BLASTX nr result
ID: Cocculus23_contig00011824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00011824
(350 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD93727.1| RNA polymerase beta chain [Cocculus trilobus] 223 2e-56
gb|AEM44893.1| RNA polymerase beta chain [Menispermum canadense] 202 4e-50
gb|ABD93851.1| RNA polymerase beta chain [Cissampelos pareira] 201 1e-49
ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]... 175 7e-42
ref|YP_004564093.1| RNA polymerase beta' subunit [Nelumbo nucife... 175 7e-42
gb|ABD93723.1| RNA polymerase beta chain [Nelumbo nucifera] 175 7e-42
gb|ABD93725.1| RNA polymerase beta chain [Xanthorhiza simpliciss... 171 1e-40
ref|YP_740640.1| RNA polymerase beta'' subunit [Nandina domestic... 169 4e-40
gb|ADD31155.1| RNA polymerase beta'' subunit protein [Meliosma a... 169 5e-40
gb|AHE41653.1| RNA polymerase beta' subunit (chloroplast) [Hamam... 168 6e-40
gb|ABQ15067.1| RNA polymerase beta' subunit [Hamamelis japonica] 168 6e-40
gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis] 168 6e-40
gb|ABD93726.1| RNA polymerase beta chain [Ranunculus sp. Qiu 95024] 168 8e-40
gb|ABD93850.1| RNA polymerase beta chain [Sanguinaria canadensis] 167 1e-39
gb|ABD93719.1| RNA polymerase beta chain [Meliosma squamulata] 167 1e-39
gb|ABD93728.1| RNA polymerase beta chain [Akebia quinata] 167 2e-39
gb|ABD93771.1| RNA polymerase beta chain [Lardizabala biternata] 167 2e-39
gb|AAZ03982.1| RNA polymerase beta'' chain [Ranunculus macranthus] 166 3e-39
ref|YP_001004176.1| RNA polymerase beta' subunit [Ranunculus mac... 166 3e-39
gb|ABD93722.1| RNA polymerase beta chain [Platanus occidentalis] 165 5e-39
>gb|ABD93727.1| RNA polymerase beta chain [Cocculus trilobus]
Length = 865
Score = 223 bits (569), Expect = 2e-56
Identities = 113/116 (97%), Positives = 113/116 (97%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN
Sbjct: 383 IQLVRTCLVLNWDQDKKGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 442
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS
Sbjct: 443 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 498
>gb|AEM44893.1| RNA polymerase beta chain [Menispermum canadense]
Length = 294
Score = 202 bits (514), Expect = 4e-50
Identities = 105/116 (90%), Positives = 109/116 (93%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK+GSSI EGVHASFVEVRVKGLI+DFI+MDLVK PISYTGKRNN
Sbjct: 3 IQLVRTCLVLNWDQDKNGSSI--EGVHASFVEVRVKGLIQDFIRMDLVKSPISYTGKRNN 60
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
PVGSGLI VNRS+RTNLNPFFSKARIQQSLTQHQVTIRML NRNKECQSLIILSSS
Sbjct: 61 PVGSGLIPVNRSNRTNLNPFFSKARIQQSLTQHQVTIRMLRNRNKECQSLIILSSS 116
>gb|ABD93851.1| RNA polymerase beta chain [Cissampelos pareira]
Length = 774
Score = 201 bits (510), Expect = 1e-49
Identities = 104/116 (89%), Positives = 107/116 (92%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQD+ GSSI EGV ASFVEV+VKGLIRDFIKMD VKPPISYTGKRN+
Sbjct: 297 IQLVRTCLVLNWDQDEKGSSI--EGVRASFVEVKVKGLIRDFIKMDSVKPPISYTGKRND 354
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
PVGSGLISVNR DRTNLNPFFSK RIQQSLTQHQVTIRMLGNRNKECQSLIILSSS
Sbjct: 355 PVGSGLISVNRPDRTNLNPFFSKERIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 410
>ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]
gi|224474124|gb|ACN49313.1| RNA polymerase beta' subunit
[Nelumbo lutea] gi|383286882|gb|AFH01531.1| RNA
polymerase beta'' subunit (chloroplast) [Nelumbo lutea]
Length = 1390
Score = 175 bits (443), Expect = 7e-42
Identities = 93/116 (80%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSI E VHAS VEVR LIRDFI+MDL K PISY GKRN+
Sbjct: 834 IQLVRTCLVLNWDQDKKGSSI--EEVHASLVEVRANDLIRDFIRMDLAKSPISYIGKRND 891
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLIS NRSDRTN NPF+SKARIQQSL+QHQ TIR L NRNKECQSLIILSSS
Sbjct: 892 PAGSGLISDNRSDRTNRNPFYSKARIQQSLSQHQGTIRTLLNRNKECQSLIILSSS 947
>ref|YP_004564093.1| RNA polymerase beta' subunit [Nelumbo nucifera]
gi|224474212|gb|ACN49398.1| RNA polymerase beta' subunit
[Nelumbo nucifera] gi|290489544|gb|ADD31156.1| RNA
polymerase beta'' subunit protein [Nelumbo nucifera]
gi|383286787|gb|AFH01437.1| RNA polymerase beta'' subunit
(chloroplast) [Nelumbo nucifera]
gi|519666902|gb|AGO98514.1| RNA polymerase beta' subunit
(chloroplast) [Nelumbo nucifera]
Length = 1390
Score = 175 bits (443), Expect = 7e-42
Identities = 93/116 (80%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSI E VHAS VEVR LIRDFI+MDL K PISY GKRN+
Sbjct: 834 IQLVRTCLVLNWDQDKKGSSI--EEVHASLVEVRANDLIRDFIRMDLAKSPISYIGKRND 891
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLIS NRSDRTN NPF+SKARIQQSL+QHQ TIR L NRNKECQSLIILSSS
Sbjct: 892 PAGSGLISDNRSDRTNRNPFYSKARIQQSLSQHQGTIRTLLNRNKECQSLIILSSS 947
>gb|ABD93723.1| RNA polymerase beta chain [Nelumbo nucifera]
Length = 866
Score = 175 bits (443), Expect = 7e-42
Identities = 93/116 (80%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSI E VHAS VEVR LIRDFI+MDL K PISY GKRN+
Sbjct: 385 IQLVRTCLVLNWDQDKKGSSI--EEVHASLVEVRANDLIRDFIRMDLAKSPISYIGKRND 442
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLIS NRSDRTN NPF+SKARIQQSL+QHQ TIR L NRNKECQSLIILSSS
Sbjct: 443 PAGSGLISDNRSDRTNRNPFYSKARIQQSLSQHQGTIRTLLNRNKECQSLIILSSS 498
>gb|ABD93725.1| RNA polymerase beta chain [Xanthorhiza simplicissima]
Length = 861
Score = 171 bits (432), Expect = 1e-40
Identities = 91/116 (78%), Positives = 98/116 (84%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK+GSSI E VHASFVEVRV LIR FI+MDLVKPPI YT KRN+
Sbjct: 383 IQLVRTCLVLNWDQDKNGSSI--EEVHASFVEVRVNNLIRYFIRMDLVKPPILYTRKRND 440
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLI N SDRTNLNPF+SKARI+QSLT++Q TIR L NRNKECQSLI LSSS
Sbjct: 441 PAGSGLIPANGSDRTNLNPFYSKARIKQSLTRYQGTIRTLLNRNKECQSLITLSSS 496
>ref|YP_740640.1| RNA polymerase beta'' subunit [Nandina domestica]
gi|122165971|sp|Q09FX1.1|RPOC2_NANDO RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|114054460|gb|ABI49853.1| RNA polymerase beta'' subunit
[Nandina domestica]
Length = 1377
Score = 169 bits (428), Expect = 4e-40
Identities = 91/116 (78%), Positives = 96/116 (82%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQ+K+GSS+ E VHASFVEVRV LIRDFI+MDLVK PISYT KRN
Sbjct: 824 IQLVRTCLVLNWDQEKNGSSM--EEVHASFVEVRVNNLIRDFIRMDLVKSPISYTRKRNA 881
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GS LI N SD TNLNPF+SKARIQQSLTQHQ TIR L NRNKECQSLI LSSS
Sbjct: 882 PAGSELILANGSDYTNLNPFYSKARIQQSLTQHQGTIRTLLNRNKECQSLIFLSSS 937
>gb|ADD31155.1| RNA polymerase beta'' subunit protein [Meliosma aff. cuneifolia Moore
333]
Length = 1377
Score = 169 bits (427), Expect = 5e-40
Identities = 91/116 (78%), Positives = 96/116 (82%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK SSI E VHAS VEVR LIRDFI+MDLVKPPISYT KRN+
Sbjct: 832 IQLVRTCLVLNWDQDKKDSSI--EEVHASCVEVRAIDLIRDFIRMDLVKPPISYTVKRND 889
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLI N SDRTN+NPF+SKARIQQSL+QHQ TIR L NRNKEC SLIILSSS
Sbjct: 890 PAGSGLIPDNGSDRTNINPFYSKARIQQSLSQHQGTIRTLLNRNKECHSLIILSSS 945
>gb|AHE41653.1| RNA polymerase beta' subunit (chloroplast) [Hamamelis mollis]
Length = 1387
Score = 168 bits (426), Expect = 6e-40
Identities = 89/116 (76%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK SSI HASFVEVR GLIRDF+++DLVK PISYTGKRN+
Sbjct: 834 IQLVRTCLVLNWDQDKKSSSIG--EAHASFVEVRTNGLIRDFLRIDLVKSPISYTGKRND 891
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLIS N SDRTN+NPF+SKARIQQSL+Q+Q IR L NRNKECQSLIILSSS
Sbjct: 892 PSGSGLISDNGSDRTNINPFYSKARIQQSLSQNQGIIRALLNRNKECQSLIILSSS 947
>gb|ABQ15067.1| RNA polymerase beta' subunit [Hamamelis japonica]
Length = 860
Score = 168 bits (426), Expect = 6e-40
Identities = 89/116 (76%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK SSI HASFVEVR GLIRDF+++DLVK PISYTGKRN+
Sbjct: 382 IQLVRTCLVLNWDQDKKSSSIG--EAHASFVEVRTNGLIRDFLRIDLVKSPISYTGKRND 439
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLIS N SDRTN+NPF+SKARIQQSL+Q+Q IR L NRNKECQSLIILSSS
Sbjct: 440 PSGSGLISDNGSDRTNINPFYSKARIQQSLSQNQGIIRALLNRNKECQSLIILSSS 495
>gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis]
Length = 863
Score = 168 bits (426), Expect = 6e-40
Identities = 89/116 (76%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK SSI HASFVEVR GLIRDF+++DLVK PISYTGKRN+
Sbjct: 385 IQLVRTCLVLNWDQDKKSSSIG--EAHASFVEVRTNGLIRDFLRIDLVKSPISYTGKRND 442
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLIS N SDRTN+NPF+SKARIQQSL+Q+Q IR L NRNKECQSLIILSSS
Sbjct: 443 PSGSGLISDNGSDRTNINPFYSKARIQQSLSQNQGIIRALLNRNKECQSLIILSSS 498
>gb|ABD93726.1| RNA polymerase beta chain [Ranunculus sp. Qiu 95024]
Length = 862
Score = 168 bits (425), Expect = 8e-40
Identities = 89/116 (76%), Positives = 95/116 (81%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSI E V ASFVEVR+ LIRDFIKMDLVK PISYT KRN+
Sbjct: 383 IQLVRTCLVLNWDQDKKGSSI--EEVRASFVEVRINALIRDFIKMDLVKSPISYTRKRND 440
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
PVGSGLI NRSD TNLNPF+SK RI+QS +HQ TIR L N+NKECQSLI LSSS
Sbjct: 441 PVGSGLIPANRSDHTNLNPFYSKTRIKQSRIRHQGTIRTLLNKNKECQSLITLSSS 496
>gb|ABD93850.1| RNA polymerase beta chain [Sanguinaria canadensis]
Length = 853
Score = 167 bits (424), Expect = 1e-39
Identities = 93/118 (78%), Positives = 97/118 (82%), Gaps = 2/118 (1%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSI E V ASFVEVRV LIRDFI+MDLVK PISYTGKRN+
Sbjct: 379 IQLVRTCLVLNWDQDKKGSSI--EEVDASFVEVRVNNLIRDFIRMDLVKSPISYTGKRND 436
Query: 169 PVGSGL--ISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGL I N SDRTNLNPF+SKAR+QQS TQHQ TIR L NRNKE QSLIILSSS
Sbjct: 437 PGGSGLRLIPANGSDRTNLNPFYSKARLQQSFTQHQGTIRTLLNRNKESQSLIILSSS 494
>gb|ABD93719.1| RNA polymerase beta chain [Meliosma squamulata]
Length = 861
Score = 167 bits (423), Expect = 1e-39
Identities = 90/116 (77%), Positives = 95/116 (81%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK SSI E VHAS VEVR LIRDFI+MDLVKPPISYT KRN+
Sbjct: 383 IQLVRTCLVLNWDQDKKDSSI--EEVHASCVEVRAIDLIRDFIRMDLVKPPISYTVKRND 440
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLI N SDRTN+NPF+SK RIQQSL+QHQ TIR L NRNKEC SLIILSSS
Sbjct: 441 PAGSGLIPDNGSDRTNINPFYSKGRIQQSLSQHQGTIRTLLNRNKECHSLIILSSS 496
>gb|ABD93728.1| RNA polymerase beta chain [Akebia quinata]
Length = 861
Score = 167 bits (422), Expect = 2e-39
Identities = 89/116 (76%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQ+K+GSS E VHASFV+VR+ LIRDFI+MDLVK ISYTGKRN+
Sbjct: 383 IQLVRTCLVLNWDQEKNGSSR--EEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRND 440
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
GSGLI N SDRTNLNPF+SK RIQQSLTQH+ TIR L NRNKECQSLIILSSS
Sbjct: 441 SAGSGLIPANGSDRTNLNPFYSKTRIQQSLTQHKGTIRTLLNRNKECQSLIILSSS 496
>gb|ABD93771.1| RNA polymerase beta chain [Lardizabala biternata]
Length = 861
Score = 167 bits (422), Expect = 2e-39
Identities = 90/116 (77%), Positives = 97/116 (83%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK+GSS E VHASFV+VR+ LIRDFI+MDLVK ISYTGKRN+
Sbjct: 383 IQLVRTCLVLNWDQDKNGSSR--EEVHASFVQVRLNDLIRDFIRMDLVKSLISYTGKRND 440
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
SGLI N SDRTNLNPF+SKARIQQSLTQH+ TIR L NRNKECQSLIILSSS
Sbjct: 441 SAWSGLIPANGSDRTNLNPFYSKARIQQSLTQHKGTIRTLLNRNKECQSLIILSSS 496
>gb|AAZ03982.1| RNA polymerase beta'' chain [Ranunculus macranthus]
Length = 1376
Score = 166 bits (420), Expect = 3e-39
Identities = 88/116 (75%), Positives = 96/116 (82%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSI E V ASFVE+++ LIRDFIKMDLVK PISYT KRN+
Sbjct: 831 IQLVRTCLVLNWDQDKKGSSI--EEVRASFVEIKINALIRDFIKMDLVKYPISYTRKRND 888
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
PVGSGLI VN SD TNLNPF+SKA I+QSL +HQ TIR L N+NKECQSLI LSSS
Sbjct: 889 PVGSGLIPVNGSDHTNLNPFYSKASIKQSLIRHQGTIRTLLNKNKECQSLITLSSS 944
>ref|YP_001004176.1| RNA polymerase beta' subunit [Ranunculus macranthus]
gi|212288348|sp|A1XGM8.1|RPOC2_RANMC RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|85540794|gb|ABC70746.1| RNA polymerase beta' subunit
[Ranunculus macranthus]
Length = 1383
Score = 166 bits (420), Expect = 3e-39
Identities = 88/116 (75%), Positives = 96/116 (82%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQDK GSSI E V ASFVE+++ LIRDFIKMDLVK PISYT KRN+
Sbjct: 828 IQLVRTCLVLNWDQDKKGSSI--EEVRASFVEIKINALIRDFIKMDLVKYPISYTRKRND 885
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
PVGSGLI VN SD TNLNPF+SKA I+QSL +HQ TIR L N+NKECQSLI LSSS
Sbjct: 886 PVGSGLIPVNGSDHTNLNPFYSKASIKQSLIRHQGTIRTLLNKNKECQSLITLSSS 941
>gb|ABD93722.1| RNA polymerase beta chain [Platanus occidentalis]
Length = 863
Score = 165 bits (418), Expect = 5e-39
Identities = 87/116 (75%), Positives = 98/116 (84%)
Frame = -2
Query: 349 IQLV*ACLVLNWDQDKSGSSIDIEGVHASFVEVRVKGLIRDFIKMDLVKPPISYTGKRNN 170
IQLV CLVLNWDQ K+GSSI + VHASFVEVR LI+DFI+MDLVK IS+TGKRN+
Sbjct: 384 IQLVRTCLVLNWDQGKNGSSI--KEVHASFVEVRANDLIQDFIRMDLVKSTISHTGKRND 441
Query: 169 PVGSGLISVNRSDRTNLNPFFSKARIQQSLTQHQVTIRMLGNRNKECQSLIILSSS 2
P GSGLI N SDRTN+NPF+SKARIQQSL++HQ T+R L NRNKECQSLIILSSS
Sbjct: 442 PAGSGLIPDNGSDRTNINPFYSKARIQQSLSRHQGTLRSLLNRNKECQSLIILSSS 497