BLASTX nr result
ID: Cocculus23_contig00011454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00011454
(1722 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth... 534 e-149
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera] 534 e-149
emb|CBI15850.3| unnamed protein product [Vitis vinifera] 533 e-149
gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Mimulus... 509 e-141
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth... 508 e-141
ref|XP_007017040.1| Pseudouridine synthase family protein [Theob... 505 e-140
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth... 505 e-140
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth... 501 e-139
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth... 498 e-138
ref|XP_007207376.1| hypothetical protein PRUPE_ppa004352mg [Prun... 497 e-138
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth... 493 e-136
ref|XP_007142071.1| hypothetical protein PHAVU_008G250100g [Phas... 492 e-136
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul... 490 e-136
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth... 489 e-135
ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synth... 487 e-135
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu... 486 e-134
ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synth... 484 e-134
ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synth... 480 e-133
ref|XP_007142072.1| hypothetical protein PHAVU_008G250200g [Phas... 473 e-130
ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synth... 471 e-130
>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
Length = 564
Score = 534 bits (1375), Expect = e-149
Identities = 285/441 (64%), Positives = 337/441 (76%), Gaps = 7/441 (1%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+SLSTIE ELETA+FKAGGIRDSNYG+LHKIGW RSSRTDKGVHSLATMISLKMEIP N
Sbjct: 85 ESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPAN 144
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWK+DP GI LAN++N +LPNN+KVFSILPSQRSFDAR+EC +RRYSYLLPAEIIGI++
Sbjct: 145 AWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSN 204
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQ-----RRMXXXXXX 1196
SS+ EID +++EFNDIL +FEGEHPF NYTIRSKYRKQ P K+ RR
Sbjct: 205 SSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSGEA 264
Query: 1195 XXXXXXXXXELVKNRVNIVSVLDL-SGENVNHLSLLSASDERLVDTEKKHQDNFENESIP 1019
+ +N V D GEN N S ++ E V + ++ + +S
Sbjct: 265 STSEFEVSDGEENSGINGVISSDYDEGENQNS-SESTSFVEHPVGSSNNNEKGLKEQS-- 321
Query: 1018 PDEGARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFM 839
L V ARWLH PDERDRI+ASHFRKI+ CSCGKLE+ LG+ YVE+SI GESFM
Sbjct: 322 ------PKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFM 375
Query: 838 LHQIRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-I 662
LHQIRKMVGTA+AVKR+LLP D++ LSLTKFSRIVLPLAPSEVLILRGN FS+R+ PG +
Sbjct: 376 LHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNV 435
Query: 661 ARPEVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELE 482
RPE+ L+ESEEILKSV+EFY SV+LPQVSKFL+PSKSPW+DW+ L +SIP+ EL+
Sbjct: 436 KRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELD 494
Query: 481 EVRRAQKLWKESFRIKTNVPS 419
+VR A KLWKE+FR +T V S
Sbjct: 495 DVRTAWKLWKENFRSRTKVMS 515
>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
Length = 602
Score = 534 bits (1375), Expect = e-149
Identities = 285/437 (65%), Positives = 336/437 (76%), Gaps = 7/437 (1%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+SLSTIE ELETA+FKAGGIRDSNYG+LHKIGW RSSRTDKGVHSLATMISLKMEIP N
Sbjct: 85 ESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPAN 144
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWK+DP GI LAN++N +LPNN+KVFSILPSQRSFDAR+EC +RRYSYLLPAEIIGI++
Sbjct: 145 AWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSN 204
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQ-----RRMXXXXXX 1196
SS+ EID +++EFNDIL +FEGEHPF NYTIRSKYRKQ P K+ RR
Sbjct: 205 SSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSGEA 264
Query: 1195 XXXXXXXXXELVKNRVNIVSVLDL-SGENVNHLSLLSASDERLVDTEKKHQDNFENESIP 1019
+ VN V D GEN N S ++ E V + ++ + +S
Sbjct: 265 STSEFEVSDGEENSGVNGVISSDYDEGENQNS-SESTSFVEHPVGSSNNNEKGLKEQS-- 321
Query: 1018 PDEGARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFM 839
S L V ARWLH PDERDRI+ASHFRKI+ CSCGKLE+ LG+ YVE+SI GESFM
Sbjct: 322 ------SKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFM 375
Query: 838 LHQIRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-I 662
LHQIRKMVGTA+AVKR+LLP D++ LSLTKFSRIVLPLAPSEVLILRGN FS+R+ PG +
Sbjct: 376 LHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNV 435
Query: 661 ARPEVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELE 482
RPE+ L+ESEEILKSV+EFY SV+LPQVSKFL+PSKSPW+DW+ L +SIP+ EL+
Sbjct: 436 KRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELD 494
Query: 481 EVRRAQKLWKESFRIKT 431
+VR A KLWKE+FR +T
Sbjct: 495 DVRTAWKLWKENFRSRT 511
>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 533 bits (1374), Expect = e-149
Identities = 281/435 (64%), Positives = 336/435 (77%), Gaps = 1/435 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+SLSTIE ELETA+FKAGGIRDSNYG+LHKIGW RSSRTDKGVHSLATMISLKMEIP N
Sbjct: 85 ESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPAN 144
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWK+DP GI LAN++N +LPNN+KVFSILPSQRSFDAR+EC +RRYSYLLPAEIIGI++
Sbjct: 145 AWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSN 204
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
SS+ EID +++EFNDIL +FEGEHPF NYTIRSKYRKQ P K+
Sbjct: 205 SSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRKQFPAKQSPGN------------- 251
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR 1001
+ + +++S GEN N S ++ E V + ++ + +S
Sbjct: 252 --GGVFRRAKSSVISSDYDEGENQNS-SESTSFVEHPVGSSNNNEKGLKEQS-------- 300
Query: 1000 SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRK 821
L V ARWLH PDERDRI+ASHFRKI+ CSCGKLE+ LG+ YVE+SI GESFMLHQIRK
Sbjct: 301 PKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRK 360
Query: 820 MVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVK 644
MVGTA+AVKR+LLP D++ LSLTKFSRIVLPLAPSEVLILRGN FS+R+ PG + RPE+
Sbjct: 361 MVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEML 420
Query: 643 MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 464
L+ESEEILKSV+EFY SV+LPQVSKFL+PSKSPW+DW+ L +SIP+ EL++VR A
Sbjct: 421 TLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDDVRTAW 479
Query: 463 KLWKESFRIKTNVPS 419
KLWKE+FR +T V S
Sbjct: 480 KLWKENFRSRTKVMS 494
>gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Mimulus guttatus]
Length = 506
Score = 509 bits (1310), Expect = e-141
Identities = 260/426 (61%), Positives = 321/426 (75%), Gaps = 4/426 (0%)
Frame = -3
Query: 1708 STIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKD 1529
STIE ELE AI+KAGGIRDSN+GDL+KIGWARSSRTDKGVHSLATMI+LK+EIP++AW +
Sbjct: 91 STIEGELENAIYKAGGIRDSNFGDLNKIGWARSSRTDKGVHSLATMITLKLEIPESAWNN 150
Query: 1528 DPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSV 1349
DP G LA ++N+YLP N++VFSILPSQRSFDAR+EC +R+YSYLLPAEIIG++ S++
Sbjct: 151 DPNGFALATYVNSYLPRNIRVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENSTAS 210
Query: 1348 EIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXX 1169
E+D +LS+FNDIL +F+GEHPFHNYT+RSKYRKQ P+K S +M
Sbjct: 211 EVDHHLSDFNDILNTFQGEHPFHNYTVRSKYRKQFPKKGSSASKMGKSLD---------- 260
Query: 1168 ELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNF---ENESIPPDEGARS 998
V V + S + ++ + E+ D+ + E P + S
Sbjct: 261 ------VQSEFVSEGSDDEEEEEDTNVVTESLATEAEETKYDSLLPKDEEDQPKKQNLVS 314
Query: 997 PLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKM 818
P V ARWLHEPDE+DRI+ASHFRKI+ CSCGKLE+ GM++VEISI GESFMLHQIRKM
Sbjct: 315 P--VLARWLHEPDEKDRISASHFRKIFQCSCGKLEQLSGMNFVEISICGESFMLHQIRKM 372
Query: 817 VGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKM 641
VGTA+AVKR LLP D+++LSL+KFSRIV+PLAPSEVLILRGN F +R PG I RPE+
Sbjct: 373 VGTAIAVKRDLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRNRPGNIKRPEMLT 432
Query: 640 LVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQK 461
LVES+EILK V++FY SVMLPQ+S FL+P KSPWN+W+ LDANT IP+ +LEEVR A K
Sbjct: 433 LVESKEILKLVDDFYYSVMLPQLSVFLDPVKSPWNEWVDLLDANTCIPESQLEEVRSAWK 492
Query: 460 LWKESF 443
LW+E F
Sbjct: 493 LWREEF 498
>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Solanum tuberosum]
Length = 487
Score = 508 bits (1309), Expect = e-141
Identities = 256/431 (59%), Positives = 326/431 (75%), Gaps = 1/431 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+ LSTIE ELE AIFKAGGIRDSN+G+L+KIGWARSSRTDKGVHSLATMISLKMEIP +
Sbjct: 72 EHQLSTIEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPAD 131
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AW+DDP GI LAN +N+ LP N++VFSILPS++ FDAR+EC R+YSYL+PAEIIGI+N
Sbjct: 132 AWEDDPNGIALANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKND 191
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S+S EI+ +++ FNDIL SFEGEHPFHNYTIRSKYRKQ+P + +
Sbjct: 192 STSSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNESL---------- 241
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR 1001
L K R + + S E+ + +V+ E ++ + NE + +
Sbjct: 242 -----LKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEKVSHSKDLN 296
Query: 1000 SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRK 821
S + + ARWLHEPD RD+++++HFR+I+ C CGKLE+ LGM+YVE+SI GESFMLHQIRK
Sbjct: 297 SVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRK 356
Query: 820 MVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVK 644
MVGTAVA+KR LLP D++ +SL KFSRIVLPLAPSEVL+L+GN F+LR PG I RPE+
Sbjct: 357 MVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEML 416
Query: 643 MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 464
L+ES++ILK+V++FY S MLPQ+S+FL+PSKSPW++W+ LDANTSIPD +LEEVR A
Sbjct: 417 TLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAW 476
Query: 463 KLWKESFRIKT 431
KLWK + +T
Sbjct: 477 KLWKAQYDSRT 487
>ref|XP_007017040.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508787403|gb|EOY34659.1| Pseudouridine synthase family
protein [Theobroma cacao]
Length = 507
Score = 505 bits (1300), Expect = e-140
Identities = 264/428 (61%), Positives = 319/428 (74%), Gaps = 4/428 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+ LSTIE ELETAIFKAGGIRDSNYGDLHKI WARSSRTDKGVHSLATMI+LKMEIP++
Sbjct: 79 EHQLSTIENELETAIFKAGGIRDSNYGDLHKIAWARSSRTDKGVHSLATMITLKMEIPED 138
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWK+DP GI LA +N+YLP+++KVFSILPSQ+SFD R+EC +R+YSYLLPAEIIGI++
Sbjct: 139 AWKEDPNGIALAKCVNSYLPDSIKVFSILPSQKSFDPRRECNLRKYSYLLPAEIIGIKSH 198
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S EI+ ++S+FN IL FEGEHPFHNYT R+KYR+Q P ++ ++
Sbjct: 199 FSEAEINHHISDFNSILNCFEGEHPFHNYTQRAKYRRQIPPRQTARNGRVPKGAEAHDES 258
Query: 1180 XXXXEL---VKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDE 1010
V+ I L+ E + ++ DE VD ++ + +S
Sbjct: 259 STSELEESDVEEDPRIEETTTLNSEEKS-----TSFDEPRVDCCDGQGNSLQYQS----- 308
Query: 1009 GARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQ 830
S + V ARWL+EPDE DRITASHFRKI+ CSCG+LE S+G Y+EISI GESFMLHQ
Sbjct: 309 ---SNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDYIEISIWGESFMLHQ 365
Query: 829 IRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSP-GIARP 653
IRKMVGTAVAVKR L P D++ LSL KFSRIVLPLAPSEVLILRGN F LR+ P I RP
Sbjct: 366 IRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPLAPSEVLILRGNTFILRKMPSNITRP 425
Query: 652 EVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVR 473
E+ +VESEEILK V++FY+SV+LPQVSKFL+PSKSPW +W+ LDANTS+PD EL+EVR
Sbjct: 426 EMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDANTSVPDAELDEVR 485
Query: 472 RAQKLWKE 449
A KLWKE
Sbjct: 486 TAWKLWKE 493
>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
lycopersicum]
Length = 496
Score = 505 bits (1300), Expect = e-140
Identities = 256/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+ LSTIE ELE AIFKAGGIR+SN+G+L+KIGWARSSRTDKGVHSLATMISLKMEIP +
Sbjct: 68 EHQLSTIEGELEKAIFKAGGIRESNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPAD 127
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AW+DDP GI LAN +N+ LP N++VFSILPS++ FDAR+EC R+YSYL+PAEIIGI+N
Sbjct: 128 AWEDDPNGITLANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKND 187
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S+S EI+ +++ FNDIL SFEGEHPFHNYTIRSKYRKQ+P +
Sbjct: 188 SASSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARN----------------- 230
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDER-------LVDTEKKHQDNFENESI 1022
L+KN + S E ++ + R +V+ E ++ + N +
Sbjct: 231 -----LLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNAEGNCNLKV 285
Query: 1021 PPDEGARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESF 842
+ S + + ARWLHEPD RD+++++HFR+I+ C CGKLE+ LGM+YVE+SI GESF
Sbjct: 286 SHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESF 345
Query: 841 MLHQIRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG- 665
MLHQIRKMVGTAVA+KR LLP D + +SL KFSRIVLPLAPSEVL+L+GN F+LR PG
Sbjct: 346 MLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGN 405
Query: 664 IARPEVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVEL 485
I RPE+ L+ES++ILK+V++FY S +LPQ+S+FL+PSKSPW++W+ LDANTSIPD +L
Sbjct: 406 IIRPEMLTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQL 465
Query: 484 EEVRRAQKLWKESFRIKTNVPS 419
EEVR A KLWK + +T PS
Sbjct: 466 EEVRVAWKLWKAQYDSRTKFPS 487
>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
[Solanum tuberosum]
Length = 423
Score = 501 bits (1290), Expect = e-139
Identities = 252/425 (59%), Positives = 321/425 (75%), Gaps = 1/425 (0%)
Frame = -3
Query: 1702 IEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDP 1523
IE ELE AIFKAGGIRDSN+G+L+KIGWARSSRTDKGVHSLATMISLKMEIP +AW+DDP
Sbjct: 14 IEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDP 73
Query: 1522 CGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEI 1343
GI LAN +N+ LP N++VFSILPS++ FDAR+EC R+YSYL+PAEIIGI+N S+S EI
Sbjct: 74 NGIALANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEI 133
Query: 1342 DSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXEL 1163
+ +++ FNDIL SFEGEHPFHNYTIRSKYRKQ+P + + L
Sbjct: 134 EYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNESL---------------L 178
Query: 1162 VKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVH 983
K R + + S E+ + +V+ E ++ + NE + + S + +
Sbjct: 179 KKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEKVSHSKDLNSVIPIQ 238
Query: 982 ARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAV 803
ARWLHEPD RD+++++HFR+I+ C CGKLE+ LGM+YVE+SI GESFMLHQIRKMVGTAV
Sbjct: 239 ARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAV 298
Query: 802 AVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESE 626
A+KR LLP D++ +SL KFSRIVLPLAPSEVL+L+GN F+LR PG I RPE+ L+ES+
Sbjct: 299 AIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEMLTLLESD 358
Query: 625 EILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKES 446
+ILK+V++FY S MLPQ+S+FL+PSKSPW++W+ LDANTSIPD +LEEVR A KLWK
Sbjct: 359 DILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAWKLWKAQ 418
Query: 445 FRIKT 431
+ +T
Sbjct: 419 YDSRT 423
>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Glycine max] gi|571441413|ref|XP_006575436.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X2
[Glycine max] gi|571441415|ref|XP_006575437.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X3
[Glycine max] gi|571441417|ref|XP_006575438.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X4
[Glycine max]
Length = 493
Score = 498 bits (1283), Expect = e-138
Identities = 260/440 (59%), Positives = 326/440 (74%), Gaps = 9/440 (2%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+SLSTIE ELETAIFKAGGIR+SN+GDL KIGWARSSRTDKGVHSLAT+IS KMEIP+N
Sbjct: 67 EHSLSTIEKELETAIFKAGGIRESNFGDLQKIGWARSSRTDKGVHSLATIISFKMEIPEN 126
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AW DP G GLAN++N+YLP ++KV SILPSQRSFD RKEC++R+YSYLLPAEIIGI++
Sbjct: 127 AWNGDPYGFGLANYVNSYLPFDIKVISILPSQRSFDPRKECILRKYSYLLPAEIIGIQSH 186
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S E+D ++SEFNDIL FEG HPFHNYT RSKYRKQ P ++ S +
Sbjct: 187 FSD-EVDYHISEFNDILNVFEGIHPFHNYTARSKYRKQFPNRQSSSKS------------ 233
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR 1001
+ ++ S + S N + + ++ + ++K + + E +
Sbjct: 234 ---GTSARESLSYESECEYSDGEENSETDEAYTENIVCQSQKFSETHHFAEPVVGSSNKN 290
Query: 1000 --------SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGES 845
S L ARWL+EPDE DR++ASHFRK++ CSCGKLE SLG +Y+EISI GES
Sbjct: 291 GNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGES 350
Query: 844 FMLHQIRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG 665
FMLHQIRKMVGTAVAVKRK LP D+I+LSLT+FSRI+LPLAPSE LILRGN+FS+R PG
Sbjct: 351 FMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFSIRTRPG 410
Query: 664 -IARPEVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVE 488
I RPE++ +V+SEEI K+V++FY SVMLPQVSK L+PS+SPW++WI LDA+TSIP+ +
Sbjct: 411 NITRPEMQTIVKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQ 470
Query: 487 LEEVRRAQKLWKESFRIKTN 428
L+EVR+A L+KE F T+
Sbjct: 471 LDEVRKAWNLFKEKFETTTS 490
>ref|XP_007207376.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
gi|462403018|gb|EMJ08575.1| hypothetical protein
PRUPE_ppa004352mg [Prunus persica]
Length = 515
Score = 497 bits (1279), Expect = e-138
Identities = 262/430 (60%), Positives = 314/430 (73%), Gaps = 4/430 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+SLSTIE ELETAIF AGGIRDSN G+L+KI WARSSRTDKGVHSLATMIS KMEIP+
Sbjct: 84 EHSLSTIEKELETAIFNAGGIRDSNLGNLNKIAWARSSRTDKGVHSLATMISFKMEIPEK 143
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AW DP GI L N IN YLP+N+KVFSILP+QRSFD RKEC +R YSYLLPA++IGI++
Sbjct: 144 AWDGDPYGIALVNHINYYLPHNIKVFSILPAQRSFDPRKECNLRMYSYLLPADVIGIKSH 203
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQR---RMXXXXXXXX 1190
SS EID ++S+FN IL FEGEHPFHNYTIRSKYR++ P KK + +
Sbjct: 204 FSSAEIDYHISDFNSILNCFEGEHPFHNYTIRSKYRRKLPVKKSRRHGSVSITGRSTGEA 263
Query: 1189 XXXXXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDE 1010
V + + + E +N S S++ E + + Q + N D+
Sbjct: 264 SASESEESDVDENFDGTNTPESDAEVLNQNSSPSSNSEGNLRNACEKQGDGGN-----DQ 318
Query: 1009 GARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQ 830
A S + ARWL+EPDERDRI+ASHFRKI+ CSCGKLE+SLG YVE+SI GESFMLHQ
Sbjct: 319 SAGS--VIRARWLYEPDERDRISASHFRKIFLCSCGKLEKSLGHDYVELSISGESFMLHQ 376
Query: 829 IRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARP 653
IRKMVGTAVA+KRKLLP D++ LSL FSRI+LPLAPSEVL LRGN+FS+R PG + RP
Sbjct: 377 IRKMVGTAVAIKRKLLPRDILTLSLAMFSRIILPLAPSEVLFLRGNRFSIRGRPGNVTRP 436
Query: 652 EVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVR 473
E+ +VES EI+K+V+EFY SVMLP+VSKFL PS PW +W+ LD NT IPD EL+EVR
Sbjct: 437 EMMAMVESGEIIKAVDEFYTSVMLPEVSKFLEPSGYPWKEWVENLDRNTGIPDAELDEVR 496
Query: 472 RAQKLWKESF 443
A K+WKE F
Sbjct: 497 NAWKVWKEKF 506
>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria vesca
subsp. vesca]
Length = 509
Score = 493 bits (1269), Expect = e-136
Identities = 260/427 (60%), Positives = 317/427 (74%), Gaps = 3/427 (0%)
Frame = -3
Query: 1714 SLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAW 1535
S+STIE ELETAIFKAGGIR+SN+G+L+KI WARSSRTDKGVHSLATMISLKMEIP+NAW
Sbjct: 84 SISTIEKELETAIFKAGGIRESNFGNLNKISWARSSRTDKGVHSLATMISLKMEIPENAW 143
Query: 1534 KDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSS 1355
DP GI L N IN+YLP ++KVFS +P+QRSFD RKEC +R YSYLLPA++IGI++ S
Sbjct: 144 DGDPYGIALVNHINSYLPRDIKVFSAVPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFS 203
Query: 1354 SVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDS-QRRMXXXXXXXXXXXX 1178
+ EI+ ++++FNDIL +FEGEHPFHNYTIRSKYR + P KK R M
Sbjct: 204 AAEIEDHIADFNDILNAFEGEHPFHNYTIRSKYRMKLPGKKSPIYRNMSKTERSTVEASS 263
Query: 1177 XXXELVKNRVNIVSVLDLSGENVNHLSLLSAS-DERLVDTEKKHQDNFENESIPPDEGAR 1001
E + E +N S +S++ +E L+ KK +D + +S
Sbjct: 264 SELEGSDDEDKFKGRNSSETEVLNQNSSMSSNGNEILLHACKKQEDVLKEKS-------- 315
Query: 1000 SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRK 821
+ V+A+WL+EPDE DRI ASHFRKI+ CSCGKLE+SL YVE+SI GESFMLHQIRK
Sbjct: 316 TDSVVYAKWLYEPDESDRIGASHFRKIFRCSCGKLEKSLTHEYVELSIWGESFMLHQIRK 375
Query: 820 MVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVK 644
MVGTAVAVKRKLLP D++ LSL KFSRI+LPLAPSEVLILRGN+FS+R PG + RPE+
Sbjct: 376 MVGTAVAVKRKLLPRDILTLSLAKFSRIILPLAPSEVLILRGNRFSIRERPGNVKRPEMI 435
Query: 643 MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 464
+VESEE++K V+EF+ SVMLPQV+KFL PS PW +WI LD NT IPD EL+EVR A
Sbjct: 436 AMVESEEVIKQVDEFFTSVMLPQVAKFLEPSGYPWQEWIENLDRNTGIPDRELDEVRNAW 495
Query: 463 KLWKESF 443
K+WKE F
Sbjct: 496 KVWKEKF 502
>ref|XP_007142071.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
gi|561015204|gb|ESW14065.1| hypothetical protein
PHAVU_008G250100g [Phaseolus vulgaris]
Length = 507
Score = 492 bits (1267), Expect = e-136
Identities = 258/433 (59%), Positives = 318/433 (73%), Gaps = 1/433 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+ LSTIE ELETA+FKAGGIR+SN+GDL KI WARSSRTDKGVHSLAT++S KMEIP+N
Sbjct: 82 EHFLSTIEKELETAVFKAGGIRESNFGDLQKIKWARSSRTDKGVHSLATIVSFKMEIPEN 141
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AW DP G GLAN++N+YLP ++KV SILPSQRSFD RKEC R+YSYLLPAEIIGI++
Sbjct: 142 AWNGDPYGFGLANYVNSYLPFDIKVLSILPSQRSFDPRKECAWRKYSYLLPAEIIGIQSD 201
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
SS+ EID ++SEF+DIL FEGEHPFHNYT R+KYRK P K+ S + +
Sbjct: 202 SSNDEIDYHISEFHDILNVFEGEHPFHNYTARAKYRKHFPNKQLSSKSVERLPPYESECE 261
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR 1001
+ + + EN+ S S+ N +P G
Sbjct: 262 Y------SDEEENFEIDEAFTENIECRSQ-KCSETHNFGKPVVGSSNKNGNRLP---GQD 311
Query: 1000 SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRK 821
S L ARWL+EPDE DR++ASHFRK++ CSCGKLE SLG +Y+EISI GESFMLHQIRK
Sbjct: 312 SRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGESFMLHQIRK 371
Query: 820 MVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVK 644
MVGTAVAVKRK+LP D+I+LSL +FSRI+LPLAPSEVLILRGN+FS+R PG + RPE++
Sbjct: 372 MVGTAVAVKRKVLPKDIIKLSLARFSRIILPLAPSEVLILRGNRFSIRTRPGNVTRPEMQ 431
Query: 643 MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 464
+VESEEI K+V+ FY SVMLPQVSKFL+PS SPW +WI LDA TSIP+ +L+EVR+A
Sbjct: 432 AMVESEEINKAVDGFYTSVMLPQVSKFLDPSGSPWEEWIEKLDAYTSIPNDQLDEVRKAW 491
Query: 463 KLWKESFRIKTNV 425
L +E+ +T++
Sbjct: 492 NLLQENLESRTSI 504
>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
gi|355517306|gb|AES98929.1| Pseudouridylate synthase
[Medicago truncatula]
Length = 501
Score = 490 bits (1261), Expect = e-136
Identities = 255/427 (59%), Positives = 323/427 (75%), Gaps = 1/427 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
+NSLST+E ELE+AIFKAGGIR+SN GDL KIGWARSSRTDKGVHSLATM++ KMEIP+N
Sbjct: 79 QNSLSTVEKELESAIFKAGGIRESNLGDLEKIGWARSSRTDKGVHSLATMVAFKMEIPEN 138
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
+W +DP G LAN++N+YLP ++KV SILP+QRSFD RKECV+R+YSYLLPA+IIGI++
Sbjct: 139 SWNEDPFGFALANYVNSYLPCDIKVISILPAQRSFDPRKECVLRKYSYLLPADIIGIQSH 198
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
SS+ EID ++SEFNDILK FEG HPFHNYT RS+YR+ PR+ S +
Sbjct: 199 SSNDEIDYHMSEFNDILKEFEGGHPFHNYTSRSRYRRHIPRRP-SHSKCGEILSAYNSEQ 257
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR 1001
E +V+ ++ +N S S S E +++T K N ++S
Sbjct: 258 EDSDEEENFKVDEALTGNIECQNQKS-SGTSDSCEPVIETGNK--GNLHDQS-------- 306
Query: 1000 SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRK 821
S V A+WL+EPDE DR+ ASHFR+++ CS GKLE+S+G Y+EI I GESFMLHQIRK
Sbjct: 307 SSSVVRAKWLYEPDEADRLNASHFRRVFRCSSGKLEKSMGHSYIEIYIEGESFMLHQIRK 366
Query: 820 MVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVK 644
MV TAVAVKRKLLP D+I LSL+KFSRI+LPLAPSEVL+LRGN FS+R PG + RPE++
Sbjct: 367 MVATAVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLLLRGNSFSMRTKPGNVTRPEMQ 426
Query: 643 MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 464
+VESEEI K V++FY+SVMLPQVSKFL+PS+ PW +WI DA+TSIP+ +L+EVR+A+
Sbjct: 427 TIVESEEINKVVDDFYRSVMLPQVSKFLDPSRVPWVEWIEKFDAHTSIPNDQLDEVRKAR 486
Query: 463 KLWKESF 443
LWKE+F
Sbjct: 487 NLWKENF 493
>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
[Citrus sinensis]
Length = 539
Score = 489 bits (1258), Expect = e-135
Identities = 263/446 (58%), Positives = 317/446 (71%), Gaps = 12/446 (2%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+SLSTIE ELETA+FKAGGIR+SNYG+L KI WARSSRTDKGVHSLATMI LKMEIP +
Sbjct: 100 EHSLSTIEGELETAVFKAGGIRESNYGNLQKIAWARSSRTDKGVHSLATMICLKMEIPPD 159
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWKDDP GI LA +N +LP N+KVFSILPSQRSFD R+EC +R+YSYLLPAE+IGI +
Sbjct: 160 AWKDDPYGIDLAKRVNAHLPRNIKVFSILPSQRSFDPRRECNLRKYSYLLPAEVIGINSQ 219
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYR----------KQAPRKKDSQ-RRM 1214
++ EIDS++S+FN IL FEGEHPFHNYT RSKYR K+A KD+ R+
Sbjct: 220 LTAAEIDSHISDFNAILNEFEGEHPFHNYTERSKYRRKPHKTGCVSKRAKASKDAVFSRV 279
Query: 1213 XXXXXXXXXXXXXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFE 1034
+ + I + E N S++S HQ++
Sbjct: 280 EESEGEEDGFSKVEESDGEEDLGIGGEISSDDEKANQNSMVSG----------VHQEDCC 329
Query: 1033 NESIPPDEGARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIV 854
N+ + S + ARWL+E DE D+++ASHFRKI+ CSCGKLE+SLG YVEISI
Sbjct: 330 NQHANGLKDQNSSSVIRARWLYETDEADKLSASHFRKIFSCSCGKLEKSLGFGYVEISIS 389
Query: 853 GESFMLHQIRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRR 674
GESFMLHQIRKMVGTAVAVKRKLLP D++ LSL K SRIVLPLAPSEVL LR N FS+R
Sbjct: 390 GESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKHSRIVLPLAPSEVLFLRANSFSVRT 449
Query: 673 SPGIARPEVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPD 494
PG+ RPE++ +VESEEILK V+EFY SVMLP+VSKFL+ +KSPW +WI L+ TSIP+
Sbjct: 450 RPGVTRPEMQTMVESEEILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPN 509
Query: 493 VELEEVRRAQKLWKES-FRIKTNVPS 419
+L+EVR A +LWKE F KT V S
Sbjct: 510 EQLDEVRNAWQLWKEKRFEGKTIVES 535
>ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial [Cicer
arietinum]
Length = 474
Score = 487 bits (1254), Expect = e-135
Identities = 250/427 (58%), Positives = 319/427 (74%), Gaps = 1/427 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
++SLST+E ELE+AIFKAGGIRDSN GDL KIGWARSSRTDKGVHSLAT++S KMEIP+N
Sbjct: 51 QHSLSTVEKELESAIFKAGGIRDSNLGDLEKIGWARSSRTDKGVHSLATILSFKMEIPEN 110
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
+W DP G LAN++N+YLP ++KV SILPSQRSFD RKEC +R+YSYLLPAEIIGI++
Sbjct: 111 SWNGDPYGFSLANYVNSYLPCDIKVISILPSQRSFDPRKECNLRKYSYLLPAEIIGIQSY 170
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
SS+ EID +LSEFNDILK FEG HPFHNYT RS+YRK R++ SQ +
Sbjct: 171 SSNDEIDYHLSEFNDILKEFEGGHPFHNYTARSRYRKHF-RRRPSQSKSGESLSAYNSEY 229
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR 1001
+ +++ ++ +N + + +++ +D+ ++S
Sbjct: 230 EDSDKEENFKIDEAHTENIVCQNQKSSGTFDSCEH--LNSTGNEKDSLHDQS-------- 279
Query: 1000 SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRK 821
S L V A+WL+EPD+ DR+ ASHFR+++ C CGKLE SL +Y+EI I GESFMLHQIRK
Sbjct: 280 SRLVVRAKWLYEPDDADRLNASHFRRVFKCCCGKLERSLRHNYIEIYIEGESFMLHQIRK 339
Query: 820 MVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVK 644
MVGTAVAVKRKLLP D++ +SL+KFSRI+LPLAP EVLILRGN FS+R PG + RPE++
Sbjct: 340 MVGTAVAVKRKLLPRDIVTMSLSKFSRIILPLAPPEVLILRGNSFSMRNKPGNVTRPEMQ 399
Query: 643 MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 464
+VESEEI K V++FY SVMLPQVSKFL+ SK PW +WI LDA+TSIP+ +L+EVR+A+
Sbjct: 400 TIVESEEINKVVDDFYTSVMLPQVSKFLDSSKVPWEEWIEKLDAHTSIPNDQLDEVRKAR 459
Query: 463 KLWKESF 443
LWKE+F
Sbjct: 460 NLWKENF 466
>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
gi|550325882|gb|EEE95884.2| hypothetical protein
POPTR_0013s15030g [Populus trichocarpa]
Length = 505
Score = 486 bits (1252), Expect = e-134
Identities = 254/435 (58%), Positives = 318/435 (73%), Gaps = 1/435 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
++SL TIE ELE AI++AGGIR+SNYG+L+KI WARSSRTDKGVHSLAT I++KMEIP+N
Sbjct: 98 QHSLLTIEGELERAIYEAGGIRESNYGNLNKISWARSSRTDKGVHSLATTITMKMEIPEN 157
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWKDD G+ LA +N+YLP++++V SILP+Q+SFD R+EC +R+YSYLLPAE+IGI++
Sbjct: 158 AWKDDLYGMVLAKHVNSYLPDSIRVLSILPAQKSFDPRRECDIRKYSYLLPAEVIGIKSH 217
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S EID ++S+FN+IL +FEG+HPFHNYT+RSKYR++ P K
Sbjct: 218 FSMAEIDDHISDFNNILNAFEGDHPFHNYTVRSKYRRKYPTKNGH--------------- 262
Query: 1180 XXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR 1001
V R SG NH+ L S E + N I D+ +
Sbjct: 263 ------VSKRARSSWGTSASGSEENHVELSQNSLESSICD--------LNGDILKDQSSN 308
Query: 1000 SPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRK 821
PL ARWLHEPDE DRI A+HFRKI+ CSCGKLE+SLG +VEISI GESFMLHQIRK
Sbjct: 309 LPL--RARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEISIWGESFMLHQIRK 366
Query: 820 MVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPGIA-RPEVK 644
MVGTAVAVKRK+LP D+I LSLTKFSRIVLPLAPSEVLILRGN FSLR+ G RPE++
Sbjct: 367 MVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFSLRKKSGEGKRPEME 426
Query: 643 MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 464
+VESEEIL++VNEFY ++MLPQVSKFL+P W +W+ LD TSIPD +L+EVR A+
Sbjct: 427 TMVESEEILRAVNEFYSTMMLPQVSKFLDPCMPLWKEWVENLDKYTSIPDAQLDEVRIAR 486
Query: 463 KLWKESFRIKTNVPS 419
K+W E+F+I+ ++ S
Sbjct: 487 KVWMENFKIRKSIES 501
>ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cicer
arietinum]
Length = 483
Score = 484 bits (1247), Expect = e-134
Identities = 259/435 (59%), Positives = 315/435 (72%), Gaps = 6/435 (1%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+ LSTIE ELETAIFK GGIRDSN+GDL KI W RSSRTDKGVHSLATMIS KMEIP+N
Sbjct: 73 EHKLSTIEKELETAIFKVGGIRDSNFGDLDKINWGRSSRTDKGVHSLATMISFKMEIPEN 132
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWK D GI LAN IN+YLPN+++VFSILPS + FD R+EC +R+YSYLLPA+IIGI++
Sbjct: 133 AWKGDDYGIELANHINSYLPNSIRVFSILPSTKRFDPRRECNLRKYSYLLPADIIGIQSH 192
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S EID ++SEFN IL FEG+HPFHNYT+RS YRK+ +K
Sbjct: 193 FSEDEIDFHISEFNSILGVFEGDHPFHNYTVRSIYRKKNHARKS---------------- 236
Query: 1180 XXXXELVKNRV---NIVSVLDLSGENVNHLSLLSASDERLVDTEKKH--QDNFENESIPP 1016
+ NR +++S D E S +D+ L D E+ H Q++ E +S+
Sbjct: 237 -PGNGGMSNRTESSSLISACDSESEE-------SDADDSLSDGEQSHKPQESSEFDSL-- 286
Query: 1015 DEGARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFML 836
G S L + ARWLHEPD+ DR+ ASHFRKI CCSCGKLE LG ++VEI++ G+SFML
Sbjct: 287 -NGQNSSLGIRARWLHEPDDADRLNASHFRKILCCSCGKLETLLGYNFVEINVWGDSFML 345
Query: 835 HQIRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IA 659
HQIRKMVGTAVAVKRKL+P D++ LSL KFSRIVLP+AP EVLILRGN F R S G
Sbjct: 346 HQIRKMVGTAVAVKRKLIPRDILSLSLVKFSRIVLPIAPPEVLILRGNTF--RSSSGNCT 403
Query: 658 RPEVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEE 479
RPE+ +VESE+ILKSV+EFY SVMLP++SKFL+ SKSPW +W+ LD +SIPD +LEE
Sbjct: 404 RPEMVSMVESEQILKSVDEFYSSVMLPELSKFLDSSKSPWANWVEKLDKYSSIPDAQLEE 463
Query: 478 VRRAQKLWKESFRIK 434
VR A + WKE+FR K
Sbjct: 464 VREAWRTWKENFRAK 478
>ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Citrus sinensis] gi|568827612|ref|XP_006468145.1|
PREDICTED: putative tRNA pseudouridine synthase-like
isoform X2 [Citrus sinensis]
gi|568827614|ref|XP_006468146.1| PREDICTED: putative tRNA
pseudouridine synthase-like isoform X3 [Citrus sinensis]
Length = 605
Score = 480 bits (1235), Expect = e-133
Identities = 258/440 (58%), Positives = 311/440 (70%), Gaps = 12/440 (2%)
Frame = -3
Query: 1702 IEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDP 1523
IE ELETA+FKAGGIR+SNYG+L KI WARSSRTDKGVHSLATMI LKMEIP +AWKDDP
Sbjct: 172 IEGELETAVFKAGGIRESNYGNLQKIAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDP 231
Query: 1522 CGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEI 1343
GI LA +N +LP N+KVFSILPSQRSFD R+EC +R+YSYLLPAE+IGI + ++ EI
Sbjct: 232 YGIDLAKRVNAHLPRNIKVFSILPSQRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEI 291
Query: 1342 DSNLSEFNDILKSFEGEHPFHNYTIRSKYR----------KQAPRKKDSQ-RRMXXXXXX 1196
DS++S+FN IL FEGEHPFHNYT RSKYR K+A KD+ R+
Sbjct: 292 DSHISDFNAILNEFEGEHPFHNYTERSKYRRKPHKTGCVSKRAKASKDAVFSRVEESEGE 351
Query: 1195 XXXXXXXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPP 1016
+ + I + E N S++S HQ++ N+
Sbjct: 352 EDGFSKVEESDGEEDLGIGGEISSDDEKANQNSMVSG----------VHQEDCCNQHANG 401
Query: 1015 DEGARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFML 836
+ S + ARWL+E DE D+++ASHFRKI+ CSCGKLE+SLG YVEISI GESFML
Sbjct: 402 LKDQNSSSVIRARWLYETDEADKLSASHFRKIFSCSCGKLEKSLGFGYVEISISGESFML 461
Query: 835 HQIRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPGIAR 656
HQIRKMVGTAVAVKRKLLP D++ LSL K SRIVLPLAPSEVL LR N FS+R PG+ R
Sbjct: 462 HQIRKMVGTAVAVKRKLLPRDILTLSLAKHSRIVLPLAPSEVLFLRANSFSVRTRPGVTR 521
Query: 655 PEVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEV 476
PE++ +VESEEILK V+EFY SVMLP+VSKFL+ +KSPW +WI L+ TSIP+ +L+EV
Sbjct: 522 PEMQTMVESEEILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDEV 581
Query: 475 RRAQKLWKES-FRIKTNVPS 419
R A +LWKE F KT V S
Sbjct: 582 RNAWQLWKEKRFEGKTIVES 601
>ref|XP_007142072.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
gi|561015205|gb|ESW14066.1| hypothetical protein
PHAVU_008G250200g [Phaseolus vulgaris]
Length = 512
Score = 473 bits (1217), Expect = e-130
Identities = 247/434 (56%), Positives = 313/434 (72%), Gaps = 4/434 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E++LSTIE ELETAIF AGG+RDSN+GDL+K+ W RSSRTDKGVHSLAT+IS KMEIP+N
Sbjct: 92 EHTLSTIEKELETAIFTAGGMRDSNFGDLNKVKWGRSSRTDKGVHSLATVISFKMEIPEN 151
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWK D GI LAN IN+YLP ++VFSILPS + FD R+EC +R+YSYLLPA+IIGI++
Sbjct: 152 AWKGDDYGIALANRINSYLPYTIRVFSILPSTKRFDPRRECNLRKYSYLLPADIIGIQSH 211
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S EID ++SEFN IL FEGEHPFHNYT+RSKYRK+ ++ S
Sbjct: 212 FSKDEIDFHISEFNSILNVFEGEHPFHNYTVRSKYRKKYQVRQSS--------------- 256
Query: 1180 XXXXELVKNRV---NIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDE 1010
+++ +R+ ++ S + ++ + + S L D E+ H+ +ES
Sbjct: 257 --GSDVMSDRLGSSSLASGFESESDDSDDYDFVDGSPTTLSDKEESHKPPESSES-NGLS 313
Query: 1009 GARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQ 830
S + V ARWLHEPDE+DR+ ASHFR ++ CSCGKLE S+G YVEI I G+SFMLHQ
Sbjct: 314 SQNSNVVVRARWLHEPDEKDRLNASHFRNVFRCSCGKLETSMGYDYVEIHIWGDSFMLHQ 373
Query: 829 IRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARP 653
IRKMVGTAVAVKRKL+P DVI +SL KFSRIVLPLAP EVLILRGN F +R G R
Sbjct: 374 IRKMVGTAVAVKRKLIPKDVISVSLNKFSRIVLPLAPPEVLILRGNAFKMRSKAGNFTRQ 433
Query: 652 EVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVR 473
E+ +VESE+ILK+V+EFY V+LP+VSKFL+ S SPW W+ L+ +SIPD EL+EVR
Sbjct: 434 EMVSMVESEQILKAVDEFYTCVVLPEVSKFLDSSNSPWEKWVENLENYSSIPDGELDEVR 493
Query: 472 RAQKLWKESFRIKT 431
+A K W+E+FR+K+
Sbjct: 494 KAWKTWRENFRVKS 507
>ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
Length = 516
Score = 471 bits (1212), Expect = e-130
Identities = 247/434 (56%), Positives = 311/434 (71%), Gaps = 4/434 (0%)
Frame = -3
Query: 1720 ENSLSTIEAELETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQN 1541
E+ LST+E ELETAIF AGG+RDSN+GDL+K+ W RSSRTDKGVHSLATMI+ KMEIP+N
Sbjct: 97 EHRLSTVEKELETAIFTAGGMRDSNFGDLNKVKWGRSSRTDKGVHSLATMIAFKMEIPEN 156
Query: 1540 AWKDDPCGIGLANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENG 1361
AWK D GI LAN IN+YLPN ++VFSILPS + FD R+EC +R+YSYLLPA IIGI++
Sbjct: 157 AWKGDDYGIVLANRINSYLPNTIRVFSILPSTKRFDPRRECNLRKYSYLLPAGIIGIQSH 216
Query: 1360 SSSVEIDSNLSEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXX 1181
S EID ++SEFN IL FEGEHPFHNYT+RSKYRK+ ++ S
Sbjct: 217 FSQDEIDFHISEFNSILNVFEGEHPFHNYTVRSKYRKKYQVRQSS--------------- 261
Query: 1180 XXXXELVKNRV---NIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDE 1010
+++ +R+ ++ S + E + +S D E+ H+ +ES
Sbjct: 262 --GNDVMSDRIGSSSLTSACESESEEGDDDDFVSGRPTTFSDKEESHKPPESSES-NGLS 318
Query: 1009 GARSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQ 830
S + V A+WL+EPDE DR+ ASHFRK++ CSCGKLE SLG Y+E+ I G+SFMLHQ
Sbjct: 319 SQNSSVVVRAKWLYEPDETDRLNASHFRKVFRCSCGKLETSLGYDYIEVHIWGDSFMLHQ 378
Query: 829 IRKMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARP 653
IRKMVGTAVAVKR L+P D I LSL+KFSRIVLPLAP EVLILRGN F +R S G R
Sbjct: 379 IRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVLPLAPPEVLILRGNAFKMRASAGNFTRQ 438
Query: 652 EVKMLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVR 473
E+ +VESE+IL++V+EFY SV+LP+VSKFL+ S SPW W+ LD +SIPD EL+EVR
Sbjct: 439 EMVSMVESEQILEAVDEFYTSVVLPEVSKFLDSSNSPWAKWVENLDKYSSIPDAELDEVR 498
Query: 472 RAQKLWKESFRIKT 431
+A K WKE+FR+K+
Sbjct: 499 KAWKTWKENFRLKS 512