BLASTX nr result

ID: Cocculus23_contig00012570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00012570
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S16323 hypothetical protein - Arabidopsis thaliana gi|16328...    63   5e-08
ref|NP_001118549.1| uncharacterized protein [Arabidopsis thalian...    63   5e-08
ref|XP_004159093.1| PREDICTED: uncharacterized protein LOC101231...    56   6e-06

>pir||S16323 hypothetical protein - Arabidopsis thaliana
           gi|16328|emb|CAA41623.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 29

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +2

Query: 119 MGFCICPLESPARLLWTTSFFRHKLMIF 202
           MGFCICPLESPARLLW+TSFFRHK+MIF
Sbjct: 2   MGFCICPLESPARLLWSTSFFRHKIMIF 29


>ref|NP_001118549.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332640150|gb|AEE73671.1| uncharacterized protein
           AT3G01472 [Arabidopsis thaliana]
          Length = 28

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +2

Query: 119 MGFCICPLESPARLLWTTSFFRHKLMIF 202
           MGFCICPLESPARLLW+TSFFRHK+MIF
Sbjct: 1   MGFCICPLESPARLLWSTSFFRHKIMIF 28


>ref|XP_004159093.1| PREDICTED: uncharacterized protein LOC101231309 [Cucumis sativus]
          Length = 307

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +2

Query: 119 MGFCICPLESPARLLWTTSFFRHKLMIF 202
           MGFCI PL +PARLLW+TSFFRHKLMIF
Sbjct: 280 MGFCISPLGTPARLLWSTSFFRHKLMIF 307


Top