTFK+MLG G+ P++ T+S+LLPA AT A  R GK
Sbjct: 264 VEPDVVSWTSVISGFVQNFCNDEAFDTFKQMLGHGLCPTSATVSALLPACATAARVRFGK 323

Query: 715 EIHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           EIH YALV GVE D++V S+LVDMYAKCG I EA  LF K+ EKNTV
Sbjct: 324 EIHSYALVIGVEGDVYVRSALVDMYAKCGFISEARTLFYKIPEKNTV 370



 Score =  102 bits (254), Expect = 2e-19
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I  + +     EA + F++M    L P    + ++L ACA  +    G++IH   L
Sbjct: 271 WTSVISGFVQNFCNDEAFDTFKQMLGHGLCPTSATVSALLPACATAARVRFGKEIHSYAL 330

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F     K+ V  NSMI GYA  G+  EA++
Sbjct: 331 VIGVEGDVYVRSALVDMYAKCGFISEARTLFYKIPEKNTVTMNSMIFGYANHGYCEEAIE 390

Query: 403 LLNKMKGQGE-KPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L N+M+ + E KP  +T+ A +   S VG+ E+   LF+IM+    IEP +  +  +V  
Sbjct: 391 LFNRMEMEEEVKPDHLTFTATLTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDL 450

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
             ++ +  EA+   K M    ++P  +   +LL A
Sbjct: 451 LGRAGKLEEAYGIIKTM---PMEPDLFVWGALLAA 482


>ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355507773|gb|AES88915.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  318 bits (816), Expect = 1e-84
 Identities = 160/287 (55%), Positives = 213/287 (74%), Gaps = 2/287 (0%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQR-EDLRPNE-YILPSVLRACA 174
           RK+FD+IPQ+++ RW+ LI   +R G++  ALE+F EMQ   D + N  +++PSVL+AC 
Sbjct: 84  RKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACG 143

Query: 175 NLSDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNS 354
           ++ DR  GE++H L+L+  F  DAFV S+L  MYSKCG+V  A +VF+   +KDLV  N+
Sbjct: 144 HVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNA 203

Query: 355 MISGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADD 534
           ++SGYA QG P EA+ L+  MK  G  P++VTWNA+I+GF+Q  + EM  E+F++M  D 
Sbjct: 204 VVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDR 263

Query: 535 IEPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGK 714
           +EPDV+SWTSV+SGFVQ+F+N EAFD FK+ML  G  P++ TIS+LLPA AT A  R GK
Sbjct: 264 VEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGK 323

Query: 715 EIHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           EIHGYALV GVE+D++V S+LVDMYAKCG I EA  LF KM EKNTV
Sbjct: 324 EIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTV 370



 Score =  100 bits (248), Expect = 9e-19
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  ++  + +    +EA + F++M      P    + ++L ACA  +    G++IHG  L
Sbjct: 271 WTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYAL 330

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F     K+ V  NSMI GYA  G   EA++
Sbjct: 331 VIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIE 390

Query: 403 LLNKMKGQG-EKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L N+M+ +G  K   +T+ A +   S VG+ E+   LF+IM+    IEP +  +  +V  
Sbjct: 391 LFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDL 450

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
           F ++ +  EA+   K M    +KP  +   +LL A
Sbjct: 451 FGRAGKLEEAYGIIKSM---PVKPDLFVWGALLAA 482


>ref|XP_007016350.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508786713|gb|EOY33969.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 542

 Score =  311 bits (798), Expect = 2e-82
 Identities = 156/285 (54%), Positives = 208/285 (72%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RK+FD+IP++++SRW  +IGAY ++GYYQEA+ +F EMQ E L  N Y++P +L+AC ++
Sbjct: 79  RKLFDKIPKTNVSRWTSIIGAYCQRGYYQEAINVFSEMQAEGLGVNIYVIPRILKACGHV 138

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
            D+ TGEKIH   L+  F +DAFV SSL  MYSKCGQVEKA +VF+    KDLV  N+++
Sbjct: 139 LDQETGEKIHCSCLKKSFETDAFVTSSLIFMYSKCGQVEKAKKVFDGMFEKDLVALNALV 198

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA +G   E + L+ +MK  G +P +VTWN +IAGFS+  E  M  ++ ++M A  IE
Sbjct: 199 SGYAQKGLVEEGLRLVLEMKLMGMRPDVVTWNTLIAGFSKKDEHWMVSKVLELMLAYGIE 258

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
            DV+SWTSV+SG VQ+F+  EAF +FK+M+  G+ PS+ TISSLLPA  +  N + GKE+
Sbjct: 259 TDVVSWTSVISGLVQNFRYDEAFGSFKKMIKQGLYPSSATISSLLPACMSAVNLKLGKEV 318

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGYALV G E DI+V S+LVDMYAKCG I EA  LF KM E+NTV
Sbjct: 319 HGYALVIGAENDIYVKSALVDMYAKCGFISEARTLFYKMSERNTV 363



 Score =  118 bits (295), Expect = 3e-24
 Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 1/226 (0%)
 Frame = +1

Query: 25  QSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEK 204
           ++ +  W  +I    +   Y EA   F++M ++ L P+   + S+L AC +  +   G++
Sbjct: 258 ETDVVSWTSVISGLVQNFRYDEAFGSFKKMIKQGLYPSSATISSLLPACMSAVNLKLGKE 317

Query: 205 IHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGF 384
           +HG  L     +D +V S+L DMY+KCG + +A  +F   + ++ V WNSMI GYA  GF
Sbjct: 318 VHGYALVIGAENDIYVKSALVDMYAKCGFISEARTLFYKMSERNTVTWNSMIFGYANHGF 377

Query: 385 PREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIM-RADDIEPDVISWT 561
             EA+DL  +M+ +G+KP  +T+ AV+   S  G  E+   LF +M     I P    + 
Sbjct: 378 CEEAIDLFRQMEEEGKKPDHLTFTAVLTACSHAGLVELGQSLFNLMLEKYKITPRSEHYA 437

Query: 562 SVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVAN 699
            +V  F ++ + +EA+D  K M     +P  +   +LL A  T  N
Sbjct: 438 CLVDLFGRAGKVNEAYDVIKTM---PTEPDLFVWGALLGACRTHGN 480



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 32/129 (24%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           R +F ++ + +   W  +I  Y+  G+ +EA++LFR+M+ E  +P+     +VL AC++ 
Sbjct: 351 RTLFYKMSERNTVTWNSMIFGYANHGFCEEAIDLFRQMEEEGKKPDHLTFTAVLTACSHA 410

Query: 181 SDRPTGEKIHGLIL-RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNA-ATIKDLVIWNS 354
                G+ +  L+L ++     +   + L D++ + G+V +A+ V     T  DL +W +
Sbjct: 411 GLVELGQSLFNLMLEKYKITPRSEHYACLVDLFGRAGKVNEAYDVIKTMPTEPDLFVWGA 470

Query: 355 MISGYALQG 381
           ++      G
Sbjct: 471 LLGACRTHG 479


>ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540375|gb|EEF41946.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 547

 Score =  311 bits (796), Expect = 3e-82
 Identities = 156/285 (54%), Positives = 206/285 (72%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RK+FD+IP+ +  +  VLIGAYSR G+YQ+ L++F EMQ E LRPN++++PSVLRAC ++
Sbjct: 84  RKLFDRIPKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHV 143

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
            D  TG+ +H +ILRH F SD  V ++L DMYS+C  VEKA +VF+    KDLV  N+M+
Sbjct: 144 FDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMV 203

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
            GYA  GF +E   L+ +M+    KP+LVTWN +I+GF+Q G+  M  ELF +M     E
Sbjct: 204 LGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELFGLMSMHGFE 263

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDVISWTSV+S FVQ+  N  AF  FK+ML  G  P++ TISSLLPA A++AN R G+E+
Sbjct: 264 PDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGREL 323

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGYA   GVEEDI+V S++VDMY+KCGLI EA  LF KM E++TV
Sbjct: 324 HGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTV 368



 Score =  100 bits (248), Expect = 9e-19
 Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I  + +  + + A   F++M +    PN   + S+L ACA+L++   G ++HG   
Sbjct: 269 WTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGRELHGYAF 328

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S++ DMYSKCG + +A  +F+    +  V WNSMI GYA  G+  EA++
Sbjct: 329 AIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYCDEAIE 388

Query: 403 LLNKM-KGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L N+M K + +K   +++ AV+   S     E+   LF +M     I P +  +  ++  
Sbjct: 389 LFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQSLFLLMHEKYKIVPRLEHYACMIDL 448

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
             ++ +  EA+D  K M    ++P  +   +LL A
Sbjct: 449 LGRAGKLSEAYDMIKTM---PVEPDLFVWGALLGA 480


>ref|XP_007132042.1| hypothetical protein PHAVU_011G062000g [Phaseolus vulgaris]
           gi|561005042|gb|ESW04036.1| hypothetical protein
           PHAVU_011G062000g [Phaseolus vulgaris]
          Length = 550

 Score =  310 bits (794), Expect = 5e-82
 Identities = 157/287 (54%), Positives = 212/287 (73%), Gaps = 2/287 (0%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQR-EDLRPNE-YILPSVLRACA 174
           RK+FD+IP +++ RW+ LIG  +R G+   AL +F EMQ  + L PN  +++PSVL+AC 
Sbjct: 84  RKLFDKIPTTNVRRWIALIGTCARCGFCNLALAVFAEMQAVQGLTPNYVFVIPSVLKACG 143

Query: 175 NLSDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNS 354
           ++ DR TGEK+HGLIL+  F  D+FV S+L  MYSKC +VE A +VF+   +KD V  N+
Sbjct: 144 HVGDRITGEKMHGLILKCSFELDSFVSSALIVMYSKCAKVEDARKVFDGMVVKDTVSLNA 203

Query: 355 MISGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADD 534
           +++GY  QG   EA+ L+  MK  G K ++VTWN++I+GFSQ G+  M  E+F+ M AD 
Sbjct: 204 VVTGYVQQGAANEALSLVESMKLMGLKSNVVTWNSLISGFSQKGDQGMVSEIFRSMIADG 263

Query: 535 IEPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGK 714
           +EPDV+SWTSV+SG VQ+F+N+EAFD FK+ML  G  P++ TIS+LLPA AT A  + G+
Sbjct: 264 LEPDVVSWTSVISGLVQNFRNNEAFDAFKQMLSHGFCPTSATISTLLPACATAARVKIGR 323

Query: 715 EIHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           EIHGYALV+GVE DI+V S+LVDMYAKCG I EA+ LF +M EKNTV
Sbjct: 324 EIHGYALVTGVEGDIYVRSALVDMYAKCGFISEAKNLFSRMAEKNTV 370



 Score =  101 bits (251), Expect = 4e-19
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 2/213 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I    +     EA + F++M      P    + ++L ACA  +    G +IHG  L
Sbjct: 271 WTSVISGLVQNFRNNEAFDAFKQMLSHGFCPTSATISTLLPACATAARVKIGREIHGYAL 330

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F+    K+ V WNS+I G+A  G+ +EA++
Sbjct: 331 VTGVEGDIYVRSALVDMYAKCGFISEAKNLFSRMAEKNTVTWNSIIFGFANHGYCKEAIE 390

Query: 403 LLNKMKGQG-EKPSLVTWNAVIAGFSQVGESEMALELFQIM-RADDIEPDVISWTSVVSG 576
           L N+M+ +G  K   +T+ A +   S VG+ E+   LF+ M     IEP +  +  +V  
Sbjct: 391 LFNQMEKEGVAKLGHLTFTAALTACSHVGDIELGQSLFKTMHEKHGIEPRLEHYACMVDL 450

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLL 675
             ++ +  EA+   K M    I+P  +   +LL
Sbjct: 451 LGRAGKLDEAYCMIKTM---PIEPDLFVWGALL 480


>ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312176|gb|EFH42600.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 534

 Score =  300 bits (769), Expect = 4e-79
 Identities = 149/285 (52%), Positives = 209/285 (73%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RKVFD++P+  +S WVV+IGA +R GYYQE+L++FREM +E L+ + +I+PS+L+A  NL
Sbjct: 71  RKVFDEMPKRDISGWVVMIGACARYGYYQESLDIFREMNKEGLKLDVFIVPSLLKASRNL 130

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
            DR  G+ IH L+L+  F SDAF++SSL DMYSK G+V  A +VF+    +DLV++N+MI
Sbjct: 131 LDREFGKMIHCLVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQDLVVFNAMI 190

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA      EA++L+  MK  G KP ++TWNA+I+GFS +G  E   E+ ++M  D   
Sbjct: 191 SGYANNSQADEALNLVKDMKLLGIKPDIITWNALISGFSHMGNEEKVSEILELMCLDGYM 250

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTS++SG V +FQN +AFD FK+ML  G+ P++ TI++LLPA  T+AN + GKEI
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATITTLLPACTTLANMKHGKEI 310

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGY++V+G+E+  FV S+L+DMY KCG I EA  LF K  +K TV
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355



 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I         ++A + F++M    L PN   + ++L AC  L++   G++IHG  +
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATITTLLPACTTLANMKHGKEIHGYSV 315

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                   FV S+L DMY KCG + +A  +F     K  V +NSMI  YA  G   +A++
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLSDKAVE 375

Query: 403 LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
           L ++M+  GEK   +T+ A++   S  G +++   LF +M+    IEP +  +  +V   
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYRIEPRLEHYACMVDLL 435

Query: 580 VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
            ++ +  EA++  K M    ++P  +   +LL A
Sbjct: 436 GRAGKLVEAYEMMKTM---RMEPDLFVWGALLGA 466


>ref|XP_007208585.1| hypothetical protein PRUPE_ppa023060mg [Prunus persica]
           gi|462404227|gb|EMJ09784.1| hypothetical protein
           PRUPE_ppa023060mg [Prunus persica]
          Length = 428

 Score =  291 bits (744), Expect = 3e-76
 Identities = 143/248 (57%), Positives = 191/248 (77%)
 Frame = +1

Query: 112 MQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQ 291
           MQR+  RPN+ ++PSVL+AC +LSD  TG+KIH ++LR  F  DAFV S+L DMYSK G+
Sbjct: 1   MQRKVSRPNKIVIPSVLKACGHLSDLKTGKKIHAVVLRFSFEFDAFVSSALIDMYSKNGR 60

Query: 292 VEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAG 471
           VEKA +VF+    KD V  N+M+SG+A  G  REA+ L+ KM+  G KP+L+TWN++++G
Sbjct: 61  VEKAQQVFDMMVEKDSVALNAMVSGFAQHGLAREALRLVEKMQLLGLKPNLITWNSLVSG 120

Query: 472 FSQVGESEMALELFQIMRADDIEPDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPS 651
           FSQ G+  +A  +F +M+ + IEPDV+SWTSV+SGFVQ+FQN++AF TFK+ML  G+ P+
Sbjct: 121 FSQKGDEALAYRIFNLMQVNGIEPDVVSWTSVISGFVQNFQNNKAFHTFKQMLSHGLCPT 180

Query: 652 TYTISSLLPAYATVANSRSGKEIHGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFD 831
           + TISSLLPA A V + + GKEIH YAL  GVEED++V S+LVDMYAKCG I+EA+ LF 
Sbjct: 181 SNTISSLLPACAAVTDVKRGKEIHAYALAIGVEEDVYVRSALVDMYAKCGFIYEAKALFC 240

Query: 832 KMCEKNTV 855
           KM +KNTV
Sbjct: 241 KMSQKNTV 248



 Score =  102 bits (255), Expect = 1e-19
 Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 2/221 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I  + +     +A   F++M    L P    + S+L ACA ++D   G++IH   L
Sbjct: 149 WTSVISGFVQNFQNNKAFHTFKQMLSHGLCPTSNTISSLLPACAAVTDVKRGKEIHAYAL 208

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                 D +V S+L DMY+KCG + +A  +F   + K+ V WNSMI GYA  G+  EA++
Sbjct: 209 AIGVEEDVYVRSALVDMYAKCGFIYEAKALFCKMSQKNTVTWNSMIFGYANHGYCNEAIE 268

Query: 403 LLNKMKGQGEKP-SLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSG 576
           L N+MK + +K    +T+ AV+      G  E+   LF +M+    I P +  +  +V  
Sbjct: 269 LFNQMKMEDDKKLDYLTFMAVLTACCHAGMIELGESLFYLMQERYGIVPRLEHFACMVDL 328

Query: 577 FVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVAN 699
             ++ +  EA+D  K M    ++P  +   +LL A     N
Sbjct: 329 LGRAGKLTEAYDMIKAM---PMEPDLFVWGALLGACRNYGN 366


>ref|NP_200768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170472|sp|Q9FGR2.1|PP436_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g59600 gi|10177776|dbj|BAB11040.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|71143062|gb|AAZ23922.1| At5g59600 [Arabidopsis
           thaliana] gi|332009827|gb|AED97210.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 534

 Score =  287 bits (734), Expect = 4e-75
 Identities = 144/285 (50%), Positives = 205/285 (71%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RKVFD++P+  +S  VV+IGA +R GYYQE+L+ FREM ++ L+ + +I+PS+L+A  NL
Sbjct: 71  RKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNL 130

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
            DR  G+ IH L+L+  + SDAF++SSL DMYSK G+V  A +VF+    +DLV++N+MI
Sbjct: 131 LDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMI 190

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA      EA++L+  MK  G KP ++TWNA+I+GFS +   E   E+ ++M  D  +
Sbjct: 191 SGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYK 250

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTS++SG V +FQN +AFD FK+ML  G+ P++ TI +LLPA  T+A  + GKEI
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGY++V+G+E+  FV S+L+DMY KCG I EA  LF K  +K TV
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I         ++A + F++M    L PN   + ++L AC  L+    G++IHG  +
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                   FV S+L DMY KCG + +A  +F     K  V +NSMI  YA  G   +A++
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVE 375

Query: 403 LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
           L ++M+  GEK   +T+ A++   S  G +++   LF +M+    I P +  +  +V   
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLL 435

Query: 580 VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
            ++ +  EA++  K M    ++P  +   +LL A
Sbjct: 436 GRAGKLVEAYEMIKAM---RMEPDLFVWGALLAA 466


>ref|XP_006400940.1| hypothetical protein EUTSA_v10013206mg [Eutrema salsugineum]
           gi|557102030|gb|ESQ42393.1| hypothetical protein
           EUTSA_v10013206mg [Eutrema salsugineum]
          Length = 536

 Score =  283 bits (723), Expect = 8e-74
 Identities = 143/285 (50%), Positives = 200/285 (70%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           +K FD +P+  +S  VV+IGA +R GYYQE+L  F EM +E L+ + +++PS+L+A  NL
Sbjct: 71  KKAFDGMPKRDISGCVVMIGACARNGYYQESLGFFGEMNKEGLKLDAFMIPSLLKASRNL 130

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
            D+  G  IH ++L+  F SDAFV+SSL DMYSK G+VE A +VFN    +DL ++N+MI
Sbjct: 131 LDQEFGRMIHCMVLKCSFESDAFVVSSLIDMYSKFGEVENARKVFNDLAEQDLAVFNAMI 190

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA      EA++L+  MK  G KP ++TWNA+IAGFS +G  E   E+ +IM  D  +
Sbjct: 191 SGYANNSQSDEALNLVQDMKLLGIKPDIITWNALIAGFSHMGNEEKVSEILEIMCLDGHK 250

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTS++SG V +FQN +A D FK+ML  G+ P++ TI++LLPA  T+AN + GKEI
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKALDGFKQMLAHGLYPNSATITTLLPACTTLANVKHGKEI 310

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           H Y++V+G+E+  FV S+L+DMY KCG I EA  LF    +K TV
Sbjct: 311 HSYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRMTPKKTTV 355



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I         ++AL+ F++M    L PN   + ++L AC  L++   G++IH   +
Sbjct: 256 WTSIISGLVHNFQNEKALDGFKQMLAHGLYPNSATITTLLPACTTLANVKHGKEIHSYSV 315

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                   FV S+L DMY KCG + +A  +F     K  V +NSMI  YA  G   +A++
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEAMILFRMTPKKTTVTFNSMIFCYANHGLSDKAVE 375

Query: 403 LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
           L N+M+ +GEK   +T+ A++   S  G +++  +LF +M+    I+P +  +  +V   
Sbjct: 376 LFNQMEAKGEKLDHLTFTAILTACSHGGLTDLGQKLFLLMQNKYRIDPRLEHYACMVDLL 435

Query: 580 VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGK 714
            ++ +  EA++  K M    ++P  +   +LL A     N    K
Sbjct: 436 GRAGKLVEAYEMIKAM---PMEPDLFAWGALLGACRNHGNMELAK 477


>ref|XP_006282115.1| hypothetical protein CARUB_v10028363mg [Capsella rubella]
           gi|482550819|gb|EOA15013.1| hypothetical protein
           CARUB_v10028363mg [Capsella rubella]
          Length = 534

 Score =  276 bits (706), Expect = 7e-72
 Identities = 139/285 (48%), Positives = 200/285 (70%)
 Frame = +1

Query: 1   RKVFDQIPQSSLSRWVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANL 180
           RKVFD +P+  +S  VV+IGA +R GYYQE+L+LF+EM  E L+ + +I+PS+L+A  NL
Sbjct: 71  RKVFDGMPKRDISGCVVMIGACARNGYYQESLDLFKEMNNEGLKLDAFIVPSLLKASRNL 130

Query: 181 SDRPTGEKIHGLILRHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMI 360
                G+ +H  +L+  F SDAF++SSL DMYS  G++  A +VF+     DLV++N+MI
Sbjct: 131 LYHEFGKMVHCRVLKCSFESDAFIVSSLIDMYSNFGELGNAKKVFDDLGEHDLVVFNAMI 190

Query: 361 SGYALQGFPREAMDLLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRADDIE 540
           SGYA      EA+ L+  MK  G KP ++TWNA+++GF+  G  E   E+ ++M  +  +
Sbjct: 191 SGYANNRQSDEALSLIKDMKLLGIKPDIITWNALLSGFAHTGNEEQVSEILEMMCLEGHK 250

Query: 541 PDVISWTSVVSGFVQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPAYATVANSRSGKEI 720
           PDV+SWTS++SG V +FQN +AFD FK+ML  G+ P++ TI++LLPA  T+AN + GKEI
Sbjct: 251 PDVVSWTSIISGLVHNFQNGKAFDAFKQMLTHGLYPNSATITTLLPACTTLANVKHGKEI 310

Query: 721 HGYALVSGVEEDIFVCSSLVDMYAKCGLIFEAEKLFDKMCEKNTV 855
           HGY++V+G+E+  FV S+L+DMY KCG I EA  LF K  +K TV
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355



 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
 Frame = +1

Query: 43  WVVLIGAYSRQGYYQEALELFREMQREDLRPNEYILPSVLRACANLSDRPTGEKIHGLIL 222
           W  +I          +A + F++M    L PN   + ++L AC  L++   G++IHG  +
Sbjct: 256 WTSIISGLVHNFQNGKAFDAFKQMLTHGLYPNSATITTLLPACTTLANVKHGKEIHGYSV 315

Query: 223 RHWFNSDAFVISSLTDMYSKCGQVEKAWRVFNAATIKDLVIWNSMISGYALQGFPREAMD 402
                   FV S+L DMY KCG + +A  +F     K  V +NSM+  YA  G   +A++
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMMFCYANHGLSDKAVE 375

Query: 403 LLNKMKGQGEKPSLVTWNAVIAGFSQVGESEMALELFQIMRAD-DIEPDVISWTSVVSGF 579
           L N+M+  GEK   +T+ A++   S  G +++  +LF  M++   I P +  +  +V   
Sbjct: 376 LFNQMEDTGEKLDHLTFTAILTACSHAGLTDLGQKLFHSMQSKYRINPRLEHYACMVDLI 435

Query: 580 VQSFQNHEAFDTFKRMLGAGIKPSTYTISSLLPA 681
            ++ +  EA++  K M    ++P  +   +LL A
Sbjct: 436 GRAGKLVEAYEMIKAM---QMEPDLFVWGALLGA 466