BLASTX nr result
ID: Cocculus23_contig00011314
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00011314
(229 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citr... 98 1e-18
ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citr... 98 1e-18
ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei... 98 1e-18
emb|CBI17535.3| unnamed protein product [Vitis vinifera] 94 2e-17
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei... 94 2e-17
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora] 93 3e-17
ref|XP_002518034.1| RNA binding protein, putative [Ricinus commu... 91 1e-16
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p... 91 1e-16
ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [A... 91 2e-16
ref|XP_007156931.1| hypothetical protein PHAVU_002G029300g [Phas... 89 5e-16
gb|EYU40151.1| hypothetical protein MIMGU_mgv1a005568mg [Mimulus... 89 6e-16
ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotei... 89 8e-16
ref|XP_006590685.1| PREDICTED: U1 small nuclear ribonucleoprotei... 88 1e-15
ref|XP_006573582.1| PREDICTED: U1 small nuclear ribonucleoprotei... 88 1e-15
ref|XP_006393869.1| hypothetical protein EUTSA_v10004249mg [Eutr... 88 1e-15
ref|XP_007204327.1| hypothetical protein PRUPE_ppa004309mg [Prun... 88 1e-15
ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotei... 88 1e-15
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei... 88 1e-15
ref|XP_006383218.1| hypothetical protein POPTR_0005s12580g [Popu... 87 2e-15
ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Popu... 87 2e-15
>ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
gi|568824794|ref|XP_006466779.1| PREDICTED: U1 small
nuclear ribonucleoprotein 70 kDa-like [Citrus sinensis]
gi|557527686|gb|ESR38936.1| hypothetical protein
CICLE_v10025502mg [Citrus clementina]
Length = 480
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDAFMRNQNAAVQARTKAQNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF 50
>ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
gi|557527685|gb|ESR38935.1| hypothetical protein
CICLE_v10025502mg [Citrus clementina]
Length = 478
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDAFMRNQNAAVQARTKAQNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF 50
>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDAFMRNQNAAVQARTKAQNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF 50
>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDA MRN NAAVQARTKAQNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF 50
>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDA MRN NAAVQARTKAQNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF 50
>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDY+DA MRNQNAAVQARTKAQNRA V+QLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYSDALMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTTNLLKLF 50
>ref|XP_002518034.1| RNA binding protein, putative [Ricinus communis]
gi|223543016|gb|EEF44552.1| RNA binding protein,
putative [Ricinus communis]
Length = 216
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDAFMRNQNAAV+ TK QNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLF 50
>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
ribonucleoprotein 70 kDa, putative [Ricinus communis]
Length = 506
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDAFMRNQNAAV+ TK QNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLF 50
>ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [Amborella trichopoda]
gi|548859890|gb|ERN17498.1| hypothetical protein
AMTR_s00059p00067090 [Amborella trichopoda]
Length = 458
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDY D +MRN++AAVQARTKAQNRA VLQLKLIGQSHPTGLTSNLLKLF
Sbjct: 1 MGDYGDVYMRNRDAAVQARTKAQNRANVLQLKLIGQSHPTGLTSNLLKLF 50
>ref|XP_007156931.1| hypothetical protein PHAVU_002G029300g [Phaseolus vulgaris]
gi|561030346|gb|ESW28925.1| hypothetical protein
PHAVU_002G029300g [Phaseolus vulgaris]
Length = 478
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/55 (83%), Positives = 49/55 (89%), Gaps = 5/55 (9%)
Frame = +3
Query: 27 MGDYN-----DAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGD+N DAFMRNQNAAVQARTKAQNR+ VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDFNNNNNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 55
>gb|EYU40151.1| hypothetical protein MIMGU_mgv1a005568mg [Mimulus guttatus]
Length = 479
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDY DA MR+QNAAVQAR KAQNRA V+QLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYGDAMMRDQNAAVQARAKAQNRANVMQLKLIGQSHPTGLTTNLLKLF 50
>ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Fragaria
vesca subsp. vesca]
Length = 509
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDY+DAFMRN NAAVQA+TKAQNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYSDAFMRN-NAAVQAKTKAQNRANVLQLKLIGQSHPTGLTTNLLKLF 49
>ref|XP_006590685.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X2 [Glycine max]
Length = 485
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/53 (86%), Positives = 48/53 (90%), Gaps = 3/53 (5%)
Frame = +3
Query: 27 MGDYN---DAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGD N DAFMRNQNAAVQARTKAQNR+ VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 53
>ref|XP_006573582.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X2 [Glycine max]
Length = 479
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/53 (86%), Positives = 48/53 (90%), Gaps = 3/53 (5%)
Frame = +3
Query: 27 MGDYN---DAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGD N DAFMRNQNAAVQARTKAQNR+ VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 53
>ref|XP_006393869.1| hypothetical protein EUTSA_v10004249mg [Eutrema salsugineum]
gi|557090508|gb|ESQ31155.1| hypothetical protein
EUTSA_v10004249mg [Eutrema salsugineum]
Length = 434
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGD +D FMRNQNAAVQARTKAQNR+ VLQLKL+GQSHPTGLT NLLKLF
Sbjct: 1 MGDLSDPFMRNQNAAVQARTKAQNRSNVLQLKLMGQSHPTGLTPNLLKLF 50
>ref|XP_007204327.1| hypothetical protein PRUPE_ppa004309mg [Prunus persica]
gi|462399858|gb|EMJ05526.1| hypothetical protein
PRUPE_ppa004309mg [Prunus persica]
Length = 517
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/56 (82%), Positives = 48/56 (85%), Gaps = 6/56 (10%)
Frame = +3
Query: 27 MGDYN------DAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYN DAFMR+QNAAVQ RTKAQNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNNNNNNNDAFMRSQNAAVQGRTKAQNRANVLQLKLIGQSHPTGLTTNLLKLF 56
>ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoformX1
[Glycine max]
Length = 482
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/53 (86%), Positives = 48/53 (90%), Gaps = 3/53 (5%)
Frame = +3
Query: 27 MGDYN---DAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGD N DAFMRNQNAAVQARTKAQNR+ VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 53
>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X1 [Glycine max]
Length = 481
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/53 (86%), Positives = 48/53 (90%), Gaps = 3/53 (5%)
Frame = +3
Query: 27 MGDYN---DAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGD N DAFMRNQNAAVQARTKAQNR+ VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLF 53
>ref|XP_006383218.1| hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
gi|550338800|gb|ERP61015.1| hypothetical protein
POPTR_0005s12580g [Populus trichocarpa]
Length = 481
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGD NDAFMRNQNAAV+ TK QNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDDNDAFMRNQNAAVRGTTKGQNRANVLQLKLIGQSHPTGLTTNLLKLF 50
>ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Populus trichocarpa]
gi|550334743|gb|EEE90671.2| hypothetical protein
POPTR_0007s12690g [Populus trichocarpa]
Length = 497
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +3
Query: 27 MGDYNDAFMRNQNAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLF 176
MGDYNDAFMRN NAAV+ K QNRA VLQLKLIGQSHPTGLT+NLLKLF
Sbjct: 1 MGDYNDAFMRNPNAAVRGSAKGQNRANVLQLKLIGQSHPTGLTANLLKLF 50