BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00013617
         (3724 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1914   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1884   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1883   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1877   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1863   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1849   0.0  
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...  1845   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1842   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1811   0.0  
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...  1791   0.0  
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...  1781   0.0  
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas...  1770   0.0  
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...  1769   0.0  
ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr...  1762   0.0  
ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III s...  1755   0.0  
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...  1754   0.0  
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s...  1750   0.0  
ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps...  1749   0.0  
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...  1746   0.0  
ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III s...  1739   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1914 bits (4957), Expect = 0.0
 Identities = 943/1143 (82%), Positives = 1034/1143 (90%), Gaps = 3/1143 (0%)
 Frame = +3

Query: 141  LREDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNII 320
            +R  SI + F   P K AVDKF LLPEFLKVRGLVKQHLDSFNYFV T I+KIVRAN+ I
Sbjct: 1    MRRMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRI 60

Query: 321  TSSIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNV 500
             SS+DP IYL++ DVRIG+P++T+D ++ +L+P  CRL+D TY+APILVNIEY  GSH  
Sbjct: 61   VSSVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQ 120

Query: 501  LTVATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQE 680
             T   K DV IGR+PIMLRSCCCVL  +DEAELARLGECPLDPGGYFVVKGTEKVILIQE
Sbjct: 121  KTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQE 180

Query: 681  QLSKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMK 860
            QLSKNRIIID D KG + ASVTSSTE+ KSKTV + EKEKI + LNQF    +PIM++MK
Sbjct: 181  QLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSK-IPIMIVMK 239

Query: 861  AMGMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASL 1040
            AMGMESDQEVVQM+GR+PRY ALLLPS++ECA+  +YTQQQALEF+E+KVK+  F N SL
Sbjct: 240  AMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSL 299

Query: 1041 EKEGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRL 1220
            EKEGR ++I+RD F+ANVPVR+ +FRPKC+YVAV+LRRMMDAILNKDA+DDKDYVGNKRL
Sbjct: 300  EKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRL 359

Query: 1221 ELSGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL---ARDIITHGLERA 1391
            ELSGQ ISLLFEDLFKTM SEVKK ID +L K SRS   D SQ L    RD IT GLER 
Sbjct: 360  ELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERT 419

Query: 1392 ISTGNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGM 1571
            +STGNWDVKRFRMHRKGM+QVVARLS+I ++GHMTKISPQFEKSRKVSGPRALQPSQWGM
Sbjct: 420  LSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGM 479

Query: 1572 LCPCDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFL 1751
            LCPCDTPEGEACGLVKNLALMTHVTTDEE+ PLISLC+SLGVEDLELLSGEELH PNSFL
Sbjct: 480  LCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFL 539

Query: 1752 VMFNGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVI 1931
            ++FNGLILGKHRRPQ FANA+RKLRRAGKIGEFVSVFVNEKQ C+YIASDGGRVCRP+VI
Sbjct: 540  IIFNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVI 599

Query: 1932 ADKGISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIE 2111
            ADKG SR+KEHHMKEL  G+RTF+DFL +GLIEYLDVNE+NNALIALYE +A PETTHIE
Sbjct: 600  ADKGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIE 659

Query: 2112 IEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRP 2291
            IEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRP
Sbjct: 660  IEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRP 719

Query: 2292 LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAI 2471
            LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +A+
Sbjct: 720  LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAV 779

Query: 2472 NQKYANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVR 2651
            NQ+Y NN  DRI+RP +VG +AERMQILDDDGLAAPGEII+P+DIYINK+SP   +  + 
Sbjct: 780  NQRYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLI 839

Query: 2652 SPAGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSS 2831
            SP GLPDSAYK + QT+KGP+GE +VVDRVAL SDK++NLCIKFLIRHTRRPE+GDKFSS
Sbjct: 840  SPVGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSS 899

Query: 2832 RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFH 3011
            RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFH
Sbjct: 900  RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 959

Query: 3012 YGSAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKH 3191
            YGSAFGEPSGHAD+VE IS+TLVKHGFSYSGKDFIYSGITG PLQAYIFMGPIYYQKLKH
Sbjct: 960  YGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 1019

Query: 3192 MVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDP 3371
            MVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDP
Sbjct: 1020 MVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDP 1079

Query: 3372 FEVQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKL 3551
            FEVQVCR CGLLGYYNHKLK G+CSTCKNGDNISTMKLPYACKLLFQELQ+MNVVPRLKL
Sbjct: 1080 FEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKL 1139

Query: 3552 TEA 3560
            TEA
Sbjct: 1140 TEA 1142


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1884 bits (4881), Expect = 0.0
 Identities = 925/1134 (81%), Positives = 1024/1134 (90%)
 Frame = +3

Query: 159  DEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITSSIDP 338
            D+Q L +P KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRAN+ I S IDP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 339  RIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLTVATK 518
             I+L++ DVRIG+P++T+D V+ +L+P  CRL+D TY+APILVNIEY +GSH   T   K
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 519  KDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 698
             DV IGR+PIMLRSC CVL  +DEAELARLGECPLDPGGYF++KGTEKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 699  IIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAMGMES 878
            +IID D KG + ASVTSSTE +KSKTV   EK K+ + LNQF K  +PIMV+MKAMG+ES
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKK-IPIMVVMKAMGIES 255

Query: 879  DQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEKEGRA 1058
            DQEVVQM+GRDPRY ALLLPSI+ECA  ++YTQ++ALE++E KVKR +F +   ++EGRA
Sbjct: 256  DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRA 315

Query: 1059 LSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLELSGQH 1238
             SI+RDVFLANVPV   +FRPKC YVAV+LRRM++A+LNKDA+DDKDYVGNKRLELSGQ 
Sbjct: 316  FSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 1239 ISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWDVK 1418
            +SLLFEDLFKTM SEV+K +D +L K SRS   D SQ + RD IT GLER +STGN+DVK
Sbjct: 376  VSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVK 435

Query: 1419 RFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 1598
            RF+MHRKGMTQV+ARLSFI T+GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 436  RFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 495

Query: 1599 EACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNGLILG 1778
            EACGLVKNLALMTHVTTDEE+GPLISLC+ LGVEDLELLSGEELH PNSFLV+FNGLILG
Sbjct: 496  EACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILG 555

Query: 1779 KHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGISRVK 1958
            KHRRP+ FA+ +RKLRRAGKIGEFVSVFVNEKQRC+YIASDGGRVCRPLVIADKGISR+K
Sbjct: 556  KHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIK 615

Query: 1959 EHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPFTILGV 2138
            EHHMKEL  G+R+F+DFL EGLIEYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILGV
Sbjct: 616  EHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGV 675

Query: 2139 CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIEL 2318
             AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMDSLLYLLVYPQRPLLTTRTIEL
Sbjct: 676  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIEL 735

Query: 2319 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKYANNTM 2498
            VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK TAINQKYAN+T 
Sbjct: 736  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTS 795

Query: 2499 DRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPAGLPDSA 2678
            DRI+RP R G  AERMQILDDDGLAAPGEII+P+D+YINK+SP     ++ SP G  DS 
Sbjct: 796  DRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSR 855

Query: 2679 YKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 2858
            Y+SA QTYKGP GET VVDRVAL SDK+ +LCIKFLIRHTRRPELGDKFSSRHGQKGVCG
Sbjct: 856  YRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 915

Query: 2859 TIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPS 3038
            TI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPS
Sbjct: 916  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 975

Query: 3039 GHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHAR 3218
            GHAD VE ISETLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 976  GHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1035

Query: 3219 ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRAC 3398
              GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVCR C
Sbjct: 1036 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 1095

Query: 3399 GLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            GLLGYYNHKLKAG+CSTCKNGDNIS+MKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1096 GLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1884 bits (4879), Expect = 0.0
 Identities = 924/1134 (81%), Positives = 1024/1134 (90%)
 Frame = +3

Query: 159  DEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITSSIDP 338
            D+Q L +P KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRAN+ I S IDP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 339  RIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLTVATK 518
             I+L++ DVRIG+P++T+D V+ +L+P  CRL+D TY+APILVNIEY +GSH   T   K
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 519  KDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 698
             DV IGR+PIMLRSC CVL  +DEAELARLGECPLDPGGYF++KGTEKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 699  IIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAMGMES 878
            +IID D KG + ASVTSSTE +KSKTV   EK K+ + LNQF K  +PIMV+MKAMGMES
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKK-IPIMVVMKAMGMES 255

Query: 879  DQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEKEGRA 1058
            DQEVVQM+GRDPRY ALLLPSI+ECA  ++YTQ++ALE++E KVKR +F +   ++EGRA
Sbjct: 256  DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRA 315

Query: 1059 LSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLELSGQH 1238
             SI+RDVFLANVPV   +FRPKC YVAV+LRRM++A+LNKDA+DDKDYVGNKRLELSGQ 
Sbjct: 316  FSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 1239 ISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWDVK 1418
            +SLLFEDLFKTM SEV+K +D +L K SRS   D SQ + RD IT GLER +STGN+DVK
Sbjct: 376  VSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVK 435

Query: 1419 RFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 1598
            RF+MHRKGMTQV+ARLSFI T+GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 436  RFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 495

Query: 1599 EACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNGLILG 1778
            EACGLVKNLALMTHVTTDEE+GPLISLC+ LGVEDLELLSGEELH PNSFLV+FNGLILG
Sbjct: 496  EACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILG 555

Query: 1779 KHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGISRVK 1958
            KHRRP+ FA+ +RKLRRAGKIGEFVSVFVNEKQRC+YIASDGGRVCRPLVIADKGISR+K
Sbjct: 556  KHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIK 615

Query: 1959 EHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPFTILGV 2138
            EHHMKEL  G+R+F+DFL EGLIEYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILGV
Sbjct: 616  EHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGV 675

Query: 2139 CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIEL 2318
             AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMDSLLYLLVYPQRPLLTTRTIEL
Sbjct: 676  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIEL 735

Query: 2319 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKYANNTM 2498
            VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK TAINQKYAN+T 
Sbjct: 736  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTS 795

Query: 2499 DRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPAGLPDSA 2678
            DRI+RP R G  +ERMQILDDDGLAAPGEII+P+D+YINK+SP     ++ SP G  DS 
Sbjct: 796  DRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSR 855

Query: 2679 YKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 2858
            Y+SA QTYKGP GET VVDRVAL SDK+ +LCIKFLIRHTRRPELGDKFSSRHGQKGVCG
Sbjct: 856  YRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 915

Query: 2859 TIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPS 3038
            TI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPS
Sbjct: 916  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 975

Query: 3039 GHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHAR 3218
            GHAD VE ISETLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 976  GHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1035

Query: 3219 ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRAC 3398
              GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVCR C
Sbjct: 1036 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 1095

Query: 3399 GLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            GLLGYYNHKLKAG+CSTCKNG+NIS+MKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1096 GLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1877 bits (4862), Expect = 0.0
 Identities = 925/1139 (81%), Positives = 1027/1139 (90%), Gaps = 1/1139 (0%)
 Frame = +3

Query: 147  EDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITS 326
            E  +D+Q L +P KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIVRAN+ I S
Sbjct: 21   EMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVS 80

Query: 327  SIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
             +DP IYL++ DVRIG+P++TI+ V+ +++P  CRL+D TY+API VNIEY +GSH   T
Sbjct: 81   GVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKT 140

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
               K D+ IGR+PIMLRSCCCVL  +DEAELARLGECPLDPGGYFV+KG EKVILIQEQL
Sbjct: 141  RLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQL 200

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASVTSS+EA KSKTV   EKEKI + LNQF K  +PIMV+MKAM
Sbjct: 201  SKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKK-IPIMVVMKAM 259

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEK 1046
            GMESDQEVVQM+GRDP Y A+LLPSI+ECA   +YTQ+QALE++E KVKR  ++  + EK
Sbjct: 260  GMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEK 319

Query: 1047 EGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLEL 1226
            EGRALSI+RDVFLANVPVR  +FRPKC+YVAV+LRRM++AILNKDA+DDKDYVGNKRLEL
Sbjct: 320  EGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLEL 379

Query: 1227 SGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTG 1403
            SGQ ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STG
Sbjct: 380  SGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTG 439

Query: 1404 NWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 1583
            N+D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 440  NFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPC 499

Query: 1584 DTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFN 1763
            DTPEGEACGLVKNLALMTHVTTDE++GPLISLC+ LGVEDLELLSGEELH PNSFLV+ N
Sbjct: 500  DTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILN 559

Query: 1764 GLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKG 1943
            GLILGKHRRPQ FA A+RKLRRAGK+GEFVSVFVNEKQRC+YIASDGGRVCRPLVIADKG
Sbjct: 560  GLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKG 619

Query: 1944 ISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPF 2123
            +SR+KEHHMKEL  G+RTF+DFL +GLIEYLDVNE+NNALIALYEGEA PETTHIEIEPF
Sbjct: 620  VSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPF 679

Query: 2124 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTT 2303
            TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+LLYLLVYPQRPLLTT
Sbjct: 680  TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 739

Query: 2304 RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKY 2483
            RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ +A+NQKY
Sbjct: 740  RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKY 799

Query: 2484 ANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPAG 2663
                 DRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DIYINK+S  +   +  S   
Sbjct: 800  ETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVSSES 859

Query: 2664 LPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQ 2843
            LPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL IKFLIRHTRRPE+GDKFSSRHGQ
Sbjct: 860  LPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQ 919

Query: 2844 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSA 3023
            KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSA
Sbjct: 920  KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 979

Query: 3024 FGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLD 3203
            FGEPSGHADRVE ISETL+KHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLD
Sbjct: 980  FGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1039

Query: 3204 KMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQ 3383
            KMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEVQ
Sbjct: 1040 KMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQ 1099

Query: 3384 VCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            VCR CGLLGYY+HKLK G+CS+CKNGDN+STMKLPYACKLL QELQSMN+VPRLKL+EA
Sbjct: 1100 VCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1158


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1863 bits (4825), Expect = 0.0
 Identities = 920/1139 (80%), Positives = 1022/1139 (89%), Gaps = 1/1139 (0%)
 Frame = +3

Query: 147  EDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITS 326
            E  +D+Q L +P KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIVRAN+ I S
Sbjct: 21   EMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVS 80

Query: 327  SIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
             +DP IYL++ DVRIG+P++TI+ V+ +++P  CRL+D TY+API VNIEY +GSH   T
Sbjct: 81   GVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKT 140

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
               K D+ IGR+PIMLRSCCCVL  +DEAELARLGECPLDPGGYFV+KG EK     EQL
Sbjct: 141  RLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEK-----EQL 195

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASVTSS+EA KSKTV   EKEKI + LNQF K  +PIMV+MKAM
Sbjct: 196  SKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKK-IPIMVVMKAM 254

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEK 1046
            GMESDQEVVQM+GRDP Y A+LLPSI+ECA   +YTQ+QALE++E KVKR  ++  + EK
Sbjct: 255  GMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEK 314

Query: 1047 EGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLEL 1226
            EGRALSI+RDVFLANVPVR  +FRPKC+YVAV+LRRM++AILNKDA+DDKDYVGNKRLEL
Sbjct: 315  EGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLEL 374

Query: 1227 SGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTG 1403
            SGQ ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STG
Sbjct: 375  SGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTG 434

Query: 1404 NWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 1583
            N+D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 435  NFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPC 494

Query: 1584 DTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFN 1763
            DTPEGEACGLVKNLALMTHVTTDE++GPLISLC+ LGVEDLELLSGEELH PNSFLV+ N
Sbjct: 495  DTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILN 554

Query: 1764 GLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKG 1943
            GLILGKHRRPQ FA A+RKLRRAGK+GEFVSVFVNEKQRC+YIASDGGRVCRPLVIADKG
Sbjct: 555  GLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKG 614

Query: 1944 ISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPF 2123
            +SR+KEHHMKEL  G+RTF+DFL +GLIEYLDVNE+NNALIALYEGEA PETTHIEIEPF
Sbjct: 615  VSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPF 674

Query: 2124 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTT 2303
            TILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+LLYLLVYPQRPLLTT
Sbjct: 675  TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTT 734

Query: 2304 RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKY 2483
            RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ +A+NQKY
Sbjct: 735  RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKY 794

Query: 2484 ANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPAG 2663
                 DRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DIYINK+S  +   +  S   
Sbjct: 795  ETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVSSES 854

Query: 2664 LPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQ 2843
            LPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL IKFLIRHTRRPE+GDKFSSRHGQ
Sbjct: 855  LPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQ 914

Query: 2844 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSA 3023
            KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSA
Sbjct: 915  KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 974

Query: 3024 FGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLD 3203
            FGEPSGHADRVE ISETL+KHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLD
Sbjct: 975  FGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1034

Query: 3204 KMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQ 3383
            KMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEVQ
Sbjct: 1035 KMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQ 1094

Query: 3384 VCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            VCR CGLLGYY+HKLK G+CS+CKNGDN+STMKLPYACKLL QELQSMN+VPRLKL+EA
Sbjct: 1095 VCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1153


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1849 bits (4789), Expect = 0.0
 Identities = 912/1139 (80%), Positives = 1016/1139 (89%), Gaps = 1/1139 (0%)
 Frame = +3

Query: 147  EDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITS 326
            +  ID+QF+  P KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNT I+KIV+AN+ I S
Sbjct: 23   DSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIES 82

Query: 327  SIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
            S DP IYL++ DVRIG+P+VT++ V+  ++P  CRL+D TY+APILV+IEY + SH    
Sbjct: 83   STDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKA 142

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
               KKDV IGR+PIMLRS CCVL+ +DEAELARLGECPLDPGGYF++KGTEKV+LIQEQL
Sbjct: 143  PREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQL 202

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASVTSSTEA KSKTV   E EKI + LN F  P +PIMV++KAM
Sbjct: 203  SKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAM 262

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEK 1046
            GMES QEVVQM+GRDPRYGALLLPSI+ECA + +YTQ+QALE++E KVK+F F++A  EK
Sbjct: 263  GMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEK 322

Query: 1047 EGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLEL 1226
            EGRAL I+RDVFLANVPV + +F PKCIYVAV++RRMMDAIL+KDA+DDKDYVGNKRLEL
Sbjct: 323  EGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLEL 382

Query: 1227 SGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGN 1406
            SGQ ISLLFEDLFKTM SEVKK ID +L K SRS   D SQHL  +II+ GLER +STGN
Sbjct: 383  SGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGN 442

Query: 1407 WDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 1586
            WDVKRFRMHRKGM+QV+ARLSFI+T+GH+T++SPQFEKSRKVSGPRALQPSQWGMLCPCD
Sbjct: 443  WDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCD 502

Query: 1587 TPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNG 1766
            TPEGEACGLVKNLALMTHVTTD+E+GPLISLC+ LGVEDLELLS EELH PNSFLV+FNG
Sbjct: 503  TPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNG 562

Query: 1767 LILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGI 1946
             ILGKHRRPQ+FA  +R LRRAGKIGEFVSVFVNEKQ C+YIASDGGRVCRPLVIADKG+
Sbjct: 563  RILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGV 622

Query: 1947 SRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPFT 2126
            SR+KE+HMKEL  G+RTF+DFL +GLIEYLDVNE+NNALIALYEGEA PETTHIEIEPFT
Sbjct: 623  SRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFT 682

Query: 2127 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTR 2306
            ILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQRPLLTT+
Sbjct: 683  ILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTK 742

Query: 2307 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKYA 2486
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK +++NQKY 
Sbjct: 743  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYE 802

Query: 2487 NNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSP-AG 2663
            NNT DRI+RP R       MQILDDDGLAAPGEIIRP+DIY+NKQSP    I   SP  G
Sbjct: 803  NNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPI---IMKGSPLPG 859

Query: 2664 LPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQ 2843
            +PD+AY+   Q +KG +GE  VVDRVALS+DK++ LCIKFLIR TRRPELGDKFSSRHGQ
Sbjct: 860  IPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQ 919

Query: 2844 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSA 3023
            KGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSA
Sbjct: 920  KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 979

Query: 3024 FGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLD 3203
            FGEPSGHAD+V+ ISETL+K GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLD
Sbjct: 980  FGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1039

Query: 3204 KMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQ 3383
            KMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLMISSDPFEVQ
Sbjct: 1040 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQ 1099

Query: 3384 VCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            VCR CGLLGYYNHKLK G+CS+CKNGDNISTMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1100 VCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1183

 Score = 1845 bits (4779), Expect = 0.0
 Identities = 916/1149 (79%), Positives = 1016/1149 (88%), Gaps = 5/1149 (0%)
 Frame = +3

Query: 129  TMGVLREDS---IDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKI 299
            TM    EDS   ID+Q L S  K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T I+KI
Sbjct: 36   TMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKI 95

Query: 300  VRANNIITSSIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEY 479
            VRAN  I S++DP IYL+Y DV IG+P++  D VT +L PQ+CRL+D TY+API V I+Y
Sbjct: 96   VRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIDY 155

Query: 480  TKGSHNVLTVATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTE 659
            T GSH   +V+TKK+V IGR+PIMLRS CCVL  +DE ELARLGECPLDPGGYFV+KGTE
Sbjct: 156  TTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTE 215

Query: 660  KVILIQEQLSKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGV 839
            KVILIQEQLSKNRIIID D KG + ASVTSSTE  KSKT+   EKEK+ + LN F K  V
Sbjct: 216  KVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMF-KTKV 274

Query: 840  PIMVMMKAMGMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFME--KKVK 1013
            PIMV+MKAMGMESDQEVVQMIGRDPR+ ALLLPSI+ECA   +YTQQQALEF+E  K +K
Sbjct: 275  PIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKMLK 334

Query: 1014 RFSFSNASLEKEGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDD 1193
              S+S   +EK  RALSI+RD+FLANVPV + +FR KCIYVAV++RRMM+AILNKDA+DD
Sbjct: 335  MPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDD 394

Query: 1194 KDYVGNKRLELSGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIIT 1373
            KDYVGNKRLELSGQ +SLLFEDLFKTMN E ++ ID +L + SRS  LD SQ++ +D IT
Sbjct: 395  KDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSIT 454

Query: 1374 HGLERAISTGNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQ 1553
             GLER +STGNWDVKRFRMHRKGMTQVVARLS+I ++GHMTKISPQFEKSRKVSGPRALQ
Sbjct: 455  MGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQ 514

Query: 1554 PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELH 1733
            PSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE++ P++SLC+ LGVEDLE LS EELH
Sbjct: 515  PSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELH 574

Query: 1734 APNSFLVMFNGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRV 1913
             P S+L+  NGLILGKH+ PQ FANA+R+LRRAGK+GEFVS+FVNEKQRC+YIASDGGRV
Sbjct: 575  MPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGRV 634

Query: 1914 CRPLVIADKGISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVP 2093
            CRPLVIADKG+SR+KEHHM+EL+ GLR F+ FL +GLIEYLDVNE+NN LIALYE EA P
Sbjct: 635  CRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATP 694

Query: 2094 ETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLL 2273
            ETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD LLYLL
Sbjct: 695  ETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLL 754

Query: 2274 VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 2453
            VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM
Sbjct: 755  VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 814

Query: 2454 KKLTAINQKYANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTN 2633
            KK +AI QKY N T DRII+PQR G EA+RMQILDDDG+AAPGE IR HDIYINK+SPT 
Sbjct: 815  KKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPTV 874

Query: 2634 KEINVRSPAGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPEL 2813
                V SP GLPDSAYKS+ QTYKGP+GETAVVDRVAL SD++NNL IKF+IRHTRRPEL
Sbjct: 875  TRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPEL 934

Query: 2814 GDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGV 2993
            GDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGV
Sbjct: 935  GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 994

Query: 2994 SSGRFHYGSAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIY 3173
            S GRFHYGSAFGEPSGHAD V+ ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIY
Sbjct: 995  SCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIY 1054

Query: 3174 YQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERL 3353
            YQKLKHMV+DKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ERL
Sbjct: 1055 YQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL 1114

Query: 3354 MISSDPFEVQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNV 3533
            MISSDPFEVQVCR CGLLGYYN+KLK G+CS CKNG+NISTMKLPYACKLLFQELQSMN+
Sbjct: 1115 MISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNI 1174

Query: 3534 VPRLKLTEA 3560
            VPRLKL EA
Sbjct: 1175 VPRLKLAEA 1183


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1842 bits (4772), Expect = 0.0
 Identities = 914/1149 (79%), Positives = 1015/1149 (88%), Gaps = 5/1149 (0%)
 Frame = +3

Query: 129  TMGVLREDS---IDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKI 299
            TM    EDS   ID+Q L SP K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T I+KI
Sbjct: 6    TMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKI 65

Query: 300  VRANNIITSSIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEY 479
            VRAN  I S +DP IYL+Y DV IG+P++  D VT +L PQ+CRL+D TY+API V IEY
Sbjct: 66   VRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIEY 125

Query: 480  TKGSHNVLTVATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTE 659
            T GSH   +V+TKK+V IGR+PIMLRS CCVL  +DE ELARLGECPLDPGGYFV+KGTE
Sbjct: 126  TTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTE 185

Query: 660  KVILIQEQLSKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGV 839
            KVILIQEQLSKNRIIID D KG + ASVTSSTE  KSKT+   EKEK+ + LN F K  V
Sbjct: 186  KVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMF-KTKV 244

Query: 840  PIMVMMKAMGMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFME--KKVK 1013
            PIMV+MKAMGMESDQEVVQMIGRDPR+ ALLLPSI+ECA   +YTQ QALEF+E  K +K
Sbjct: 245  PIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKMLK 304

Query: 1014 RFSFSNASLEKEGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDD 1193
              S+S   +EK  RALSI+RD+FLANVPV + +FR KCIYVAV++RRMM+AILNKDA+DD
Sbjct: 305  MPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDD 364

Query: 1194 KDYVGNKRLELSGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIIT 1373
            KDYVGNKRLELSGQ +SLLFEDLFKTMN E ++ ID +L + SRS  LD SQ++ +D IT
Sbjct: 365  KDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSIT 424

Query: 1374 HGLERAISTGNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQ 1553
             GLER +STGNWDVKRFRMHRKGMTQVVARLS+I ++GHMTKISPQFEKSRKVSGPRALQ
Sbjct: 425  MGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQ 484

Query: 1554 PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELH 1733
            PSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE++ P++SLC+ LGVEDLE LS EELH
Sbjct: 485  PSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELH 544

Query: 1734 APNSFLVMFNGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRV 1913
             P S+L+  NGLILGKH+ PQ FANA+R+LRRAGKIGEFVS+FVNEKQRC+YIASDGGRV
Sbjct: 545  MPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGRV 604

Query: 1914 CRPLVIADKGISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVP 2093
            CRPLVIADKG+SR+KEHHM+EL+ G+R F+ FL +GLIEYLDVNE+NN LIALYE EA P
Sbjct: 605  CRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATP 664

Query: 2094 ETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLL 2273
            ETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD LLYLL
Sbjct: 665  ETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLL 724

Query: 2274 VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 2453
            VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM
Sbjct: 725  VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM 784

Query: 2454 KKLTAINQKYANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTN 2633
            KK +AI QKY N T DRII+PQR G EA++MQILDDDG+AAPGE IR HDIYINK+SPT 
Sbjct: 785  KKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPTV 844

Query: 2634 KEINVRSPAGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPEL 2813
                + SP GLPDSAYK++ QTYKGP+GETAVVDRVAL SD++NNL IKF+IRHTRRPE+
Sbjct: 845  TRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPEI 904

Query: 2814 GDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGV 2993
            GDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGV
Sbjct: 905  GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGV 964

Query: 2994 SSGRFHYGSAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIY 3173
            S GRFHYGSAFGEPSGHAD V+ ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIY
Sbjct: 965  SCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIY 1024

Query: 3174 YQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERL 3353
            YQKLKHMVLDKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ERL
Sbjct: 1025 YQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL 1084

Query: 3354 MISSDPFEVQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNV 3533
            MISSDPFEVQVCR CGLLGYYN+KLK G+CS CKNG+NISTMKLPYACKLLFQELQSMN+
Sbjct: 1085 MISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNI 1144

Query: 3534 VPRLKLTEA 3560
            VPRLKL EA
Sbjct: 1145 VPRLKLAEA 1153


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1811 bits (4691), Expect = 0.0
 Identities = 898/1140 (78%), Positives = 1007/1140 (88%)
 Frame = +3

Query: 141  LREDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNII 320
            L E  ID+Q L +P KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVN GI+KIVRAN+ I
Sbjct: 17   LVEQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRI 76

Query: 321  TSSIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNV 500
             S++DP IYL++ DVRIG P+  +D V+ +LSP  CRL+D TY+APILVN+EY  GSH+ 
Sbjct: 77   VSTVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQ 136

Query: 501  LTVATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQE 680
             T   K DV IGR+PIMLRS  CVL  +DEAELARLGECPLDPGGYFV+KGTEKVILIQE
Sbjct: 137  KTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQE 196

Query: 681  QLSKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMK 860
            QLSKNRIIID D KG + ASVTSSTEA KSKT+   EKEK+ + LNQF K  +PIMV++K
Sbjct: 197  QLSKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKK-IPIMVVIK 255

Query: 861  AMGMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASL 1040
            AMGMESDQEVVQM+GRDPRY ALLLPSI+ECA  ++YTQQ+ALE+++ K           
Sbjct: 256  AMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK----------- 304

Query: 1041 EKEGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRL 1220
              E RAL+I+RDVFLANVPV + +FRPKC+YVAV+LRRMM+A+LNKDA+DDKDYVGNKRL
Sbjct: 305  --ENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRL 362

Query: 1221 ELSGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAIST 1400
            ELSGQ ISLLFEDLFKTM +EV++ ID VL K++RS   D +Q++ RD IT+GLER +ST
Sbjct: 363  ELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLST 422

Query: 1401 GNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 1580
            GN+DVKRF+MHRKGMTQV+ RLS+IA++G MT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 423  GNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 482

Query: 1581 CDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMF 1760
            CDTPEGEACGLVKNLALMTHVTTD+E+GPLISLC+ LGVEDLELLSGEELH PNSFLV+F
Sbjct: 483  CDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIF 542

Query: 1761 NGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADK 1940
            NGLILGKHRRPQ+F N++RKLRRAGKIGEFVSVFVNEKQR +Y+ASDGGRVCRPLVIAD+
Sbjct: 543  NGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADR 602

Query: 1941 GISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEP 2120
            G+SR+KEHHMKEL+ G+RTF+DFL +GLIEYLDVNE+NNAL+ALYEGEA PETTHIEIEP
Sbjct: 603  GVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEP 662

Query: 2121 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 2300
            FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDSLLYLLVYPQRPLLT
Sbjct: 663  FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLT 722

Query: 2301 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQK 2480
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK  AI QK
Sbjct: 723  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQK 782

Query: 2481 YANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPA 2660
            Y N   DRI+RP R     ER ++LD DGLAAPGEII+P DIY+ K+ P +    V+S A
Sbjct: 783  YENGASDRILRPDRT---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSA 839

Query: 2661 GLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHG 2840
             L +  Y+ +  +YKGP+GE+ V+DRVALSSD++NNLCIK +IRHTRRPE+GDKFSSRHG
Sbjct: 840  ALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHG 899

Query: 2841 QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGS 3020
            QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGS
Sbjct: 900  QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 959

Query: 3021 AFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVL 3200
            AFGEPSGHAD VE ISETLV  GFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVL
Sbjct: 960  AFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1019

Query: 3201 DKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEV 3380
            DKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEV
Sbjct: 1020 DKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEV 1079

Query: 3381 QVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            QVCR CGLLGY+N KL+AG+CSTCKNGDNISTMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1080 QVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1165

 Score = 1791 bits (4638), Expect = 0.0
 Identities = 888/1141 (77%), Positives = 1003/1141 (87%), Gaps = 3/1141 (0%)
 Frame = +3

Query: 147  EDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITS 326
            +   D++ L +P KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T I+KIVRAN++I +
Sbjct: 28   DSGFDQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIVA 87

Query: 327  SIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
            S  P IYL++ +V IGKP++ ID VT +L+PQ CRL+D TY+API  ++EYT GSH+   
Sbjct: 88   SRYPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPD 147

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
            +  K  V IGR+PIMLRSCCCVL+ RDEAELA+LGECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 148  IKRKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQL 207

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASVTSSTE IK+KTV + EKEK+ + LN+F K  VP+MV+MKAM
Sbjct: 208  SKNRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKK-VPLMVVMKAM 266

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEK 1046
            GMESDQEV QM+GRDPRY  LLLPSI+EC    VYT++QALE+++K VKR ++SN + EK
Sbjct: 267  GMESDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEK 326

Query: 1047 EGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLEL 1226
            EG A S +RDVFLANVPV + +FRPKCIYVAV++RR+MDAILNKDA+DDKDYVGNKRLEL
Sbjct: 327  EGAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 386

Query: 1227 SGQHISLLFEDLFKTMNSEVKKNIDYVLEK--KSRSCPLDTSQHLARDIITHGLERAIST 1400
            SGQ ISLLFEDLFK+M +EVK   D +LEK  K+++  + T     R IIT GLER +ST
Sbjct: 387  SGQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLST 446

Query: 1401 GNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 1580
            GN+++KRFRM RKGMTQV+ RLSFI  +GHMT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 447  GNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 506

Query: 1581 CDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMF 1760
            CDTPEGE+CGLVKNLALMTHVTTDEE+ PLISLC SLGVED++ LS EELH P+SFLV+F
Sbjct: 507  CDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIF 566

Query: 1761 NGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADK 1940
            NGLILGKHRRP  FA AIRKLRRAGKIGEFVSV+VNEKQ C+Y+ASDGGRVCRPLVIADK
Sbjct: 567  NGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADK 626

Query: 1941 GISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEP 2120
            GISR+K+HHMKEL  G+RTF+DFL +GL+EYLDVNE+NNALIALYEG+A  ETTHIEIEP
Sbjct: 627  GISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEP 686

Query: 2121 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 2300
            FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMDSLLYLLVYPQRPLLT
Sbjct: 687  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 746

Query: 2301 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQK 2480
            T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK  AI QK
Sbjct: 747  TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQK 806

Query: 2481 YANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTN-KEINVRSP 2657
            ++N+T DRI+RP R    A RMQILDDDG+AAPGEI+RP+DIYINKQSP + +     S 
Sbjct: 807  HSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 866

Query: 2658 AGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRH 2837
            A LPDSAY+S  Q++KG  GE  VVDRV L SDKDNN+CIKFLIRHTRRPELGDKFSSRH
Sbjct: 867  ANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRH 924

Query: 2838 GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYG 3017
            GQKGVCGTI+ QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYG
Sbjct: 925  GQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 984

Query: 3018 SAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMV 3197
            SAFGE SGHAD+VE ISETLV  GF+YSGKDFIYSGITG PLQAYIFMGPIYYQKLKHMV
Sbjct: 985  SAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1044

Query: 3198 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 3377
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE
Sbjct: 1045 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1104

Query: 3378 VQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTE 3557
            VQVC ACGLLGYYNHKLK G+CS+CKNGDNISTMKLPYACKL+ QELQSMN+VPRLKL +
Sbjct: 1105 VQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLAD 1164

Query: 3558 A 3560
            A
Sbjct: 1165 A 1165


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
            [Fragaria vesca subsp. vesca]
          Length = 1163

 Score = 1781 bits (4612), Expect = 0.0
 Identities = 870/1135 (76%), Positives = 996/1135 (87%)
 Frame = +3

Query: 156  IDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITSSID 335
            ID++ L +P KSA DKF L+PEFLKVRGLVKQHLDSFNYFVNTGI+KIVRAN+ I S +D
Sbjct: 33   IDKELLAAPIKSAKDKFALIPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVD 92

Query: 336  PRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLTVAT 515
            P I+L++ +V I +P++T D VT+E++P  CRL+D TYSAPI V++EY +GSH+   +AT
Sbjct: 93   PSIWLRFNNVYIDRPSLTTDGVTTEIAPHTCRLSDMTYSAPIRVDVEYVEGSHDQKMIAT 152

Query: 516  KKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 695
            +K + IGRLPIMLRSCCC L  + E+ELA LGECPLDPGGYF++KG EKV+LIQEQLSKN
Sbjct: 153  RKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLDPGGYFIIKGNEKVLLIQEQLSKN 212

Query: 696  RIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAMGME 875
            RIIID D KG + ASVTSS+E IKSKT+   EK+KI + LNQF+K  +PIMV+MKAMGM 
Sbjct: 213  RIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKK-IPIMVVMKAMGMT 271

Query: 876  SDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEKEGR 1055
            SDQEVVQM+GRDPRYGALL+PSI+ECA + +YT++QAL ++E KVKR  F +AS +K+ +
Sbjct: 272  SDQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSMFDSASSDKDSK 331

Query: 1056 ALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLELSGQ 1235
             ++++RD+F+ANVPVR  +FRPKCIYVAV+LRR+MDAILNKD +DDKDYVGNKRLELSGQ
Sbjct: 332  VMAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDYVGNKRLELSGQ 391

Query: 1236 HISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWDV 1415
             ISLLFEDLFKTM SEV+K +D +L K SRS   D +Q++ +D I+ GLER +STGN+D+
Sbjct: 392  SISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQISLGLERTLSTGNFDL 451

Query: 1416 KRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 1595
            KRF+MHR GMTQV+ARLSFI ++G MT+  PQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 452  KRFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 511

Query: 1596 GEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNGLIL 1775
            GEACGLVKNLALM HVTTDEE+GPLISLC  LGVEDLE LS EELH+PNSFLV+FNG IL
Sbjct: 512  GEACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHSPNSFLVLFNGDIL 571

Query: 1776 GKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGISRV 1955
            GKHR+PQ  A A+RKLRRAGKIGEFVSVFVNEKQ C+YIASDGGRVCRPLVIADKGISRV
Sbjct: 572  GKHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGISRV 631

Query: 1956 KEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPFTILG 2135
            KE+HM+EL  G+RTF+DFL +GLIEYLDVNEQNNALIALYE EA  ETTHIEIEPFTILG
Sbjct: 632  KEYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIALYEDEATTETTHIEIEPFTILG 691

Query: 2136 VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIE 2315
            V AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R+D LLYLLVYPQRPLLTT+TIE
Sbjct: 692  VIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRID-LLYLLVYPQRPLLTTKTIE 750

Query: 2316 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKYANNT 2495
            LVG+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI+MKK    NQ Y+NNT
Sbjct: 751  LVGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCILMKKFVVANQNYSNNT 810

Query: 2496 MDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPAGLPDS 2675
             DRII+P +   ++ +M++LDDDG+AAPGEII  +DIY+ KQ P      +RS  GL DS
Sbjct: 811  QDRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIYVKKQVPIVTRGAIRS--GLKDS 868

Query: 2676 AYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQKGVC 2855
             Y+S  Q YKGP GE+ VVD+VAL SDK NNLC+K LIRHTRRPE+GDKFSSRHGQKGVC
Sbjct: 869  DYRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRHTRRPEVGDKFSSRHGQKGVC 928

Query: 2856 GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEP 3035
            GTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEP
Sbjct: 929  GTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 988

Query: 3036 SGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHA 3215
            SGHAD+VE ISETLV+ GFSY GKD+I SGITG PLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 989  SGHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA 1048

Query: 3216 RARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRA 3395
            R  GPRV LTRQPTEG++R+GGLR+GEMERDCLIAYGASM+++ERLMISSDPFEVQVCR 
Sbjct: 1049 RGSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQVCRV 1108

Query: 3396 CGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            CGLLGYYNHK+KAG+CS+CKNGDNISTMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1109 CGLLGYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163


>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
            gi|561026273|gb|ESW24958.1| hypothetical protein
            PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 1770 bits (4585), Expect = 0.0
 Identities = 876/1141 (76%), Positives = 998/1141 (87%), Gaps = 3/1141 (0%)
 Frame = +3

Query: 147  EDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITS 326
            +   D++ L +P KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T I+KIVRANN+I++
Sbjct: 24   DSGFDQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANNLISA 83

Query: 327  SIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
            +  P IYL++ +V+I KP +  + VT +++PQ CRL+D TY+API V++EYT GS +   
Sbjct: 84   TRHPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHGSRDDPR 143

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
            +  + +V IGR+PIMLRSCCCVL  RD+AELA+LGECPLDPGGYFVVKGTEKVILIQEQL
Sbjct: 144  LHKRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQL 203

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASVTSSTE IK+KT+ + E EK+ + LNQF K  VP+M +MKAM
Sbjct: 204  SKNRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKK-VPLMAVMKAM 262

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEK 1046
            G+ESDQEV QM+GRDPRY  LLLPS +EC   NVYTQ+QALE+++K VKR  +S+ S EK
Sbjct: 263  GIESDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSSNSAEK 322

Query: 1047 EGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLEL 1226
            EGRA S++RDVFLANVPV   +FRPKCIYVAV++RR+MDAILNKDA+DDKDYVGNKRLEL
Sbjct: 323  EGRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 382

Query: 1227 SGQHISLLFEDLFKTMNSEVKKNIDYVLEK--KSRSCPLDTSQHLARDIITHGLERAIST 1400
            SGQ ISLLFEDLFK+M +EVK   D +L+K  K+R+  + T  +  ++IIT GLER +ST
Sbjct: 383  SGQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLERTLST 442

Query: 1401 GNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 1580
            GN+++KRFRM RKGMTQV+ RLSFI  +GHMT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 443  GNFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 502

Query: 1581 CDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMF 1760
            CDTPEGE+CGLVKNLALMTHVTTDEE+ PLIS+C+SLGVEDLELLS EELH P+SFLV+ 
Sbjct: 503  CDTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDSFLVIL 562

Query: 1761 NGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADK 1940
            NGLILGKH+RP  FA AIRKLRR GKIGEFVSVFV+EKQ C+Y+ASDGGRVCRPLVIADK
Sbjct: 563  NGLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPLVIADK 622

Query: 1941 GISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEP 2120
            GISR+K+HHMKEL  G+RTF+DFL +GL+EYLDVNE+NN LIALYEG+A  ETTHIEIEP
Sbjct: 623  GISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTHIEIEP 682

Query: 2121 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 2300
            FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMDSLLYLLVYPQRPLLT
Sbjct: 683  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 742

Query: 2301 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQK 2480
            T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK +A+ QK
Sbjct: 743  TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVIQK 802

Query: 2481 YANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPA 2660
            ++N+T DRI+RP R    A RM+ILDDDG+AAPGEI++P DIYINKQSP +        A
Sbjct: 803  HSNDTSDRILRPNRAADTAGRMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTPRTGAA 862

Query: 2661 G-LPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRH 2837
            G LPDSAY+S  Q++KG  GE  VVDRV L SDKD N+CIKFLIRHTRRPELGDKFSSRH
Sbjct: 863  GNLPDSAYRSNSQSFKGHGGE--VVDRVVLCSDKDKNMCIKFLIRHTRRPELGDKFSSRH 920

Query: 2838 GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYG 3017
            GQKGVCGTI+QQEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYG
Sbjct: 921  GQKGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 980

Query: 3018 SAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMV 3197
            SAFGE SGHAD+VE ISETLV  GFSYSGKDFIYSGITG PLQAYIFMGPIYYQKLKHMV
Sbjct: 981  SAFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1040

Query: 3198 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 3377
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE
Sbjct: 1041 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1100

Query: 3378 VQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTE 3557
            VQVC ACGLLGYYNHKLK G+CS CKNGD ISTMKLPYACKL+ QELQSMN+VPRLKL +
Sbjct: 1101 VQVCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLAD 1160

Query: 3558 A 3560
            A
Sbjct: 1161 A 1161


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X3 [Citrus sinensis]
          Length = 1058

 Score = 1769 bits (4582), Expect = 0.0
 Identities = 867/1059 (81%), Positives = 958/1059 (90%)
 Frame = +3

Query: 384  VTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLTVATKKDVTIGRLPIMLRSC 563
            +T+D V+ +L+P  CRL+D TY+APILVNIEY +GSH   T   K DV IGR+PIMLRSC
Sbjct: 1    MTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSC 60

Query: 564  CCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDRDNKGLLIASV 743
             CVL  +DEAELARLGECPLDPGGYF++KGTEKV+LIQEQLSKNR+IID D KG + ASV
Sbjct: 61   RCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASV 120

Query: 744  TSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAMGMESDQEVVQMIGRDPRYG 923
            TSSTE +KSKTV   EK K+ + LNQF K  +PIMV+MKAMG+ESDQEVVQM+GRDPRY 
Sbjct: 121  TSSTETVKSKTVIQMEKGKMYLLLNQFVKK-IPIMVVMKAMGIESDQEVVQMVGRDPRYS 179

Query: 924  ALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEKEGRALSIIRDVFLANVPVR 1103
            ALLLPSI+ECA  ++YTQ++ALE++E KVKR +F +   ++EGRA SI+RDVFLANVPV 
Sbjct: 180  ALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVH 239

Query: 1104 ELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLELSGQHISLLFEDLFKTMNSE 1283
              +FRPKC YVAV+LRRM++A+LNKDA+DDKDYVGNKRLELSGQ +SLLFEDLFKTM SE
Sbjct: 240  NNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISE 299

Query: 1284 VKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWDVKRFRMHRKGMTQVVAR 1463
            V+K +D +L K SRS   D SQ + RD IT GLER +STGN+DVKRF+MHRKGMTQV+AR
Sbjct: 300  VQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLAR 359

Query: 1464 LSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV 1643
            LSFI T+GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV
Sbjct: 360  LSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV 419

Query: 1644 TTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNGLILGKHRRPQFFANAIRKL 1823
            TTDEE+GPLISLC+ LGVEDLELLSGEELH PNSFLV+FNGLILGKHRRP+ FA+ +RKL
Sbjct: 420  TTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKL 479

Query: 1824 RRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGISRVKEHHMKELKVGLRTFN 2003
            RRAGKIGEFVSVFVNEKQRC+YIASDGGRVCRPLVIADKGISR+KEHHMKEL  G+R+F+
Sbjct: 480  RRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFD 539

Query: 2004 DFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPFTILGVCAGLIPFPHHNQSPR 2183
            DFL EGLIEYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILGV AGLIP+PHHNQSPR
Sbjct: 540  DFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPR 599

Query: 2184 NTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVA 2363
            NTYQCAMGKQAMGNIA+NQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVA
Sbjct: 600  NTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVA 659

Query: 2364 VMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKYANNTMDRIIRPQRVGREAER 2543
            VMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK TAINQKYAN+T DRI+RP R G  AER
Sbjct: 660  VMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAER 719

Query: 2544 MQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPAGLPDSAYKSAIQTYKGPQGET 2723
            MQILDDDGLAAPGEII+P+D+YINK+SP     ++ SP G  DS Y+SA QTYKGP GET
Sbjct: 720  MQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGET 779

Query: 2724 AVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSERGI 2903
             VVDRVAL SDK+ +LCIKFLIRHTRRPELGDKFSSRHGQKGVCGTI+QQEDFPFSERGI
Sbjct: 780  CVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGI 839

Query: 2904 CPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEVISETLVK 3083
            CPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPSGHAD VE ISETLVK
Sbjct: 840  CPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVK 899

Query: 3084 HGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEG 3263
            HGFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR  GPRVMLTRQPTEG
Sbjct: 900  HGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEG 959

Query: 3264 RSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRACGLLGYYNHKLKAGVC 3443
            R+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVCR CGLLGYYNHKLKAG+C
Sbjct: 960  RARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGIC 1019

Query: 3444 STCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            STCKNGDNIS+MKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1020 STCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1058


>ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum]
            gi|557099252|gb|ESQ39616.1| hypothetical protein
            EUTSA_v10000748mg [Eutrema salsugineum]
          Length = 1164

 Score = 1762 bits (4563), Expect = 0.0
 Identities = 869/1167 (74%), Positives = 1006/1167 (86%), Gaps = 24/1167 (2%)
 Frame = +3

Query: 132  MGVLREDS--------IDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTG 287
            MG+ RED         +D Q L +P KS  DKFQL+PEFLKVRGLVKQHLDSFNYFVN G
Sbjct: 1    MGLDREDLDLINDDHFVDRQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFVNVG 60

Query: 288  IRKIVRANNIITSSIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILV 467
            I+KIVRAN++ITSS+DP IYL++ +VR+G+P++   ++  E++P  CRL D TY+API V
Sbjct: 61   IKKIVRANSLITSSLDPEIYLRFKEVRVGEPSILNVNMAEEINPHMCRLADMTYAAPIYV 120

Query: 468  NIEYTKGSHNVLTVATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVV 647
            NIEY  GSH     + K +V IGR+PIMLRSC CVL+ +DE ELARLGECPLDPGGYFV+
Sbjct: 121  NIEYAHGSHGKTQHSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVI 180

Query: 648  KGTEKVILIQEQLSKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFN 827
            KGTEKV+LIQEQLSKNRIIID D KG + ASVTSSTE  KSKTV   EK KI + L+QF 
Sbjct: 181  KGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIYLFLHQFV 240

Query: 828  KPGVPIMVMMKAMGMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKK 1007
            K  +PI++++KAMGMESDQE+VQM+GRDPR+ A LLPSI+EC ++ V T++QAL+++E K
Sbjct: 241  KK-IPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYLEAK 299

Query: 1008 VKRFSFSNASLEKEGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAV 1187
            VK+ S+     EK+GRAL I+RDVFLA+VPVR+ +FR KC YV V+LRRM++A+LNKDA+
Sbjct: 300  VKKTSYGPPP-EKDGRALYILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAM 358

Query: 1188 DDKDYVGNKRLELSGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDI 1367
            DDKDYVGNKRLELSGQ ISLLFEDLFKTM +E  K +D +L+K +R+   D SQ L  + 
Sbjct: 359  DDKDYVGNKRLELSGQLISLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQCLTGEK 418

Query: 1368 ---ITHGLERAISTGNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSG 1538
               I+ GLER +STGN+D+KRFRMHRKGMTQV+ RLSFI ++G +TKISPQFEKSRKVSG
Sbjct: 419  NHNISFGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSG 478

Query: 1539 PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLS 1718
            PR+LQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEE+GPL+++C+ LGV DLE+LS
Sbjct: 479  PRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLS 538

Query: 1719 GEELHAPNSFLVMFNGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIAS 1898
             EELH P+SFLV+FNGLILGKHRRPQ+FAN++R+LRRAGKIGEFVSVF+NEKQ C+Y+AS
Sbjct: 539  AEELHTPDSFLVIFNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVAS 598

Query: 1899 DGGRVCRPLVIADKGISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYE 2078
            DGGRVCRPLVIADKG+SRVK+HHMKEL+ G+RTF+DF+ +GLIEYLDVNE+NNALIALYE
Sbjct: 599  DGGRVCRPLVIADKGVSRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYE 658

Query: 2079 GEAVPE-------------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAM 2219
             +A  E             TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAM
Sbjct: 659  SDATSEMAETAEAAKIREGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAM 718

Query: 2220 GNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDA 2399
            GNIAYNQL RMD+LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS +GYDIEDA
Sbjct: 719  GNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDA 778

Query: 2400 IVMNKSSLDRGFGRCIVMKKLTAINQKYANNTMDRIIRPQRVGREAERMQILDDDGLAAP 2579
            IVMNK+SLDRGFGRCIVMKK+ A  QKY N+ +DRI+RPQR G +AE+MQILDDDG+AAP
Sbjct: 779  IVMNKASLDRGFGRCIVMKKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIAAP 838

Query: 2580 GEIIRPHDIYINKQSPTNKEINVRSPAGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDK 2759
            GEIIRP+D+YINKQ P +   N+ SP  L DS Y+ A + +KGP+GET VVDRVAL SDK
Sbjct: 839  GEIIRPNDVYINKQIPVDTRDNITSP--LSDSQYRPAREYFKGPEGETQVVDRVALCSDK 896

Query: 2760 DNNLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFP 2939
            + NLCIK++IRHTRRPELGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFP
Sbjct: 897  NGNLCIKYIIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFP 956

Query: 2940 SRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEVISETLVKHGFSYSGKDFIY 3119
            SRMT+GKMIELLG KAGV SGRFHYGSAFGE SGHAD+VE IS TLVKHGFSYSGKD +Y
Sbjct: 957  SRMTVGKMIELLGSKAGVCSGRFHYGSAFGERSGHADKVETISATLVKHGFSYSGKDLLY 1016

Query: 3120 SGITGSPLQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEM 3299
            SG++G PLQ Y+FMGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEM
Sbjct: 1017 SGLSGEPLQTYVFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEM 1076

Query: 3300 ERDCLIAYGASMMIFERLMISSDPFEVQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTM 3479
            ERDCLIAYGASM+I+ERLMISSDPFEVQVCR CGLLGYYN+KLK   CSTCKNGDNI+TM
Sbjct: 1077 ERDCLIAYGASMLIYERLMISSDPFEVQVCRTCGLLGYYNYKLKKAFCSTCKNGDNIATM 1136

Query: 3480 KLPYACKLLFQELQSMNVVPRLKLTEA 3560
            KLPYACKLLFQELQSMNVVPRLKL EA
Sbjct: 1137 KLPYACKLLFQELQSMNVVPRLKLVEA 1163


>ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer
            arietinum]
          Length = 1134

 Score = 1755 bits (4546), Expect = 0.0
 Identities = 872/1136 (76%), Positives = 975/1136 (85%), Gaps = 1/1136 (0%)
 Frame = +3

Query: 156  IDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITSSID 335
            +D + L  P K AVDKFQLLPEFLK RGLVKQHLDSFNYFVNT I+KIVRANN++ SS  
Sbjct: 1    MDNEPLIDPQKPAVDKFQLLPEFLKYRGLVKQHLDSFNYFVNTDIKKIVRANNLVQSSRY 60

Query: 336  PRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLTVAT 515
            P IYL++ DVRIGKP    D  +  +SPQ CRL+D TY+APILV++EYT+GS + +    
Sbjct: 61   PHIYLRFLDVRIGKPERIFDGSSEYVSPQTCRLSDQTYAAPILVSVEYTQGSPDNVIKIP 120

Query: 516  KKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 695
            K  V IGR+PIMLRSCCCVL  RDEAELA+LGECPLDPGGYFV+KGTEKVILIQEQLSKN
Sbjct: 121  KNKVVIGRMPIMLRSCCCVLYNRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKN 180

Query: 696  RIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAMGME 875
            RIIID D K  + ASVTSSTE +K+KT  + E+EK+ + LNQF    VP+M++MKAMGME
Sbjct: 181  RIIIDTDKKKNITASVTSSTEKVKTKTTILMEREKMWLELNQFQTK-VPLMIVMKAMGME 239

Query: 876  SDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEKEGR 1055
            SD EVVQMIGRDPRYG LLLPSI+EC    V TQ QAL +++ K KR  FS    EKEGR
Sbjct: 240  SDHEVVQMIGRDPRYGLLLLPSIEECNKSGVSTQAQALAYLDSKAKRSMFSTMQPEKEGR 299

Query: 1056 ALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLELSGQ 1235
            A SI+RDVFLANVPV E +FRPKCIYVAV++RR++DAILNKDA+DDKDYVGNKRLELSGQ
Sbjct: 300  AFSILRDVFLANVPVHEDNFRPKCIYVAVMMRRILDAILNKDAMDDKDYVGNKRLELSGQ 359

Query: 1236 HISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWDV 1415
             ISLLFEDLFKTM +E++   D  LEK  R+   D +  L RD I+ GLER +STGN+D+
Sbjct: 360  LISLLFEDLFKTMTTELQTLTDKYLEKPDRAKKFDFTTLLNRDYISPGLERYLSTGNFDI 419

Query: 1416 KRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 1595
            KRF+MHR GMTQV+ RLSFI+ +G MT++ PQFEKS+KVSGPRALQPSQWGMLCPCDTPE
Sbjct: 420  KRFKMHRSGMTQVLQRLSFISALGQMTRVKPQFEKSKKVSGPRALQPSQWGMLCPCDTPE 479

Query: 1596 GEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNGLIL 1775
            GEACGLVKNLALMTHVTTD+++ PLISLC+ LGVED+E LSGEELH PNS+LV+FNGLIL
Sbjct: 480  GEACGLVKNLALMTHVTTDDDEAPLISLCYILGVEDIEHLSGEELHTPNSYLVIFNGLIL 539

Query: 1776 GKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGISRV 1955
            GKHRRPQ FA A+R LRRAG IGEFVSV++NEKQ C+Y+ASDGGRVCRPLVIADKGISRV
Sbjct: 540  GKHRRPQRFATAMRNLRRAGVIGEFVSVYLNEKQCCVYLASDGGRVCRPLVIADKGISRV 599

Query: 1956 KEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPFTILG 2135
            K HHMKELK G+ TFN FL  GLIEYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILG
Sbjct: 600  KAHHMKELKDGVTTFNHFLRNGLIEYLDVNEENNALIALYEGDATPKTTHIEIEPFTILG 659

Query: 2136 VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIE 2315
            VCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQRPLLTT++IE
Sbjct: 660  VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKSIE 719

Query: 2316 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQKYANNT 2495
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+  AI QKY+N T
Sbjct: 720  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYVAIRQKYSNGT 779

Query: 2496 MDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSP-TNKEINVRSPAGLPD 2672
             DRIIRP R      RMQILDDDG+AAPGEIIRP+D+YINKQSP   +     S A LPD
Sbjct: 780  EDRIIRPNRAADTTGRMQILDDDGIAAPGEIIRPNDMYINKQSPIETRATTTGSTAKLPD 839

Query: 2673 SAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHGQKGV 2852
            +AY+S  QT+    G   VVDRV L +DKD NLCIKFL RHTRRPELGDKFSSRHGQKGV
Sbjct: 840  NAYRSTPQTFNKCHG-GEVVDRVVLCNDKDTNLCIKFLTRHTRRPELGDKFSSRHGQKGV 898

Query: 2853 CGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGE 3032
            CG    QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGE
Sbjct: 899  CGXXXXQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 958

Query: 3033 PSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMH 3212
             SGHAD+VE ISETLVKHGF+Y+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 959  RSGHADKVETISETLVKHGFNYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1018

Query: 3213 ARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCR 3392
            AR  GPR ++TRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEVQVCR
Sbjct: 1019 ARGNGPRALMTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCR 1078

Query: 3393 ACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
             CGLLGYYNHKLK G+CS+CKNG+ IST+KLPYACKLL QELQSMN+VPRLKL +A
Sbjct: 1079 KCGLLGYYNHKLKTGICSSCKNGEQISTVKLPYACKLLMQELQSMNIVPRLKLADA 1134


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1166

 Score = 1754 bits (4543), Expect = 0.0
 Identities = 874/1141 (76%), Positives = 992/1141 (86%), Gaps = 3/1141 (0%)
 Frame = +3

Query: 147  EDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITS 326
            +   D++ L +P KSAVDKFQL+PEFLKVRGLVKQHLDSFNYFV T I+KIVRANN+I +
Sbjct: 29   DSGFDQRVLTAPIKSAVDKFQLIPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANNLIMA 88

Query: 327  SIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
            S  P IYL++ +V IGKP++ ID VT  L+PQ CRL+D TY+API  ++EYT  SH+   
Sbjct: 89   SRYPHIYLRFLNVGIGKPSMMIDEVTEGLTPQTCRLSDLTYAAPICADVEYTLRSHDKPD 148

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
                  V IGR+PIMLRSCCCVL+ +DEAELA+LGECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 149  NKRTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQL 208

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASVTSSTE IK+KTV + E EK+ + LN+F K  VP+MV+MKAM
Sbjct: 209  SKNRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKFPKK-VPLMVVMKAM 267

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEK 1046
            GMESDQEV+QM+GRDPRY  LLLPSI+EC    VYT++QALE+++K VKR ++S+ S EK
Sbjct: 268  GMESDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQALEYLDKLVKRPTYSSNSAEK 327

Query: 1047 EGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLEL 1226
            EG A S +RDVFLANVPV + +F+ KCIYVAV++RR+MDAILNKDA+DDKDYVGNKRLEL
Sbjct: 328  EGAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 387

Query: 1227 SGQHISLLFEDLFKTMNSEVKKNIDYVLEK--KSRSCPLDTSQHLARDIITHGLERAIST 1400
            SGQ ISLLFEDLFK+M +EVK   D +L+K  K+++  + T     R IIT GLER +ST
Sbjct: 388  SGQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLTRTRSIITLGLERTLST 447

Query: 1401 GNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 1580
            GN+++KRFRM RKGMTQV+ RLSFI  +GHMT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 448  GNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 507

Query: 1581 CDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMF 1760
            CDTPEGE+CGLVKNLALMTHVTTDEE+ PLISL +SL V  +E L  EELH P+SFLV+F
Sbjct: 508  CDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEHLFAEELHTPDSFLVIF 567

Query: 1761 NGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADK 1940
            NGLILGKHRRP  FA  IRKLRRAG+IGEFVSV+VNEKQ C+Y+ASDGGRVCRPLVIADK
Sbjct: 568  NGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADK 627

Query: 1941 GISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEP 2120
            GISR+K+HHMKEL  G+ TF+DFL +GL+EYLDVNE+NNALIALYEG+A  ETTHIEIEP
Sbjct: 628  GISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEP 687

Query: 2121 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 2300
            FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMDSLLYLLVYPQRPLLT
Sbjct: 688  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 747

Query: 2301 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQK 2480
            T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK  AI QK
Sbjct: 748  TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQK 807

Query: 2481 YANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTN-KEINVRSP 2657
            ++N+T DRI+RP R    A RMQILDDDG+AAPGEI+RP+DIYINKQSP + +     S 
Sbjct: 808  HSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 867

Query: 2658 AGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRH 2837
            A LPDSAY+S  Q++KG  GE  VVDRV L SDKDNN+CIKFLIRHTRRPELGDKFSSRH
Sbjct: 868  ANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRH 925

Query: 2838 GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYG 3017
            GQKGVCGTI+ QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYG
Sbjct: 926  GQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 985

Query: 3018 SAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMV 3197
            SAFGE SGHAD+VE ISETLV  GF+YSGKDFIYSGITG PLQAYIFMGPIYYQKLKHMV
Sbjct: 986  SAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1045

Query: 3198 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 3377
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE
Sbjct: 1046 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1105

Query: 3378 VQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTE 3557
            VQVC ACGLLGYYNHKLK G+CS+CKNGDNISTMKLPYACKL+ QELQSMN+VPRLKL +
Sbjct: 1106 VQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLAD 1165

Query: 3558 A 3560
            A
Sbjct: 1166 A 1166


>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            tuberosum]
          Length = 1151

 Score = 1750 bits (4533), Expect = 0.0
 Identities = 870/1141 (76%), Positives = 986/1141 (86%), Gaps = 4/1141 (0%)
 Frame = +3

Query: 150  DSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITSS 329
            + ID+Q+L SP K++VDK+QL+PEFLKVRGLVKQHL SFNY V T I+KIVRAN+ I SS
Sbjct: 18   NGIDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIKKIVRANHEIRSS 77

Query: 330  I-DPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
              DP IYL+Y DVRIG+P++T D V  +LSPQ+CRL D TY+API V ++YT   +  ++
Sbjct: 78   TRDPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVDYTMTRNGQIS 137

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
            + T+KDV I R+PIMLRSC CVL  +DE +LA+LGECPLDPGGYF+V G EKVILIQEQL
Sbjct: 138  MLTQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNGREKVILIQEQL 197

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASV  STE  KSKT+   EKEK+ + LN F K  VPIMV+MKAM
Sbjct: 198  SKNRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMF-KTKVPIMVVMKAM 256

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFME--KKVKRFSFSNASL 1040
            GMESDQEVVQMIGRDPRY ALLLPSI+ECA   +YTQ QALEF+E  K +   S+ NA +
Sbjct: 257  GMESDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKMLTMPSYYNAPV 316

Query: 1041 EKEGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRL 1220
            EK  RALSI+RD+FLA+VPV + +FR KCIYVAV++RR+M+AILNKDA+DDKDYVGNKRL
Sbjct: 317  EKGARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMDDKDYVGNKRL 376

Query: 1221 ELSGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLAR-DIITHGLERAIS 1397
            ELSGQ +SLLFEDLFKTMN EV++  D      + S   D   H+ + + IT  L+R +S
Sbjct: 377  ELSGQLLSLLFEDLFKTMNDEVRREFD------ASSKSSDLLYHVKKSNRITVELQRTLS 430

Query: 1398 TGNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLC 1577
            TGNWD+KRFRMHRKGMT+V+ARLS+I T+G+MTKI PQFEKSRKVSGPRALQPSQ+GM+C
Sbjct: 431  TGNWDIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMIC 490

Query: 1578 PCDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVM 1757
            PCDTPEGEACGLVKNLALMTHVTTDE+  P++SLC+ LGVEDLE LS  ELH PNS+L++
Sbjct: 491  PCDTPEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAELHTPNSYLII 550

Query: 1758 FNGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIAD 1937
             NGLILGKH+ PQ FAN +RKLRRAG+I EFVS+FVN+KQ C+YIASDGGRVCRPLVIA+
Sbjct: 551  LNGLILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAE 610

Query: 1938 KGISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIE 2117
            KG+SR+KEHHM EL+ G+R FN FL +GLIEYLDVNE+NN+LIALYE EA P+TTHIEIE
Sbjct: 611  KGVSRIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATPDTTHIEIE 670

Query: 2118 PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLL 2297
            PFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD LLYLLVYPQRPLL
Sbjct: 671  PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLL 730

Query: 2298 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQ 2477
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK  AI Q
Sbjct: 731  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYAAICQ 790

Query: 2478 KYANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSP 2657
            KY N T DR+I+PQR G EAE+MQILDDDGLA+PGEIIR  DIYINK+SPT     V SP
Sbjct: 791  KYKNLTSDRLIKPQRQGSEAEKMQILDDDGLASPGEIIRNRDIYINKESPTVTITQVTSP 850

Query: 2658 AGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRH 2837
             GLPDSAYKS+ QTYKG +GE  V+DRVAL SD++NNL IKF+IR TRRPE+GDKFSSRH
Sbjct: 851  MGLPDSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPEIGDKFSSRH 910

Query: 2838 GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYG 3017
            GQKGVCG I+QQED PFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYG
Sbjct: 911  GQKGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYG 970

Query: 3018 SAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMV 3197
            SAFGEPSGHAD V+ ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMV
Sbjct: 971  SAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMV 1030

Query: 3198 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 3377
            LDKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I ERLM+SSDPFE
Sbjct: 1031 LDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFE 1090

Query: 3378 VQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTE 3557
             QVCR CGLLGYYN+KLK G+CS CKNG+N+ST+KLPYACKLLFQELQSMN+VPRLKLTE
Sbjct: 1091 AQVCRKCGLLGYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSMNIVPRLKLTE 1150

Query: 3558 A 3560
            A
Sbjct: 1151 A 1151


>ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella]
            gi|482548616|gb|EOA12810.1| hypothetical protein
            CARUB_v10025768mg [Capsella rubella]
          Length = 1160

 Score = 1749 bits (4531), Expect = 0.0
 Identities = 859/1151 (74%), Positives = 1001/1151 (86%), Gaps = 13/1151 (1%)
 Frame = +3

Query: 147  EDSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITS 326
            ++ I+++ L +P KS  DKFQL+PEFLKVRGLVKQHLDSFNY +N GI+KIV+AN +ITS
Sbjct: 14   DNFINKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYLINVGIKKIVKANCLITS 73

Query: 327  SIDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLT 506
            + DP IYL++  VR+G+P++   ++  +++P  CRL D TY+API VNIEY  GSH    
Sbjct: 74   TADPSIYLRFKAVRVGEPSILNINMAEQINPHMCRLADMTYAAPIHVNIEYVHGSHGEKQ 133

Query: 507  VATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 686
             + K +V IGR+PIMLRSC CVLN +DE ELARLGECPLDPGGYFV+KGTEKV+LIQEQL
Sbjct: 134  TSAKNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVIKGTEKVLLIQEQL 193

Query: 687  SKNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAM 866
            SKNRIIID D KG + ASVTSSTE  KSKTV   EKE+I + L+QF K  +PI++++KAM
Sbjct: 194  SKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIYLFLHQFVKK-IPIIIVLKAM 252

Query: 867  GMESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEK 1046
            GMESDQE+VQM+GRDPR+ A LLPSI+EC ++ V TQ+QAL+++E KVK+ S+    L+K
Sbjct: 253  GMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYG-PPLQK 311

Query: 1047 EGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLEL 1226
            +GRAL I+RD+FLA+VPVR+ +FR KC YV V+LRRM++A+LNKDA+DDKDYVGNKRLEL
Sbjct: 312  DGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLEL 371

Query: 1227 SGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGN 1406
            SGQ ISLLFEDLFKTM +E  K +D +L K++R+   D SQ L+ DII+ GLER +STGN
Sbjct: 372  SGQLISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLSGDIISLGLERTLSTGN 431

Query: 1407 WDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 1586
            +D+KRFRMHRKGMTQV+ RLSFI ++G +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCD
Sbjct: 432  FDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCD 491

Query: 1587 TPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNG 1766
            TPEGE+CGLVKNLALMTHVTTDEE+GPL+++C+ LGV DLE+LS EELH P+SFLV+ NG
Sbjct: 492  TPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNG 551

Query: 1767 LILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGI 1946
            LILGKHRRPQ+FAN++R+LRRAGKIGEFVSVF NEKQ C+Y+ASDGGRVCRPLVIADKGI
Sbjct: 552  LILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGI 611

Query: 1947 SRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPE---------- 2096
            SRVK+HHMKEL+ G+RTF+DF+ +GLIEYLDVNE+NNALIALYE +A  E          
Sbjct: 612  SRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATTELDEGGEAAKI 671

Query: 2097 ---TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLY 2267
               TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLY
Sbjct: 672  RADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLY 731

Query: 2268 LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 2447
            LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 732  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 791

Query: 2448 VMKKLTAINQKYANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSP 2627
            VMKK+ A +QKY NNT DRI+RPQR G +AE+MQILD+DG+A+PGEIIRP+D+YINKQSP
Sbjct: 792  VMKKIVATSQKYDNNTQDRILRPQRTGPDAEKMQILDNDGIASPGEIIRPNDVYINKQSP 851

Query: 2628 TNKEINVRSPAGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRP 2807
             + +  + +   L DS Y+ A + +KGP+GET VVDRVAL S+K ++LCIK++IRHTRRP
Sbjct: 852  VDTKNKMTTQ--LSDSQYRPAREYFKGPEGETQVVDRVALCSNKHDHLCIKYIIRHTRRP 909

Query: 2808 ELGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKA 2987
            ELGDKFSSRHGQKGVCGTIIQQEDFPFSE GICPDLIMNPHGFPSRMT+GKMIELLG KA
Sbjct: 910  ELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKA 969

Query: 2988 GVSSGRFHYGSAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGP 3167
            GVS GRFHYGSAFGE  GHAD+VE IS TLV  GFSYSGKD +YSGI+G PLQAYIFMGP
Sbjct: 970  GVSCGRFHYGSAFGERGGHADKVETISATLVNKGFSYSGKDLLYSGISGEPLQAYIFMGP 1029

Query: 3168 IYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFE 3347
            IYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+E
Sbjct: 1030 IYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYE 1089

Query: 3348 RLMISSDPFEVQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSM 3527
            RLM+SSDPFEVQVCRACGLLGYY++KLK   CSTCKNGDNI+TMKLPYACKLLFQELQSM
Sbjct: 1090 RLMVSSDPFEVQVCRACGLLGYYSYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSM 1149

Query: 3528 NVVPRLKLTEA 3560
            NVVPRLKL EA
Sbjct: 1150 NVVPRLKLIEA 1160


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score = 1746 bits (4522), Expect = 0.0
 Identities = 866/1083 (79%), Positives = 958/1083 (88%), Gaps = 24/1083 (2%)
 Frame = +3

Query: 384  VTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLTVATKKDVTIGRLPIMLRSC 563
            +TI+ V+ +++P  CRL+D TY+API VNIEY +GSH   T   K D+ IGR+PIMLRSC
Sbjct: 1    MTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSC 60

Query: 564  CCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDRDNKGLLIASV 743
            CCVL  +DEAELARLGECPLDPGGYFV+KG EKVILIQEQLSKNRIIID D KG + ASV
Sbjct: 61   CCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASV 120

Query: 744  TSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAMGMESDQEVVQMIGRDPRYG 923
            TSS+EA KSKTV   EKEKI + LNQF K  +PIMV+MKAMGMESDQEVVQM+GRDP Y 
Sbjct: 121  TSSSEATKSKTVIQMEKEKIYLLLNQFVKK-IPIMVVMKAMGMESDQEVVQMVGRDPHYN 179

Query: 924  ALLLPSIQECAAQNVYTQQQALEFMEKKVKRFSFSNASLEKEGRALSIIRDVFLANVPVR 1103
            A+LLPSI+ECA   +YTQ+QALE++E KVKR  ++  + EKEGRALSI+RDVFLANVPVR
Sbjct: 180  AVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVR 239

Query: 1104 ELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLELSGQHISLLFEDLFKTMNSE 1283
              +FRPKC+YVAV+LRRM++AILNKDA+DDKDYVGNKRLELSGQ ISLLFEDLFKT  SE
Sbjct: 240  SNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISE 299

Query: 1284 VKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNWDVKRFRMHRKGMTQVVA 1460
            V+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+D+KRF+MHRKGMTQV+A
Sbjct: 300  VQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLA 359

Query: 1461 RLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTH 1640
            RLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTH
Sbjct: 360  RLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTH 419

Query: 1641 VTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMFNGLILGKHRRPQFFANAIRK 1820
            VTTDE++GPLISLC+ LGVEDLELLSGEELH PNSFLV+ NGLILGKHRRPQ FA A+RK
Sbjct: 420  VTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRK 479

Query: 1821 LRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADKGISRVKEHHMKELKVGLRTF 2000
            LRRAGK+GEFVSVFVNEKQRC+YIASDGGRVCRPLVIADKG+SR+KEHHMKEL  G+RTF
Sbjct: 480  LRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTF 539

Query: 2001 NDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEPFTILGVCAGLIPFPHHNQSP 2180
            +DFL +GLIEYLDVNE+NNALIALYEGEA PETTHIEIEPFTILGVCAGLIP+PHHNQSP
Sbjct: 540  DDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSP 599

Query: 2181 RNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIELV------------- 2321
            RNTYQCAMGKQAMGNIAYNQLCRMD+LLYLLVYPQRPLLTTRTIELV             
Sbjct: 600  RNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVSGLYVVDYSTPFC 659

Query: 2322 ----------GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAI 2471
                      GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ +A+
Sbjct: 660  PVNCLLCFQVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAV 719

Query: 2472 NQKYANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVR 2651
            NQKY     DRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DIYINK+S  +   +  
Sbjct: 720  NQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRV 779

Query: 2652 SPAGLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSS 2831
            S   LPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL IKFLIRHTRRPE+GDKFSS
Sbjct: 780  SSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSS 839

Query: 2832 RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFH 3011
            RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFH
Sbjct: 840  RHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 899

Query: 3012 YGSAFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKH 3191
            YGSAFGEPSGHADRVE ISETL+KHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKH
Sbjct: 900  YGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 959

Query: 3192 MVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDP 3371
            MVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDP
Sbjct: 960  MVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDP 1019

Query: 3372 FEVQVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKL 3551
            FEVQVCR CGLLGYY+HKLK G+CS+CKNGDN+STMKLPYACKLL QELQSMN+VPRLKL
Sbjct: 1020 FEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKL 1079

Query: 3552 TEA 3560
            +EA
Sbjct: 1080 SEA 1082


>ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1149

 Score = 1739 bits (4503), Expect = 0.0
 Identities = 867/1140 (76%), Positives = 983/1140 (86%), Gaps = 3/1140 (0%)
 Frame = +3

Query: 150  DSIDEQFLESPAKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANNIITSS 329
            + ID+Q+L SP K++VDK+QL+PEFLKVRGLVKQHL SFNY V T IRKIVRAN+ I S+
Sbjct: 18   NGIDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIRKIVRANHEIRST 77

Query: 330  IDPRIYLKYTDVRIGKPTVTIDHVTSELSPQQCRLTDTTYSAPILVNIEYTKGSHNVLTV 509
             DP I+L+Y DVRIG+P++T D V  +LSPQ+CRL D TY+API V ++YT   +  +++
Sbjct: 78   RDPNIFLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVDYTMIRNGQISM 137

Query: 510  ATKKDVTIGRLPIMLRSCCCVLNMRDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLS 689
            AT+KDV IGR+PIMLRSC CVL  +DE +LA+LGECPLDPGGYFVV G EKVILIQEQLS
Sbjct: 138  ATQKDVVIGRMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFVVNGREKVILIQEQLS 197

Query: 690  KNRIIIDRDNKGLLIASVTSSTEAIKSKTVFIFEKEKINISLNQFNKPGVPIMVMMKAMG 869
            KNRIIID D KG + ASV  STE  KSKT+   EKEK+ + LN F K  VPIMV+MKAMG
Sbjct: 198  KNRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMF-KTKVPIMVVMKAMG 256

Query: 870  MESDQEVVQMIGRDPRYGALLLPSIQECAAQNVYTQQQALEFME--KKVKRFSFSNASLE 1043
            MESDQEVVQMIGRDPRY ALLLPSI+ECA   +YTQ QALEF+E  K  +  S+S   +E
Sbjct: 257  MESDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLENDKMFRMPSYSTGPVE 316

Query: 1044 KEGRALSIIRDVFLANVPVRELHFRPKCIYVAVILRRMMDAILNKDAVDDKDYVGNKRLE 1223
            K  RALSI+RD+FLA+VPV + +FR KCIYVAV++RRMM+AILNKDA+DDKDYVGNKRLE
Sbjct: 317  KGARALSILRDMFLAHVPVNQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLE 376

Query: 1224 LSGQHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLAR-DIITHGLERAIST 1400
            LSGQ +SLLFEDLFK+MN E ++  D      + S P D   H+ R + IT  L+RA+ST
Sbjct: 377  LSGQLLSLLFEDLFKSMNDEARREFD------AYSKPSDLLYHVKRSNRITVELQRALST 430

Query: 1401 GNWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 1580
            GNWD+KRFRMHRKGMT+V+ARLS+I T+G+MTKI PQFEKSRKVSGPRALQPSQ+GM+CP
Sbjct: 431  GNWDIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICP 490

Query: 1581 CDTPEGEACGLVKNLALMTHVTTDEEDGPLISLCHSLGVEDLELLSGEELHAPNSFLVMF 1760
            CDTPEGEACGLVKNLALMTHVTTDE++ P++SLC+ LGVEDLE LS  ELH PNS+L++ 
Sbjct: 491  CDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYDLGVEDLEQLSAAELHTPNSYLIIL 550

Query: 1761 NGLILGKHRRPQFFANAIRKLRRAGKIGEFVSVFVNEKQRCIYIASDGGRVCRPLVIADK 1940
            NGLILGKHR PQ FAN +RKLRRAG+I EFVS+FVN+KQ C+YIASDGGRVCRPLVIA+K
Sbjct: 551  NGLILGKHRSPQRFANGMRKLRRAGQIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEK 610

Query: 1941 GISRVKEHHMKELKVGLRTFNDFLCEGLIEYLDVNEQNNALIALYEGEAVPETTHIEIEP 2120
            G+SR+KE HM EL+ G+R FN FL +GLIEYLDVNE+NN+LIALYE EA P+TTHIEIEP
Sbjct: 611  GVSRIKELHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATPDTTHIEIEP 670

Query: 2121 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 2300
            FTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD LLYLLVYPQRPLLT
Sbjct: 671  FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLT 730

Query: 2301 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLTAINQK 2480
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK  A+ QK
Sbjct: 731  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKHAAMCQK 790

Query: 2481 YANNTMDRIIRPQRVGREAERMQILDDDGLAAPGEIIRPHDIYINKQSPTNKEINVRSPA 2660
            Y N T DR+I+PQR G EAER  ILDDDGLA+PGEIIR  DIYINK+SPT     V SP 
Sbjct: 791  YKNLTSDRLIKPQRQGYEAER--ILDDDGLASPGEIIRNGDIYINKESPTVTVATVTSPM 848

Query: 2661 GLPDSAYKSAIQTYKGPQGETAVVDRVALSSDKDNNLCIKFLIRHTRRPELGDKFSSRHG 2840
             LPDSAY+ + QTYKG +GE  V+DRVAL SD++NNL IKF+IR TRRPE+GDKFSSRHG
Sbjct: 849  DLPDSAYRLSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPEIGDKFSSRHG 908

Query: 2841 QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGS 3020
            QKGVCG I+QQED PFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGS
Sbjct: 909  QKGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGS 968

Query: 3021 AFGEPSGHADRVEVISETLVKHGFSYSGKDFIYSGITGSPLQAYIFMGPIYYQKLKHMVL 3200
            AFGEPSGHAD V+ ISETLVKHGF Y+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMV+
Sbjct: 969  AFGEPSGHADTVDAISETLVKHGFCYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVV 1028

Query: 3201 DKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEV 3380
            DKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I ERLM+SSDPFE 
Sbjct: 1029 DKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEA 1088

Query: 3381 QVCRACGLLGYYNHKLKAGVCSTCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 3560
            QVCR CGLLGYYN+KLK G+CS CKNG+N+STMKLPYACKLLFQELQSMN+VPRLKLTEA
Sbjct: 1089 QVCRKCGLLGYYNYKLKIGICSMCKNGENMSTMKLPYACKLLFQELQSMNIVPRLKLTEA 1148