BLASTX nr result
ID: Cocculus23_contig00013818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00013818
(1007 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 226 1e-56
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 217 7e-54
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 201 3e-49
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 200 7e-49
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 200 9e-49
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 198 3e-48
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 198 3e-48
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 198 3e-48
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 198 3e-48
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 197 4e-48
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 190 7e-46
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 189 1e-45
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 189 1e-45
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 189 2e-45
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 186 2e-44
ref|XP_002312652.1| RNA recognition motif-containing family prot... 179 1e-42
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A... 174 5e-41
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 172 3e-40
ref|XP_002315647.1| RNA recognition motif-containing family prot... 171 4e-40
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 156 1e-35
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 226 bits (575), Expect = 1e-56
Identities = 123/245 (50%), Positives = 133/245 (54%), Gaps = 2/245 (0%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGP GGP GGLMHPQ MMG+GFDPTY VNT+
Sbjct: 403 YGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTM 462
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF GHHA MW DTSMGGWG ++ RTRE
Sbjct: 463 GLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESS 522
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKE 368
GE +HE+ GRS A REK+R SERDWSGNSERRHRDEREQDWERSDK+
Sbjct: 523 YGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKD 582
Query: 367 RRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYGKRR 188
RYR+EKDGYR+HRQRE D DYGKRR
Sbjct: 583 HRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 642
Query: 187 RLPSE 173
RLPSE
Sbjct: 643 RLPSE 647
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 217 bits (552), Expect = 7e-54
Identities = 119/249 (47%), Positives = 134/249 (53%), Gaps = 6/249 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGP GGP GG+M+PQ MMGAGFDPTY VNT+
Sbjct: 382 YGQGLAGPGFGGPVGGMMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTM 441
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF GHHA MW D SMGGWG D+ RTRE
Sbjct: 442 GLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESS 501
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
GEA+HE+GGRS A RE++R SERDWSGNSERRHRDEREQDW+RS+
Sbjct: 502 YGGDDGASEYGYGEANHEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERG 561
Query: 373 --KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDY 200
+E RY++EKD YR+HRQRE D+DY
Sbjct: 562 EHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDY 621
Query: 199 GKRRRLPSE 173
GKRRRLPSE
Sbjct: 622 GKRRRLPSE 630
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 201 bits (512), Expect = 3e-49
Identities = 113/247 (45%), Positives = 131/247 (53%), Gaps = 4/247 (1%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGPA GGP G ++ PQ+MM AGFDPTY VN +
Sbjct: 398 YGQGLAGPAFGGPAGAMLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAM 457
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDGR-TREXXX 545
L GVAPHVNPAFF G +A MW DTSMGGWG + GR TRE
Sbjct: 458 GLAGVAPHVNPAFFGRGMAPNGMGMMGPSGMDGPNAGMWSDTSMGGWGEEPGRRTRESSY 517
Query: 544 XXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD--- 374
GE +HE+G RS+AA REK+R+SERDWSGNS+RRHRD+RE DW+RS+
Sbjct: 518 GGDDGASEYGYGEVNHEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREH 577
Query: 373 KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYGK 194
KE RYR+EK+ YR+HRQRE D DYGK
Sbjct: 578 KEHRYREEKESYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGK 637
Query: 193 RRRLPSE 173
RRRLPSE
Sbjct: 638 RRRLPSE 644
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 200 bits (509), Expect = 7e-49
Identities = 111/244 (45%), Positives = 128/244 (52%), Gaps = 1/244 (0%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QG+AGPA GGP GG+MH Q MMGAGFDP Y VN++
Sbjct: 348 YGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSM 407
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDGR-TREXXX 545
L GVAPHVNPAFF G + W DTSMGGWG + GR TRE
Sbjct: 408 GLAGVAPHVNPAFFARGMAPNGMGMMASSGMEGPNPGKWPDTSMGGWGEEPGRRTRESSY 467
Query: 544 XXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKER 365
GE +HE+G RS+ A REK+R SERDWSGNS+RRHRDEREQDW+RS++E
Sbjct: 468 DGDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREP 527
Query: 364 RYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYGKRRR 185
+YR+EKD YR HRQRE D+DYGKRRR
Sbjct: 528 KYREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRR 587
Query: 184 LPSE 173
PSE
Sbjct: 588 PPSE 591
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 200 bits (508), Expect = 9e-49
Identities = 113/248 (45%), Positives = 131/248 (52%), Gaps = 5/248 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QG AGP GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTL 466
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF G H MW DTSMGGWG D+ RTRE
Sbjct: 467 GLAGVAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESS 526
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
G+A+HE+G RS+ A REK+R S+R+WSGNS+RRHRDE+E+DW+RS+
Sbjct: 527 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSDREWSGNSDRRHRDEKERDWDRSERE 585
Query: 373 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYG 197
+E RYR+EKD YREHR RE D+DYG
Sbjct: 586 HREHRYREEKDSYREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYG 645
Query: 196 KRRRLPSE 173
KRRRLPSE
Sbjct: 646 KRRRLPSE 653
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 198 bits (504), Expect = 3e-48
Identities = 114/248 (45%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 409 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 467
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGW-GADDGR-TREXX 548
L GVAPHVNPAFF G H MW D+SMGGW G + GR TRE
Sbjct: 468 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESS 527
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
GEA+HE+G RSTAA REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 528 YGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 587
Query: 373 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYG 197
++ R+R+EKD YR+ RQR+ D+DYG
Sbjct: 588 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYG 647
Query: 196 KRRRLPSE 173
KRRRLPSE
Sbjct: 648 KRRRLPSE 655
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 198 bits (504), Expect = 3e-48
Identities = 114/248 (45%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 412 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 470
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGW-GADDGR-TREXX 548
L GVAPHVNPAFF G H MW D+SMGGW G + GR TRE
Sbjct: 471 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESS 530
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
GEA+HE+G RSTAA REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 531 YGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 590
Query: 373 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYG 197
++ R+R+EKD YR+ RQR+ D+DYG
Sbjct: 591 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYG 650
Query: 196 KRRRLPSE 173
KRRRLPSE
Sbjct: 651 KRRRLPSE 658
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 198 bits (504), Expect = 3e-48
Identities = 114/248 (45%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 412 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 470
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGW-GADDGR-TREXX 548
L GVAPHVNPAFF G H MW D+SMGGW G + GR TRE
Sbjct: 471 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESS 530
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
GEA+HE+G RSTAA REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 531 YGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 590
Query: 373 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYG 197
++ R+R+EKD YR+ RQR+ D+DYG
Sbjct: 591 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYG 650
Query: 196 KRRRLPSE 173
KRRRLPSE
Sbjct: 651 KRRRLPSE 658
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 198 bits (503), Expect = 3e-48
Identities = 114/248 (45%), Positives = 131/248 (52%), Gaps = 5/248 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 409 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 467
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGW-GADDGR-TREXX 548
L GVAPHVNPAFF G H MW D+SMGGW G + GR TRE
Sbjct: 468 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESS 527
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
GEASHE+G RST A REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 528 YGGDDGASDYGYGEASHEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 587
Query: 373 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYG 197
++ R+R+EKD YR+ RQR+ D+DYG
Sbjct: 588 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYG 647
Query: 196 KRRRLPSE 173
KRRRLPSE
Sbjct: 648 KRRRLPSE 655
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 197 bits (502), Expect = 4e-48
Identities = 114/248 (45%), Positives = 131/248 (52%), Gaps = 5/248 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF G HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
G+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 373 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYG 197
+E RYR+EKD YREHR RE D+DYG
Sbjct: 585 HREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYG 644
Query: 196 KRRRLPSE 173
K+RRLPSE
Sbjct: 645 KKRRLPSE 652
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 190 bits (483), Expect = 7e-46
Identities = 106/245 (43%), Positives = 125/245 (51%), Gaps = 2/245 (0%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
+ QGLAGPA GGP GLMHPQ MMG GFDP++ VN +
Sbjct: 404 FGQGLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPM 463
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF G H MW DTS GGWG ++ RTRE
Sbjct: 464 GLPGVAPHVNPAFFGRGMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESS 523
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKE 368
GE SH++G RS+A REK+R SERDWSGNS++RHRDERE D +R DKE
Sbjct: 524 YGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKE 583
Query: 367 RRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYGKRR 188
RYR+E+DGYR++RQ+E D +YGKRR
Sbjct: 584 HRYREERDGYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRR 643
Query: 187 RLPSE 173
R PSE
Sbjct: 644 RAPSE 648
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 189 bits (481), Expect = 1e-45
Identities = 103/200 (51%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF G HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
G+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 373 -KERRYRDEKDGYREHRQRE 317
+E RYR+EKD YREHR RE
Sbjct: 585 HREHRYREEKDSYREHRHRE 604
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 189 bits (481), Expect = 1e-45
Identities = 103/200 (51%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF G HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
G+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 373 -KERRYRDEKDGYREHRQRE 317
+E RYR+EKD YREHR RE
Sbjct: 585 HREHRYREEKDSYREHRHRE 604
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 189 bits (480), Expect = 2e-45
Identities = 108/249 (43%), Positives = 127/249 (51%), Gaps = 6/249 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGL GP GGP GG+M+ MMG GFDPTY GVN +
Sbjct: 398 YGQGLGGPGFGGPVGGMMNAPGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAM 457
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGAD--DGRTREXX 548
L GVAPHVNPAFF GHHA MW D SM GW + D RTRE
Sbjct: 458 GLAGVAPHVNPAFFGRGMATNGMGMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESS 517
Query: 547 XXXXXXXXXXXXG-EASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDK 371
EA+HE+ RS+AAPRE++R SER+W+G SERRHRDEREQDW+RS++
Sbjct: 518 YGGDDGGSEYGNYGEANHEKPVRSSAAPRERERESEREWTGTSERRHRDEREQDWDRSER 577
Query: 370 ER---RYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDY 200
E RY++EKD YR+HR+RE D+DY
Sbjct: 578 EHREPRYKEEKDSYRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDY 637
Query: 199 GKRRRLPSE 173
GKRRRLPSE
Sbjct: 638 GKRRRLPSE 646
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 186 bits (471), Expect = 2e-44
Identities = 101/197 (51%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDG--RTREXX 548
L GVAPHVNPAFF G HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 374
G+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 373 -KERRYRDEKDGYREHR 326
+E RYR+EKD YREHR
Sbjct: 585 HREHRYREEKDSYREHR 601
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 179 bits (455), Expect = 1e-42
Identities = 103/243 (42%), Positives = 120/243 (49%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGPA GGP GG+M PQ MMGAGFDP Y VN++
Sbjct: 393 YGQGLAGPAFGGPAGGMMPPQGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSM 452
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDGRTREXXXX 542
L GVAPHVNPAFF G + MW + G GA +
Sbjct: 453 GLAGVAPHVNPAFFARGMAPNGMGMMVSSGMDGPNPGMWESSYDGDEGASE--------- 503
Query: 541 XXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKERR 362
GE +HE+G RS+ A REK+R SERDWSGNS+RRHRDEREQDW+R ++E R
Sbjct: 504 -------YGYGEGNHEKGARSSGASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHR 556
Query: 361 YRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYGKRRRL 182
Y++EKD YR HRQRE D+DYGKRRRL
Sbjct: 557 YKEEKDSYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRL 616
Query: 181 PSE 173
PSE
Sbjct: 617 PSE 619
>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
gi|548855834|gb|ERN13697.1| hypothetical protein
AMTR_s00049p00146760 [Amborella trichopoda]
Length = 659
Score = 174 bits (441), Expect = 5e-41
Identities = 102/250 (40%), Positives = 120/250 (48%), Gaps = 7/250 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXG---V 731
Y Q L+ P +GGP GGL+HPQ MMG+GFDPTY +
Sbjct: 413 YGQALSAPPLGGPPGGLLHPQGMMGSGFDPTYGAHLGRGSGYGGFSGPHFPGMLPSFSPM 472
Query: 730 NTVALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGG---WGADD-GR 563
TV L GVAPHVNPAFF GHH MWGD+SMGG WG ++ GR
Sbjct: 473 GTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGAMDGHHGGMWGDSSMGGGVGWGNEEHGR 532
Query: 562 TREXXXXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWE 383
G+ HERGG + REKDR SERDWS ERRHRD+R+ DW
Sbjct: 533 RTRESSYGDDGASDYGYGDGGHERGGGRSNPGREKDRGSERDWSSGPERRHRDDRDSDW- 591
Query: 382 RSDKERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLD 203
D++ RY+DEKDGY +HRQRE D+D
Sbjct: 592 --DRDPRYKDEKDGYSDHRQRERDWDNEDDWDRGRTSSRSRSKSRMMQEEDQRSRSKDVD 649
Query: 202 YGKRRRLPSE 173
YGKRRR+PSE
Sbjct: 650 YGKRRRVPSE 659
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 172 bits (435), Expect = 3e-40
Identities = 100/248 (40%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGLAGP GGP GG+M+PQ MMG GFDPTY VNT+
Sbjct: 397 YGQGLAGPPFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTM 456
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADD--GRTREXX 548
VAPHVNPAFF GH MW D S+GGWG ++ RTRE
Sbjct: 457 GFAAVAPHVNPAFFGRGMTNNGMGMVGSSLMDGHQGGMWNDPSIGGWGGEEHGRRTRESS 516
Query: 547 XXXXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKE 368
G+ +HE+GGR +R SERDWSGNSERR+ +ER+QDW+RS KE
Sbjct: 517 YGGDDGASEYGYGDTNHEKGGR--------ERGSERDWSGNSERRNHEERDQDWDRSQKE 568
Query: 367 R---RYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYG 197
+ RYR+ KDG R++R +E D+DYG
Sbjct: 569 QKEHRYREGKDGSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYG 628
Query: 196 KRRRLPSE 173
KRRRLPSE
Sbjct: 629 KRRRLPSE 636
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 171 bits (433), Expect = 4e-40
Identities = 102/243 (41%), Positives = 119/243 (48%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QG+AGPA GGP GG+MH Q MMGAGFDP Y VN++
Sbjct: 348 YGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSM 407
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDGRTREXXXX 542
L GVAPHVNPAFF M S G G + G+ E
Sbjct: 408 GLAGVAPHVNPAFFARGMAPNG---------------MGMMASSGMEGPNPGK--ESSYD 450
Query: 541 XXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKERR 362
GE +HE+G RS+ A REK+R SERDWSGNS+RRHRDEREQDW+RS++E +
Sbjct: 451 GDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPK 510
Query: 361 YRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYGKRRRL 182
YR+EKD YR HRQRE D+DYGKRRR
Sbjct: 511 YREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRP 570
Query: 181 PSE 173
PSE
Sbjct: 571 PSE 573
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 156 bits (395), Expect = 1e-35
Identities = 96/243 (39%), Positives = 120/243 (49%)
Frame = -2
Query: 901 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXGVNTV 722
Y QGL GP GGP G +MHPQ MMG GFD + GVN++
Sbjct: 403 YGQGLNGPGFGGPPG-MMHPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSM 461
Query: 721 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHHAVMWGDTSMGGWGADDGRTREXXXX 542
L GVAPHVNPAFF G H+ MW D +MGGWG ++ RE
Sbjct: 462 GLPGVAPHVNPAFFGRGMNPNGMGMMGNPGMVGPHSGMWNDPNMGGWGGEE-HGRESSYG 520
Query: 541 XXXXXXXXXXGEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKERR 362
GE SH++ RS+AAPREK+R+SER++ ER+HR+ERE D ER+D++ +
Sbjct: 521 GEDNASEYGYGEGSHDKSVRSSAAPREKERTSEREYP---ERKHREERENDGERNDRDSK 577
Query: 361 YRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDYGKRRRL 182
YR+EKD YREHR +E D DYGKRRR+
Sbjct: 578 YREEKDRYREHRHKE-RESGYDDDWDRGQSSRSRSRSGAVQEEDHRSRSRDADYGKRRRM 636
Query: 181 PSE 173
PSE
Sbjct: 637 PSE 639