BLASTX nr result
ID: Cocculus23_contig00012231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00012231
(288 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop... 64 2e-08
ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial ... 63 5e-08
ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial ... 63 5e-08
ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobrom... 63 5e-08
ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Popu... 62 6e-08
gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis] 60 2e-07
ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus ... 60 2e-07
ref|XP_006649801.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 60 4e-07
gb|EEE58753.1| hypothetical protein OsJ_10246 [Oryza sativa Japo... 58 1e-06
gb|EEC74918.1| hypothetical protein OsI_10864 [Oryza sativa Indi... 58 1e-06
ref|NP_001049648.1| Os03g0265400 [Oryza sativa Japonica Group] g... 58 1e-06
gb|AAP06837.1| unknown protein [Oryza sativa Japonica Group] 58 1e-06
ref|XP_007134448.1| hypothetical protein PHAVU_010G048100g [Phas... 58 2e-06
ref|XP_006425034.1| hypothetical protein CICLE_v10028981mg [Citr... 58 2e-06
ref|XP_004984686.1| PREDICTED: 50S ribosomal protein L4, chlorop... 57 2e-06
ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chlorop... 57 3e-06
ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chlorop... 57 3e-06
emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera] 57 3e-06
ref|XP_007205651.1| hypothetical protein PRUPE_ppa009351mg [Prun... 56 6e-06
tpg|DAA44542.1| TPA: 50S ribosomal protein L4 [Zea mays] 56 6e-06
>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
ribosomal protein L4, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/56 (66%), Positives = 42/56 (75%)
Frame = -3
Query: 286 KSLNH*SDLRSEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
K+L+ S+L + P LS + KVGET L LKSAPPETARAV HR IITDQQNKRR
Sbjct: 43 KTLSISSELATLPV--LSFTGQKVGETYLDLKSAPPETARAVVHRAIITDQQNKRR 96
>ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial [Theobroma cacao]
gi|508786524|gb|EOY33780.1| 50S ribosomal protein L4
isoform 3, partial [Theobroma cacao]
Length = 269
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +K+GET L LKSAPPETARAV HR IITDQQNKRR
Sbjct: 37 LSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQQNKRR 76
>ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial [Theobroma cacao]
gi|508786523|gb|EOY33779.1| 50S ribosomal protein L4
isoform 2, partial [Theobroma cacao]
Length = 271
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +K+GET L LKSAPPETARAV HR IITDQQNKRR
Sbjct: 37 LSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQQNKRR 76
>ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobroma cacao]
gi|508786522|gb|EOY33778.1| 50S ribosomal protein L4
isoform 1 [Theobroma cacao]
Length = 303
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +K+GET L LKSAPPETARAV HR IITDQQNKRR
Sbjct: 54 LSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQQNKRR 93
>ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Populus trichocarpa]
gi|550336953|gb|EEE92992.2| hypothetical protein
POPTR_0006s23770g [Populus trichocarpa]
Length = 290
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +K+GET L LKSAPPETARAV HR IITDQQNKRR
Sbjct: 53 LSFTGEKIGETYLDLKSAPPETARAVVHRGIITDQQNKRR 92
>gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis]
Length = 293
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = -3
Query: 286 KSLNH*SDLRSEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
K L+ S+L + P LS + +KVGET L LKSAPPETARAV HR IITD QNKRR
Sbjct: 48 KPLSIISELATLPV--LSFTGEKVGETFLDLKSAPPETARAVVHRGIITDLQNKRR 101
>ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223535036|gb|EEF36718.1| 50S ribosomal protein L4,
putative [Ricinus communis]
Length = 283
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +K+GET L LK+APP+TARAV HR IITDQQNKRR
Sbjct: 57 LSFTGEKIGETYLDLKTAPPDTARAVVHRAIITDQQNKRR 96
>ref|XP_006649801.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L4,
chloroplastic-like [Oryza brachyantha]
Length = 320
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -3
Query: 250 PFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
P LS S +KVGE L LKSAPP TARAV HR +ITD+QNKRR
Sbjct: 63 PLPVLSFSGEKVGEVALDLKSAPPSTARAVVHRGLITDRQNKRR 106
>gb|EEE58753.1| hypothetical protein OsJ_10246 [Oryza sativa Japonica Group]
Length = 323
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +KVGE L LKSAPP TARAV HR IITD+QNKRR
Sbjct: 70 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRR 109
>gb|EEC74918.1| hypothetical protein OsI_10864 [Oryza sativa Indica Group]
Length = 324
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +KVGE L LKSAPP TARAV HR IITD+QNKRR
Sbjct: 71 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRR 110
>ref|NP_001049648.1| Os03g0265400 [Oryza sativa Japonica Group]
gi|108707338|gb|ABF95133.1| 50S ribosomal protein L4,
chloroplast precursor, putative, expressed [Oryza sativa
Japonica Group] gi|113548119|dbj|BAF11562.1|
Os03g0265400 [Oryza sativa Japonica Group]
gi|215678998|dbj|BAG96428.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215692528|dbj|BAG87948.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737540|dbj|BAG96670.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 323
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +KVGE L LKSAPP TARAV HR IITD+QNKRR
Sbjct: 70 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRR 109
>gb|AAP06837.1| unknown protein [Oryza sativa Japonica Group]
Length = 426
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +KVGE L LKSAPP TARAV HR IITD+QNKRR
Sbjct: 70 LSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRR 109
>ref|XP_007134448.1| hypothetical protein PHAVU_010G048100g [Phaseolus vulgaris]
gi|561007493|gb|ESW06442.1| hypothetical protein
PHAVU_010G048100g [Phaseolus vulgaris]
Length = 308
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -3
Query: 259 RSEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
++ P L+ S +KVGE+ L L+SAPP TARAV HR ++TD QNKRR
Sbjct: 56 KASPIPVLNFSGEKVGESLLDLRSAPPSTARAVVHRAVVTDLQNKRR 102
>ref|XP_006425034.1| hypothetical protein CICLE_v10028981mg [Citrus clementina]
gi|568870601|ref|XP_006488488.1| PREDICTED: 50S
ribosomal protein L4, chloroplastic-like [Citrus
sinensis] gi|557526968|gb|ESR38274.1| hypothetical
protein CICLE_v10028981mg [Citrus clementina]
Length = 288
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -3
Query: 256 SEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
+ P LS + +K+GET L LKSA P+TARAV HR +ITD QNKRR
Sbjct: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRR 96
>ref|XP_004984686.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Setaria
italica]
Length = 308
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + DKVGE L LKSAPP TARAV HR IITD+QN RR
Sbjct: 63 LSFTGDKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARR 102
>ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform X1
[Glycine max] gi|571465968|ref|XP_006583523.1|
PREDICTED: 50S ribosomal protein L4, chloroplastic-like
isoform X2 [Glycine max]
Length = 303
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = -3
Query: 256 SEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
S P L+ S ++VGE+ L L+SAPP+TARAV HR ++TD QNKRR
Sbjct: 54 SPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDLQNKRR 99
>ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
[Glycine max]
Length = 310
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = -3
Query: 256 SEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
S P L+ S ++VGE+ L L+SAPP+TARAV HR ++TD QNKRR
Sbjct: 59 SPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDLQNKRR 104
>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
Length = 306
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = -3
Query: 286 KSLNH*SDLRSEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
K L+ SDL + P LS + +KVGET+L LKSAP +TARAV HR IITD QN+RR
Sbjct: 42 KPLSVRSDLVAIPI--LSFTGEKVGETQLNLKSAPLDTARAVVHRGIITDLQNRRR 95
>ref|XP_007205651.1| hypothetical protein PRUPE_ppa009351mg [Prunus persica]
gi|462401293|gb|EMJ06850.1| hypothetical protein
PRUPE_ppa009351mg [Prunus persica]
Length = 296
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/56 (60%), Positives = 39/56 (69%)
Frame = -3
Query: 286 KSLNH*SDLRSEPFQSLSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
K L S+L + P LS + DKVGET L LK+A P+TARAV HR IITD QNKRR
Sbjct: 40 KPLTISSELATLPV--LSFTGDKVGETFLDLKAALPDTARAVVHRAIITDLQNKRR 93
>tpg|DAA44542.1| TPA: 50S ribosomal protein L4 [Zea mays]
Length = 314
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -3
Query: 238 LSLSSDKVGETKLVLKSAPPETARAVDHRRIITDQQNKRR 119
LS + +KVGE L LKSAPP TARAV HR IITD+QN RR
Sbjct: 65 LSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARR 104