BLASTX nr result
ID: Cocculus23_contig00010985
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00010985
(2131 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 457 e-125
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 442 e-121
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 425 e-116
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 424 e-116
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 417 e-113
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ... 409 e-111
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 405 e-110
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 403 e-109
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p... 392 e-106
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 387 e-104
ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prun... 386 e-104
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p... 385 e-104
ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutr... 381 e-103
ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|1017... 377 e-102
ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arab... 375 e-101
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 374 e-100
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 372 e-100
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s... 369 2e-99
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 367 1e-98
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 367 2e-98
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 457 bits (1175), Expect = e-125
Identities = 268/582 (46%), Positives = 356/582 (61%), Gaps = 44/582 (7%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 1494
F PPTD +++Y+LQYPLRP WRPYEL ERC EVR KP S+++EVDLS+DVD+ NYD
Sbjct: 110 FTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPD 169
Query: 1493 VPEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHL-KGGLKKK 1320
P R+ KQTL TS KPP T Y +G+L NKLHLNPIH VVQLRPSME+L GG K+K
Sbjct: 170 APNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRK 229
Query: 1319 IDVA-------------EEKTTGPSKKQGKAVKTSAEQNTD-VESWLSLEYHGPDSSLAR 1182
+V EE++ G KKQ K + EQNTD ESW+ L+YH +S +
Sbjct: 230 NNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSA 289
Query: 1181 RYREKMVSINDSQIHFSMNPFDYINSLCPVPALQG--NRMGXXXXXXXXXXXXXXRIKTL 1008
RY +KMV+ ++S I F M+P++Y+NSLCP P + NR R KTL
Sbjct: 290 RYLQKMVAEDNSPIQFLMSPYEYVNSLCP-PGVSNDDNRSKGLSRRFLLSMPLEERFKTL 348
Query: 1007 LSEVPQVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALLKLKGMDAA--IRD 834
L E P V++F++LK+FAPD+S D L +L HA LVQGLWVPKS+LL G A RD
Sbjct: 349 LCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARD 408
Query: 833 YVLLLFSKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPH 654
Y+LLLFSK +I+ Q++ G + L+ A+ RP DWKFK D F+K +P
Sbjct: 409 YILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPD 468
Query: 653 IVMNQEQGWTYRERRIMEAV---------------------GGELSAKQGSKRGVNGKTS 537
IV Q + W E++I + + G + G+ R NG T
Sbjct: 469 IVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNG-TP 527
Query: 536 LGTAAIADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXX 357
+ A++ ETREAL KA+ E+F HKVCS QLI Q+LRD A++KS + K
Sbjct: 528 VRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAY 587
Query: 356 XXXAFPQELQSIVNQIAINIHGVYVAKSSEN--QNPLRDVVINLFRGKEPNTKLRKADII 183
A +EL +I+++ A +HGVYV K+SE+ NPLR VV++LF GKEPN KL++ADI+
Sbjct: 588 GADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIM 647
Query: 182 EAAKFSFHKDYSDTPEYSQVLNELCVSERNAWVLKNGDGKPQ 57
EAAK + K+ + T EY++V++ELC S + WVLK+GDGKP+
Sbjct: 648 EAAKIALKKEIT-THEYNKVVSELCESRGSLWVLKSGDGKPK 688
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 442 bits (1136), Expect = e-121
Identities = 259/571 (45%), Positives = 350/571 (61%), Gaps = 33/571 (5%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 1494
F PPTD +++Y+LQYPLRP WRPYEL ERC EVR KP S+++EVDLS+DVD+ NYD
Sbjct: 110 FTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPD 169
Query: 1493 VPEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHL-KGGLKKK 1320
P R+ KQTL TS KPP T Y +G+L NKLHLNPIH VVQLRPSME+L GG K+K
Sbjct: 170 APNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRK 229
Query: 1319 IDVAEEKTTGPSKKQGKAVKTSAEQNT---DVESWLSLEYHGPDSSLARRYREKMVSIND 1149
+V TG + K ++ E++ +SW+ L+YH +S + RY +KMV+ ++
Sbjct: 230 NNV-----TGDTNSAVKLEVSNEEESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDN 284
Query: 1148 SQIHFSMNPFDYINSLCPVPALQG--NRMGXXXXXXXXXXXXXXRIKTLLSEVPQVYQFN 975
S I F M+P++Y+NSLCP P + NR R KTLL E P V++F+
Sbjct: 285 SPIQFLMSPYEYVNSLCP-PGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFS 343
Query: 974 SLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALLKLKGMDAA--IRDYVLLLFSKNIV 801
+LK+FAPD+S D L +L HA LVQGLWVPKS+LL G A RDY+LLLFSK +
Sbjct: 344 ALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPL 403
Query: 800 ISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQGWTY 621
I+ Q++ G + L+ A+ RP DWKFK D F+K +P IV Q + W
Sbjct: 404 INYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWES 463
Query: 620 RERRIMEAV---------------------GGELSAKQGSKRGVNGKTSLGTAAIADETR 504
E++I + + G + G+ R NG T + A++ ETR
Sbjct: 464 LEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNG-TPVRRTAMSAETR 522
Query: 503 EALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQELQS 324
EAL KA+ E+F HKVCS QLI Q+LRD A++KS + K A +EL +
Sbjct: 523 EALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHA 582
Query: 323 IVNQIAINIHGVYVAKSSEN--QNPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHKDY 150
I+++ A +HGVYV K+SE+ NPLR VV++LF GKEPN KL++ADI+EAAK + K+
Sbjct: 583 IISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEI 642
Query: 149 SDTPEYSQVLNELCVSERNAWVLKNGDGKPQ 57
+ T EY++V++ELC S + WVLK+GDGKP+
Sbjct: 643 T-THEYNKVVSELCESRGSLWVLKSGDGKPK 672
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 425 bits (1093), Expect = e-116
Identities = 248/577 (42%), Positives = 336/577 (58%), Gaps = 44/577 (7%)
Frame = -3
Query: 1664 SPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTSVP 1488
+P DS S+LY+LQYPLRPRWRPYE + RC EVR KP + ++EVDL++D++ NNYD
Sbjct: 129 TPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKAD 188
Query: 1487 EKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHL-KGGLKKKID 1314
++ KQTLTSS +PPLATSYA+G+L NKLHLNP+H VVQLRPS EHL GG K+K +
Sbjct: 189 GTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKNN 248
Query: 1313 V-----------AEEKTTGPSKKQGKAVKTSAEQNT-DVESWLSLEYHGPDSSLARRYRE 1170
V + + G S+KQ K S E T D E W+ L+Y+G +S L+ R+ +
Sbjct: 249 VRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTRHLQ 308
Query: 1169 KMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQ 990
MVS S + FSM+P DY++SLCP + GN+ RIK LL+E P
Sbjct: 309 SMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTEGPP 368
Query: 989 VYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSA-LLKLKGMDAAIRDYVLLLFS 813
V +F++LK++APD +F+ LQ +A LVQGLWVPKS L+ G RD+VL LFS
Sbjct: 369 VQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCARDFVLFLFS 428
Query: 812 KNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQ 633
KN V+SS Q+ + H LN F + RP DWKFK D LFL N+ I QE+
Sbjct: 429 KNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEE 488
Query: 632 GWTYRER-------------------------RIMEAVGGELSAKQGSKRGVNGKTSLGT 528
W E+ ++ + V + + + S +N K
Sbjct: 489 LWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRK----- 543
Query: 527 AAIADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXX 348
A++DETREAL KA+ ++F NHKVCS QLI Q LRD A+++S K
Sbjct: 544 GAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVD 603
Query: 347 AFPQELQSIVNQIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEA 177
A P EL+ I++Q+A IHG+YV SS +PLR VVI L RG+ P L+KAD++EA
Sbjct: 604 APPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEA 663
Query: 176 AKFSFHKDYSDTPEYSQVLNELCVSERNAWVLKNGDG 66
+K + + EYS+V+NE+C+S ++W LK+GDG
Sbjct: 664 SKHELGRAINSN-EYSKVMNEICISHGSSWTLKSGDG 699
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 424 bits (1091), Expect = e-116
Identities = 248/577 (42%), Positives = 335/577 (58%), Gaps = 44/577 (7%)
Frame = -3
Query: 1664 SPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTSVP 1488
+P DS S+LY+LQYPLRPRWRPYE + RC EVR KP + ++EVDL++D++ NNYD
Sbjct: 129 TPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKAD 188
Query: 1487 EKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHL-KGGLKKKID 1314
++ KQTLTSS +PPLATSYA+G+L NKLHLNP+H VVQLRPS EHL GG K+K +
Sbjct: 189 GTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKNN 248
Query: 1313 V-----------AEEKTTGPSKKQGKAVKTSAEQNT-DVESWLSLEYHGPDSSLARRYRE 1170
V + + G S+KQ K S E T D E W+ L+Y+G +S L+ R+ +
Sbjct: 249 VRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTRHLQ 308
Query: 1169 KMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQ 990
MVS S + FSM+P DY++SLCP + GN+ RIK LL+E P
Sbjct: 309 SMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTEGPP 368
Query: 989 VYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSA-LLKLKGMDAAIRDYVLLLFS 813
V +F++LK++APD +F+ LQ +A LVQGLWVPKS L+ G RD+VL LFS
Sbjct: 369 VQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCARDFVLFLFS 428
Query: 812 KNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQ 633
KN V+SS Q+ + H LN F + RP DWKFK D LFL N+ I QE+
Sbjct: 429 KNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEE 488
Query: 632 GWTYRER-------------------------RIMEAVGGELSAKQGSKRGVNGKTSLGT 528
W E+ ++ + V + + + S +N K
Sbjct: 489 LWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRK----- 543
Query: 527 AAIADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXX 348
A++DETREAL KA+ ++F NHKVCS QLI Q LRD A+++S K
Sbjct: 544 GAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVD 603
Query: 347 AFPQELQSIVNQIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEA 177
A P EL I++Q+A IHG+YV SS +PLR VVI L RG+ P L+KAD++EA
Sbjct: 604 APPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEA 663
Query: 176 AKFSFHKDYSDTPEYSQVLNELCVSERNAWVLKNGDG 66
+K + + EYS+V+NE+C+S ++W LK+GDG
Sbjct: 664 SKHELGRAINSN-EYSKVMNEICISHGSSWTLKSGDG 699
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 417 bits (1071), Expect = e-113
Identities = 240/557 (43%), Positives = 334/557 (59%), Gaps = 20/557 (3%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDNNYDTSV 1491
+ +P D +QLY++QYPLRP WRPYELDERC+EVR KP+S+++EVDLS+D NYD +
Sbjct: 118 YYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSIDDTKNYDPDI 177
Query: 1490 PEKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKK--- 1323
+L + KQTL+SS PP AT YA+G+L NKLHLNPIH VVQLRPSM++L G K
Sbjct: 178 ASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKK 237
Query: 1322 ----KIDVAEEKTTGPSKKQGKAVKTSAEQNTDV-ESWLSLEYHGPDSSLARRYREKMVS 1158
D E K G KKQ K + + EQ DV ESW+ L+YHG S L+ RY + MV+
Sbjct: 238 NATSGEDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSSRYLQNMVA 297
Query: 1157 INDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQVYQF 978
S I F+MNP+DY++SLCP + ++ RIK L E P +++F
Sbjct: 298 PESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRF 357
Query: 977 NSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL-----KLKGMDAAIRDYVLLLFS 813
+L++ P+DS D L +LQ + LVQGLWVPK++LL + + A RDY+LLLFS
Sbjct: 358 AALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFS 417
Query: 812 KNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQ 633
K++V++ +L + + + LN FA+ RP DWKFK DTLF++ YP IV QEQ
Sbjct: 418 KSLVVTPSELNVPMKPL-ILKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQ 476
Query: 632 GWTYRERRIMEAVGGELSAKQGSKRGVNGKTSLGTAAIADETREALSKAVMEIFSNHKVC 453
W + I A + + K SK + + DETREAL KA+ ++ HKVC
Sbjct: 477 AWEVMGKNISAAF--DRAGKSVSKNVITKPKK----TMTDETREALRKALPKVLQTHKVC 530
Query: 452 --SLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQELQSIVNQIAINIHGVYVA 279
Q+I Q LR A+++S K A P+ELQ +++++A NIHG YV
Sbjct: 531 RYGFQMICQGLRQLAISQSTLPKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVL 590
Query: 278 KSSENQ---NPL-RDVVINLFRGKEPNTKLRKADIIEAAKFSFHKDYSDTPEYSQVLNEL 111
KSS +PL R VVI LF + PN ++K+++ AA+ ++ S++ EY +V+ +L
Sbjct: 591 KSSPEHPDFDPLSRKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNS-EYIKVMTDL 649
Query: 110 CVSERNAWVLKNGDGKP 60
C S+ +AWVLK+GDGKP
Sbjct: 650 CESKGSAWVLKSGDGKP 666
>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
gi|508699252|gb|EOX91148.1| SIN-like family protein,
putative isoform 1 [Theobroma cacao]
Length = 700
Score = 409 bits (1050), Expect = e-111
Identities = 250/577 (43%), Positives = 342/577 (59%), Gaps = 40/577 (6%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 1494
F +P D+ +QLY+LQYPLRP WRPYELDERC EVR KP S ++E+DL++DVD NNYD+
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187
Query: 1493 VPEKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
+L++TKQTL+SS PP T YA+G+L +KLHLNPIH VVQLRPSM HLK + K+
Sbjct: 188 RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247
Query: 1316 DVA--------------EEKTTGPSKKQGKAVKTSAEQNT-DVESWLSLEYHGPDSSLAR 1182
+ A + K G S KQ K +++S EQ D E W+ L+YH + +
Sbjct: 248 NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307
Query: 1181 RYREKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLS 1002
+Y ++M++ +I F+M+P+DY++SLCP A N+ R+K LLS
Sbjct: 308 QYLQRMMAEESCRIQFTMSPYDYVDSLCP-GASNNNKAQGPSRRLLLSIPLEERLKKLLS 366
Query: 1001 EVPQVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALLKLKG-MDAAIRDYVL 825
E P ++F++LK+FAPD S D +LQ HA LVQGLWVPKS+LL + + RDYVL
Sbjct: 367 EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426
Query: 824 LLFSKNIVISSKQLEG-SGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIV 648
LLFSKN +IS Q+ S R E L AI RP DWK K D F K YP IV
Sbjct: 427 LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486
Query: 647 MNQEQGWTYRERRIME-----AVGGELSAKQGS----KRGVNGKTSLGTAA--------I 519
NQEQ W E ++ A GG K G+ ++ +N + A +
Sbjct: 487 KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTM 546
Query: 518 ADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFP 339
+DETREA+ KA+ ++F HKVCSLQLI + LRD AL++S K A
Sbjct: 547 SDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGADAPE 606
Query: 338 QELQSIVNQIAINIH-GVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEAAK 171
ELQ +V+++A+ +H G++V +SS +PLR+VVINL R K KL+KAD+ AA
Sbjct: 607 HELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---GKLKKADVSAAAL 663
Query: 170 FSFHKDYSDTPEYSQVLNELCVSERNAWVLKNGDGKP 60
S ++ S+ EY++V+++ C + + WVLK+GDGKP
Sbjct: 664 LSLKREISNN-EYNKVMSDFCEYKSSWWVLKSGDGKP 699
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 405 bits (1041), Expect = e-110
Identities = 236/570 (41%), Positives = 336/570 (58%), Gaps = 39/570 (6%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 1494
F +P D+ S+LY++QYPLRP WRPYELDERC EVR KP +S++E+DLS+DVD NN+D+
Sbjct: 120 FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSE 179
Query: 1493 VPEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLK-GGLKKK 1320
+L + KQTL T+ PP AT YAIG+L NKLHLNPIH VVQLR SM LK GG K+K
Sbjct: 180 KASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRK 239
Query: 1319 IDVAEE-----------KTTGPSKKQGKAVKTSAEQNTDVESWLSLEYHGPDSSLARRYR 1173
+VA E K+ G SKKQ K + + +++ + E W+ L+YHG S + RY
Sbjct: 240 NNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSDFSARYL 299
Query: 1172 EKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVP 993
++M+ +S IHF+MNP+DY++SLCP + R K LL E
Sbjct: 300 QRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLCEGE 359
Query: 992 QVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL-KLKGMDAAIRDYVLLLF 816
V +F++L +FAP+D+ D + +L + LVQGLW P+S LL M RDYVLL F
Sbjct: 360 PVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDKMKCLARDYVLLSF 419
Query: 815 SKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQE 636
SKN V+ + L S + + LN FA+ RP DWKF+ D F+K +P+IV+ QE
Sbjct: 420 SKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHPNIVIKQE 479
Query: 635 QGWTYRERRIMEAVGGELSAKQGSKRGVNGKTSL-------------------GTAAIAD 513
Q W E++I + + +L + R GK+++ G +++
Sbjct: 480 QVWAAAEKQITDVI-NKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTGNKNLSN 538
Query: 512 ETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAF--- 342
E+REAL KA+ ++F HKVCSL LI Q LRD A+++S K +
Sbjct: 539 ESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSSFVD 598
Query: 341 PQELQSIVNQIAINIHGVYVAKSSEN--QNPLRDVVINLFRGKEPNTKLRKADIIEAAKF 168
QE +++Q+A NIHG YV+KSSE+ PLR VV +L P+ KL+KAD++EAA+
Sbjct: 599 TQEFAEVISQVATNIHGFYVSKSSEDPQHGPLRKVVTDLLLAGGPDAKLKKADVVEAARH 658
Query: 167 SFHKDYSDTPEYSQVLNELCVSERNAWVLK 78
++ S+ EYS+V++++C S+ +AW+LK
Sbjct: 659 VLKREISNA-EYSKVMSDICESKGSAWILK 687
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 403 bits (1035), Expect = e-109
Identities = 234/547 (42%), Positives = 319/547 (58%), Gaps = 31/547 (5%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDNNYDTSV 1491
F +P DS +QLY++QYPLRP WRPYELDERC EVR KP+S+++EVDL++D +N+D +
Sbjct: 124 FFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTIDDSSNWDPAQ 183
Query: 1490 PEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKID 1314
K KQTL TS PP T YA+G+L NKLHLNPIH VVQLRPS+EH+ K+ +
Sbjct: 184 ASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKN 243
Query: 1313 VAEEKTTGPSKK-----QGKAVKTSAEQNTDVESWLSLEYHGPDSSLARRYREKMVSIND 1149
A T P K +GK + +S +Q W+SL+YHG S + RY EKM++
Sbjct: 244 SA---TLNPEVKLEDSNEGKPIGSSKKQ-----CWISLKYHGSKSDFSSRYLEKMIAQES 295
Query: 1148 SQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQVYQFNSL 969
S + F+M P+DY++SLCPV + + + R+K L+ E P V +F+ L
Sbjct: 296 SPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSVL 355
Query: 968 KYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL-KLKGMDAAIRDYVLLLFSKNIVISS 792
K+FAPDDS D L +LQ + LVQGLW PKS+LL IRDYVLLLFSKN+VI+S
Sbjct: 356 KHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSKNLVINS 415
Query: 791 KQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQGWTYRER 612
Q+ + E LN FA+ RP DWKFK DT F+K YP IV QE+ W E+
Sbjct: 416 SQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEK 475
Query: 611 RIMEAVG---------------------GELSAKQGSKRGVNGKTSLGTAAIADETREAL 495
R+ + L +++ + +G L I ETREAL
Sbjct: 476 RLSKVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETREAL 535
Query: 494 SKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQELQSIVN 315
KA+ ++F +HKVCS QLI Q LRD A+++S K A P+ELQ I++
Sbjct: 536 LKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRIAVAAASGADAPPEELQEIIS 595
Query: 314 QIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHKDYSD 144
Q+A NIHG YV KSS + LR V+I+L + PN KL+KA++ EAA+ +F +D ++
Sbjct: 596 QVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKRDVTN 655
Query: 143 TPEYSQV 123
EY+++
Sbjct: 656 I-EYNKL 661
>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao] gi|508699254|gb|EOX91150.1|
Transcription regulators,zinc ion binding, putative
isoform 3 [Theobroma cacao]
Length = 736
Score = 392 bits (1008), Expect = e-106
Identities = 251/613 (40%), Positives = 342/613 (55%), Gaps = 76/613 (12%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 1494
F +P D+ +QLY+LQYPLRP WRPYELDERC EVR KP S ++E+DL++DVD NNYD+
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 187
Query: 1493 VPEKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
+L++TKQTL+SS PP T YA+G+L +KLHLNPIH VVQLRPSM HLK + K+
Sbjct: 188 RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 247
Query: 1316 DVA--------------EEKTTGPSKKQGKAVKTSAEQNT-DVESWLSLEYHGPDSSLAR 1182
+ A + K G S KQ K +++S EQ D E W+ L+YH + +
Sbjct: 248 NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 307
Query: 1181 RYREKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLS 1002
+Y ++M++ +I F+M+P+DY++SLCP A N+ R+K LLS
Sbjct: 308 QYLQRMMAEESCRIQFTMSPYDYVDSLCP-GASNNNKAQGPSRRLLLSIPLEERLKKLLS 366
Query: 1001 EVPQVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALLKLKG-MDAAIRDYVL 825
E P ++F++LK+FAPD S D +LQ HA LVQGLWVPKS+LL + + RDYVL
Sbjct: 367 EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 426
Query: 824 LLFSKNIVISSKQLEG-SGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIV 648
LLFSKN +IS Q+ S R E L AI RP DWK K D F K YP IV
Sbjct: 427 LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486
Query: 647 MNQEQGWTYRERRIME-----AVGGELSAKQGS----KRGVNGKTSLGTAA--------I 519
NQEQ W E ++ A GG K G+ ++ +N + A +
Sbjct: 487 KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTM 546
Query: 518 ADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFP 339
+DETREA+ KA+ ++F HKVCSLQLI + LRD AL++S K A
Sbjct: 547 SDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGADAPE 606
Query: 338 QELQSIVNQIAINIH-GVYVAKSSEN------------------------------QN-- 258
ELQ +V+++A+ +H G++V +SS QN
Sbjct: 607 HELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFLQNPS 666
Query: 257 -------PLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHKDYSDTPEYSQVLNELCVSE 99
P R+VVINL R K KL+KAD+ AA S ++ S+ EY++V+++ C +
Sbjct: 667 FSSELFFPCREVVINLLRVK---GKLKKADVSAAALLSLKREISNN-EYNKVMSDFCEYK 722
Query: 98 RNAWVLKNGDGKP 60
+ WVLK+GDGKP
Sbjct: 723 SSWWVLKSGDGKP 735
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 387 bits (993), Expect = e-104
Identities = 241/573 (42%), Positives = 322/573 (56%), Gaps = 35/573 (6%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 1494
+L+P D ++LY+LQYPLRP WRPYELD+RC EVR K KS+++EVDL++DVD+ NYD+
Sbjct: 114 YLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSD 173
Query: 1493 VPEKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
++ +TKQTLTSS KPP+ YA+G+L NKLHLNPIH VVQLRPSM+H K K+
Sbjct: 174 ADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRR 233
Query: 1316 DVA----------EEKTTGPSKKQGKAVKTSAEQNTDV-ESWLSLEYHGPDSSLARRYRE 1170
A EE TTG KKQGK EQN D E W+ L YHG S ++ Y
Sbjct: 234 TTASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVR 293
Query: 1169 KMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQ 990
KMV + S I FSMN DY+N+LCP + + N R +T L + P
Sbjct: 294 KMVEHDSSHIQFSMN-HDYVNTLCPGTSNENNG-SNGPSRVLLSLPLEERFRTWLLQGPP 351
Query: 989 VYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL--KLKGMDAAIRDYVLLLF 816
+++F++LK+ APD S D LA+L HA LVQGLW+PKS+LL K +G+DA RDYVLLLF
Sbjct: 352 IHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLF 411
Query: 815 SKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQE 636
S+ +I++ QL + VL++ A R NDWKFK D F+K P IV QE
Sbjct: 412 SRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQE 471
Query: 635 QGWTYRERRIMEAVGGE------------------LSAKQGSKRGVNG-KTSLGTAAIAD 513
Q W E+ I E + G+ ++K SK N + +++
Sbjct: 472 QTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSE 531
Query: 512 ETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQE 333
ETREAL KA+ ++F +HKVC Q I Q LR+ A+++S+ K A P+E
Sbjct: 532 ETREALPKALQKLFQSHKVC-FQQICQRLREMAVSESSRPKGFAREAIAAAHGVEAPPEE 590
Query: 332 LQSIVNQIAINIHGVYVAKSSENQNPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHKD 153
LQ+I++Q+AINIHGVYV KSS P+
Sbjct: 591 LQAIISQVAINIHGVYVLKSS----PVH-------------------------------- 614
Query: 152 YSDTPEYSQ-VLNELCVSERNAWVLKNGDGKPQ 57
PE+ + V+ ELCVS+ +AWVLK+GDG P+
Sbjct: 615 ----PEHDEFVVQELCVSQGSAWVLKSGDGNPK 643
>ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
gi|462397466|gb|EMJ03134.1| hypothetical protein
PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 386 bits (992), Expect = e-104
Identities = 240/589 (40%), Positives = 334/589 (56%), Gaps = 52/589 (8%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 1494
F +P D SQLY+LQYPLRP WRPYEL+ RC EVR KP +S++E+DLSL++D NYD
Sbjct: 117 FFNPHIDDNSQLYVLQYPLRPWWRPYELENRCEEVRLKPATSEMEIDLSLNLDPKNYDED 176
Query: 1493 VPEKLRITKQTL-TSSKP--PLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGG--- 1332
+L++TKQTL T+ KP T YA+G+L +KLHLNPI VVQLRPS+EHLK G
Sbjct: 177 CGNRLKMTKQTLYTTWKPTRTTGTGYAVGVLMGDKLHLNPIDKVVQLRPSLEHLKSGSSR 236
Query: 1331 ----------LKKKIDVAEEKT-TGPSKKQGKAVKTSAEQNT-DVESWLSLEYHGPDSSL 1188
+K K++ + ++T +GPSKKQ K +++S E+ T D ESW+ L+YH +S
Sbjct: 237 RKNSVTGDAEVKVKLEESRQETSSGPSKKQTKRMESSTEKKTEDEESWVPLQYHSSESDF 296
Query: 1187 ARRYREKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTL 1008
+ +Y +MV S I F+M+P+DY+NSLCP +R RIK L
Sbjct: 297 SAKYLRRMVGQESSPIQFTMSPYDYVNSLCPRTCKGSSR------RFLLSLPLEERIKKL 350
Query: 1007 LSEVPQVYQFNSL-KYFAPDDSDNDFLAILQHHADLV--QGLWVPKSALL----KLKGMD 849
L E P +F+ L KYFAPD + + L +LQ HA L+ GLWVPK+ LL +K D
Sbjct: 351 LVEEPLARRFSDLKKYFAPDHTGEELLDVLQKHAQLLLDSGLWVPKTLLLYPSKDMKDRD 410
Query: 848 ----AAIRDYVLLLFSKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKD 681
R+YVL LF KN VIS+ QL L A+ RP DWK K D
Sbjct: 411 HVARQTARNYVLNLFRKNTVISNSQLNLPQNHKNHAYESLKILAVSRPSSQDWKLKEQSD 470
Query: 680 TLFLKNYPHIVMNQEQGWTYRERRIMEAV-----------------GGELSAKQGSKRGV 552
F + YP I +QEQ W E +++ A G L++ +G+ +
Sbjct: 471 KSFKELYPDIFKSQEQNWERMEEKLVNAFKAHTDRGVKNACMTSKPGKSLNSDKGTTKSA 530
Query: 551 NGKTSLGTAAIADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSK-XXXXX 375
+ +G ++DETR AL +A+ E+ HKVC+ +LI + LR A+ KS+ K
Sbjct: 531 S-DVQIGGRTMSDETRAALPEAIKEVLHEHKVCNFRLICEGLRRLAVRKSSLPKVDPKTK 589
Query: 374 XXXXXXXXXAFPQ-ELQSIVNQIAINIHGVYVAKSS---ENQNPLRDVVINLFRGKEPNT 207
PQ ELQ ++ Q+A +IHG+YV KSS + LR VVI+L K PN
Sbjct: 590 RVIDAAYGVDAPQHELQKVICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKGPNA 649
Query: 206 KLRKADIIEAAKFSFHKDYSDTPEYSQVLNELCVSERNAWVLKNGDGKP 60
KL++ ++ EAAK + +D +T EY++V+N+ CV + +AW+LK+GDG P
Sbjct: 650 KLKRGEVFEAAKIALERDI-NTNEYNKVMNDFCVFKGSAWILKSGDGGP 697
>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao] gi|508699253|gb|EOX91149.1|
Transcription regulators,zinc ion binding, putative
isoform 2 [Theobroma cacao]
Length = 588
Score = 385 bits (990), Expect = e-104
Identities = 240/563 (42%), Positives = 329/563 (58%), Gaps = 40/563 (7%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVD-NNYDTS 1494
F +P D+ +QLY+LQYPLRP WRPYELDERC EVR KP S ++E+DL++DVD NNYD+
Sbjct: 31 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 90
Query: 1493 VPEKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
+L++TKQTL+SS PP T YA+G+L +KLHLNPIH VVQLRPSM HLK + K+
Sbjct: 91 RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 150
Query: 1316 DVA--------------EEKTTGPSKKQGKAVKTSAEQNT-DVESWLSLEYHGPDSSLAR 1182
+ A + K G S KQ K +++S EQ D E W+ L+YH + +
Sbjct: 151 NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 210
Query: 1181 RYREKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLS 1002
+Y ++M++ +I F+M+P+DY++SLCP A N+ R+K LLS
Sbjct: 211 QYLQRMMAEESCRIQFTMSPYDYVDSLCP-GASNNNKAQGPSRRLLLSIPLEERLKKLLS 269
Query: 1001 EVPQVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALLKLKG-MDAAIRDYVL 825
E P ++F++LK+FAPD S D +LQ HA LVQGLWVPKS+LL + + RDYVL
Sbjct: 270 EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVL 329
Query: 824 LLFSKNIVISSKQLEG-SGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIV 648
LLFSKN +IS Q+ S R E L AI RP DWK K D F K YP IV
Sbjct: 330 LLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 389
Query: 647 MNQEQGWTYRERRIME-----AVGGELSAKQGS----KRGVNGKTSLGTAA--------I 519
NQEQ W E ++ A GG K G+ ++ +N + A +
Sbjct: 390 KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTM 449
Query: 518 ADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFP 339
+DETREA+ KA+ ++F HKVCSLQLI + LRD AL++S K A
Sbjct: 450 SDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGADAPE 509
Query: 338 QELQSIVNQIAINIH-GVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEAAK 171
ELQ +V+++A+ +H G++V +SS +PLR+VVINL R K KL+KAD+ AA
Sbjct: 510 HELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---GKLKKADVSAAAL 566
Query: 170 FSFHKDYSDTPEYSQVLNELCVS 102
S ++ S+ EY++ L + ++
Sbjct: 567 LSLKREISNN-EYNKALRNMDIA 588
>ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum]
gi|557091693|gb|ESQ32340.1| hypothetical protein
EUTSA_v10003751mg [Eutrema salsugineum]
Length = 682
Score = 381 bits (978), Expect = e-103
Identities = 217/562 (38%), Positives = 319/562 (56%), Gaps = 31/562 (5%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 1494
F +P D+ ++LY+LQYPLRP WRPYE+DERC VR P +SQ+E+DLS+DV + NYD+
Sbjct: 121 FFNPSIDANTKLYVLQYPLRPSWRPYEMDERCEAVRVNPSTSQVEIDLSMDVHSRNYDSK 180
Query: 1493 VPEKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
+L +TKQTLT++ K P YA+G+L +KLHLNP+H V QLRPSME+L KKK
Sbjct: 181 FGSELHMTKQTLTTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMEYLSS--KKKH 238
Query: 1316 DVAEEKTTGPSKKQGKAVKTSAEQNT-DVESWLSLEYHGPDSSLARRYREKMVSINDSQI 1140
A ++ G SK+Q K V+ S +Q E+W++L+YHG S RY M++ +S I
Sbjct: 239 AEATGESVGTSKRQNKGVQASTDQKPIPEENWVALKYHGLQSEFCSRYLNGMMANGNSSI 298
Query: 1139 HFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQVYQFNSLKYF 960
F+M+P YINSLC + + + R++ LL + P +++++ LK++
Sbjct: 299 DFNMSPDVYINSLCRGESSRNSESRDSSKRVLTSLPLEERVQKLLCQGPPLFRYSVLKHY 358
Query: 959 APDDSDNDFLAILQHHADLVQGLWVPKSALLKLKGMDAAIRDYVLLLFSKNIVISSKQLE 780
AP+ SDNDFL +LQ +A LVQGLW PK+ LL+L G A RDYVL+LFSK I+ ++
Sbjct: 359 APEFSDNDFLKVLQDYAWLVQGLWTPKTRLLQLDGPQEASRDYVLMLFSKGSTITYSEVA 418
Query: 779 GSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQGWTYRERRIME 600
+GR E +L FA RP DWKFK D F+K+Y I QE W + ++
Sbjct: 419 ATGRLKEKITSMLTKFAKERPLLCDWKFKEPADVSFIKSYKEIANKQEIFWKALDEKLTP 478
Query: 599 AVGGELSAKQGSKRGVNGKTSLGTA-------------------------AIADETREAL 495
+ ++ + R GK GT ++++ R A+
Sbjct: 479 KITQGGKSRADNLRNGVGKNPSGTVKPEIPTTLSDKGGSSRNAIHRFVGQKMSEDIRRAI 538
Query: 494 SKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQELQSIVN 315
KA+ ++F +HKVCS + I Q LRD A++ SNN K A +ELQ I++
Sbjct: 539 LKALKKVFQSHKVCSYETICQRLRDLAVSTSNNPKADSGMAQQVALAVDAHKEELQQIIS 598
Query: 314 QIAINIHGVYVAKSSEN---QNPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHKDYSD 144
++ ++IHG +V K S + +PLR VVI+L G P KL +AD+ A + + +
Sbjct: 599 EVTVDIHGSFVYKLSPDHPEHDPLRSVVIDLLLGNSPGAKLMRADVFVAGETVLRRKITS 658
Query: 143 TPEYSQVLNELCVSERNAWVLK 78
EY +V+++LC S + WVL+
Sbjct: 659 N-EYQKVMHDLCESSSSGWVLQ 679
>ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|10177619|dbj|BAB10766.1|
unnamed protein product [Arabidopsis thaliana]
gi|332008443|gb|AED95826.1| SIN-like protein [Arabidopsis
thaliana]
Length = 689
Score = 377 bits (969), Expect = e-102
Identities = 220/565 (38%), Positives = 322/565 (56%), Gaps = 34/565 (6%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDTS 1494
F P D+ +QLY+LQYPLRP WRPYE+DERC EVR P +SQ+E+DLS+DV NYD++
Sbjct: 125 FFKPSIDANTQLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVEIDLSMDVHSKNYDSN 184
Query: 1493 VPEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
L +TKQTL T+ K P YA+G+L +KLHLNP+H V QLRPSM+ L KKK
Sbjct: 185 F--GLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMQSLSSDKKKKQ 242
Query: 1316 DVAEEKTTGPSKKQGKAVKTSAEQNTDV--ESWLSLEYHGPDSSLARRYREKMVSINDSQ 1143
+ + E++ G SKKQ K V+ ++ + E+W+SL+YHG S RY M++ +S
Sbjct: 243 EESTEESVGTSKKQNKGVQQASTDQKPINEETWVSLKYHGLQSEYCSRYLNGMMANGNSS 302
Query: 1142 IHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQVYQFNSLKY 963
I F+M+P YIN LC + + + R++ LL E + +++ LK+
Sbjct: 303 IDFNMSPGTYINELCRGGSSRNSESKETLKRVLLSLPLKERVQKLLCEGSPLIRYSVLKH 362
Query: 962 FAPDDSDNDFLAILQHHADLVQGLWVPKSALLKLKGMDAAIRDYVLLLFSKNIVISSKQL 783
+AP+ SD DFL LQ + LVQGLW PK+ LLKL G A RDYVL LFS+N I ++
Sbjct: 363 YAPEFSDEDFLGALQEYGRLVQGLWTPKTRLLKLDGPVEAARDYVLSLFSQNTTIKYSEV 422
Query: 782 EGSGRRIE-VPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQGWTYRERRI 606
E +G +++ + +L FA R DWKFK D F+K+YP IV Q+ WT + +
Sbjct: 423 EATGDKMKPLMERMLTEFAKERHVLKDWKFKEPTDVSFIKSYPEIVKEQDIFWTDKRENL 482
Query: 605 ---MEAVGGELSAKQG--------------------SKRGVNGKTSLG---TAAIADETR 504
+ A GG+ A + S +G + K ++ T + +E +
Sbjct: 483 KSRITAQGGKSRADKRRNVVGTSSSVTVKPEVPTTLSDKGGSSKNTIHRVVTQEMPEELK 542
Query: 503 EALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQELQS 324
+AL KA+ ++F HKVC + I Q LRD A++ SNN K A+ EL+
Sbjct: 543 KALPKALKKVFQTHKVCRYETICQGLRDLAVSTSNNPKADSGMAVNVALAVDAYQGELED 602
Query: 323 IVNQIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHKD 153
++N +A NIHG YV+ SS + + LR+VVI+L G P TKL KA++ A + ++
Sbjct: 603 VINGVATNIHGSYVSISSPDHPEYDSLREVVISLLTGSPPGTKLMKAEVFAAGRTKLERE 662
Query: 152 YSDTPEYSQVLNELCVSERNAWVLK 78
++ EY +V++E+C + + WVL+
Sbjct: 663 ITNN-EYIKVMHEICETNSSGWVLQ 686
>ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arabidopsis lyrata subsp.
lyrata] gi|297309830|gb|EFH40254.1| hypothetical protein
ARALYDRAFT_495012 [Arabidopsis lyrata subsp. lyrata]
Length = 676
Score = 375 bits (962), Expect = e-101
Identities = 219/565 (38%), Positives = 324/565 (57%), Gaps = 34/565 (6%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDTS 1494
F +P D+ ++LY+LQYPLRP WRPYE+DERC EVR +SQ+E+DLS+DV NYD++
Sbjct: 113 FFNPSFDANTKLYVLQYPLRPSWRPYEMDERCEEVRVNTSTSQVEIDLSMDVHSKNYDSN 172
Query: 1493 VPEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
L +TKQTL T+ K P YA+G+L +KLHLNP+H V QLRPSM++L KKK
Sbjct: 173 F--GLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMQYLSSNGKKKQ 230
Query: 1316 DVAEEKTTGPSKKQGKAVKTSAEQN-TDVESWLSLEYHGPDSSLARRYREKMVSINDSQI 1140
+ + E++ G SKKQ K V+ S +Q + E+W++L+YHG S Y M++ +S +
Sbjct: 231 EESTEESVGTSKKQNKGVQASTDQKPINEETWVALKYHGLQSEYCSTYLNGMMANGNSSL 290
Query: 1139 HFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQVYQFNSLKYF 960
F+M+P YIN LC + + + + R+K LL E + ++N LK++
Sbjct: 291 DFNMSPDVYINELCRGGSSRNSELKETSKRVLLSLPLEERVKKLLCEGSPLLRYNVLKHY 350
Query: 959 APDDSDNDFLAILQHHADLVQGLWVPKSALLKLKGMDAAIRDYVLLLFSKNIVISSKQLE 780
AP+ SD DFL LQ LVQGLW PK+ LL L +IR+YVL LFS+N I ++E
Sbjct: 351 APEFSDEDFLGALQEDGWLVQGLWTPKTKLLGLDENCRSIREYVLSLFSQNTTIKYSEVE 410
Query: 779 GSG---RRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVMNQEQGWTYRERR 609
+G ++ + +L FA RP NDWKFK D F+K+YP IV Q+ WT R ++
Sbjct: 411 ATGFQREKMIIMKSMLTEFAKERPLLNDWKFKEPTDVSFIKSYPEIVKEQDILWTNR-KK 469
Query: 608 IMEAVGGELSAKQGSKRGVNGKTSLGTA-------------------------AIADETR 504
I+E++ ++ ++R V GK S T + +E R
Sbjct: 470 IIESILTTRKSRADNRRNVVGKNSSVTVKPEVPTTLSDKGGSSRNTIPRVVGQKMPEELR 529
Query: 503 EALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQELQS 324
AL KA+ ++F HKVC + I Q LRD A++ SNN K A+ EL+
Sbjct: 530 WALPKALKKVFQTHKVCRYETICQGLRDLAVSTSNNPKADSGMAVNVALAVDAYQDELKD 589
Query: 323 IVNQIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHKD 153
+++++A NIHG YV+ SS + + LR VVI+LF G P KL KA++ A + +++
Sbjct: 590 VISEVAANIHGSYVSISSPDHPEYDSLRGVVISLFCGTGPGAKLMKAEVFAAGRNELNRE 649
Query: 152 YSDTPEYSQVLNELCVSERNAWVLK 78
++ EY +V+++LC + + WVL+
Sbjct: 650 ITNN-EYIKVMHDLCETNSSGWVLQ 673
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 374 bits (960), Expect = e-100
Identities = 243/560 (43%), Positives = 311/560 (55%), Gaps = 42/560 (7%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 1494
F +P D +QLY+LQYPLRP WRPYELDERC EVR KP SS++E+DLSLDVD+ NYD
Sbjct: 117 FFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176
Query: 1493 VPEKLRITKQTLTSS-KPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHL-KGGLKKK 1320
++L +TKQTL S P AT YA+G+L NKLHLN IH V+QLRPS++HL G KKK
Sbjct: 177 CGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGSKKK 236
Query: 1319 IDV-------------AEEKTTGPSKKQGKAVKTSAEQN-TDVESWLSLEYHGPDSSLAR 1182
+V + +K G SKKQ K +S +Q D E W+ L+YHG +S +
Sbjct: 237 NNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESESSV 296
Query: 1181 RYREKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLS 1002
RY KM S + F+M+P+DY+NSLCP GN RIK+LL
Sbjct: 297 RYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKSLLC 356
Query: 1001 E-VPQVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL----KLKGMDAAIR 837
E + V++F+ LK+FAPD + + L LQ+HA LVQGLW PKS+LL K G R
Sbjct: 357 EGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQRIAR 416
Query: 836 DYVLLLFSKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYP 657
DYVLLLF KN V S L LN + RP DWKFK D F+KNYP
Sbjct: 417 DYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIKNYP 476
Query: 656 HIVMNQEQGWTYRERRIMEAVGGELSAK--------------QGSKRGVNGKTS--LGTA 525
+V QE+ W ER IM G S + S +GV TS +G
Sbjct: 477 DVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNSNKGVPKGTSEVVGGK 536
Query: 524 AIADETREAL-SKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXX 348
I D+ RE L SK + ++ HKVCSLQL+ Q LR+ AL K N K
Sbjct: 537 KIPDDIREVLCSKILPKVIQEHKVCSLQLMCQGLRELALNKLNLPKADDRFARAAACGTA 596
Query: 347 AFPQELQSIVNQIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEA 177
+ P EL ++++ AINIHG+YV KSS +P R+VVI+L R KL+KA+I +A
Sbjct: 597 S-PGELVKLLDETAINIHGLYVLKSSAEHPQYDPFRNVVIDLLRQNGLAAKLKKAEIFDA 655
Query: 176 AKFSFHKDYSDTPEYSQVLN 117
AK + +D + EYS+ N
Sbjct: 656 AKNALKRDVTSN-EYSKPNN 674
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 372 bits (955), Expect = e-100
Identities = 226/573 (39%), Positives = 341/573 (59%), Gaps = 35/573 (6%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTS 1494
+ SP D+ ++LY++QYPLRP WRPY+LDE+C EVR KP +S++EVDLS+D+++ N + +
Sbjct: 115 YFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSIDLESYNVEKA 174
Query: 1493 VPEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLKGGLKKKI 1317
+KL+ TKQTL T+ KPP A A+G+L +KLHL+PIH VVQLRPS +L G +K
Sbjct: 175 TADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRHYLDSGGSEKK 234
Query: 1316 DVA----EEKTTGPSKKQGKAVKTSAEQNTDV-ESWLSLEYHGPDSSLARRYREKMVSIN 1152
+VA + K T PS +Q S EQ +D + W+ LEYHG S ++ RY ++MV+
Sbjct: 235 NVATSNNQNKQTTPSMEQKSDGAPSIEQKSDSNQCWVPLEYHGCKSDISSRYFQQMVTHE 294
Query: 1151 DSQIHFSMNPFDYINSLCPVPALQGNRMG-XXXXXXXXXXXXXXRIKTLLSEVPQVYQFN 975
S I+F M+ +DYI +LC P + N + R++TLL E P +++F+
Sbjct: 295 SSPINFEMSTYDYIATLC--PGVSSNTLAKGPSKRYLLSLPVEKRLQTLLIEGPPLHRFS 352
Query: 974 SLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL-KLKGMDAAIRDYVLLLFSKNIVI 798
++K+FAP+ SD++ L++L+ A L++G WVP+S+LL G+++ R+Y+L+ F K++ +
Sbjct: 353 AIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPTGGIESLARNYILVRFHKSLTV 412
Query: 797 SSKQLE--GSGRRIEVPVHVLNSFAI----FRPCCNDWKFKMAKDTLFLKNYPHIVMNQE 636
S +L G G H + FA+ + N WKFK D F+K +P +V QE
Sbjct: 413 KSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYWKFKELPDESFIKEFPIVVKKQE 472
Query: 635 QGWTYRERR---IMEAVGGELSAKQG-SKRGVNG-----------KTSLG-----TAAIA 516
+ + E I+ +GG+ K + GVN TSLG + ++
Sbjct: 473 EIFKILENEVNSIIGTLGGKRKLKSAITNSGVNNALFTSTNSDPRATSLGEDPPRSMTMS 532
Query: 515 DETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQ 336
ETR AL A+ ++F HKVCS QLI Q LR ALA++ K
Sbjct: 533 SETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQTMLPKGGSKMSVDAANSLDVPQD 592
Query: 335 ELQSIVNQIAINIHGVYVAKSSENQNPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHK 156
EL++I+ ++A +IHG YV KS++N +P RDVVI++ RG PN KL+KA+I+EAA+ +
Sbjct: 593 ELKAILGEVACDIHGCYVLKSAQN-DPFRDVVIDMLRGSGPNGKLKKAEILEAARRKLGR 651
Query: 155 DYSDTPEYSQVLNELCVSERNAWVLKNGDGKPQ 57
D + EY + ++ELCVS+ + WVLK+GDG Q
Sbjct: 652 DVPNN-EYIKAVSELCVSKGSFWVLKSGDGSKQ 683
>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Fragaria vesca subsp. vesca]
Length = 685
Score = 369 bits (948), Expect = 2e-99
Identities = 228/581 (39%), Positives = 332/581 (57%), Gaps = 43/581 (7%)
Frame = -3
Query: 1670 FLSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDV-DNNYDTS 1494
F +P DS +QLY+LQYPLRPRWRPYEL++RC E+R KP ++++EVDLS+D+ N D
Sbjct: 116 FFNPNVDSNTQLYVLQYPLRPRWRPYELEDRCEEIRVKPGTAEVEVDLSIDLYSKNCDQE 175
Query: 1493 VPEKLRITKQTL-TSSKPPLATSYAIGILKENKLHLNPIHVVVQLRPSMEHLK-GGLKKK 1320
+L++TKQTL T P +T YA+G+L NKLHLNP+H VVQLRPS++HLK GG K+K
Sbjct: 176 FANRLKMTKQTLATEWDPCRSTGYAVGVLMGNKLHLNPVHAVVQLRPSLDHLKPGGSKRK 235
Query: 1319 ------IDVA---EEKTTGPSKKQGKAVKTSAEQNTDVESWLSLEYHGPDSSLARRYREK 1167
+VA EEK+ PSKKQ K V++S E D ESW+ L+YHG +S + Y ++
Sbjct: 236 GTATGDAEVAVKREEKSLAPSKKQNKRVESSTE---DEESWVPLQYHGSESDFSAGYLKR 292
Query: 1166 MVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSEVPQV 987
MV + S + F+M P+DY+NSLCP ++ RI+ LL E P
Sbjct: 293 MVVQDSSPLEFTMTPYDYVNSLCPRTCKGSSKRA------LLNLPLEERIQKLLVEEPIA 346
Query: 986 YQFNSL-KYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL--KLKGMD--------AAI 840
+F+ L KY+AP + + + L +LQ + L++GLWVPK+ALL K +G
Sbjct: 347 RRFSDLKKYYAPRNQEKELLDVLQKNGLLLRGLWVPKTALLYPKKEGSSRKKDDDNLRTA 406
Query: 839 RDYVLLLFSKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNY 660
R+++L F KN VIS +L L A++RP DWK K D F + +
Sbjct: 407 RNHILNSFQKNPVISYSELNVYPPLKPHFDETLKFLAVYRPSTRDWKLKEQSDVSFAELH 466
Query: 659 PHIVMNQEQGWTYRERRIMEAV-------GGELSAK--------QGSKRGVNGKTSLGTA 525
P I +QEQ W +++++EA+ +S+K +G + +G S G
Sbjct: 467 PDISESQEQIWERMDKQLVEALKPHRDLKNASMSSKTGKLPNSDKGPNKSASGAPSGGVR 526
Query: 524 AIADETREALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXA 345
++DET L +A+ E+F KVCS QLI +L + L +S ++K
Sbjct: 527 TMSDETLAVLPQAIKEVFKTRKVCSFQLICDTLGNMTLERSQHAKVDPNSRKLTAVRNGL 586
Query: 344 F--PQELQSIVNQIAINIHGVYVAKSSE---NQNPLRDVVINLFRGKEPNTKLRKADIIE 180
P+EL++++ Q A+ I GVYV KSS + LRDVVI L +GK ++K D+
Sbjct: 587 AAPPEELKNVITQFAVEIGGVYVLKSSSEHPEHDQLRDVVIKLLQGKNKG-PIKKLDVTV 645
Query: 179 AAKFSFHKDYSDTPEYSQVLNELCVSERNAWVLKNGDGKPQ 57
AA+ ++ S+ EY++V+NELCVS+ + W LK+GDG P+
Sbjct: 646 AAQEELGREISNN-EYNKVMNELCVSKGSQWYLKSGDGSPK 685
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 367 bits (942), Expect = 1e-98
Identities = 220/573 (38%), Positives = 326/573 (56%), Gaps = 36/573 (6%)
Frame = -3
Query: 1667 LSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTSV 1491
++P D +QLY+ QYPLR WRPYEL+ERC+EVR +P ++++EVDL++D+D+ N+D
Sbjct: 102 INPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDS 161
Query: 1490 PEKLRITKQTLTSSKPPL---ATSYAIGILKENKLHLNPIHVVVQLRPSMEHLK-GGLKK 1323
I KQ L++S PL A+ YA+G+L +KLHLNP+H VVQLRPS +LK LKK
Sbjct: 162 VHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKK 221
Query: 1322 KI------------DVAEEKTTGPSKKQGKAVKTSAEQNTDVESWLSLEYHGPDSSLARR 1179
+ DV E++ GPSKKQ K + E WL L+YHG S ++ R
Sbjct: 222 NVTTNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIG---EHWLHLKYHGARSDISAR 278
Query: 1178 YREKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSE 999
Y +KM S + FSM+P DY+N+ P +R+ R++T L E
Sbjct: 279 YLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRL-KILRTRLSQLPLEERVRTWLLE 337
Query: 998 VPQVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL--KLKGMDAAIRDYVL 825
P +++F++LK+ APD+S ++ + +LQ +A LVQGLWVPKS+L+ G++ R++VL
Sbjct: 338 GPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVL 397
Query: 824 LLFSKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVM 645
F+K I+I ++ L S A+ RP NDWK K D F Y +V
Sbjct: 398 YEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVR 457
Query: 644 NQEQGWTYRERRIMEAV-GGELSAKQGSKRGVNG------------KTSLGTAAIADETR 504
++ W ++I + + GG + N +SL ++++E R
Sbjct: 458 EKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIR 517
Query: 503 EALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQ-ELQ 327
EAL KA+ E+F +KVCS Q I Q LR ++KS K PQ E+Q
Sbjct: 518 EALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEEIQ 577
Query: 326 SIVNQIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFHK 156
+++NQ+A+NIHGVYV KSS + + LR VVI+LF + P+ KL+KA + EAAK ++
Sbjct: 578 AVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLNR 637
Query: 155 DYSDTPEYSQVLNELCVSERNAWVLKNGDGKPQ 57
D ++ E+ +V+ ELC SE++AWVL++GDGKP+
Sbjct: 638 DITNV-EFLKVMKELCHSEKSAWVLRSGDGKPE 669
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 367 bits (941), Expect = 2e-98
Identities = 218/574 (37%), Positives = 326/574 (56%), Gaps = 37/574 (6%)
Frame = -3
Query: 1667 LSPPTDSKSQLYILQYPLRPRWRPYELDERCREVRFKPKSSQLEVDLSLDVDN-NYDTSV 1491
++P D +QLY+ QYPL+ WRPYEL+ERC+EVR +P ++++EVDL++D+D+ N+D
Sbjct: 102 INPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDS 161
Query: 1490 PEKLRITKQTLTSSKPPLAT---SYAIGILKENKLHLNPIHVVVQLRPSMEHLK-GGLKK 1323
+ KQ L++S PL T YA+G+L +KLHLNP+H VVQLRPS +LK LKK
Sbjct: 162 VHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKK 221
Query: 1322 KI------------DVAEEKTTGPSKKQGKAVKTSAEQNTDVESWLSLEYHGPDSSLARR 1179
I DV E++ GPSKKQ K+ + E WL L+YHG S ++ R
Sbjct: 222 NIITNNDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIG---EHWLHLKYHGARSDISAR 278
Query: 1178 YREKMVSINDSQIHFSMNPFDYINSLCPVPALQGNRMGXXXXXXXXXXXXXXRIKTLLSE 999
Y +KM S + FSM+P DY+N+ CP +R+ R++ L E
Sbjct: 279 YLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRL-KILRTRLSQLPLEERVRIWLLE 337
Query: 998 VPQVYQFNSLKYFAPDDSDNDFLAILQHHADLVQGLWVPKSALL--KLKGMDAAIRDYVL 825
P +++F++L + APD+S ++ + +LQ +A LVQGLWVPKS+L+ G++ R++VL
Sbjct: 338 GPPIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVL 397
Query: 824 LLFSKNIVISSKQLEGSGRRIEVPVHVLNSFAIFRPCCNDWKFKMAKDTLFLKNYPHIVM 645
F+K I+I ++ L S A+ RP NDWK K D F Y +V
Sbjct: 398 YEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVR 457
Query: 644 NQEQGWTYRERRIMEAVGGELSAKQGSKRGVN--------------GKTSLGTAAIADET 507
Q+ W ++I + + G + K +N +SL ++++E
Sbjct: 458 EQQATWECLGKQINDVLPGG-RTRPTMKNPINRNADITALPSGDKPTSSSLLRTSMSEEI 516
Query: 506 REALSKAVMEIFSNHKVCSLQLINQSLRDRALAKSNNSKXXXXXXXXXXXXXXAFPQ-EL 330
REAL KA+ E+F +KVCS Q I Q LR ++KS K PQ E+
Sbjct: 517 REALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASVDVFDAPQEEI 576
Query: 329 QSIVNQIAINIHGVYVAKSSENQ---NPLRDVVINLFRGKEPNTKLRKADIIEAAKFSFH 159
Q+++NQ+A+NIHGVYV KSS + + LR +VI+LF + P+ KL+KA + EAAK +
Sbjct: 577 QAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLN 636
Query: 158 KDYSDTPEYSQVLNELCVSERNAWVLKNGDGKPQ 57
+D ++ E+ +V+ ELC SE++AWVL++GDGKP+
Sbjct: 637 RDITNV-EFLKVMKELCHSEKSAWVLRSGDGKPE 669