BLASTX nr result
ID: Cocculus23_contig00013279
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00013279
(1186 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007014035.1| RING/U-box superfamily protein isoform 1 [Th... 248 4e-63
ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250... 246 2e-62
ref|XP_007205383.1| hypothetical protein PRUPE_ppa007335mg [Prun... 245 2e-62
emb|CBI16568.3| unnamed protein product [Vitis vinifera] 244 7e-62
ref|XP_002303979.2| zinc finger family protein [Populus trichoca... 242 3e-61
ref|XP_004502170.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 241 4e-61
ref|XP_006829824.1| hypothetical protein AMTR_s00119p00089020 [A... 236 1e-59
gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 233 1e-58
ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citr... 231 4e-58
ref|XP_007014039.1| RING/U-box superfamily protein, putative iso... 230 8e-58
ref|XP_003601604.1| RING finger protein [Medicago truncatula] gi... 229 2e-57
ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Popu... 229 2e-57
ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 228 4e-57
gb|ACU20614.1| unknown [Glycine max] 221 4e-55
ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutr... 221 5e-55
ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Caps... 218 5e-54
ref|XP_006348226.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 217 7e-54
ref|XP_006348225.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 217 7e-54
ref|XP_006348224.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 217 7e-54
ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyra... 217 9e-54
>ref|XP_007014035.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
gi|590580324|ref|XP_007014036.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|590580327|ref|XP_007014037.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|590580331|ref|XP_007014038.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784398|gb|EOY31654.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784399|gb|EOY31655.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784400|gb|EOY31656.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784401|gb|EOY31657.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
Length = 367
Score = 248 bits (633), Expect = 4e-63
Identities = 127/224 (56%), Positives = 148/224 (66%), Gaps = 6/224 (2%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLV--AXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDV 241
SS +L LLQG+R G+ A IL+NPFNQ II++GS+D
Sbjct: 118 SSATILQLLQGIRDGMASEAENSENDRDRDTSRDRDRERERVILINPFNQTIIVQGSYDS 177
Query: 242 NRN-QNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEEN 418
N+ QNQN GSLGDY +GPGLDLLLQHL ENDPNR+G+PPA+KEA+EAMPTVKIEEN
Sbjct: 178 NQGGQNQNSNHIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAIEAMPTVKIEEN 237
Query: 419 LQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXX 598
LQCSVCLDDFE G+EA+EMPCKHKFH+GCILPWL+LHSSCPVCR++MPA E
Sbjct: 238 LQCSVCLDDFEAGSEAREMPCKHKFHSGCILPWLELHSSCPVCRYQMPADESKLDTERPR 297
Query: 599 XXXXXXXXXXXXXXXXTD---DGEDGNGRRTWLSIPWPFNGLFS 721
+ DG G+GRR S PWPFNGLFS
Sbjct: 298 NNTNQRESENNVHGSGEEGEGDGRSGSGRR--FSFPWPFNGLFS 339
>ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
vinifera] gi|225435818|ref|XP_002285766.1| PREDICTED:
uncharacterized protein LOC100250148 isoform 2 [Vitis
vinifera]
Length = 368
Score = 246 bits (627), Expect = 2e-62
Identities = 125/224 (55%), Positives = 148/224 (66%), Gaps = 6/224 (2%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX--ILVNPFNQAIILEGSFDV 241
SS +L LLQG+RAG+V+ IL+NPFNQ II++GSFD
Sbjct: 119 SSATILQLLQGIRAGMVSESENSENDRDRDRDRERERERERLILINPFNQTIIVQGSFDS 178
Query: 242 NRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENL 421
N+ QNQNQ GSLGDY IGP LDLLLQHL ENDPNR+G+PPA+K+A+EAMPTVKI+ENL
Sbjct: 179 NQAQNQNQNTIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENL 238
Query: 422 QCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXX 601
QCSVCLDDFE GAEA+EMPCKHKFH+GCILPWL+LHSSCPVCRF++ A E
Sbjct: 239 QCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPN 298
Query: 602 XXXXXXXXXXXXXXXTD----DGEDGNGRRTWLSIPWPFNGLFS 721
++ DG GNGRR+ + WPF LFS
Sbjct: 299 VSSNSSERSNNGHGSSEEGDGDGRSGNGRRS--TFRWPFTSLFS 340
>ref|XP_007205383.1| hypothetical protein PRUPE_ppa007335mg [Prunus persica]
gi|462401025|gb|EMJ06582.1| hypothetical protein
PRUPE_ppa007335mg [Prunus persica]
Length = 372
Score = 245 bits (626), Expect = 2e-62
Identities = 126/228 (55%), Positives = 147/228 (64%), Gaps = 10/228 (4%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX------ILVNPFNQAIILEG 229
+S +L LLQG+RAG + IL+NPF+Q II++G
Sbjct: 116 NSATILQLLQGIRAGSASESENSESDRDRDRDRDRERERERERERVILINPFSQTIIVQG 175
Query: 230 SFDVNRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKI 409
S+D N+ QN N T GSLGDY IGPGLDLLLQHL ENDPNR+G+PPA+KEAVEA+PTV I
Sbjct: 176 SYDSNQGQNNNHTPMGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTI 235
Query: 410 EENLQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVE----EX 577
+ENLQCSVCLDDFE G EAKEMPCKHKFH+GCILPWL+LHSSCPVCRF++PA E
Sbjct: 236 KENLQCSVCLDDFEAGVEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKRDSD 295
Query: 578 XXXXXXXXXXXXXXXXXXXXXXXTDDGEDGNGRRTWLSIPWPFNGLFS 721
DG +G+GRR SIPWPFNGLFS
Sbjct: 296 NSRNSSDQRESENIGGDGGGVEGDGDGRNGSGRR--FSIPWPFNGLFS 341
>emb|CBI16568.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 244 bits (622), Expect = 7e-62
Identities = 124/222 (55%), Positives = 146/222 (65%), Gaps = 4/222 (1%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDVNR 247
SS +L LLQG+RAG+ IL+NPFNQ II++GSFD N+
Sbjct: 97 SSATILQLLQGIRAGM----------------------RLILINPFNQTIIVQGSFDSNQ 134
Query: 248 NQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENLQC 427
QNQNQ GSLGDY IGP LDLLLQHL ENDPNR+G+PPA+K+A+EAMPTVKI+ENLQC
Sbjct: 135 AQNQNQNTIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQC 194
Query: 428 SVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXXXX 607
SVCLDDFE GAEA+EMPCKHKFH+GCILPWL+LHSSCPVCRF++ A E
Sbjct: 195 SVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPNVS 254
Query: 608 XXXXXXXXXXXXXTD----DGEDGNGRRTWLSIPWPFNGLFS 721
++ DG GNGRR+ + WPF LFS
Sbjct: 255 SNSSERSNNGHGSSEEGDGDGRSGNGRRS--TFRWPFTSLFS 294
>ref|XP_002303979.2| zinc finger family protein [Populus trichocarpa]
gi|550343656|gb|EEE78958.2| zinc finger family protein
[Populus trichocarpa]
Length = 388
Score = 242 bits (617), Expect = 3e-61
Identities = 123/231 (53%), Positives = 148/231 (64%), Gaps = 13/231 (5%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLV---AXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFD 238
+S +L LLQG+RAG++ + IL+NPFNQ+II++GS+D
Sbjct: 129 NSATILQLLQGIRAGILVSESENLEGDRDRDRVRDMNRERERVILINPFNQSIIVQGSYD 188
Query: 239 VNRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEEN 418
N QNQNQ A GSLGDY+IGPGLDLLLQHL ENDPNR+G+PPA+KEA+EA+PTV ++E
Sbjct: 189 SNNVQNQNQNAIGSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTVKEP 248
Query: 419 LQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXX 598
LQCSVCLDDFE GAEA+EMPCKHKFH+GCILPWL+LHSSCPVCR ++PA E
Sbjct: 249 LQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERSR 308
Query: 599 XXXXXXXXXXXXXXXXTD----------DGEDGNGRRTWLSIPWPFNGLFS 721
+G GNGRR S PWPFN LFS
Sbjct: 309 NTFDQRDSESTNSESNISNGINVEEGDGEGRSGNGRR--FSFPWPFNSLFS 357
>ref|XP_004502170.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Cicer
arietinum] gi|502134582|ref|XP_004502171.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X2 [Cicer
arietinum]
Length = 367
Score = 241 bits (615), Expect = 4e-61
Identities = 122/221 (55%), Positives = 142/221 (64%), Gaps = 3/221 (1%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDVNR 247
SS + LLQG+RAGL + IL+NPFNQ II++GS+D NR
Sbjct: 126 SSATIQQLLQGIRAGLTSESHENTDSDDHVREREREREHVILINPFNQTIIVQGSYDSNR 185
Query: 248 NQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENLQC 427
+Q+ + GSLGDY +GPGLDLLLQHL ENDPNR+G+PPA KEAVEA+PTVKI ENLQC
Sbjct: 186 DQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQC 245
Query: 428 SVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXXXX 607
SVCLDDFE G+EAKEMPCKH+FH+ CILPWL+LHSSCPVCRF++ A E
Sbjct: 246 SVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSR 305
Query: 608 XXXXXXXXXXXXXTDDGEDGN---GRRTWLSIPWPFNGLFS 721
D E N GRR S PWPFNGLFS
Sbjct: 306 NQREDENTVHDNAEGDNEGRNSSGGRR--FSFPWPFNGLFS 344
>ref|XP_006829824.1| hypothetical protein AMTR_s00119p00089020 [Amborella trichopoda]
gi|548835405|gb|ERM97240.1| hypothetical protein
AMTR_s00119p00089020 [Amborella trichopoda]
Length = 337
Score = 236 bits (603), Expect = 1e-59
Identities = 121/225 (53%), Positives = 144/225 (64%), Gaps = 6/225 (2%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDVNR 247
+STA+L LLQ LR G+ IL+NP NQAIIL+GSFD N
Sbjct: 103 NSTAILQLLQSLRNGIAESENQDGERERGV----------ILINPLNQAIILQGSFDANP 152
Query: 248 NQNQNQTAPGS------LGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKI 409
NQN GS LGDY+IGPGLDLLLQHL ENDPNR+G+PPA KEAVEA+PTVK
Sbjct: 153 IPNQNNDQTGSTNIGSSLGDYVIGPGLDLLLQHLAENDPNRYGTPPATKEAVEALPTVKT 212
Query: 410 EENLQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXX 589
E+ +CS+C++DFE GAEA+E+PCKHKFH+GCILPWL+LHSSCPVCRF++PA E
Sbjct: 213 GESERCSICIEDFEVGAEARELPCKHKFHSGCILPWLELHSSCPVCRFQLPADES----- 267
Query: 590 XXXXXXXXXXXXXXXXXXXTDDGEDGNGRRTWLSIPWPFNGLFSL 724
+GE N RR W+ +PWPFNGLFSL
Sbjct: 268 KLPQGTGTNSSNGGDGGEQNGEGERENNRRFWVPVPWPFNGLFSL 312
>gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 381
Score = 233 bits (594), Expect = 1e-58
Identities = 121/227 (53%), Positives = 144/227 (63%), Gaps = 9/227 (3%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDVNR 247
SS +L LLQG+RAGL A IL+NPFNQ ++++G
Sbjct: 132 SSATILQLLQGIRAGL-ASESQNSESFRDGDRERDERERVILINPFNQTVLVQG------ 184
Query: 248 NQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENLQC 427
QN+NQ GSLGDY IGPGLD+LLQHL ENDPNR+G+PPA+KEAVEA+PTV I+ENLQC
Sbjct: 185 -QNENQNPIGSLGDYFIGPGLDMLLQHLAENDPNRYGTPPAQKEAVEALPTVAIKENLQC 243
Query: 428 SVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXXXX 607
SVCLDDFE GA+AKEMPCKHKFH GCILPWL+LHSSCPVCRF++P+ E
Sbjct: 244 SVCLDDFEIGADAKEMPCKHKFHNGCILPWLELHSSCPVCRFQLPSNESKRDSDGTRNAN 303
Query: 608 XXXXXXXXXXXXXTD---------DGEDGNGRRTWLSIPWPFNGLFS 721
+ DG +G+GRR S PWPF+GLFS
Sbjct: 304 VERAMNMISSENNSSANGGDEGDGDGRNGSGRR--FSFPWPFSGLFS 348
>ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citrus clementina]
gi|568871578|ref|XP_006488959.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like [Citrus sinensis]
gi|557548167|gb|ESR58796.1| hypothetical protein
CICLE_v10015642mg [Citrus clementina]
Length = 375
Score = 231 bits (590), Expect = 4e-58
Identities = 125/235 (53%), Positives = 146/235 (62%), Gaps = 17/235 (7%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX---------ILVNPFNQAII 220
+S A+L LLQGLRAGL + IL+NPFNQ II
Sbjct: 116 NSAAILQLLQGLRAGLQSESEDNDNDRERDRDRGDRDRDRDRESERERVILINPFNQTII 175
Query: 221 LEGSFDVNRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPT 400
++G ++QN N T GSLGDY +GPGLDLLLQHL ENDPNR+G+PPA+KEAVEAMP+
Sbjct: 176 VQGGSYDGQHQNHNHTPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVEAMPS 235
Query: 401 VKIEENLQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVE--- 571
VKIEE LQCSVCLDDFE G EAKEMPCKHKFH+ CILPWL+LHSSCPVCR ++PA E
Sbjct: 236 VKIEETLQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPADEFKP 295
Query: 572 --EXXXXXXXXXXXXXXXXXXXXXXXXTDDGEDGNGRR---TWLSIPWPFNGLFS 721
E +++G DG GR + SIPWPFNGLFS
Sbjct: 296 ESERSRNSSNHQREHEHHSSDHGTHASSEEG-DGEGRNESGSRFSIPWPFNGLFS 349
>ref|XP_007014039.1| RING/U-box superfamily protein, putative isoform 5, partial
[Theobroma cacao] gi|508784402|gb|EOY31658.1| RING/U-box
superfamily protein, putative isoform 5, partial
[Theobroma cacao]
Length = 310
Score = 230 bits (587), Expect = 8e-58
Identities = 111/171 (64%), Positives = 130/171 (76%), Gaps = 3/171 (1%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLV--AXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDV 241
SS +L LLQG+R G+ A IL+NPFNQ II++GS+D
Sbjct: 118 SSATILQLLQGIRDGMASEAENSENDRDRDTSRDRDRERERVILINPFNQTIIVQGSYDS 177
Query: 242 NRN-QNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEEN 418
N+ QNQN GSLGDY +GPGLDLLLQHL ENDPNR+G+PPA+KEA+EAMPTVKIEEN
Sbjct: 178 NQGGQNQNSNHIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAIEAMPTVKIEEN 237
Query: 419 LQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVE 571
LQCSVCLDDFE G+EA+EMPCKHKFH+GCILPWL+LHSSCPVCR++MPA E
Sbjct: 238 LQCSVCLDDFEAGSEAREMPCKHKFHSGCILPWLELHSSCPVCRYQMPADE 288
>ref|XP_003601604.1| RING finger protein [Medicago truncatula]
gi|355490652|gb|AES71855.1| RING finger protein
[Medicago truncatula]
Length = 352
Score = 229 bits (584), Expect = 2e-57
Identities = 117/223 (52%), Positives = 140/223 (62%), Gaps = 5/223 (2%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDVNR 247
SS + LLQG+RAGL + IL+NPFNQ II++GS+D NR
Sbjct: 116 SSATIQQLLQGIRAGLTSESHENTDSDDRVREREREHV--ILINPFNQTIIVQGSYDSNR 173
Query: 248 NQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENLQC 427
+Q+ N G+LGDY +GPGLDLLLQHL ENDPNR+G+PPA KEAVE++PTVKI ENLQC
Sbjct: 174 DQSDNHNPIGALGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVESLPTVKINENLQC 233
Query: 428 SVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXXXX 607
SVCLDDFE G+EAKEMPCKH+FH+ CILPWL+LHSSCPVCR ++ E
Sbjct: 234 SVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEPKQDSDVSRNHR 293
Query: 608 XXXXXXXXXXXXXTDDGED-----GNGRRTWLSIPWPFNGLFS 721
+G+ GRR S PWPFNGLFS
Sbjct: 294 NQRDDEIIGHANANAEGDSEGRSPSGGRR--FSFPWPFNGLFS 334
>ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Populus trichocarpa]
gi|550346456|gb|EEE82420.2| hypothetical protein
POPTR_0001s03880g [Populus trichocarpa]
Length = 382
Score = 229 bits (583), Expect = 2e-57
Identities = 117/229 (51%), Positives = 142/229 (62%), Gaps = 11/229 (4%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX---ILVNPFNQAIILEGSFD 238
SS +L LLQG+RAG++A IL+NPFNQ II++GS+D
Sbjct: 121 SSATILQLLQGIRAGILASESENSEGDRDGERDRDRDRDRERVILINPFNQNIIVQGSYD 180
Query: 239 VNRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEEN 418
N ++NQNQ GS GDY IGPGLDLLLQHL +NDPNR+G+ PA+KEAVEA+PTV I+E
Sbjct: 181 SNNDENQNQNPVGSFGDYFIGPGLDLLLQHLADNDPNRYGTLPAQKEAVEALPTVIIKEP 240
Query: 419 LQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXX 598
LQCSVCLDDFE G++A+EMPCKHKFH+GCILPWL+LHSSCPVCR ++PA E
Sbjct: 241 LQCSVCLDDFEIGSKAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERAR 300
Query: 599 XXXXXXXXXXXXXXXXTD--------DGEDGNGRRTWLSIPWPFNGLFS 721
D E+ +G S PWPFN LFS
Sbjct: 301 NSSDRREFENTNSESNISHGISVEEGDSEERSGNGRSFSFPWPFNSLFS 349
>ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470117588|ref|XP_004294936.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470117590|ref|XP_004294937.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 375
Score = 228 bits (581), Expect = 4e-57
Identities = 122/227 (53%), Positives = 140/227 (61%), Gaps = 9/227 (3%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX---ILVNPFNQAIILEGSFD 238
SS+ +L LL+G+RA +A IL+NPFNQ IIL GS+D
Sbjct: 118 SSSTILQLLRGIRAAGLASESDNSETDRDRDRDRDRERERERLILINPFNQTIILHGSYD 177
Query: 239 VNRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEEN 418
++ QN N T GSLGDY IGPGLDLLLQHL ENDPNR+G+PPAKKEAVE +PTV ++EN
Sbjct: 178 SSQGQNNNHTPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAKKEAVEGLPTVTVKEN 237
Query: 419 LQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXX 598
LQCSVCLDD E G EAKEMPCKHKFH CILPWL+LHSSCPVCRF +PA E
Sbjct: 238 LQCSVCLDDLEIGVEAKEMPCKHKFHGECILPWLELHSSCPVCRFLLPADEAKCDSNNSR 297
Query: 599 XXXXXXXXXXXXXXXXTDD------GEDGNGRRTWLSIPWPFNGLFS 721
D G +G+GRR IPWPFN LFS
Sbjct: 298 NSSNQSDGENIDGDGEEGDVDGDGIGRNGSGRR--FQIPWPFN-LFS 341
>gb|ACU20614.1| unknown [Glycine max]
Length = 188
Score = 221 bits (564), Expect = 4e-55
Identities = 104/182 (57%), Positives = 127/182 (69%), Gaps = 4/182 (2%)
Frame = +2
Query: 188 ILVNPFNQAIILEGSFDVNRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPP 367
IL+NP NQ II++GS++ NR+++ N ++ GSLGDY GPG D+LLQHL ENDPNR+G+PP
Sbjct: 2 ILINPLNQTIIVQGSYESNRDRSDNHSSVGSLGDYFTGPGFDILLQHLAENDPNRYGTPP 61
Query: 368 AKKEAVEAMPTVKIEENLQCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVC 547
A+KEA+EA+PTV I EN QCSVCLDDFE G+EAKEMPCKH+FH+GCILPWL+LHSSCPVC
Sbjct: 62 AQKEAIEALPTVIINENSQCSVCLDDFEVGSEAKEMPCKHRFHSGCILPWLELHSSCPVC 121
Query: 548 RFEMPAVEEXXXXXXXXXXXXXXXXXXXXXXXXTDDGEDGNGRRT----WLSIPWPFNGL 715
R ++P E D+ DG GR S PWPFNGL
Sbjct: 122 RLQLPLDES--KQDSDLSRDSRSQREDESIEHDNDEERDGEGRNASGGRRFSFPWPFNGL 179
Query: 716 FS 721
FS
Sbjct: 180 FS 181
>ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutrema salsugineum]
gi|557102434|gb|ESQ42797.1| hypothetical protein
EUTSA_v10013831mg [Eutrema salsugineum]
Length = 378
Score = 221 bits (563), Expect = 5e-55
Identities = 117/231 (50%), Positives = 139/231 (60%), Gaps = 13/231 (5%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDVNR 247
SS + LLQG+RAG+ + I++NPFNQ+++++GS
Sbjct: 144 SSGNIAQLLQGIRAGIASEYESSDNNNGERDSNSNRV---IMINPFNQSLVVQGS----S 196
Query: 248 NQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENLQC 427
NQ N +A SLGDY IGPGLDLLLQHL ENDPNR G+PPA+KEAVEA+PTVKI E LQC
Sbjct: 197 NQTHNHSALTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPLQC 256
Query: 428 SVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXXXX 607
SVCLDDFE G EAKEMPCKHKFH CI+PWL+LHSSCPVCRFE+P+ +
Sbjct: 257 SVCLDDFEKGTEAKEMPCKHKFHVPCIVPWLELHSSCPVCRFELPSANDDDDEVKVESDR 316
Query: 608 XXXXXXXXXXXXXT-------------DDGEDGNGRRTWLSIPWPFNGLFS 721
+ DD GNGRR S PWPF+GLFS
Sbjct: 317 PARTRALPESNSRSVAENVGNAERGREDDARSGNGRR--FSFPWPFSGLFS 365
>ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Capsella rubella]
gi|482548195|gb|EOA12389.1| hypothetical protein
CARUB_v10026533mg [Capsella rubella]
Length = 399
Score = 218 bits (554), Expect = 5e-54
Identities = 115/232 (49%), Positives = 139/232 (59%), Gaps = 14/232 (6%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX-ILVNPFNQAIILEGSFDVN 244
SS +L LLQG+RAG+ + I++NP+NQ+++++GS D
Sbjct: 145 SSGNILQLLQGIRAGIASEYESSDNNWESSGERDGNINNRVIMINPYNQSVVVQGSSD-- 202
Query: 245 RNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENLQ 424
+ QN + SLGDY IGPGLDLLLQHL ENDPNR G+PPA+KEAVEA+PTVKI E LQ
Sbjct: 203 --RTQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPLQ 260
Query: 425 CSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXXX 604
CSVCLDDFE G EAKE+PCKHKFH CI+PWL+LHSSCPVCRFE+P+ +
Sbjct: 261 CSVCLDDFEKGTEAKELPCKHKFHIRCIVPWLELHSSCPVCRFELPSTADDDDETKTDSE 320
Query: 605 XXXXXXXXXXXXXXT-------------DDGEDGNGRRTWLSIPWPFNGLFS 721
DD GNGRR S PWPF+GLFS
Sbjct: 321 RPPRTRIVRETNNRNVVENVGNAERGREDDARSGNGRR--FSFPWPFSGLFS 370
>ref|XP_006348226.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X3
[Solanum tuberosum] gi|565362992|ref|XP_006348227.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X4 [Solanum tuberosum]
gi|565362994|ref|XP_006348228.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X5 [Solanum
tuberosum]
Length = 360
Score = 217 bits (553), Expect = 7e-54
Identities = 112/224 (50%), Positives = 140/224 (62%), Gaps = 6/224 (2%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX--ILVNPFNQAIILEGSFDV 241
+S +L LLQG+RAG++A IL+NPFNQ II++GS +
Sbjct: 113 NSATILQLLQGIRAGMLAESENPNPDNENRETGRESRDRERVILINPFNQTIIVQGSDNN 172
Query: 242 NRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENL 421
+RNQ GSLGDY IGPGLD+LLQHL ENDPNR+G+PPA+KE VEA+P V I+E L
Sbjct: 173 SRNQ-----PIGSLGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVEALPVVTIDETL 227
Query: 422 QCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPA----VEEXXXXX 589
QCSVCL+DFE G EAKEMPCKH+FH CILPWL+LHS+CPVCR ++P+ VE
Sbjct: 228 QCSVCLEDFEIGTEAKEMPCKHRFHGDCILPWLELHSTCPVCRHQLPSDESKVESAGTND 287
Query: 590 XXXXXXXXXXXXXXXXXXXTDDGEDGNGRRTWLSIPWPFNGLFS 721
+D + NGRR +S+PWP +GLFS
Sbjct: 288 GSGSNTNAQSSNGNGRRYEDEDTRNENGRRFPVSLPWPLSGLFS 331
>ref|XP_006348225.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2
[Solanum tuberosum]
Length = 378
Score = 217 bits (553), Expect = 7e-54
Identities = 112/224 (50%), Positives = 140/224 (62%), Gaps = 6/224 (2%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX--ILVNPFNQAIILEGSFDV 241
+S +L LLQG+RAG++A IL+NPFNQ II++GS +
Sbjct: 131 NSATILQLLQGIRAGMLAESENPNPDNENRETGRESRDRERVILINPFNQTIIVQGSDNN 190
Query: 242 NRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENL 421
+RNQ GSLGDY IGPGLD+LLQHL ENDPNR+G+PPA+KE VEA+P V I+E L
Sbjct: 191 SRNQ-----PIGSLGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVEALPVVTIDETL 245
Query: 422 QCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPA----VEEXXXXX 589
QCSVCL+DFE G EAKEMPCKH+FH CILPWL+LHS+CPVCR ++P+ VE
Sbjct: 246 QCSVCLEDFEIGTEAKEMPCKHRFHGDCILPWLELHSTCPVCRHQLPSDESKVESAGTND 305
Query: 590 XXXXXXXXXXXXXXXXXXXTDDGEDGNGRRTWLSIPWPFNGLFS 721
+D + NGRR +S+PWP +GLFS
Sbjct: 306 GSGSNTNAQSSNGNGRRYEDEDTRNENGRRFPVSLPWPLSGLFS 349
>ref|XP_006348224.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Solanum tuberosum]
Length = 395
Score = 217 bits (553), Expect = 7e-54
Identities = 112/224 (50%), Positives = 140/224 (62%), Gaps = 6/224 (2%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXX--ILVNPFNQAIILEGSFDV 241
+S +L LLQG+RAG++A IL+NPFNQ II++GS +
Sbjct: 148 NSATILQLLQGIRAGMLAESENPNPDNENRETGRESRDRERVILINPFNQTIIVQGSDNN 207
Query: 242 NRNQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENL 421
+RNQ GSLGDY IGPGLD+LLQHL ENDPNR+G+PPA+KE VEA+P V I+E L
Sbjct: 208 SRNQ-----PIGSLGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVEALPVVTIDETL 262
Query: 422 QCSVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPA----VEEXXXXX 589
QCSVCL+DFE G EAKEMPCKH+FH CILPWL+LHS+CPVCR ++P+ VE
Sbjct: 263 QCSVCLEDFEIGTEAKEMPCKHRFHGDCILPWLELHSTCPVCRHQLPSDESKVESAGTND 322
Query: 590 XXXXXXXXXXXXXXXXXXXTDDGEDGNGRRTWLSIPWPFNGLFS 721
+D + NGRR +S+PWP +GLFS
Sbjct: 323 GSGSNTNAQSSNGNGRRYEDEDTRNENGRRFPVSLPWPLSGLFS 366
>ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310286|gb|EFH40710.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 217 bits (552), Expect = 9e-54
Identities = 115/231 (49%), Positives = 139/231 (60%), Gaps = 13/231 (5%)
Frame = +2
Query: 68 SSTAVLHLLQGLRAGLVAXXXXXXXXXXXXXXXXXXXXXXILVNPFNQAIILEGSFDVNR 247
SS +L LLQG+RAG+ + I++NP+NQ+++++GS D
Sbjct: 146 SSGNILQLLQGIRAGIASEYESSDNDWDNSRERDRV----IMINPYNQSLVVQGSSD--- 198
Query: 248 NQNQNQTAPGSLGDYLIGPGLDLLLQHLVENDPNRHGSPPAKKEAVEAMPTVKIEENLQC 427
QN N + SLGDY IGPGLDLLLQHL ENDPNR G+PPA+KEAVEA+PTVKI E LQC
Sbjct: 199 -QNPNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPLQC 257
Query: 428 SVCLDDFEFGAEAKEMPCKHKFHAGCILPWLQLHSSCPVCRFEMPAVEEXXXXXXXXXXX 607
SVCLDDFE G EAKE+PCKHKFH CI+PWL+LHSSCPVCRFE+P+ +
Sbjct: 258 SVCLDDFEKGTEAKELPCKHKFHIRCIVPWLELHSSCPVCRFELPSSADDDDETKIDSER 317
Query: 608 XXXXXXXXXXXXXT-------------DDGEDGNGRRTWLSIPWPFNGLFS 721
D+ GNGRR S PWPF+GLFS
Sbjct: 318 PPRTRNVGESNNRNIVENVGNAERGRQDEARSGNGRR--FSFPWPFSGLFS 366