BLASTX nr result
ID: Cocculus23_contig00013665
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00013665
(440 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part... 114 1e-23
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part... 112 4e-23
ref|XP_004305946.1| PREDICTED: uncharacterized protein LOC101303... 112 5e-23
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun... 112 5e-23
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part... 112 5e-23
ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, part... 110 2e-22
gb|ABD63133.1| hypothetical protein 19.t00005 [Asparagus officin... 104 1e-20
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 96 4e-18
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 96 5e-18
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 96 5e-18
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 96 5e-18
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 96 5e-18
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 96 5e-18
ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759... 96 7e-18
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 95 1e-17
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 94 2e-17
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 94 2e-17
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 94 2e-17
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 94 2e-17
gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subc... 94 2e-17
>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
gi|462421192|gb|EMJ25455.1| hypothetical protein
PRUPE_ppa018408mg, partial [Prunus persica]
Length = 1440
Score = 114 bits (286), Expect = 1e-23
Identities = 48/73 (65%), Positives = 66/73 (90%)
Frame = -3
Query: 222 VKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDWR 43
++L+ D+ +PN+GLY+ S+ ESDE+K+Q+Q LL++G+I+PSCSP GSP++LVPKKDG WR
Sbjct: 577 IQLVGDSPLPNLGLYRTSLMESDEIKKQIQGLLEQGVIKPSCSPCGSPVLLVPKKDGGWR 636
Query: 42 MCIDYRALNKITI 4
MC+DYRALNKITI
Sbjct: 637 MCVDYRALNKITI 649
>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
gi|462423886|gb|EMJ28149.1| hypothetical protein
PRUPE_ppa025194mg, partial [Prunus persica]
Length = 1347
Score = 112 bits (281), Expect = 4e-23
Identities = 47/73 (64%), Positives = 65/73 (89%)
Frame = -3
Query: 222 VKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDWR 43
++L+ D+ +PN+GLY+ S+ ESDE+K+Q+Q LL++G+I+PSCSP GSP++LVPKKDG W
Sbjct: 504 IQLVGDSPLPNLGLYRTSLMESDEIKKQIQGLLEQGIIKPSCSPCGSPVLLVPKKDGGWS 563
Query: 42 MCIDYRALNKITI 4
MC+DYRALNKITI
Sbjct: 564 MCVDYRALNKITI 576
>ref|XP_004305946.1| PREDICTED: uncharacterized protein LOC101303732 [Fragaria vesca
subsp. vesca]
Length = 458
Score = 112 bits (280), Expect = 5e-23
Identities = 48/73 (65%), Positives = 64/73 (87%)
Frame = -3
Query: 222 VKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDWR 43
+ L ++S+PN GLY+ +++ES+E+KRQVQELLDKG+I PSCSP GS ++LVPKKDG WR
Sbjct: 384 IMLTGESSLPNTGLYRTTVQESEEIKRQVQELLDKGVIVPSCSPCGSAVLLVPKKDGGWR 443
Query: 42 MCIDYRALNKITI 4
MC+DYRALN+IT+
Sbjct: 444 MCVDYRALNRITV 456
>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
gi|462415599|gb|EMJ20336.1| hypothetical protein
PRUPE_ppa015965mg [Prunus persica]
Length = 1484
Score = 112 bits (280), Expect = 5e-23
Identities = 47/68 (69%), Positives = 62/68 (91%)
Frame = -3
Query: 207 DASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDWRMCIDY 28
D+ +PN+GLY+ S+ ESDE+K+Q+Q LL++G+I+PSCSP GSP++LVPKKDG WRMC+DY
Sbjct: 595 DSPLPNLGLYRTSLMESDEIKKQIQGLLEQGIIKPSCSPCGSPVLLVPKKDGGWRMCVDY 654
Query: 27 RALNKITI 4
RALNKITI
Sbjct: 655 RALNKITI 662
>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
gi|462398849|gb|EMJ04517.1| hypothetical protein
PRUPE_ppa019964mg, partial [Prunus persica]
Length = 1488
Score = 112 bits (280), Expect = 5e-23
Identities = 47/73 (64%), Positives = 65/73 (89%)
Frame = -3
Query: 222 VKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDWR 43
++L+ D+ +PN+GLY+ S+ ESDE+K+Q+Q LL++G+I+PSCSP GSP++LVPKKDG W
Sbjct: 577 LQLVGDSHLPNLGLYRTSLMESDEIKKQIQGLLEQGIIKPSCSPCGSPVLLVPKKDGGWH 636
Query: 42 MCIDYRALNKITI 4
MC+DYRALNKITI
Sbjct: 637 MCVDYRALNKITI 649
>ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, partial [Prunus persica]
gi|462415551|gb|EMJ20288.1| hypothetical protein
PRUPE_ppa015100mg, partial [Prunus persica]
Length = 641
Score = 110 bits (275), Expect = 2e-22
Identities = 47/73 (64%), Positives = 65/73 (89%)
Frame = -3
Query: 222 VKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDWR 43
++L+ D+ +PN+GLY+ S+ ESDE+K+Q+Q LL++G+I+PSCSP GSP++LVPKKDG WR
Sbjct: 151 IQLVGDSPLPNLGLYRTSLMESDEIKKQIQGLLEQGVIKPSCSPCGSPVLLVPKKDGGWR 210
Query: 42 MCIDYRALNKITI 4
M +DYRALNKITI
Sbjct: 211 MYVDYRALNKITI 223
>gb|ABD63133.1| hypothetical protein 19.t00005 [Asparagus officinalis]
Length = 335
Score = 104 bits (259), Expect = 1e-20
Identities = 47/71 (66%), Positives = 61/71 (85%)
Frame = -3
Query: 216 LMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDWRMC 37
L ++S+PNIGLY+ S++ES+E+K+QVQELL+ G+I PSCSP GS ++LV KKDG W MC
Sbjct: 2 LTDESSLPNIGLYRTSVQESEEIKKQVQELLEMGVIVPSCSPCGSSVLLVLKKDGGWLMC 61
Query: 36 IDYRALNKITI 4
+DYRALNKITI
Sbjct: 62 MDYRALNKITI 72
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 270 PIKF*QHQKLHLQVLRVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSP 91
PI+ +HQ + L+P AS+PN Y+ + EE+ E++RQVQELLDKG +R S SP
Sbjct: 705 PIRGIEHQ--------IDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSP 756
Query: 90 AGSPIVLVPKKDGDWRMCIDYRALNKITI 4
P++LVPKKDG WRMC+D RA+N ITI
Sbjct: 757 CAVPVILVPKKDGTWRMCVDCRAINNITI 785
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 270 PIKF*QHQKLHLQVLRVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSP 91
PI+ +HQ + L+P AS+PN Y+ + EE+ E++RQVQELLDKG +R S SP
Sbjct: 730 PIRGIEHQ--------IDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSP 781
Query: 90 AGSPIVLVPKKDGDWRMCIDYRALNKITI 4
P++LVPKKDG WRMC+D RA+N ITI
Sbjct: 782 CSVPVLLVPKKDGSWRMCVDCRAINNITI 810
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 270 PIKF*QHQKLHLQVLRVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSP 91
PI+ +HQ + L+P AS+PN Y+ + EE+ E++RQVQELLDKG +R S SP
Sbjct: 730 PIRGIEHQ--------IDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSP 781
Query: 90 AGSPIVLVPKKDGDWRMCIDYRALNKITI 4
P++LVPKKDG WRMC+D RA+N ITI
Sbjct: 782 CSIPVLLVPKKDGSWRMCVDCRAINNITI 810
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 270 PIKF*QHQKLHLQVLRVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSP 91
PI+ +HQ + L+P AS+PN Y+ + EE+ E++RQVQELLDKG +R S SP
Sbjct: 626 PIRGIEHQ--------IDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSP 677
Query: 90 AGSPIVLVPKKDGDWRMCIDYRALNKITI 4
P++LVPKKDG WRMC+D RA+N ITI
Sbjct: 678 CSVPVLLVPKKDGSWRMCVDCRAINNITI 706
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 270 PIKF*QHQKLHLQVLRVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSP 91
PI+ +HQ + L+P AS+PN Y+ + EE+ E++RQVQELLDKG +R S SP
Sbjct: 730 PIRGIEHQ--------IDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSP 781
Query: 90 AGSPIVLVPKKDGDWRMCIDYRALNKITI 4
P++LVPKKDG WRMC+D RA+N ITI
Sbjct: 782 CSVPVLLVPKKDGSWRMCVDCRAINNITI 810
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = -3
Query: 270 PIKF*QHQKLHLQVLRVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSP 91
PI+ +HQ + L+P AS+PN Y+ + EE+ E++RQVQELLDKG +R S SP
Sbjct: 508 PIRGIEHQ--------IDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSP 559
Query: 90 AGSPIVLVPKKDGDWRMCIDYRALNKITI 4
P++LVPKKDG WRMC+D RA+N ITI
Sbjct: 560 CAVPVLLVPKKDGSWRMCVDCRAINNITI 588
>ref|XP_004980298.1| PREDICTED: uncharacterized protein LOC101759439 [Setaria italica]
Length = 696
Score = 95.5 bits (236), Expect = 7e-18
Identities = 43/74 (58%), Positives = 57/74 (77%)
Frame = -3
Query: 225 RVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDW 46
++ L+P AS+PN Y+ + EE+ E++RQVQELLDKG +R S SP P++LVPKKDG W
Sbjct: 344 QIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSW 403
Query: 45 RMCIDYRALNKITI 4
RMC+D RA+N ITI
Sbjct: 404 RMCVDCRAINNITI 417
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = -3
Query: 270 PIKF*QHQKLHLQVLRVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSP 91
PI+ +HQ + L+P AS+PN Y+ + EE+ E++RQ+QELLDKG +R S SP
Sbjct: 363 PIRGIEHQ--------IDLIPGASLPNRAPYRTNPEETKEIQRQMQELLDKGYVRESLSP 414
Query: 90 AGSPIVLVPKKDGDWRMCIDYRALNKITI 4
P++LVPKKDG WRMC+D RA+N ITI
Sbjct: 415 CSVPVLLVPKKDGSWRMCVDCRAINNITI 443
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -3
Query: 225 RVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDW 46
++ L+P AS+PN Y+ + EE+ E++RQV ELLDKG +R S SP P++LVPKKDG W
Sbjct: 1042 QIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSW 1101
Query: 45 RMCIDYRALNKITI 4
RMC+D RA+N ITI
Sbjct: 1102 RMCVDCRAINNITI 1115
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -3
Query: 225 RVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDW 46
++ L+P AS+PN Y+ + EE+ E++RQV ELLDKG +R S SP P++LVPKKDG W
Sbjct: 709 QIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSW 768
Query: 45 RMCIDYRALNKITI 4
RMC+D RA+N ITI
Sbjct: 769 RMCVDCRAINNITI 782
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -3
Query: 225 RVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDW 46
++ L+P AS+PN Y+ + EE+ E++RQV ELLDKG +R S SP P++LVPKKDG W
Sbjct: 1051 QIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSW 1110
Query: 45 RMCIDYRALNKITI 4
RMC+D RA+N ITI
Sbjct: 1111 RMCVDCRAINNITI 1124
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = -3
Query: 225 RVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDW 46
++ L+P AS+PN Y+ + EE+ E++RQV ELLDKG +R S SP P++LVPKKDG W
Sbjct: 688 QIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSW 747
Query: 45 RMCIDYRALNKITI 4
RMC+D RA+N ITI
Sbjct: 748 RMCVDCRAINNITI 761
>gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 94.0 bits (232), Expect = 2e-17
Identities = 41/74 (55%), Positives = 57/74 (77%)
Frame = -3
Query: 225 RVKLMPDASVPNIGLYQQSIEESDEVKRQVQELLDKGLIRPSCSPAGSPIVLVPKKDGDW 46
++ L+P AS+PN Y+ + EE+ E++RQVQ+LLD+ +R S SP P++LVPKKDG W
Sbjct: 558 QIDLIPGASLPNRAAYRTNPEETKEIQRQVQDLLDRWYVRQSLSPCVVPVILVPKKDGSW 617
Query: 45 RMCIDYRALNKITI 4
RMC+DYRA+N ITI
Sbjct: 618 RMCVDYRAINNITI 631