BLASTX nr result
ID: Cocculus23_contig00011030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00011030
(219 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD13527.1| omega-3 fatty acid desaturase precursor [Vernicia... 69 9e-10
ref|XP_007205175.1| hypothetical protein PRUPE_ppa005574mg [Prun... 66 6e-09
emb|CBI25467.3| unnamed protein product [Vitis vinifera] 65 1e-08
ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, ch... 64 2e-08
ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, ch... 64 2e-08
emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera] 64 2e-08
ref|XP_006481053.1| PREDICTED: omega-3 fatty acid desaturase, ch... 62 6e-08
gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var.... 62 6e-08
ref|XP_007026676.1| Omega-3 fatty acid desaturase isoform 3 [The... 62 1e-07
ref|XP_007026674.1| Fatty acid desaturase 8 isoform 1 [Theobroma... 62 1e-07
ref|XP_006429411.1| hypothetical protein CICLE_v10011691mg [Citr... 61 1e-07
ref|XP_006429410.1| hypothetical protein CICLE_v10011691mg [Citr... 61 1e-07
ref|XP_006429409.1| hypothetical protein CICLE_v10011691mg [Citr... 61 1e-07
ref|XP_006429408.1| hypothetical protein CICLE_v10011691mg [Citr... 61 1e-07
ref|XP_006429407.1| hypothetical protein CICLE_v10011691mg [Citr... 61 1e-07
gb|AGQ56866.1| omega-3 fatty acid desaturase [Camellia sinensis] 60 3e-07
gb|AAN17502.1| omega-3 fatty acid desaturase [Betula pendula] 59 5e-07
gb|AGJ70389.1| omega-3 fatty acid desaturase [Perilla frutescens] 58 1e-06
gb|AAS59833.1| chloroplast omega-3 desaturase [Malus domestica] 58 1e-06
sp|P48621.1|FAD3C_SOYBN RecName: Full=Omega-3 fatty acid desatur... 58 2e-06
>gb|AAD13527.1| omega-3 fatty acid desaturase precursor [Vernicia fordii]
Length = 437
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +3
Query: 51 GSRRTRDWGLKVSAPLKVAFLD-EEDRNEEKINGSVKRVGDEDKFNPGAPPPFKLAD 218
G R RDWG+KVSAP +V+ ++ EE+ EE ING + G+E +F+PGAPPPFKL+D
Sbjct: 38 GCFRERDWGIKVSAPYRVSSIEGEEEEREEGINGVIGIEGEETEFDPGAPPPFKLSD 94
>ref|XP_007205175.1| hypothetical protein PRUPE_ppa005574mg [Prunus persica]
gi|462400817|gb|EMJ06374.1| hypothetical protein
PRUPE_ppa005574mg [Prunus persica]
Length = 453
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDED--KFNPGAPPPFKLAD 218
R R WGLKVSAPLKVA +++E +E++NG V VGDE+ +F+PGAPPPFKLAD
Sbjct: 59 RGRSWGLKVSAPLKVASIEDE---KERVNG-VNGVGDEEELEFDPGAPPPFKLAD 109
>emb|CBI25467.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +3
Query: 36 SLSLFGSRRTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDED-KFNPGAPPPFKL 212
SL + G R+R+WGLKVSAPL V +DEE R E ING V D D F+PGAPPPF+L
Sbjct: 48 SLWVSGGSRSREWGLKVSAPLMVGSVDEEFREGEAING----VSDGDGGFDPGAPPPFRL 103
Query: 213 AD 218
A+
Sbjct: 104 AE 105
>ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
vinifera]
Length = 452
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = +3
Query: 21 KADLNSLSLFGSRRTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDEDKFNPGAPP 200
K DL G + R+W LKVSAPL+V + +EE+R E I V V ++ +F+PGAPP
Sbjct: 45 KTDLKFREPIGCSKERNWALKVSAPLRVEYGEEEERGE--IINRVNGVEEQPEFDPGAPP 102
Query: 201 PFKLAD 218
PFKLAD
Sbjct: 103 PFKLAD 108
>ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
vinifera]
Length = 456
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +3
Query: 36 SLSLFGSRRTRDWGLKVSAPLKVAFLDEEDRNEEKING-SVKRVGDED---KFNPGAPPP 203
SL + G R+R+WGLKVSAPL V +DEE R E ING S +G+ D F+PGAPPP
Sbjct: 48 SLWVSGGSRSREWGLKVSAPLMVGSVDEEFREGEAINGVSELGLGEGDGDGGFDPGAPPP 107
Query: 204 FKLAD 218
F+LA+
Sbjct: 108 FRLAE 112
>emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera]
Length = 452
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = +3
Query: 21 KADLNSLSLFGSRRTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDEDKFNPGAPP 200
K DL G + R+W LKVSAPL+V + +EE+R E I V V ++ +F+PGAPP
Sbjct: 45 KTDLKFREPIGCSKERNWALKVSAPLRVXYGEEEERGE--IINRVNGVEEQPEFDPGAPP 102
Query: 201 PFKLAD 218
PFKLAD
Sbjct: 103 PFKLAD 108
>ref|XP_006481053.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like
[Citrus sinensis]
Length = 457
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKIN-----GSVKRVGDED--KFNPGAPPPFKLAD 218
R R+WGLKVSAPL+VA L+ ED EE+IN G+ K V +E+ +F+PGAPPPFKLAD
Sbjct: 55 RDRNWGLKVSAPLRVAPLEGED-EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
>gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var. sarcodactylis]
Length = 457
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKIN-----GSVKRVGDED--KFNPGAPPPFKLAD 218
R R+WGLKVSAPL+VA L+ ED EE+IN G+ K V +E+ +F+PGAPPPFKLAD
Sbjct: 55 RDRNWGLKVSAPLRVAPLEGED-EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
>ref|XP_007026676.1| Omega-3 fatty acid desaturase isoform 3 [Theobroma cacao]
gi|508715281|gb|EOY07178.1| Omega-3 fatty acid
desaturase isoform 3 [Theobroma cacao]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
Frame = +3
Query: 66 RDWGLKVSAPLKVAFLDEEDRNEEKI---NGSVKRVGDEDKFNPGAPPPFKLAD 218
R+WGLKVSAPLKVA ++E++ EE+I NG ++ +E F+PGAPPPFKL+D
Sbjct: 61 RNWGLKVSAPLKVASIEEDEEREERIRYVNGFGEQ-EEESGFDPGAPPPFKLSD 113
>ref|XP_007026674.1| Fatty acid desaturase 8 isoform 1 [Theobroma cacao]
gi|590628279|ref|XP_007026675.1| Fatty acid desaturase 8
isoform 1 [Theobroma cacao] gi|508715279|gb|EOY07176.1|
Fatty acid desaturase 8 isoform 1 [Theobroma cacao]
gi|508715280|gb|EOY07177.1| Fatty acid desaturase 8
isoform 1 [Theobroma cacao]
Length = 455
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
Frame = +3
Query: 66 RDWGLKVSAPLKVAFLDEEDRNEEKI---NGSVKRVGDEDKFNPGAPPPFKLAD 218
R+WGLKVSAPLKVA ++E++ EE+I NG ++ +E F+PGAPPPFKL+D
Sbjct: 61 RNWGLKVSAPLKVASIEEDEEREERIRYVNGFGEQ-EEESGFDPGAPPPFKLSD 113
>ref|XP_006429411.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|567873645|ref|XP_006429412.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
gi|557531468|gb|ESR42651.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
gi|557531469|gb|ESR42652.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 354
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKIN-----GSVKRVGDED--KFNPGAPPPFKLAD 218
R ++WGLKVSAPL+VA L+ ED EE+IN G+ K V +E+ +F+PGAPPPFKLAD
Sbjct: 55 RDKNWGLKVSAPLRVAPLEGED-EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
>ref|XP_006429410.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531467|gb|ESR42650.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 256
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKIN-----GSVKRVGDED--KFNPGAPPPFKLAD 218
R ++WGLKVSAPL+VA L+ ED EE+IN G+ K V +E+ +F+PGAPPPFKLAD
Sbjct: 55 RDKNWGLKVSAPLRVAPLEGED-EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
>ref|XP_006429409.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531466|gb|ESR42649.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 457
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKIN-----GSVKRVGDED--KFNPGAPPPFKLAD 218
R ++WGLKVSAPL+VA L+ ED EE+IN G+ K V +E+ +F+PGAPPPFKLAD
Sbjct: 55 RDKNWGLKVSAPLRVAPLEGED-EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
>ref|XP_006429408.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531465|gb|ESR42648.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 430
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKIN-----GSVKRVGDED--KFNPGAPPPFKLAD 218
R ++WGLKVSAPL+VA L+ ED EE+IN G+ K V +E+ +F+PGAPPPFKLAD
Sbjct: 55 RDKNWGLKVSAPLRVAPLEGED-EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
>ref|XP_006429407.1| hypothetical protein CICLE_v10011691mg [Citrus clementina]
gi|557531464|gb|ESR42647.1| hypothetical protein
CICLE_v10011691mg [Citrus clementina]
Length = 334
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKIN-----GSVKRVGDED--KFNPGAPPPFKLAD 218
R ++WGLKVSAPL+VA L+ ED EE+IN G+ K V +E+ +F+PGAPPPFKLAD
Sbjct: 55 RDKNWGLKVSAPLRVAPLEGED-EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
>gb|AGQ56866.1| omega-3 fatty acid desaturase [Camellia sinensis]
Length = 452
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDEDKFNPGAPPPFKLAD 218
R R+W +KVS PLKV ++EE+ E K V V +E +FNPGA PPF+LAD
Sbjct: 56 RERNWKIKVSTPLKVQSIEEEEERETKKINGVNGVEEEAEFNPGAAPPFRLAD 108
>gb|AAN17502.1| omega-3 fatty acid desaturase [Betula pendula]
Length = 455
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +3
Query: 51 GSRRTRDWGLKVSAPLKVAFLDEEDRNEEKING-SVKRVGDEDKFNPGAPPPFKLAD 218
G R R+WGLKVSAP +VA ++ E+ EE+ING + + +E F+PGAPPPF L++
Sbjct: 55 GCLRERNWGLKVSAPWRVASVEGEEEREERINGVNGFKEEEEPGFDPGAPPPFNLSN 111
>gb|AGJ70389.1| omega-3 fatty acid desaturase [Perilla frutescens]
Length = 438
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +3
Query: 33 NSLSLFGSRRTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDEDKFNPGAPPPFKL 212
+S SL G R R+WGLKVSAPL+ F + E+ +EE+ GSV V D+F+PGAPPPFKL
Sbjct: 46 SSFSLVG--RERNWGLKVSAPLR--FQEVEEESEER--GSVL-VNGVDEFDPGAPPPFKL 98
Query: 213 AD 218
+D
Sbjct: 99 SD 100
>gb|AAS59833.1| chloroplast omega-3 desaturase [Malus domestica]
Length = 439
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +3
Query: 27 DLNSLSLFGSRRTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDEDKFNPGAPPPF 206
++ S +L G R + W L VSAPL+V +D ED + NG VGD +F+PGAPPPF
Sbjct: 37 NVRSTNLLGFRGAK-WSLNVSAPLRVPSVDGEDNGKVSTNG----VGDGGEFDPGAPPPF 91
Query: 207 KLAD 218
KL D
Sbjct: 92 KLGD 95
>sp|P48621.1|FAD3C_SOYBN RecName: Full=Omega-3 fatty acid desaturase, chloroplastic; Flags:
Precursor gi|408792|gb|AAA61776.1| omega-3 fatty acid
desaturase [Glycine soja]
Length = 453
Score = 57.8 bits (138), Expect = 2e-06
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = +3
Query: 60 RTRDWGLKVSAPLKVAFLDEEDRNEEKINGSVKRVGDE--DKFNPGAPPPFKLAD 218
R R+WGLKVSAPL+VA ++EE ++ + NG+ V E +F+PGAPPPF LAD
Sbjct: 55 RERNWGLKVSAPLRVASIEEEQKSVDLTNGT-NGVEHEKLPEFDPGAPPPFNLAD 108