BLASTX nr result
ID: Cocculus23_contig00013254
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00013254
(246 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006466768.1| PREDICTED: splicing factor U2af large subuni... 119 3e-25
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni... 119 3e-25
ref|XP_006466765.1| PREDICTED: splicing factor U2af large subuni... 119 3e-25
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni... 119 3e-25
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr... 119 3e-25
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr... 119 3e-25
ref|XP_003598047.1| Splicing factor U2af large subunit B [Medica... 115 8e-24
ref|XP_003589450.1| Splicing factor U2af large subunit B [Medica... 115 8e-24
ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Popu... 114 1e-23
ref|XP_004499573.1| PREDICTED: splicing factor U2af large subuni... 114 1e-23
ref|XP_004499572.1| PREDICTED: splicing factor U2af large subuni... 114 1e-23
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni... 114 1e-23
emb|CBI17547.3| unnamed protein product [Vitis vinifera] 114 1e-23
ref|XP_006363146.1| PREDICTED: splicing factor U2af large subuni... 114 1e-23
ref|XP_006363145.1| PREDICTED: splicing factor U2af large subuni... 114 1e-23
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera] 114 1e-23
sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large... 114 1e-23
ref|XP_006582439.1| PREDICTED: splicing factor U2af large subuni... 114 2e-23
ref|XP_006582437.1| PREDICTED: splicing factor U2af large subuni... 114 2e-23
ref|XP_004232384.1| PREDICTED: splicing factor U2af large subuni... 114 2e-23
>ref|XP_006466768.1| PREDICTED: splicing factor U2af large subunit B-like isoform X6
[Citrus sinensis]
Length = 368
Score = 119 bits (299), Expect = 3e-25
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L +++IPRP NGE +PGVGKVFLEY+D+DGA KAR G+NGRKFGGNQVVAVFYPENK
Sbjct: 301 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENK 360
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 361 FAQGDYEG 368
>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
[Citrus sinensis]
Length = 380
Score = 119 bits (299), Expect = 3e-25
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L +++IPRP NGE +PGVGKVFLEY+D+DGA KAR G+NGRKFGGNQVVAVFYPENK
Sbjct: 313 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENK 372
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 373 FAQGDYEG 380
>ref|XP_006466765.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Citrus sinensis] gi|568824768|ref|XP_006466766.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X4 [Citrus sinensis]
Length = 394
Score = 119 bits (299), Expect = 3e-25
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L +++IPRP NGE +PGVGKVFLEY+D+DGA KAR G+NGRKFGGNQVVAVFYPENK
Sbjct: 327 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENK 386
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 387 FAQGDYEG 394
>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Citrus sinensis]
Length = 581
Score = 119 bits (299), Expect = 3e-25
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L +++IPRP NGE +PGVGKVFLEY+D+DGA KAR G+NGRKFGGNQVVAVFYPENK
Sbjct: 514 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENK 573
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 574 FAQGDYEG 581
>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
gi|557527705|gb|ESR38955.1| hypothetical protein
CICLE_v10025221mg [Citrus clementina]
Length = 592
Score = 119 bits (299), Expect = 3e-25
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L +++IPRP NGE +PGVGKVFLEY+D+DGA KAR G+NGRKFGGNQVVAVFYPENK
Sbjct: 525 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENK 584
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 585 FAQGDYEG 592
>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X1 [Citrus
sinensis] gi|557527704|gb|ESR38954.1| hypothetical
protein CICLE_v10025221mg [Citrus clementina]
Length = 593
Score = 119 bits (299), Expect = 3e-25
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L +++IPRP NGE +PGVGKVFLEY+D+DGA KAR G+NGRKFGGNQVVAVFYPENK
Sbjct: 526 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENK 585
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 586 FAQGDYEG 593
>ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large
subunit B [Medicago truncatula]
Length = 626
Score = 115 bits (287), Expect = 8e-24
Identities = 51/68 (75%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++VIPRP +GE PGVGKVFLEY+D+DG+ KAR+GLNGRKFGGNQV+AVFYPENK
Sbjct: 559 GNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENK 618
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 619 FAQGDYEG 626
>ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large
subunit B [Medicago truncatula]
Length = 611
Score = 115 bits (287), Expect = 8e-24
Identities = 51/68 (75%), Positives = 61/68 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++VIPRP +GE PGVGKVFLEY+D+DG+ KAR+GLNGRKFGGNQV+AVFYPENK
Sbjct: 544 GNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENK 603
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 604 FAQGDYEG 611
>ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Populus trichocarpa]
gi|550338812|gb|ERP61027.1| hypothetical protein
POPTR_0005s12700g [Populus trichocarpa]
Length = 588
Score = 114 bits (286), Expect = 1e-23
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++VIPRP NGE APGVGKVFLEY+D +G++KARAG+NGRKF GNQVVAVFYPENK
Sbjct: 521 GQLVNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKARAGMNGRKFDGNQVVAVFYPENK 580
Query: 181 FSQGDYD 201
FSQG+YD
Sbjct: 581 FSQGEYD 587
>ref|XP_004499573.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Cicer arietinum]
Length = 621
Score = 114 bits (286), Expect = 1e-23
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++VIPRP +GE PGVGKVFLEY+D+DG+ KAR GLNGRKFGGNQV+AVFYPENK
Sbjct: 554 GNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARGGLNGRKFGGNQVIAVFYPENK 613
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 614 FAQGDYEG 621
>ref|XP_004499572.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Cicer arietinum]
Length = 623
Score = 114 bits (286), Expect = 1e-23
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++VIPRP +GE PGVGKVFLEY+D+DG+ KAR GLNGRKFGGNQV+AVFYPENK
Sbjct: 556 GNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARGGLNGRKFGGNQVIAVFYPENK 615
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 616 FAQGDYEG 623
>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 114 bits (286), Expect = 1e-23
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++ IPRP NGE PG+GKVFLEY+D+DGA KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 501 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 560
Query: 181 FSQGDYDG 204
FSQG+YDG
Sbjct: 561 FSQGEYDG 568
>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 114 bits (286), Expect = 1e-23
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++ IPRP NGE PG+GKVFLEY+D+DGA KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 326 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENK 385
Query: 181 FSQGDYDG 204
FSQG+YDG
Sbjct: 386 FSQGEYDG 393
>ref|XP_006363146.1| PREDICTED: splicing factor U2af large subunit A-like isoform X2
[Solanum tuberosum]
Length = 367
Score = 114 bits (285), Expect = 1e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
GAL ++VIPRP NGE PG+GKVFLEY+D+D ++KAR GLNGRKFGGNQVVAVFYPENK
Sbjct: 300 GALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVVAVFYPENK 359
Query: 181 FSQGDYD 201
FS+GDY+
Sbjct: 360 FSEGDYE 366
>ref|XP_006363145.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
[Solanum tuberosum]
Length = 556
Score = 114 bits (285), Expect = 1e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
GAL ++VIPRP NGE PG+GKVFLEY+D+D ++KAR GLNGRKFGGNQVVAVFYPENK
Sbjct: 489 GALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVVAVFYPENK 548
Query: 181 FSQGDYD 201
FS+GDY+
Sbjct: 549 FSEGDYE 555
>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 114 bits (285), Expect = 1e-23
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++ IPRP NGE PG+GKVFLEY+D+DGA KAR GLNGRKF GNQVVAVFYPENK
Sbjct: 498 GNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVFYPENK 557
Query: 181 FSQGDYDG 204
FSQG+YDG
Sbjct: 558 FSQGEYDG 565
>sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 555
Score = 114 bits (285), Expect = 1e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
GAL ++VIPRP NG PG+GKVFLEY+D+DG++KAR GLNGRKFGGNQVVAVFYPENK
Sbjct: 488 GALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENK 547
Query: 181 FSQGDYD 201
FS+GDY+
Sbjct: 548 FSEGDYE 554
>ref|XP_006582439.1| PREDICTED: splicing factor U2af large subunit B-like isoform X4
[Glycine max]
Length = 372
Score = 114 bits (284), Expect = 2e-23
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++VIPRP +GE A GVGKVFLEY D+DGA KARAGLNGRKF GNQVVAVFYPENK
Sbjct: 305 GTLVNVVIPRPPPDGEPAAGVGKVFLEYVDIDGATKARAGLNGRKFDGNQVVAVFYPENK 364
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 365 FAQGDYEG 372
>ref|XP_006582437.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Glycine max] gi|571462974|ref|XP_006582438.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X3 [Glycine max]
Length = 409
Score = 114 bits (284), Expect = 2e-23
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
G L ++VIPRP +GE A GVGKVFLEY D+DGA KARAGLNGRKF GNQVVAVFYPENK
Sbjct: 342 GTLVNVVIPRPPPDGEPAAGVGKVFLEYVDIDGATKARAGLNGRKFDGNQVVAVFYPENK 401
Query: 181 FSQGDYDG 204
F+QGDY+G
Sbjct: 402 FAQGDYEG 409
>ref|XP_004232384.1| PREDICTED: splicing factor U2af large subunit A-like [Solanum
lycopersicum]
Length = 558
Score = 114 bits (284), Expect = 2e-23
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = +1
Query: 1 GALASIVIPRPGTNGEQAPGVGKVFLEYSDLDGAAKARAGLNGRKFGGNQVVAVFYPENK 180
GAL ++VIPRP NGE PG+GKVFLEY+D+D ++KAR GLNGRKFGGNQV+AVFYPENK
Sbjct: 491 GALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENK 550
Query: 181 FSQGDYD 201
FS+GDY+
Sbjct: 551 FSEGDYE 557