BLASTX nr result
ID: Cocculus23_contig00011262
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00011262
(672 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007018536.1| TBP-associated factor 4, putative isoform 1 ... 194 2e-47
ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citr... 185 1e-44
ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295... 185 1e-44
ref|XP_006472283.1| PREDICTED: transcription initiation factor T... 184 2e-44
ref|XP_007210386.1| hypothetical protein PRUPE_ppa001063mg [Prun... 184 2e-44
emb|CBI19420.3| unnamed protein product [Vitis vinifera] 182 1e-43
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera] 182 1e-43
ref|XP_007018537.1| TBP-associated factor 4, putative isoform 2 ... 181 1e-43
ref|XP_002510115.1| transcription initiation factor, putative [R... 180 4e-43
ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Popu... 180 4e-43
ref|XP_002302415.1| transcription initiation factor IID componen... 177 2e-42
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 177 4e-42
ref|XP_006363933.1| PREDICTED: transcription initiation factor T... 175 1e-41
ref|XP_006362063.1| PREDICTED: transcription initiation factor T... 175 1e-41
ref|XP_006578047.1| PREDICTED: transcription initiation factor T... 174 2e-41
ref|XP_003527732.1| PREDICTED: transcription initiation factor T... 173 4e-41
ref|XP_002520510.1| transcription initiation factor, putative [R... 171 2e-40
ref|XP_006601270.1| PREDICTED: transcription initiation factor T... 168 1e-39
ref|XP_006601269.1| PREDICTED: transcription initiation factor T... 168 1e-39
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262... 168 2e-39
>ref|XP_007018536.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
gi|508723864|gb|EOY15761.1| TBP-associated factor 4,
putative isoform 1 [Theobroma cacao]
Length = 950
Score = 194 bits (494), Expect = 2e-47
Identities = 112/234 (47%), Positives = 143/234 (61%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLI +LIRLSKQR+D E+ RH LITSDVR+QI+MMN
Sbjct: 719 CVEERMRGLICNLIRLSKQRVDDEKSRHRTLITSDVRQQIMMMN-RNAREEWEKKQAEAE 777
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
+KL+E NK+EDD+MRT VGGD+M SKW
Sbjct: 778 KLRKLNEPEAETAVDGDKEKDDNRVKSVKANKEEDDKMRTTAANVAARAAVGGDDMLSKW 837
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D S GK + +PLS S K+ +DNQ++E RGP ++ SG S
Sbjct: 838 QLMAEQARQKREGGMDAASGSQAGKDVNRRPLSASVKNTKDNQESEKRGP-LSPLASGAS 896
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK G+NQV+ P ++ +S+KD+IA LEREPQMSKST++Y LYE++ + A E
Sbjct: 897 RKFGRNQVITPQTRVARTISVKDVIAVLEREPQMSKSTLIYRLYEKIRSEAAAE 950
>ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citrus clementina]
gi|557535738|gb|ESR46856.1| hypothetical protein
CICLE_v10000177mg [Citrus clementina]
Length = 954
Score = 185 bits (470), Expect = 1e-44
Identities = 107/233 (45%), Positives = 143/233 (61%), Gaps = 24/233 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMN------WXXXXXXXXX 163
CVEERMRGL+ +LIRLSKQR+D E++RH +ITSD+R+QI++MN W
Sbjct: 724 CVEERMRGLLCNLIRLSKQRVDAEKIRHRTVITSDIRQQIMLMNRKAKEEWEKKQAEAEK 783
Query: 164 XXXXXXXSQ---------------KLDEVNKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQ 298
K +VNK+EDD+MRT VGGD+M SKWQ
Sbjct: 784 LRKVNEPDGDSGIDGEKEKDDGRIKSVKVNKEEDDKMRTTAANVAARAAVGGDDMFSKWQ 843
Query: 299 LMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPSR 469
LMAE+ARQK GG+D+ S GK + +PL TS ++ +DNQD E RG + +A SG R
Sbjct: 844 LMAEQARQKREGGTDMASGSQAGKDTNRRPL-TSGRNTKDNQDAEKRGQTTPSA-SGSGR 901
Query: 470 KLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
K GK Q V K+ A+++KD+IA LEREPQMSKST++Y LYE++ ++A+ E
Sbjct: 902 KFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLIYRLYEKVSSDASAE 954
>ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295421 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 185 bits (469), Expect = 1e-44
Identities = 101/234 (43%), Positives = 144/234 (61%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLI++LIRLSKQR+D E+ +H +ITSDV++QI+ N
Sbjct: 726 CVEERMRGLINNLIRLSKQRVDAEKTKHHTIITSDVQQQIMNQN-KKAKEEWEKKQAEAE 784
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
+KL+E NK++DD+MRT VGGD+M SKW
Sbjct: 785 KVRKLNEPDLSNGVDGDKDRDEGRSKSFKANKEDDDKMRTTAANVAARAAVGGDDMLSKW 844
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GGSD+ S GK + KP S + + +++NQ+ E RG + +V+G
Sbjct: 845 QLMAEQARQKREGGSDVASGSQPGKDVNRKPTSAAGRIMKNNQEAEKRGGAAPVSVAGTV 904
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK GKNQV+VP ++ ++S+KD+I+ LEREPQMSKS ++YCLYE+ +++ ++
Sbjct: 905 RKFGKNQVMVPQTRVARSISVKDVISVLEREPQMSKSPLIYCLYEKNQSDSVSD 958
>ref|XP_006472283.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Citrus sinensis]
Length = 955
Score = 184 bits (468), Expect = 2e-44
Identities = 107/230 (46%), Positives = 141/230 (61%), Gaps = 24/230 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMN------WXXXXXXXXX 163
CVEERMRGL+ +LIRLSKQR+D E++RH +ITSD+R+QI++MN W
Sbjct: 724 CVEERMRGLLCNLIRLSKQRVDAEKIRHRTVITSDIRQQIMLMNRKAKEEWEKKQAEAEK 783
Query: 164 XXXXXXXSQ---------------KLDEVNKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQ 298
K +VNK+EDD+MRT VGGD+M SKWQ
Sbjct: 784 LRKVNEPDGDSGIDGEKEKDDGRIKSVKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQ 843
Query: 299 LMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPSR 469
LMAE+ARQK GG+D+ S GK S +PL TS ++ +DNQD E RG + +A SG R
Sbjct: 844 LMAEQARQKREGGTDMASGSQAGKDTSRRPL-TSGRNTKDNQDAEKRGQTTPSA-SGSGR 901
Query: 470 KLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNA 619
K GK Q V K+ A+++KD+IA LEREPQMSKST++Y LYE++ ++A
Sbjct: 902 KFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLIYRLYEKVSSDA 951
>ref|XP_007210386.1| hypothetical protein PRUPE_ppa001063mg [Prunus persica]
gi|462406121|gb|EMJ11585.1| hypothetical protein
PRUPE_ppa001063mg [Prunus persica]
Length = 920
Score = 184 bits (468), Expect = 2e-44
Identities = 102/233 (43%), Positives = 139/233 (59%), Gaps = 24/233 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLI++LIRLSKQR+D E+ RH + TSDVR+Q++ +N
Sbjct: 688 CVEERMRGLINNLIRLSKQRVDAEKPRHHTITTSDVRQQVMNLNQNAREEFEKKQAEAEK 747
Query: 182 XSQ---------------------KLDEVNKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQ 298
+ K + NK+EDD+MRT VGGD+M SKWQ
Sbjct: 748 LRRLNEPEVNNGVDGDKDKDDGRSKSFKPNKEEDDKMRTTAANVAARAAVGGDDMLSKWQ 807
Query: 299 LMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPSR 469
LMAE+ARQK GG D+ S GK + KP ST+ + ++DNQ+ E RG A +G R
Sbjct: 808 LMAEQARQKREGGVDVASGSQPGKDVNRKPTSTAGRIMKDNQEAEKRGGGTPVAAAGTFR 867
Query: 470 KLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
K G+NQV+ P ++ ++S+KD+IA LEREPQMS+STM+Y L+ER+ ++ T E
Sbjct: 868 KCGRNQVITPQTRVARSISVKDVIAVLEREPQMSRSTMIYRLFERIQSDTTGE 920
>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 182 bits (461), Expect = 1e-43
Identities = 107/234 (45%), Positives = 138/234 (58%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEER+RG IS+LIRLSKQR DVE+ RH +ITSD+R+QIL+MN
Sbjct: 650 CVEERLRGFISNLIRLSKQRADVEKPRHRSIITSDIRQQILIMNHKAREEWEKKQAEAEK 709
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
+KL+E NK+EDD+MRT VGGD+M SKW
Sbjct: 710 L-RKLNEPEGSTGVDGDKDKDEGRVKSLKANKEEDDKMRTTAANVAARAAVGGDDMLSKW 768
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D S GK AS K STS ++ R+NQ+ E RG S + G
Sbjct: 769 QLMAEQARQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGV 828
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK G+N +VP ++ +++KD+I+ LEREPQM KST++Y LYE+M + A TE
Sbjct: 829 RKFGRNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAATE 882
>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
Length = 906
Score = 182 bits (461), Expect = 1e-43
Identities = 107/234 (45%), Positives = 138/234 (58%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEER+RG IS+LIRLSKQR DVE+ RH +ITSD+R+QIL+MN
Sbjct: 674 CVEERLRGFISNLIRLSKQRADVEKPRHRSIITSDIRQQILIMNHKAREEWEKKQAEAEK 733
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
+KL+E NK+EDD+MRT VGGD+M SKW
Sbjct: 734 L-RKLNEPEGSTGVDGDKDKDEGRVKSLKANKEEDDKMRTTAANVAARAAVGGDDMLSKW 792
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D S GK AS K STS ++ R+NQ+ E RG S + G
Sbjct: 793 QLMAEQARQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGV 852
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK G+N +VP ++ +++KD+I+ LEREPQM KST++Y LYE+M + A TE
Sbjct: 853 RKFGRNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAATE 906
>ref|XP_007018537.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
gi|508723865|gb|EOY15762.1| TBP-associated factor 4,
putative isoform 2 [Theobroma cacao]
Length = 944
Score = 181 bits (460), Expect = 1e-43
Identities = 109/234 (46%), Positives = 138/234 (58%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLI +LIRLSKQ RH LITSDVR+QI+MMN
Sbjct: 719 CVEERMRGLICNLIRLSKQS------RHRTLITSDVRQQIMMMN-RNAREEWEKKQAEAE 771
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
+KL+E NK+EDD+MRT VGGD+M SKW
Sbjct: 772 KLRKLNEPEAETAVDGDKEKDDNRVKSVKANKEEDDKMRTTAANVAARAAVGGDDMLSKW 831
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D S GK + +PLS S K+ +DNQ++E RGP ++ SG S
Sbjct: 832 QLMAEQARQKREGGMDAASGSQAGKDVNRRPLSASVKNTKDNQESEKRGP-LSPLASGAS 890
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK G+NQV+ P ++ +S+KD+IA LEREPQMSKST++Y LYE++ + A E
Sbjct: 891 RKFGRNQVITPQTRVARTISVKDVIAVLEREPQMSKSTLIYRLYEKIRSEAAAE 944
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 180 bits (456), Expect = 4e-43
Identities = 110/241 (45%), Positives = 140/241 (58%), Gaps = 32/241 (13%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLIS LIRLSKQR+D E+ RH +ITSDVR+QI+ MN
Sbjct: 692 CVEERMRGLISTLIRLSKQRVDAEKSRHRTVITSDVRQQIMTMN----QKAREEWERKQA 747
Query: 182 XSQKLDEVN-----------------------------KDEDDRMRTXXXXXXXXXXVGG 274
++KL +VN K+EDD+MRT VGG
Sbjct: 748 EAEKLRKVNEPEGDNGVEGDKEKDDGRVKAIKGNIPANKEEDDKMRTTAANVAARAAVGG 807
Query: 275 DNMQSKWQLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVA 445
D+ SKWQLMAE+ARQK GG + S K + KP TS K ++DNQ+ E R P
Sbjct: 808 DDHLSKWQLMAEQARQKREGGIEAASGSYSAKEVTRKPQFTSGKSMKDNQEPEKRSP--- 864
Query: 446 AAVSGPSRKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATT 625
AA S RK+G+NQ P +K+ ++S+KD+IAALEREPQMSKST++Y LYER+ ++A T
Sbjct: 865 AAASTGVRKVGRNQAFTPQSKVARSISVKDVIAALEREPQMSKSTLIYRLYERVQSDAPT 924
Query: 626 E 628
E
Sbjct: 925 E 925
>ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Populus trichocarpa]
gi|222861472|gb|EEE99014.1| hypothetical protein
POPTR_0014s01830g [Populus trichocarpa]
Length = 875
Score = 180 bits (456), Expect = 4e-43
Identities = 107/236 (45%), Positives = 143/236 (60%), Gaps = 27/236 (11%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLIS++IRLSKQR+D E+ RH LITSDVR+QI+ MN
Sbjct: 642 CVEERMRGLISNMIRLSKQRVDAEKPRHQTLITSDVRQQIMTMN-RKAQEELEKKQAEAE 700
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
QK++E VNK+EDD+MRT VGGD++ SKW
Sbjct: 701 KLQKVNEPEGDNGGEGEKEKDEGRVKSVKVNKEEDDKMRTTAANVAARAAVGGDDILSKW 760
Query: 296 QLMAERARQKCGGG----SDISPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGP 463
QLMAE+ARQK GG S P+ K + KPLS S +++ +N + E R V ++ SG
Sbjct: 761 QLMAEQARQKREGGMEGASGSQPV-KDVNRKPLSPSGRNMMENLEAEKRSHVVPSSASGK 819
Query: 464 S-RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
S RK G+NQ +VP K+ +S+KD+++ LEREPQMS+ST++Y LYER+ ++AT E
Sbjct: 820 SGRKCGRNQAIVPQTKVVRTISVKDVMSVLEREPQMSRSTLIYQLYERIRSDATAE 875
>ref|XP_002302415.1| transcription initiation factor IID component TAF4 family protein
[Populus trichocarpa] gi|222844141|gb|EEE81688.1|
transcription initiation factor IID component TAF4
family protein [Populus trichocarpa]
Length = 379
Score = 177 bits (450), Expect = 2e-42
Identities = 105/238 (44%), Positives = 140/238 (58%), Gaps = 29/238 (12%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLISDLIRLSKQR+D E+ RH LITSDVR+QI+ MN
Sbjct: 148 CVEERMRGLISDLIRLSKQRVDAEKPRHQTLITSDVRQQIMTMN----RKAREEWEKRQA 203
Query: 182 XSQKLDEV-------------------------NKDEDDRMRTXXXXXXXXXXVGGDNMQ 286
++KL +V NK+EDD+MRT VGGD+M
Sbjct: 204 EAEKLQKVNDPEGENGGEGDKEKDEGRVKSVKANKEEDDKMRTTAANVAARAAVGGDDML 263
Query: 287 SKWQLMAERARQK----CGGGSDISPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAV 454
SKWQLMAE+ARQK G S P+ + P S S +++++N + E R P+V +A
Sbjct: 264 SKWQLMAEQARQKREVGMEGASSSQPVND-VNRNPQSPSGRNVKENLEAEKRSPAVPSA- 321
Query: 455 SGPSRKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
SG RK G+NQ +VP K+ +++KD++A LEREPQMS+ST++Y LYER+ ++A E
Sbjct: 322 SGAVRKFGRNQAIVPQTKVVRTITVKDVMAVLEREPQMSRSTLIYQLYERIRSDAAPE 379
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 177 bits (448), Expect = 4e-42
Identities = 108/234 (46%), Positives = 138/234 (58%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEER+RG IS+LIRLSKQR DVE+ RH +ITSD+R+QIL+MN
Sbjct: 693 CVEERLRGFISNLIRLSKQRADVEKPRHRSIITSDIRQQILIMNHKAREEWEKKQAEAEK 752
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
+KL+E NK+EDD+MRT VGGD+M SKW
Sbjct: 753 L-RKLNEPEGSTGVDGDKDKDEGRVKSLKANKEEDDKMRTTAANVAARAAVGGDDMLSKW 811
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D S GK AS K STS ++ R+NQ+ E RG S VS
Sbjct: 812 QLMAEQARQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYS---TVSCGV 868
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK G+N +VP ++ +++KD+I+ LEREPQM KST++Y LYE+M + A TE
Sbjct: 869 RKFGRNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAATE 922
>ref|XP_006363933.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 405
Score = 175 bits (443), Expect = 1e-41
Identities = 102/233 (43%), Positives = 135/233 (57%), Gaps = 25/233 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLIS LIRLSKQR+D+E+ RH ++TSDVR +I+ +N
Sbjct: 170 CVEERMRGLISSLIRLSKQRVDIEKSRHRTIVTSDVREEIMSIN-RKAREEWEKKQADVE 228
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
QK +E VNKDEDD+MRT VGGD+M SKW
Sbjct: 229 KLQKANEPEGSIGVDGDKEKDEGRGKSIKVNKDEDDKMRTTAANVAARAAVGGDDMLSKW 288
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D+ S GK + K LS + RD Q+ E R S A + G
Sbjct: 289 QLMAEQARQKREGGGDVASGSQPGKDVTRKNLSAPTRSSRDPQEAEKRIQSSAISTPGAV 348
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATT 625
R+ G+ Q ++ +I ++++KD+IA LEREPQMSKST++Y LYE+ +NA++
Sbjct: 349 RRAGRTQGIITQTRIARSITVKDVIAVLEREPQMSKSTLIYRLYEKARSNASS 401
>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 934
Score = 175 bits (443), Expect = 1e-41
Identities = 102/233 (43%), Positives = 135/233 (57%), Gaps = 25/233 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLIS LIRLSKQR+D+E+ RH ++TSDVR +I+ +N
Sbjct: 699 CVEERMRGLISSLIRLSKQRVDIEKSRHRTIVTSDVREEIMSIN-RKAREEWEKKQADVE 757
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
QK +E VNKDEDD+MRT VGGD+M SKW
Sbjct: 758 KLQKANEPEGSIGVDGDKEKDEGRGKSIKVNKDEDDKMRTTAANVAARAAVGGDDMLSKW 817
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D+ S GK + K LS + +D Q+ E R S A A G
Sbjct: 818 QLMAEQARQKREGGGDVVSGSQPGKDVTRKNLSAPTRSSKDPQEAEKRIQSSAIATPGAV 877
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATT 625
R+ G+ Q ++ +I ++++KD+IA LEREPQMSKST++Y LYE+ +NA++
Sbjct: 878 RRAGRTQGIITQTRIARSITVKDVIAVLEREPQMSKSTLIYRLYEKARSNASS 930
>ref|XP_006578047.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Glycine max] gi|571449126|ref|XP_006578048.1|
PREDICTED: transcription initiation factor TFIID subunit
4b-like isoform X2 [Glycine max]
gi|571449128|ref|XP_006578049.1| PREDICTED: transcription
initiation factor TFIID subunit 4b-like isoform X3
[Glycine max]
Length = 915
Score = 174 bits (442), Expect = 2e-41
Identities = 104/234 (44%), Positives = 137/234 (58%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMN------WXXXXXXXXX 163
CVEERMRG+IS++IR+SKQR+D+E+ RH ++TSDVR+QIL MN W
Sbjct: 687 CVEERMRGVISNVIRMSKQRVDLEKTRHRTVVTSDVRQQILTMNRKAREEWEKKQAETEK 746
Query: 164 XXXXXXXS---------------QKLDEVNKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQ 298
K +VNK+ DD+MRT VGGD+M SKWQ
Sbjct: 747 LRKLNDVDCNAGIDGDKEKDEGRTKAMKVNKEVDDKMRTNAANVAARAAVGGDDMLSKWQ 806
Query: 299 LMAERARQKC-GGGSDISPLGKAA---SCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
LMAE+ARQK GGG D S + A S + STS + +DNQ E +GP+ SG
Sbjct: 807 LMAEQARQKKRGGGMDASSGSQPAKDVSHRSSSTSGRSTKDNQAREKKGPT-----SGAG 861
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK G++ P I ++S+KD+IA LEREPQMSKS++LY LYER+H++ +TE
Sbjct: 862 RKFGRSHATTPQTSIARSISVKDVIAVLEREPQMSKSSLLYRLYERIHSDTSTE 915
>ref|XP_003527732.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Glycine max] gi|571458904|ref|XP_006581258.1|
PREDICTED: transcription initiation factor TFIID subunit
4b-like isoform X2 [Glycine max]
gi|571458906|ref|XP_006581259.1| PREDICTED: transcription
initiation factor TFIID subunit 4b-like isoform X3
[Glycine max]
Length = 933
Score = 173 bits (439), Expect = 4e-41
Identities = 104/234 (44%), Positives = 136/234 (58%), Gaps = 25/234 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMN------WXXXXXXXXX 163
CVEERMRG+IS++IR+SKQR+D+E+ H ++TSDVR+QIL MN W
Sbjct: 705 CVEERMRGVISNVIRMSKQRVDLEKTSHRTVVTSDVRQQILTMNKKAREEWEKKQSETEK 764
Query: 164 XXXXXXXS---------------QKLDEVNKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQ 298
K +VNK+ DD+MRT VGGD+M SKWQ
Sbjct: 765 LRKLNDVDGNAGIDGDKEKDEGRTKATKVNKEVDDKMRTNAANVAARAAVGGDDMLSKWQ 824
Query: 299 LMAERARQKC-GGGSDISPLGKAA---SCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
LMAE+ARQK GGG D S + A S K STS + +DNQ E +GP+ SG
Sbjct: 825 LMAEQARQKKRGGGMDASSGSQPAKDVSQKSSSTSGRSTKDNQAREKKGPT-----SGAG 879
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
RK G++ P I ++S+KD+IA LEREPQMSKS++LY LYER+H++ +TE
Sbjct: 880 RKFGRSHATTPQNSIARSISVKDVIAVLEREPQMSKSSLLYRLYERIHSDTSTE 933
>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
gi|223540352|gb|EEF41923.1| transcription initiation
factor, putative [Ricinus communis]
Length = 927
Score = 171 bits (433), Expect = 2e-40
Identities = 104/228 (45%), Positives = 135/228 (59%), Gaps = 19/228 (8%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGL+S LIRLSKQRID E+ +H +I+SDVR+QI+ MN
Sbjct: 659 CVEERMRGLVSTLIRLSKQRIDAEKPKHRTVISSDVRQQIMTMN-RKAKEEWDKKQAESE 717
Query: 182 XSQKLDEV----------------NKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQLMAER 313
QK++EV +K+EDD+MRT VGGD+M SKWQLM E+
Sbjct: 718 MLQKVNEVEGDKEKDEGRAKPVKASKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMVEQ 777
Query: 314 ARQKCGGGSDISP---LGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPSRKLGKN 484
ARQK G + + K KPL TS K ++D Q+ E R AA S +R+ G+N
Sbjct: 778 ARQKREAGPEAASGIQSAKDVFGKPLLTSGKAVKDGQEPEKRS---AAVTSTGARRFGRN 834
Query: 485 QVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATTE 628
Q V P + ++S+KD+IAALEREPQMSKST++Y LYERM ++A E
Sbjct: 835 QSVAPQTRPARSISVKDVIAALEREPQMSKSTLIYRLYERMQSDALIE 882
>ref|XP_006601270.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X2 [Glycine max]
Length = 936
Score = 168 bits (426), Expect = 1e-39
Identities = 97/230 (42%), Positives = 136/230 (59%), Gaps = 24/230 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMN------WXXXXXXXXX 163
CVEERMRGLIS+LIR+SKQR+D E+ RH ++TSDVR+QI+ +N W
Sbjct: 706 CVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVRKEWDIKQAEAEK 765
Query: 164 XXXXXXXSQ---------------KLDEVNKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQ 298
K +VNK+ED++MRT GGD+M SKWQ
Sbjct: 766 IRKLHNVDSNTGVDGDKEKDDGRGKSTKVNKEEDEKMRTNAANVAARAAYGGDDMMSKWQ 825
Query: 299 LMAERARQKCGGGSDISPLGKAA---SCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPSR 469
LMAE+A+QK GG D+S + A + K LSTS + +DNQ+ E +G S A S +R
Sbjct: 826 LMAEQAKQKREGGVDVSSGSQPAKDVNRKSLSTSGRSTKDNQEGEKKGSSTFIA-SSVAR 884
Query: 470 KLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNA 619
KLG++ + ++ ++S+KD+IA LEREP MSKS +++ LYER+H++A
Sbjct: 885 KLGRSHAMASQTRVARSISVKDVIAVLEREPHMSKSPLIHRLYERIHSDA 934
>ref|XP_006601269.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Glycine max]
Length = 976
Score = 168 bits (426), Expect = 1e-39
Identities = 97/230 (42%), Positives = 136/230 (59%), Gaps = 24/230 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMN------WXXXXXXXXX 163
CVEERMRGLIS+LIR+SKQR+D E+ RH ++TSDVR+QI+ +N W
Sbjct: 746 CVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVRKEWDIKQAEAEK 805
Query: 164 XXXXXXXSQ---------------KLDEVNKDEDDRMRTXXXXXXXXXXVGGDNMQSKWQ 298
K +VNK+ED++MRT GGD+M SKWQ
Sbjct: 806 IRKLHNVDSNTGVDGDKEKDDGRGKSTKVNKEEDEKMRTNAANVAARAAYGGDDMMSKWQ 865
Query: 299 LMAERARQKCGGGSDISPLGKAA---SCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPSR 469
LMAE+A+QK GG D+S + A + K LSTS + +DNQ+ E +G S A S +R
Sbjct: 866 LMAEQAKQKREGGVDVSSGSQPAKDVNRKSLSTSGRSTKDNQEGEKKGSSTFIA-SSVAR 924
Query: 470 KLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNA 619
KLG++ + ++ ++S+KD+IA LEREP MSKS +++ LYER+H++A
Sbjct: 925 KLGRSHAMASQTRVARSISVKDVIAVLEREPHMSKSPLIHRLYERIHSDA 974
>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
lycopersicum]
Length = 934
Score = 168 bits (425), Expect = 2e-39
Identities = 100/233 (42%), Positives = 133/233 (57%), Gaps = 25/233 (10%)
Frame = +2
Query: 2 CVEERMRGLISDLIRLSKQRIDVERLRHSVLITSDVRRQILMMNWXXXXXXXXXXXXXXX 181
CVEERMRGLIS LIRLSKQR+D+E+ RH ++TSDVR +I+ +N
Sbjct: 699 CVEERMRGLISSLIRLSKQRVDIEKSRHRTIVTSDVREEIMSIN-RKAREEWERKQADVE 757
Query: 182 XSQKLDE----------------------VNKDEDDRMRTXXXXXXXXXXVGGDNMQSKW 295
QK +E VNK+EDD+MRT VGGD+M SKW
Sbjct: 758 KLQKANEPEGSTGVDGDKEKDEGRGKSIKVNKEEDDKMRTTAANVAARAAVGGDDMLSKW 817
Query: 296 QLMAERARQKCGGGSDI---SPLGKAASCKPLSTSEKDLRDNQDTESRGPSVAAAVSGPS 466
QLMAE+ARQK GG D+ S GK + K L + RD Q+ E R S A A G
Sbjct: 818 QLMAEQARQKREGGGDVASGSQPGKDVTRKNLPAPPRSSRDPQEAEKRIQSSAIAPPGVV 877
Query: 467 RKLGKNQVVVPPAKITHAVSIKDLIAALEREPQMSKSTMLYCLYERMHTNATT 625
R+ + Q ++ +I ++++KD+IA LEREPQMSKST++Y LYE+ +NA++
Sbjct: 878 RRAVRTQGIITQTRIARSITVKDVIAVLEREPQMSKSTLIYRLYEKARSNASS 930