BLASTX nr result
ID: Cocculus23_contig00010714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00010714
(1921 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi... 503 e-139
ref|XP_007200271.1| hypothetical protein PRUPE_ppa014901mg [Prun... 486 e-134
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera] 477 e-132
ref|XP_007019280.1| Tetratricopeptide repeat-like superfamily pr... 474 e-131
ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containi... 473 e-130
ref|XP_002306667.1| pentatricopeptide repeat-containing family p... 469 e-129
ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containi... 457 e-125
ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containi... 446 e-122
ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containi... 444 e-122
ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containi... 443 e-121
ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containi... 434 e-119
ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containi... 424 e-116
sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-c... 397 e-108
ref|NP_175064.2| pentatricopeptide repeat-containing protein [Ar... 397 e-108
ref|XP_002520264.1| pentatricopeptide repeat-containing protein,... 397 e-108
ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Caps... 392 e-106
ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containi... 391 e-106
ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutr... 390 e-106
ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata] ... 387 e-104
ref|XP_006434328.1| hypothetical protein CICLE_v10000854mg [Citr... 371 e-100
>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 503 bits (1294), Expect = e-139
Identities = 250/432 (57%), Positives = 325/432 (75%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
+YSNLI+H +K L+ AK +HAQLIKVG HTFLGNR LD YS+ G +++L+ F ++
Sbjct: 39 YYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDI 98
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
DKN +WN+ L + G +E+AR +FDEM + DVVSWN+MISGY S G A
Sbjct: 99 IDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFS 158
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+M ++PS FTYS L+S VSSA + KQIH +IR+G+ LSNVV+GN LI MYG +V
Sbjct: 159 EMQKAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVV 218
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
DYAFGVF+TM +D+ SWNSLI C KSGY +L L QF MRS GYSPD FT+STVIT+C
Sbjct: 219 DYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVC 278
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
NLQ L KG+Q+F+L + +GFLSNSIVSSA I +FSKC+ L+DS+++FEE+++WDS++ N
Sbjct: 279 SNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCN 338
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
++IS Y+ HGF A+QLF+L L+ENLRPTEFTLS +L++ S +P +QG QIH LV+K
Sbjct: 339 AMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKS 398
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
G E+ IVASSLV+MY+K GLI+SA+K FAK+G RDL+SWNTMIMG A NGR +ALE+F
Sbjct: 399 GLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIF 458
Query: 39 ELLLKTGPWPDK 4
+ LL GP PD+
Sbjct: 459 KELLIGGPPPDE 470
Score = 122 bits (305), Expect = 8e-25
Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 9/402 (2%)
Frame = -2
Query: 1302 FFYSNLIDHSLHVKCLNSAKIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFY 1126
F YS L+ V K IHA +I+ G+ ++ +GN L+ Y +FG VD A
Sbjct: 170 FTYSTLLSF---VSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFG--- 223
Query: 1125 EMPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEV 946
+F M E D+ SWNS+I +G+ AL
Sbjct: 224 ----------------------------VFITMEELDITSWNSLIWSCGKSGYQNLALRQ 255
Query: 945 VQQMLSVDVKPSAFTYSILMSCVSSAL---QAKQIHCCIIRSGLSLSNVVLGNGLINMYG 775
M SV P FT S +++ S+ + +QI IR G LSN ++ + I+++
Sbjct: 256 FVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGF-LSNSIVSSASIDLFS 314
Query: 774 GLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTIST 595
++ + VF + D + N++I G+G+ L F P FT+S
Sbjct: 315 KCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSI 374
Query: 594 VITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWD 415
V++ L + +G Q+ SL V G S+ IV+S+++ M++K ++D ++K F ++ D
Sbjct: 375 VLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARD 434
Query: 414 SLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHP 235
+ N++I G + +G +A+++F +L P E TL+ +L + + ++G+ I
Sbjct: 435 LISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFS 494
Query: 234 LVLKLGFEAYTIVA-----SSLVDMYSKAGLIESALKVFAKM 124
+ K Y ++ + +VDM S+ G ++ A+ + M
Sbjct: 495 SMEK----EYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELM 532
>ref|XP_007200271.1| hypothetical protein PRUPE_ppa014901mg [Prunus persica]
gi|462395671|gb|EMJ01470.1| hypothetical protein
PRUPE_ppa014901mg [Prunus persica]
Length = 629
Score = 486 bits (1250), Expect = e-134
Identities = 247/426 (57%), Positives = 317/426 (74%), Gaps = 1/426 (0%)
Frame = -2
Query: 1278 HSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGD-VDNALQFFYEMPDKNSY 1102
H L +K LN AK+IHAQLIKVG +HTFLGNR LD Y RFG+ V +AL+ F E+ DKN
Sbjct: 21 HCLSLKSLNFAKVIHAQLIKVGFNSHTFLGNRCLDVYFRFGNTVYDALKVFDEITDKNIV 80
Query: 1101 TWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVD 922
+WN+ L G + G +++A ++F EM DVVSWNSMISG S GF +A + +M
Sbjct: 81 SWNICLKGFCRFGELQRAHNMFAEMPVRDVVSWNSMISGCVSGGFFDNAFCLFSKMQIAG 140
Query: 921 VKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGV 742
++PS +T+SI+MS V+ + KQIH +IR+G++LSN++LGN LI+MYG L VDYAFGV
Sbjct: 141 MRPSEYTFSIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGV 200
Query: 741 FLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQAL 562
F TM VD+ISWNSLI GC +SGY +L L QF MRST +SPD FTIS+VI +CCNL L
Sbjct: 201 FFTMEEVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVINVCCNLPNL 260
Query: 561 AKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGY 382
KGKQ+F+ + +GFLSNSI+SSA I +FSKC+ L+D+I+LFEE+ WDS + NS+IS Y
Sbjct: 261 EKGKQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSY 320
Query: 381 SRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYT 202
+RH A+QLF+L L+ENLRPTEFTLS++L SAS F+PAE G QIH LV+KLGFE+
Sbjct: 321 ARHECVEDALQLFVLTLRENLRPTEFTLSSLLNSASIFLPAELGSQIHSLVVKLGFESDP 380
Query: 201 IVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMFELLLKT 22
IVASSL+D YSK GLI A+K+FA +G++DL SWNTMI+G A NG+ E L +FE L+
Sbjct: 381 IVASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMAHNGKVFETLNIFEELISE 440
Query: 21 GPWPDK 4
G PDK
Sbjct: 441 GIAPDK 446
Score = 119 bits (297), Expect = 6e-24
Identities = 98/390 (25%), Positives = 178/390 (45%), Gaps = 9/390 (2%)
Frame = -2
Query: 1266 VKCLNSAKIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNV 1090
V C K IH +I+ G+ ++ LGN L+D Y + G VD A F+ M
Sbjct: 155 VTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGVFFTME--------- 205
Query: 1089 LLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPS 910
E D++SWNS+ISG +G+ AL+ QM S P
Sbjct: 206 ----------------------EVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPD 243
Query: 909 AFTYSILMSC---VSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVF 739
FT S +++ + + + KQI ++ G LSN ++ + I+++ ++ A +F
Sbjct: 244 EFTISSVINVCCNLPNLEKGKQIFAFCLKVGF-LSNSIISSAAIDLFSKCNRLEDAIRLF 302
Query: 738 LTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALA 559
++ D NS+I + + L F P FT+S+++
Sbjct: 303 EELDWWDSAVCNSMISSYARHECVEDALQLFVLTLRENLRPTEFTLSSLLNSASIFLPAE 362
Query: 558 KGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYS 379
G Q+ SL V +GF S+ IV+S++I +SK +++ ++K+F + D N++I G +
Sbjct: 363 LGSQIHSLVVKLGFESDPIVASSLIDFYSKVGLINYAMKIFANVGVKDLTSWNTMIIGMA 422
Query: 378 RHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTI 199
+G + +F ++ E + P + TL+ +L + + ++G+ + + K Y I
Sbjct: 423 HNGKVFETLNIFEELISEGIAPDKLTLAGVLLACNLGGLVDEGMTMFLSMEK----EYGI 478
Query: 198 VAS-----SLVDMYSKAGLIESALKVFAKM 124
V S+VD+ S G ++ A+ + A+M
Sbjct: 479 VPQDEHYMSIVDLLSSTGKLKEAIDIVAEM 508
>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 477 bits (1228), Expect = e-132
Identities = 238/408 (58%), Positives = 308/408 (75%)
Frame = -2
Query: 1227 LIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFKSGYVEKA 1048
LIKVG HTFLGNR LD YS+ G +++L+ F ++ DKN +WN+ L + G +E+A
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 1047 RHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSA 868
R +FDEM + DVVSWN+MISGY S G A +M ++PS FTYS L+S VSSA
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855
Query: 867 LQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILG 688
+ KQIH +IR+G+ LSNVV+GN LI MYG +VDYAFGVF+TM +D+ISWNSLI
Sbjct: 856 CRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWS 915
Query: 687 CDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFLSN 508
C KSGY +L L QF MRS GYSPD FT+STVIT+C NLQ L KG+Q+F+L + +GFLSN
Sbjct: 916 CGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSN 975
Query: 507 SIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILK 328
SIVSSA I +FSKC+ L+DS+++FEE+++WDS++ N++IS Y+ HGF A+QLF+L L+
Sbjct: 976 SIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLR 1035
Query: 327 ENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIES 148
ENLRPTEFTLS +L++ S +P +QG QIH LV+K G E+ IVASSLV+MY+K GLI+S
Sbjct: 1036 ENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDS 1095
Query: 147 ALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMFELLLKTGPWPDK 4
A+K FAK+G RDL+SWNTMIMG A NGR +ALE+F+ LL GP PD+
Sbjct: 1096 AMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDE 1143
Score = 201 bits (511), Expect = 1e-48
Identities = 134/464 (28%), Positives = 222/464 (47%), Gaps = 68/464 (14%)
Frame = -2
Query: 1197 FLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEP 1018
F N +++ Y + G +L+ F MP K++++WNV++ G K G +E AR LF+EM
Sbjct: 74 FSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWK 133
Query: 1017 DVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQ------AK 856
+ ++WNSMI GYA NG A+ + + + ++ +L + V + K
Sbjct: 134 NGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGK 193
Query: 855 QIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD-------------- 718
QIH I+ + +V LG+ L+N+YG +D A V M D
Sbjct: 194 QIHARIVVDEVEFDSV-LGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASC 252
Query: 717 -----------------VISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVI 589
V+ WNS+I G + L F +MR G D+ T ++V+
Sbjct: 253 GRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVL 312
Query: 588 TICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSL 409
+ C L + +G QV + +GF ++ I+ SA++ M+SKC DD+ KLF ++ +D++
Sbjct: 313 SACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTI 372
Query: 408 ISNSVIS-------------------------------GYSRHGFHGRAMQLFMLILKEN 322
+ NS+I+ G+S++ A+ LF + K
Sbjct: 373 LLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLG 432
Query: 321 LRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIESAL 142
LR +F+L+ ++++ + E G QI +G E I+++SLVD Y K GL+E
Sbjct: 433 LRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGR 492
Query: 141 KVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMFELLLKTGPWP 10
K+F +M D V WN+M+MG+A NG +EAL +F+ + G P
Sbjct: 493 KLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQP 536
Score = 177 bits (448), Expect = 2e-41
Identities = 118/471 (25%), Positives = 230/471 (48%), Gaps = 42/471 (8%)
Frame = -2
Query: 1302 FFYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYE 1123
F + ++ ++ L+ K IHA+++ + + LG+ L++ Y + GD+D+A
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNL 233
Query: 1122 MPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVV 943
M + ++++ + L+ G G + AR +F + VV WNSMISGY +N ALE+
Sbjct: 234 MKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELF 293
Query: 942 QQMLSVDVKPSAFTY-SILMSCVSSAL--QAKQIH------------------------- 847
M V+ T+ S+L +C + + Q Q+H
Sbjct: 294 NNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKC 353
Query: 846 -----CCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILGCD 682
C + S L + +L N +I +Y +D A +F TM +ISWNS+I+G
Sbjct: 354 RRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFS 413
Query: 681 KSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFLSNSI 502
++ L F M G D F+++ VI+ C ++ +L G+Q+F+ + ++G + I
Sbjct: 414 QNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQI 473
Query: 501 VSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKEN 322
+S++++ + KC +++ KLF+ M + D + NS++ GY+ +G A+ +F +
Sbjct: 474 ISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVG 533
Query: 321 LRPTEFTLSNILTSASCFVPAEQG--------IQIHPLVLKLGFEAYTIVASSLVDMYSK 166
++PT+ T +L++ E+G + H + G E Y S +VD+Y++
Sbjct: 534 VQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYH---INPGIEHY----SCMVDLYAR 586
Query: 165 AGLIESALKVFAKMGIR-DLVSWNTMIMGFARNGRSVEALEMFELLLKTGP 16
AGL+E A+ + +M ++ D W++++ G +G ++ ++ + ++ P
Sbjct: 587 AGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDP 637
Score = 123 bits (308), Expect = 3e-25
Identities = 103/402 (25%), Positives = 185/402 (46%), Gaps = 9/402 (2%)
Frame = -2
Query: 1302 FFYSNLIDHSLHVKCLNSAKIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFY 1126
F YS L+ V K IHA +I+ G+ ++ +GN L+ Y +FG VD A
Sbjct: 843 FTYSTLLSF---VSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFG--- 896
Query: 1125 EMPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEV 946
+F M E D++SWNS+I +G+ AL
Sbjct: 897 ----------------------------VFITMEELDIISWNSLIWSCGKSGYQNLALRQ 928
Query: 945 VQQMLSVDVKPSAFTYSILMSCVSSAL---QAKQIHCCIIRSGLSLSNVVLGNGLINMYG 775
M SV P FT S +++ S+ + +QI IR G LSN ++ + I+++
Sbjct: 929 FVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGF-LSNSIVSSASIDLFS 987
Query: 774 GLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTIST 595
++ + VF + D + N++I G+G+ L F P FT+S
Sbjct: 988 KCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSI 1047
Query: 594 VITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWD 415
V++ L + +G Q+ SL V G S+ IV+S+++ M++K ++D ++K F ++ D
Sbjct: 1048 VLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARD 1107
Query: 414 SLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHP 235
+ N++I G + +G +A+++F +L P E TL+ +L + + ++G+ I
Sbjct: 1108 LISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFS 1167
Query: 234 LVLKLGFEAYTIVA-----SSLVDMYSKAGLIESALKVFAKM 124
+ K Y ++ + +VDM S+ G ++ A+ + M
Sbjct: 1168 SMEK----EYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELM 1205
Score = 84.0 bits (206), Expect = 2e-13
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 32/212 (15%)
Frame = -2
Query: 543 FSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFE----------------------- 433
F + + +GF +++ + + + ++S+ +DS+++FE
Sbjct: 733 FDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGEL 792
Query: 432 --------EMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSA 277
EM + D + N++ISGY G A + F + K +RP+ FT S +L+
Sbjct: 793 ERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFV 852
Query: 276 SCFVPAEQGIQIHPLVLKLGFE-AYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSW 100
S A +G QIH +++ G + + +V +SL+ MY K G+++ A VF M D++SW
Sbjct: 853 S---SACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISW 909
Query: 99 NTMIMGFARNGRSVEALEMFELLLKTGPWPDK 4
N++I ++G AL F L+ G PD+
Sbjct: 910 NSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQ 941
Score = 78.2 bits (191), Expect = 1e-11
Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 37/326 (11%)
Frame = -2
Query: 873 SALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLI 694
S + + +H ++SG+ S + +GN L+ MY + A +F M + SWN++I
Sbjct: 21 SIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMI 80
Query: 693 LGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFL 514
G KSG L F SM K FS +VV
Sbjct: 81 EGYLKSGSKGKSLELFDSM--------------------------PHKDAFSWNVV---- 110
Query: 513 SNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLI 334
I F+K L+ + +LF EM + + NS+I GY+ +G A+ LF +
Sbjct: 111 ---------ISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDL 161
Query: 333 LKENLRPTE------FTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMY 172
+L P E F L+ ++ + + + G QIH ++ E +++ SSLV++Y
Sbjct: 162 ---SLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLY 218
Query: 171 SKAGLIESALKVFAKMGIRD-------------------------------LVSWNTMIM 85
K G I+SA V M D +V WN+MI
Sbjct: 219 GKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMIS 278
Query: 84 GFARNGRSVEALEMFELLLKTGPWPD 7
G+ N ++EALE+F + + G D
Sbjct: 279 GYVANNEALEALELFNNMRRKGVQED 304
Score = 60.5 bits (145), Expect = 3e-06
Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Frame = -2
Query: 1239 IHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFKSGY 1060
IH+ ++K GL + + + L++ Y++FG +D+A++ F ++ ++ +WN +++GL +G
Sbjct: 1064 IHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGR 1123
Query: 1059 VEKARHLFDEM----AEPDVVSWNSMISGYASNGFVGHALEVVQQM-LSVDVKPSAFTYS 895
V KA +F E+ PD ++ ++ G V L + M V P+ Y+
Sbjct: 1124 VSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYA 1183
Query: 894 ILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGL--INMYGGLRLVD 757
++ +S + K+ + S ++ G+ L +YG LR +
Sbjct: 1184 CIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTE 1231
>ref|XP_007019280.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508724608|gb|EOY16505.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 645
Score = 474 bits (1219), Expect = e-131
Identities = 240/431 (55%), Positives = 318/431 (73%)
Frame = -2
Query: 1296 YSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEMP 1117
Y+NLI+H L +K + A+ IHAQLIK G TFLGN ++ Y + G ++A + F E+
Sbjct: 19 YTNLINHCLSLKSIQFAQTIHAQLIKFGFGRITFLGNCFVNLYFKVGSFNDASKVFDEIN 78
Query: 1116 DKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQ 937
DKN +WN+ L GL K G+ +KA +FDEM DVVSWNSMISG GF G+ L V ++
Sbjct: 79 DKNIISWNIFLNGLLKFGHFKKACLMFDEMPAKDVVSWNSMISGCGWLGFWGYGLAVFKE 138
Query: 936 MLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVD 757
M + V+PS FT+SIL + VS A Q K+IH II SG+ LSN+V+GN LI+MYG L LVD
Sbjct: 139 MHNCGVRPSKFTFSILTTFVSCASQGKEIHGNIITSGVGLSNLVIGNSLIDMYGKLGLVD 198
Query: 756 YAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICC 577
YAFGVF M VDV+SWNSLI GC SGY D+ L QF MR GYSPD FTIS VI++C
Sbjct: 199 YAFGVFFNMEEVDVVSWNSLISGCCNSGYEDMALKQFDQMRFAGYSPDEFTISNVISVCT 258
Query: 576 NLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNS 397
NL+ L KGK++F+L V +GF+SNSIVSSA I +FSKC+ L+DS+KLFEE+ RWDS++ +S
Sbjct: 259 NLRNLDKGKEIFALCVKVGFISNSIVSSATIDLFSKCNRLEDSVKLFEEVERWDSVLCSS 318
Query: 396 VISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLG 217
+IS Y+RHG A+ LF+L L+E+ RPTEF +S I+ S F+ AEQG Q+H LV+K G
Sbjct: 319 MISSYARHGLQDDALLLFVLSLREDCRPTEFAIS-IVLSCITFISAEQGHQVHSLVIKSG 377
Query: 216 FEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMFE 37
FE+ +IVA SLVDMY+K GLI+ A+++F++M ++D++SWNT+IMG A NGR+VE LE+++
Sbjct: 378 FESESIVACSLVDMYAKIGLIDPAMQIFSEMHVKDIISWNTLIMGLAHNGRAVETLEIYK 437
Query: 36 LLLKTGPWPDK 4
LL+ GP PD+
Sbjct: 438 ELLREGPAPDR 448
Score = 128 bits (321), Expect = 1e-26
Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 6/403 (1%)
Frame = -2
Query: 1266 VKCLNSAKIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNV 1090
V C + K IH +I G+ ++ +GN L+D Y + G VD A F+ M
Sbjct: 158 VSCASQGKEIHGNIITSGVGLSNLVIGNSLIDMYGKLGLVDYAFGVFFNME--------- 208
Query: 1089 LLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPS 910
E DVVSWNS+ISG ++G+ AL+ QM P
Sbjct: 209 ----------------------EVDVVSWNSLISGCCNSGYEDMALKQFDQMRFAGYSPD 246
Query: 909 AFTYSILMSCVSSAL---QAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVF 739
FT S ++S ++ + K+I ++ G +SN ++ + I+++ ++ + +F
Sbjct: 247 EFTISNVISVCTNLRNLDKGKEIFALCVKVGF-ISNSIVSSATIDLFSKCNRLEDSVKLF 305
Query: 738 LTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALA 559
+ D + +S+I + G D L+ F P F IS V++ C +
Sbjct: 306 EEVERWDSVLCSSMISSYARHGLQDDALLLFVLSLREDCRPTEFAISIVLS-CITFISAE 364
Query: 558 KGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYS 379
+G QV SL + GF S SIV+ +++ M++K ++D ++++F EMH D + N++I G +
Sbjct: 365 QGHQVHSLVIKSGFESESIVACSLVDMYAKIGLIDPAMQIFSEMHVKDIISWNTLIMGLA 424
Query: 378 RHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQI-HPLVLKLGFEAYT 202
+G ++++ +L+E P TL+ +L + + G+ I + K G
Sbjct: 425 HNGRAVETLEIYKELLREGPAPDRITLAGVLLACRYGAFVDIGMSIFSSMEEKFGVIPCD 484
Query: 201 IVASSLVDMYSKAGLIESALKVFAKMGI-RDLVSWNTMIMGFA 76
+ +V++ AG ++ A + M + W ++++ A
Sbjct: 485 EHYACIVELLCHAGKVKEACDILEAMPFDPSYLVWESIVLATA 527
>ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Citrus sinensis]
Length = 640
Score = 473 bits (1217), Expect = e-130
Identities = 242/432 (56%), Positives = 313/432 (72%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
+ S LID L K + AK IH L K+G HT+LGNR LD YSRFG D+ LQ F E+
Sbjct: 17 YCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEI 76
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
P KN +WN+ L GL KS ++ A +FDE+ EPDVVSWNSMISGYAS G+ +ALE+
Sbjct: 77 PQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFS 136
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+M V+PS FT+SIL+S VSSA KQIH +IRSGLSLSNVVLGN LI+MYG L ++
Sbjct: 137 KMQLQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVL 196
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
YAFGVFL M +D+ISWNSLI GC SGYG+L L QF SMR +G SPD +TIS +I C
Sbjct: 197 YYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGNSPDEYTISIIINAC 256
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
L+ L KGKQVF+LSV +GFLSNSIV SA I +FSKC+ L+DS++LFE++ RWD + N
Sbjct: 257 TKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN 316
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
+IS Y R+GF A++LF L+L+E++RPTEFTLS +L+S P E G Q H + +K
Sbjct: 317 VMISSYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKS 375
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
GF++ +VASSL++MY+K G I+S+ ++F K+ RDLVSWNT++MG +NGR+ E L++F
Sbjct: 376 GFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVF 435
Query: 39 ELLLKTGPWPDK 4
E LL+ G PD+
Sbjct: 436 EELLEEGLPPDR 447
Score = 94.0 bits (232), Expect = 2e-16
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 21/319 (6%)
Frame = -2
Query: 1278 HSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNR--------LLDFYSRFGDVDNALQFFYE 1123
+SL C NS + +L Y+ + GN +++ ++ ++D Q F
Sbjct: 215 NSLISGCFNSG---YGELALDQFYSMRYSGNSPDEYTISIIINACTKLRNLDKGKQVFAL 271
Query: 1122 MPDKNSYTWNVLL---IGLF-KSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHA 955
+ +++L I LF K +E + LF+++ D N MIS Y GF A
Sbjct: 272 SVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISSYGRYGFGEVA 331
Query: 954 LEVVQQMLSVDVKPSAFTYSILMSCVS--SALQAKQIHCCIIRSGLSLSNVVLGNGLINM 781
LE+ Q ML D++P+ FT S ++S + Q H I+SG SN V+ + L+ M
Sbjct: 332 LELFQLMLREDIRPTEFTLSCVLSSIPIPPVEHGSQFHSMAIKSGFD-SNAVVASSLMEM 390
Query: 780 YGGLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTI 601
Y +D + +F+ ++ D++SWN++++G ++G L F + G PD T+
Sbjct: 391 YAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITL 450
Query: 600 STVITICCNLQALAKGKQVFS-LSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEM- 427
V+ C + KG VFS + G + + II + + L +I + M
Sbjct: 451 VAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMP 510
Query: 426 -----HRWDSLISNSVISG 385
W+S++ S I G
Sbjct: 511 FQPGCSIWESILRASAIYG 529
>ref|XP_002306667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856116|gb|EEE93663.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 630
Score = 469 bits (1207), Expect = e-129
Identities = 243/432 (56%), Positives = 310/432 (71%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
+YS LIDH +K L+ A+I HAQLIKVGL HTFLGNR LD YS+FG+V++AL+ F ++
Sbjct: 18 YYSYLIDHCFSLKSLSFARITHAQLIKVGLNRHTFLGNRCLDLYSQFGNVNDALKVFDDI 77
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
KN +WN+ L GL K + A +FD+M E DVVSWNSMISGYAS G+ ALE
Sbjct: 78 SSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMISGYASRGYFDCALETFW 137
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+M + V+PS FTYSILMS V K+IH I+RSGL NVVLGN LI+MYG +
Sbjct: 138 EMQKLGVRPSEFTYSILMSVVFGVRHGKEIHGSIVRSGLGALNVVLGNSLIDMYGKFSSL 197
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
DYA GVFLTM +DVISWNSLI C +SGY +L L +F MRS GYSPD F++S VIT C
Sbjct: 198 DYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYSPDEFSVSVVITSC 257
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
NL+ L KGKQ+F+L V +GFL N+I+SSA I +FSKC+ L+DS++LFEE +WDS + N
Sbjct: 258 LNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSVRLFEEQDQWDSAVCN 317
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
S+IS Y+R GF ++LF+L LK+++RPTEFTLS++L S S + EQG Q H L +K
Sbjct: 318 SMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTS-ILKLEQGTQFHSLAVKS 376
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
G E IVASSLV+MYSK G I+ ++K+F KM RDL++WNTMIMG NGR EAL+ F
Sbjct: 377 GLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVFEALQTF 436
Query: 39 ELLLKTGPWPDK 4
+ L++TG PD+
Sbjct: 437 KELIRTGLPPDR 448
Score = 121 bits (303), Expect = 1e-24
Identities = 106/398 (26%), Positives = 185/398 (46%), Gaps = 5/398 (1%)
Frame = -2
Query: 1302 FFYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYN-HTFLGNRLLDFYSRFGDVDNALQFFY 1126
F YS L+ V+ K IH +++ GL + LGN L+D Y +F +D AL F
Sbjct: 149 FTYSILMSVVFGVR---HGKEIHGSIVRSGLGALNVVLGNSLIDMYGKFSSLDYALGVFL 205
Query: 1125 EMPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEV 946
M E DV+SWNS+IS +G+ AL+
Sbjct: 206 TME-------------------------------ELDVISWNSLISVCCQSGYPELALDK 234
Query: 945 VQQMLSVDVKPSAFTYSILM-SCVS--SALQAKQIHCCIIRSGLSLSNVVLGNGLINMYG 775
M S+ P F+ S+++ SC++ + + KQI ++ G L N ++ + I+++
Sbjct: 235 FCIMRSLGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKVGF-LCNTIISSATIDLFS 293
Query: 774 GLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTIST 595
++ + +F + D NS+I + G+ + GL F P FT+S+
Sbjct: 294 KCNRLEDSVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSS 353
Query: 594 VITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWD 415
V+ L+ L +G Q SL+V G ++IV+S+++ M+SK +D SIK+F +M D
Sbjct: 354 VLHSTSILK-LEQGTQFHSLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARD 412
Query: 414 SLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQI-H 238
+ N++I G + +G A+Q F +++ L P TL+ +L + S +G+ +
Sbjct: 413 LIAWNTMIMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTVFS 472
Query: 237 PLVLKLGFEAYTIVASSLVDMYSKAGLIESALKVFAKM 124
+ + G + + VD+ +AG ++ AL V M
Sbjct: 473 SMEERYGVKPSNEHYACFVDLLCQAGRLDEALYVAESM 510
>ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 457 bits (1175), Expect = e-125
Identities = 233/431 (54%), Positives = 308/431 (71%), Gaps = 1/431 (0%)
Frame = -2
Query: 1293 SNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEMPD 1114
S L++H L K LN KI+HA +K+GL +T+LGNR LD YS FG +++AL+ F ++
Sbjct: 19 SLLLNHCLSQKSLNCVKIVHAHFLKLGLNTYTYLGNRCLDLYSEFGHINDALKVFDDISH 78
Query: 1113 KNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQM 934
KNS +WN+ L GL KSG KA H+FD M DVVSWNSMISGYAS G++ HALE+ +M
Sbjct: 79 KNSTSWNICLKGLLKSGQPGKACHMFDAMPVRDVVSWNSMISGYASCGYLSHALELFVEM 138
Query: 933 LSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDY 754
V+PS FT+SILMS VSS+ AKQIHC +IRSG+ L NVVLGN LIN+YG L LV+Y
Sbjct: 139 QGTGVRPSGFTFSILMSLVSSSPHAKQIHCRMIRSGVDLDNVVLGNSLINIYGKLGLVEY 198
Query: 753 AFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCN 574
AFGV + M DVISWNSLI C +G+ +L L QF MR PD FT S ++++C N
Sbjct: 199 AFGVIMIMKQFDVISWNSLIWACHSAGHHELALEQFYRMRGAELLPDQFTCSVLMSVCSN 258
Query: 573 LQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSV 394
L+ L KGKQVF+ MGF+ NSIVSSA I +FSKC+ L+DS++LF++ +WDS + NS+
Sbjct: 259 LRDLDKGKQVFAFCFKMGFIYNSIVSSAAIDLFSKCNRLEDSVRLFKKQDQWDSPLCNSM 318
Query: 393 ISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLGF 214
IS ++RH A+QLF+L L++N+RPTE+ +S++L+S S F+P E G QIH LV KLGF
Sbjct: 319 ISSFARHDLGENALQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIHSLVPKLGF 378
Query: 213 EAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF-E 37
E+ +VA+SLVDMY+K G I AL +F +M I+DLVSWNT++MG GR +++F E
Sbjct: 379 ESDAVVANSLVDMYAKFGFIGDALNIFNEMKIKDLVSWNTIMMGLTYYGRVSLTMDLFRE 438
Query: 36 LLLKTGPWPDK 4
LL + G PD+
Sbjct: 439 LLTREGILPDR 449
Score = 90.5 bits (223), Expect = 2e-15
Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 11/282 (3%)
Frame = -2
Query: 1182 LLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLL----IGLF-KSGYVEKARHLFDEMAEP 1018
L+ S D+D Q F K + +N ++ I LF K +E + LF + +
Sbjct: 252 LMSVCSNLRDLDKGKQVF-AFCFKMGFIYNSIVSSAAIDLFSKCNRLEDSVRLFKKQDQW 310
Query: 1017 DVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQAK---QIH 847
D NSMIS +A + +AL++ L +++P+ + S L+S VS L + QIH
Sbjct: 311 DSPLCNSMISSFARHDLGENALQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIH 370
Query: 846 CCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYG 667
+ + G S+ V+ N L++MY + A +F M + D++SWN++++G G
Sbjct: 371 SLVPKLGFE-SDAVVANSLVDMYAKFGFIGDALNIFNEMKIKDLVSWNTIMMGLTYYGRV 429
Query: 666 DLGLVQFRSMRST-GYSPDHFTISTVITICCNLQALAKGKQVF-SLSVVMGFLSNSIVSS 493
L + FR + + G PD T++ V+ C + +G ++F S+ + G +
Sbjct: 430 SLTMDLFRELLTREGILPDRITLTAVLLACNYGLLVDEGIKIFSSMEMEFGVKPGEEHYA 489
Query: 492 AIIGMFSKCDILDDSIKLFEEMH-RWDSLISNSVISGYSRHG 370
++ M SK L ++I + E M R S I S++S + +G
Sbjct: 490 CVVEMLSKAGKLKEAIDIIETMPCRTTSDIWRSILSACAIYG 531
Score = 71.2 bits (173), Expect = 2e-09
Identities = 59/243 (24%), Positives = 118/243 (48%), Gaps = 32/243 (13%)
Frame = -2
Query: 636 RSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDIL 457
++ G P S ++ C + ++L K V + + +G + + + + + ++S+ +
Sbjct: 7 QAQGPYPSLSCCSLLLNHCLSQKSLNCVKIVHAHFLKLGLNTYTYLGNRCLDLYSEFGHI 66
Query: 456 DDSIKLFEEM-------------------------HRWDSL-----IS-NSVISGYSRHG 370
+D++K+F+++ H +D++ +S NS+ISGY+ G
Sbjct: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQPGKACHMFDAMPVRDVVSWNSMISGYASCG 126
Query: 369 FHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIV-A 193
+ A++LF+ + +RP+ FT S +++ S A+ QIH +++ G + +V
Sbjct: 127 YLSHALELFVEMQGTGVRPSGFTFSILMSLVSSSPHAK---QIHCRMIRSGVDLDNVVLG 183
Query: 192 SSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMFELLLKTGPW 13
+SL+++Y K GL+E A V M D++SWN++I G ALE F +
Sbjct: 184 NSLINIYGKLGLVEYAFGVIMIMKQFDVISWNSLIWACHSAGHHELALEQFYRMRGAELL 243
Query: 12 PDK 4
PD+
Sbjct: 244 PDQ 246
>ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 446 bits (1147), Expect = e-122
Identities = 230/433 (53%), Positives = 304/433 (70%), Gaps = 1/433 (0%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
+ S L++H L K LN KI+HA +K+GL +T+LGNR LD YS FG +++A + F ++
Sbjct: 17 YCSLLLNHCLSKKSLNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSEFGHLNDAPKVFDDI 76
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
KNS +WN+ L L KSG KA HLFD M DVV+WNSMISGYAS G+ HALE+
Sbjct: 77 SHKNSTSWNICLKWLLKSGQFGKACHLFDAMPVRDVVTWNSMISGYASCGYFSHALELFV 136
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+M V+PS FT+SILMS VSS AKQIH +IRSG+ L NVVLGN LI MYG L LV
Sbjct: 137 EMQGTGVRPSGFTFSILMSLVSSPSHAKQIHSRMIRSGVDLDNVVLGNSLITMYGRLGLV 196
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
+Y+FGV +TM DVISWNSLI C ++G+ +L L QF MR + PD FT S ++++C
Sbjct: 197 EYSFGVIMTMKQFDVISWNSLIWACHRAGHHELALEQFYWMRGAEFLPDQFTCSVLMSVC 256
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
NL+ L KGKQVF+ MGF+ NSIVSSA I +FSKC+ L+DS++LF+E +WDS + N
Sbjct: 257 SNLRDLDKGKQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLEDSVRLFKEQDQWDSALCN 316
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
S+IS Y+RH +QLF+L L++N+RPTE+ +S++L+S S F+P E G QIH LV KL
Sbjct: 317 SMISSYARHYLGEDTLQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIHSLVPKL 376
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
GFE+ +VA+SLV MY+K G I AL +F +M I+DLVSWNT++MG GR +++F
Sbjct: 377 GFESDAVVANSLVHMYAKFGFINDALNIFNEMKIKDLVSWNTIMMGLTYYGRVSLTMDLF 436
Query: 39 -ELLLKTGPWPDK 4
ELL + G PD+
Sbjct: 437 RELLTREGMLPDR 449
Score = 89.0 bits (219), Expect = 7e-15
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 12/283 (4%)
Frame = -2
Query: 1182 LLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLL----IGLF-KSGYVEKARHLFDEMAEP 1018
L+ S D+D Q F K + +N ++ I LF K +E + LF E +
Sbjct: 252 LMSVCSNLRDLDKGKQVF-AFCFKMGFVYNSIVSSAAIDLFSKCNRLEDSVRLFKEQDQW 310
Query: 1017 DVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQAK---QIH 847
D NSMIS YA + L++ L +++P+ + S L+S VS L + QIH
Sbjct: 311 DSALCNSMISSYARHYLGEDTLQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIH 370
Query: 846 CCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYG 667
+ + G S+ V+ N L++MY ++ A +F M + D++SWN++++G G
Sbjct: 371 SLVPKLGFE-SDAVVANSLVHMYAKFGFINDALNIFNEMKIKDLVSWNTIMMGLTYYGRV 429
Query: 666 DLGLVQFRSMRST-GYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGF--LSNSIVS 496
L + FR + + G PD T++ V+ C + +G ++FS S+ M F
Sbjct: 430 SLTMDLFRELLTREGMLPDRITLTAVLLACNYGLLVDEGIEIFS-SMEMEFRVKPGEEHY 488
Query: 495 SAIIGMFSKCDILDDSIKLFEEM-HRWDSLISNSVISGYSRHG 370
+ ++ M K L ++I + E M +R S I S+ S + +G
Sbjct: 489 ACVVEMLCKAGKLKEAIDIIETMPYRTTSDIWRSIFSACAIYG 531
>ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 444 bits (1141), Expect = e-122
Identities = 230/435 (52%), Positives = 304/435 (69%)
Frame = -2
Query: 1308 LIFFYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFF 1129
L+ YS+LI L + +++AK IH QL+K+GL ++TFL NR L Y+ FG V + L+ F
Sbjct: 15 LLSHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVF 74
Query: 1128 YEMPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALE 949
+ DKN +WN+ L G+F+ G V+ ARHLFD M E D+VSWN+MISGY S+GFV A+
Sbjct: 75 DGIKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFVNSAMG 134
Query: 948 VVQQMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGL 769
V +M + +PS +T+SIL+S V SA KQ+H +IRSG+ +S++VLGN LI+MYG +
Sbjct: 135 VSLEMQNAGFRPSEYTFSILLSLVPSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKV 194
Query: 768 RLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVI 589
LVDY F +F +M VDVISWNSLILGC +SG+ L L QF MR+T +SPD FTIS VI
Sbjct: 195 GLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI 254
Query: 588 TICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSL 409
+ICC LQ L GKQ+F+ MGF SNSIV SA I +FSKCD L +++LFE+ ++WD +
Sbjct: 255 SICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQWDPV 314
Query: 408 ISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLV 229
+ N +IS ++ HG +M LF+ L+ENL P + TLS++L+S S F P E G QIH LV
Sbjct: 315 LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLV 374
Query: 228 LKLGFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEAL 49
LKLGF++ IV SSLVDMY+K G I+ A+KVF M RDL+SWNTMIMG NG+ EAL
Sbjct: 375 LKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL 434
Query: 48 EMFELLLKTGPWPDK 4
F L+ G PD+
Sbjct: 435 HTFNKLVMEGVLPDR 449
Score = 118 bits (296), Expect = 8e-24
Identities = 89/339 (26%), Positives = 165/339 (48%), Gaps = 4/339 (1%)
Frame = -2
Query: 1005 WNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCI-IRS 829
++S+I G V +A + Q+L + + + F + C+ +H + +
Sbjct: 19 YSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTF---LANRCLQLYALFGPVHDVLKVFD 75
Query: 828 GLSLSNVVLGNGLINMYGGLRL--VDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGL 655
G+ N++ N I + G R VD A +F M D++SWN++I G SG+ + +
Sbjct: 76 GIKDKNIISWN--ICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFVNSAM 133
Query: 654 VQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGF-LSNSIVSSAIIGM 478
M++ G+ P +T S ++++ + + GKQV + G +S+ ++ +++I M
Sbjct: 134 GVSLEMQNAGFRPSEYTFSILLSL---VPSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDM 190
Query: 477 FSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTL 298
+ K ++D +F M + D + NS+I G R GF A+ F L+ P +FT+
Sbjct: 191 YGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTI 250
Query: 297 SNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIESALKVFAKMGI 118
S +++ C E G QI K+GF + +IV S+ +D++SK ++ A+++F
Sbjct: 251 SMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQ 310
Query: 117 RDLVSWNTMIMGFARNGRSVEALEMFELLLKTGPWPDKT 1
D V N MI FA +G +++ +F L+ P T
Sbjct: 311 WDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDT 349
Score = 111 bits (278), Expect = 1e-21
Identities = 99/416 (23%), Positives = 186/416 (44%), Gaps = 6/416 (1%)
Frame = -2
Query: 1245 KIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFK 1069
K +H +I+ G+ + LGN L+D Y + G VD
Sbjct: 165 KQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFV---------------------- 202
Query: 1068 SGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSIL 889
+F M + DV+SWNS+I G +GF AL M + + P FT S++
Sbjct: 203 ---------IFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMV 253
Query: 888 MS---CVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD 718
+S C+ KQI + G + +++VL + I+++ + A +F N D
Sbjct: 254 ISICCCLQELELGKQIFAFCFKMGFTSNSIVL-SATIDLFSKCDSLKVAVQLFEDTNQWD 312
Query: 717 VISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFS 538
+ N +I G+ + F P T+S+V++ + G Q+ +
Sbjct: 313 PVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHN 372
Query: 537 LSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGR 358
L + +GF S+ IV+S+++ M++K +DD++K+F +M D + N++I G +G +
Sbjct: 373 LVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFE 432
Query: 357 AMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQI-HPLVLKLGFEAYTIVASSLV 181
A+ F ++ E + P TL+ +L + S E+G+ I + + G S +V
Sbjct: 433 ALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVV 492
Query: 180 DMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALE-MFELLLKTGP 16
++ S+AG E A+ + + ++ T ++G ++ +E + E ++K P
Sbjct: 493 NLLSRAGKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEP 548
>ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 443 bits (1139), Expect = e-121
Identities = 230/435 (52%), Positives = 304/435 (69%)
Frame = -2
Query: 1308 LIFFYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFF 1129
L+ YS+LI L + +++AK IH QL+K+GL ++TFL NR L Y+ FG V + L+ F
Sbjct: 15 LLSHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVF 74
Query: 1128 YEMPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALE 949
+ DKN +WN+ L G+F+ G V+ ARHLFD M E D+VSWN+MISGY S+GF A+
Sbjct: 75 DGIKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFGNSAMG 134
Query: 948 VVQQMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGL 769
V +M + +PS +T+SIL+S VSSA KQ+H +IRSG+ +S++VLGN LI+MYG +
Sbjct: 135 VSLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKV 194
Query: 768 RLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVI 589
LVDY F +F +M VDVISWNSLILGC +SG+ L L QF MR+T +SPD FTIS VI
Sbjct: 195 GLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVI 254
Query: 588 TICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSL 409
+ICC LQ L GKQ+F+ MGF SNSIV SA I +FSKCD L +++LFE+ ++WD +
Sbjct: 255 SICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQWDPV 314
Query: 408 ISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLV 229
+ N +IS ++ HG +M LF+ L+ENL P + TLS++L+S S F P E G QIH LV
Sbjct: 315 LCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLV 374
Query: 228 LKLGFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEAL 49
LKLGF++ IV SSLVDMY+K G I+ A+KVF M RDL+SWNTMIMG NG+ EAL
Sbjct: 375 LKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEAL 434
Query: 48 EMFELLLKTGPWPDK 4
F L+ G PD+
Sbjct: 435 HTFNKLVMEGVLPDR 449
Score = 122 bits (306), Expect = 6e-25
Identities = 90/339 (26%), Positives = 166/339 (48%), Gaps = 4/339 (1%)
Frame = -2
Query: 1005 WNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCI-IRS 829
++S+I G V +A + Q+L + + + F + C+ +H + +
Sbjct: 19 YSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTF---LANRCLQLYALFGPVHDVLKVFD 75
Query: 828 GLSLSNVVLGNGLINMYGGLRL--VDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGL 655
G+ N++ N I + G R VD A +F M D++SWN++I G SG+G+ +
Sbjct: 76 GIKDKNIISWN--ICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFGNSAM 133
Query: 654 VQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGF-LSNSIVSSAIIGM 478
M++ G+ P +T S ++++ + + GKQV + G +S+ ++ +++I M
Sbjct: 134 GVSLEMQNAGFRPSEYTFSILLSL---VSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDM 190
Query: 477 FSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTL 298
+ K ++D +F M + D + NS+I G R GF A+ F L+ P +FT+
Sbjct: 191 YGKVGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTI 250
Query: 297 SNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIESALKVFAKMGI 118
S +++ C E G QI K+GF + +IV S+ +D++SK ++ A+++F
Sbjct: 251 SMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKCDSLKVAVQLFEDTNQ 310
Query: 117 RDLVSWNTMIMGFARNGRSVEALEMFELLLKTGPWPDKT 1
D V N MI FA +G +++ +F L+ P T
Sbjct: 311 WDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDT 349
Score = 111 bits (278), Expect = 1e-21
Identities = 99/416 (23%), Positives = 186/416 (44%), Gaps = 6/416 (1%)
Frame = -2
Query: 1245 KIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFK 1069
K +H +I+ G+ + LGN L+D Y + G VD
Sbjct: 165 KQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFV---------------------- 202
Query: 1068 SGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSIL 889
+F M + DV+SWNS+I G +GF AL M + + P FT S++
Sbjct: 203 ---------IFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMV 253
Query: 888 MS---CVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD 718
+S C+ KQI + G + +++VL + I+++ + A +F N D
Sbjct: 254 ISICCCLQELELGKQIFAFCFKMGFTSNSIVL-SATIDLFSKCDSLKVAVQLFEDTNQWD 312
Query: 717 VISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFS 538
+ N +I G+ + F P T+S+V++ + G Q+ +
Sbjct: 313 PVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHN 372
Query: 537 LSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGR 358
L + +GF S+ IV+S+++ M++K +DD++K+F +M D + N++I G +G +
Sbjct: 373 LVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFE 432
Query: 357 AMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQI-HPLVLKLGFEAYTIVASSLV 181
A+ F ++ E + P TL+ +L + S E+G+ I + + G S +V
Sbjct: 433 ALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVV 492
Query: 180 DMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALE-MFELLLKTGP 16
++ S+AG E A+ + + ++ T ++G ++ +E + E ++K P
Sbjct: 493 NLLSRAGKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEP 548
>ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cicer arietinum]
Length = 643
Score = 434 bits (1115), Expect = e-119
Identities = 220/432 (50%), Positives = 308/432 (71%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
+ S L+ H L K K +HA+ +K+GL +T+LGNR++D Y+ FG +++AL+ F ++
Sbjct: 17 YCSFLLHHCLSHKSPYFLKTVHARFLKLGLNTYTYLGNRIIDLYTEFGHINDALKVFDDI 76
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
KNS +WN+ L GL KSG ++ A H+FDEM DVVSWN++ISGYAS GF HALE+
Sbjct: 77 SYKNSTSWNICLKGLVKSGQLDNACHMFDEMPVRDVVSWNTLISGYASYGFSSHALELFV 136
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+M S VKPS FT+SIL S VSS AKQ+H +IRSG+ LSNVVLGN LI MYG L LV
Sbjct: 137 EMQSTGVKPSWFTFSILTSLVSSPCHAKQVHGRMIRSGMDLSNVVLGNSLIAMYGKLGLV 196
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
DY+F VF TM +DVISWNSL+ C ++ +L L QF MR+ PD FT S ++++C
Sbjct: 197 DYSFDVFFTMKQLDVISWNSLMWACCRADCQELALEQFCYMRAAELLPDQFTCSILMSVC 256
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
NL+ L KGKQVF+ +GF+ NSIVSSA I +FSKC+ L+D+++LF+E +W+S + N
Sbjct: 257 SNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFKEHEQWNSALCN 316
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
S+IS Y+RH A+QLF+L L++N+ PTE+T+S +L+S + F+P E G QIH LV KL
Sbjct: 317 SMISCYARHDLGEDALQLFVLTLRKNIMPTEYTVSCLLSSVTIFLPIEVGNQIHALVPKL 376
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
GFE+ T+V SSLVDMY+K G I+ AL +F ++ +DLV+WNT++MG + NG+ +++F
Sbjct: 377 GFESDTVVVSSLVDMYAKFGFIDDALNIFNEIKTKDLVTWNTIMMGLSYNGKVSVTIDLF 436
Query: 39 ELLLKTGPWPDK 4
+ L++ G PD+
Sbjct: 437 KELVREGTPPDQ 448
Score = 112 bits (280), Expect = 6e-22
Identities = 92/400 (23%), Positives = 182/400 (45%), Gaps = 6/400 (1%)
Frame = -2
Query: 1248 AKIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLF 1072
AK +H ++I+ G+ ++ LGN L+ Y + G VD + F+ M
Sbjct: 163 AKQVHGRMIRSGMDLSNVVLGNSLIAMYGKLGLVDYSFDVFFTMK--------------- 207
Query: 1071 KSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSI 892
+ DV+SWNS++ ALE M + ++ P FT SI
Sbjct: 208 ----------------QLDVISWNSLMWACCRADCQELALEQFCYMRAAELLPDQFTCSI 251
Query: 891 LMSCVSSAL---QAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVV 721
LMS S+ + KQ+ + G + N ++ + I+++ ++ A +F
Sbjct: 252 LMSVCSNLRDLEKGKQVFAFCFKVGF-VYNSIVSSAAIDLFSKCNRLEDAVRLFKEHEQW 310
Query: 720 DVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVF 541
+ NS+I + G+ L F P +T+S +++ + G Q+
Sbjct: 311 NSALCNSMISCYARHDLGEDALQLFVLTLRKNIMPTEYTVSCLLSSVTIFLPIEVGNQIH 370
Query: 540 SLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHG 361
+L +GF S+++V S+++ M++K +DD++ +F E+ D + N+++ G S +G
Sbjct: 371 ALVPKLGFESDTVVVSSLVDMYAKFGFIDDALNIFNEIKTKDLVTWNTIMMGLSYNGKVS 430
Query: 360 RAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLV-LKLGFEAYTIVASSL 184
+ LF +++E P + T + +L + + ++GI+I L+ ++ G + S +
Sbjct: 431 VTIDLFKELVREGTPPDQITFAAVLLACNYGNLVDEGIKIFSLMEMEFGIKPEEEHYSYV 490
Query: 183 VDMYSKAGLIESALKVFAKMGI-RDLVSWNTMIMGFARNG 67
V+M +AG ++ A+ + KM L W +++ A +G
Sbjct: 491 VEMLCRAGKLKEAIAIVKKMSYGTTLDIWRSILSACAVHG 530
>ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Solanum tuberosum]
Length = 644
Score = 424 bits (1090), Expect = e-116
Identities = 225/432 (52%), Positives = 298/432 (68%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
FYS LI H L +S +I+H +LIK+G +TFLGN LD YS+FG +A + F E+
Sbjct: 34 FYSRLIPHCLS---FSSLQILHGKLIKLGFNKNTFLGNCYLDLYSKFGTKIDAFKVFDEI 90
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
P KN+ +WN+ L L +SG V AR LFDEM E DVVSWNSMISGYA G +AL V
Sbjct: 91 PYKNAVSWNIWLKVLVQSGDVHCARQLFDEMPERDVVSWNSMISGYALYGLFENALGVFL 150
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+M ++PS +TYSIL+S V A K+IH ++R+G+ LSNVV+GN LI+MYG L +V
Sbjct: 151 EMQKYGIRPSGYTYSILVSHVEFAFHGKEIHGNMLRNGVDLSNVVVGNSLIDMYGKLGIV 210
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
DYA GVFL M VDVISWNSLI C KSGY D L F MR+ YSPD FT+S+V+ C
Sbjct: 211 DYATGVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACKYSPDEFTMSSVLIGC 270
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
NL++L KGKQ+ L V MGFL N+IVSSA I +FS C+ ++ S ++F++ + WD+ + N
Sbjct: 271 SNLRSLEKGKQILCLCVKMGFLCNAIVSSAAIDLFSNCNRIEYSARIFKDSNIWDTALCN 330
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
S+IS Y+ + A+QLF+L L++N+RPTEFTLS IL+ + F P + GIQ H LV+KL
Sbjct: 331 SMISSYALNSLEENALQLFVLTLRKNIRPTEFTLSCILSCTTTF-PVDLGIQAHSLVIKL 389
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
GF + +V++SLVDMY K GLI+SA +F + RDL+SWNTMI G A NG S ++L ++
Sbjct: 390 GFVSDPVVSTSLVDMYCKYGLIDSATNIFNDLLTRDLISWNTMIFGLAINGESTKSLSLY 449
Query: 39 ELLLKTGPWPDK 4
LL+ G PD+
Sbjct: 450 YELLELGGQPDR 461
Score = 85.5 bits (210), Expect = 8e-14
Identities = 68/308 (22%), Positives = 134/308 (43%), Gaps = 9/308 (2%)
Frame = -2
Query: 1302 FFYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYE 1123
F S+++ +++ L K I +K+G + + + +D +S ++ + + F
Sbjct: 261 FTMSSVLIGCSNLRSLEKGKQILCLCVKMGFLCNAIVSSAAIDLFSNCNRIEYSARIF-- 318
Query: 1122 MPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVV 943
K+S W+ L NSMIS YA N +AL++
Sbjct: 319 ---KDSNIWDTALC--------------------------NSMISSYALNSLEENALQLF 349
Query: 942 QQMLSVDVKPSAFTYSILMSCVSS--ALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGL 769
L +++P+ FT S ++SC ++ Q H +I+ G +S+ V+ L++MY
Sbjct: 350 VLTLRKNIRPTEFTLSCILSCTTTFPVDLGIQAHSLVIKLGF-VSDPVVSTSLVDMYCKY 408
Query: 768 RLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVI 589
L+D A +F + D+ISWN++I G +G L + + G PD T++ ++
Sbjct: 409 GLIDSATNIFNDLLTRDLISWNTMIFGLAINGESTKSLSLYYELLELGGQPDRITLTALL 468
Query: 588 TICCNLQALAKGKQVF-SLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEM----- 427
C + +G +F S+ G + ++GM ++ L ++ + + M
Sbjct: 469 LACSYGGFVDEGISIFSSMEEEYGITPGIEHYTCVVGMMTRAGKLKEAGDILQNMPHEPN 528
Query: 426 -HRWDSLI 406
W+S++
Sbjct: 529 SEMWESIL 536
>sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g43980,
mitochondrial; Flags: Precursor
gi|8778677|gb|AAF79685.1|AC022314_26 F9C16.15
[Arabidopsis thaliana]
Length = 633
Score = 397 bits (1020), Expect = e-108
Identities = 209/433 (48%), Positives = 290/433 (66%), Gaps = 1/433 (0%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
++S L++ SL K AKI+HAQL++ G T+ GNR L Y + G V NALQ F ++
Sbjct: 18 YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 77
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
PDKN+ TWNV L GLFK+GY+ A LFDEM E DVVSWN+MISG S GF + + V
Sbjct: 78 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 137
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
M +++P+ FT+SIL S V+ +QIH I SG+S N+V+ N +++MY L +
Sbjct: 138 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 197
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
DYA VFLTM DV+SWN LIL C SG ++ L QF MR PD +T+S V++IC
Sbjct: 198 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 257
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
+L+ L+KGKQ +L + MGFLSNSIV A I MFSKC+ LDDS+KLF E+ +WDS++ N
Sbjct: 258 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 317
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
S+I YS H A++LF+L + +++RP +FT S++L+S + V + G +H LV+KL
Sbjct: 318 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 376
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
GF+ T VA+SL++MY K G ++ A+ VFAK +DL+ WNT+IMG ARN R+VE+L +F
Sbjct: 377 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 436
Query: 39 -ELLLKTGPWPDK 4
+LL+ PD+
Sbjct: 437 NQLLMNQSLKPDR 449
Score = 105 bits (261), Expect = 1e-19
Identities = 97/391 (24%), Positives = 174/391 (44%), Gaps = 10/391 (2%)
Frame = -2
Query: 1266 VKCLNSAKIIHAQLIKVGLYNHTFL-GNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNV 1090
V C+ + IH I G+ + + N ++D Y R G D AL F M D+
Sbjct: 158 VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR------- 210
Query: 1089 LLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPS 910
DVVSWN +I + +G AL+ M ++++P
Sbjct: 211 ------------------------DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 246
Query: 909 AFTYSILMSCVSSALQ---AKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVF 739
+T S+++S S + KQ I+ G +++VLG G I+M+ +D + +F
Sbjct: 247 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG-IDMFSKCNRLDDSVKLF 305
Query: 738 LTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALA 559
+ D + NS+I G+ L F + PD FT S+V++ N L
Sbjct: 306 RELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLS-SMNAVMLD 364
Query: 558 KGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYS 379
G V SL + +GF ++ V+++++ M+ K +D ++ +F + D + N+VI G +
Sbjct: 365 HGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLA 424
Query: 378 RHGFHGRAMQLF-MLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL-----G 217
R+ ++ +F L++ ++L+P TL IL + +GIQI + K G
Sbjct: 425 RNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPG 484
Query: 216 FEAYTIVASSLVDMYSKAGLIESALKVFAKM 124
E Y + ++++ + G+I A + K+
Sbjct: 485 NEHY----ACIIELLCRVGMINEAKDIADKI 511
Score = 80.1 bits (196), Expect = 3e-12
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Frame = -2
Query: 1071 KSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSI 892
K ++ + LF E+ + D V NSMI Y+ + AL + ++ V+P FT+S
Sbjct: 294 KCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSS 353
Query: 891 LMSCVSSAL--QAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD 718
++S +++ + +H +I+ G L V L+ MY VD A GVF + D
Sbjct: 354 VLSSMNAVMLDHGADVHSLVIKLGFDLDTAV-ATSLMEMYFKTGSVDLAMGVFAKTDGKD 412
Query: 717 VISWNSLILGCDKSGYGDLGLVQFRSM-RSTGYSPDHFTISTVITICCNLQALAKGKQVF 541
+I WN++I+G ++ L F + + PD T+ ++ CC + +G Q+F
Sbjct: 413 LIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIF 472
Query: 540 -SLSVVMGFLSNSIVSSAII------GMFSKCDILDDSIKLFEEMHRWDSLISNSVISGY 382
S+ G + + II GM ++ + D I H W+ ++ S+ G
Sbjct: 473 SSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGD 532
Query: 381 SR 376
+R
Sbjct: 533 TR 534
>ref|NP_175064.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332193889|gb|AEE32010.1| pentatricopeptide
repeat-containing protein-like protein [Arabidopsis
thaliana]
Length = 621
Score = 397 bits (1020), Expect = e-108
Identities = 209/433 (48%), Positives = 290/433 (66%), Gaps = 1/433 (0%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
++S L++ SL K AKI+HAQL++ G T+ GNR L Y + G V NALQ F ++
Sbjct: 6 YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
PDKN+ TWNV L GLFK+GY+ A LFDEM E DVVSWN+MISG S GF + + V
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
M +++P+ FT+SIL S V+ +QIH I SG+S N+V+ N +++MY L +
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
DYA VFLTM DV+SWN LIL C SG ++ L QF MR PD +T+S V++IC
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
+L+ L+KGKQ +L + MGFLSNSIV A I MFSKC+ LDDS+KLF E+ +WDS++ N
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
S+I YS H A++LF+L + +++RP +FT S++L+S + V + G +H LV+KL
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKL 364
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
GF+ T VA+SL++MY K G ++ A+ VFAK +DL+ WNT+IMG ARN R+VE+L +F
Sbjct: 365 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 39 -ELLLKTGPWPDK 4
+LL+ PD+
Sbjct: 425 NQLLMNQSLKPDR 437
Score = 105 bits (261), Expect = 1e-19
Identities = 97/391 (24%), Positives = 174/391 (44%), Gaps = 10/391 (2%)
Frame = -2
Query: 1266 VKCLNSAKIIHAQLIKVGLYNHTFL-GNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNV 1090
V C+ + IH I G+ + + N ++D Y R G D AL F M D+
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR------- 198
Query: 1089 LLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPS 910
DVVSWN +I + +G AL+ M ++++P
Sbjct: 199 ------------------------DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 909 AFTYSILMSCVSSALQ---AKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVF 739
+T S+++S S + KQ I+ G +++VLG G I+M+ +D + +F
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG-IDMFSKCNRLDDSVKLF 293
Query: 738 LTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALA 559
+ D + NS+I G+ L F + PD FT S+V++ N L
Sbjct: 294 RELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLS-SMNAVMLD 352
Query: 558 KGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYS 379
G V SL + +GF ++ V+++++ M+ K +D ++ +F + D + N+VI G +
Sbjct: 353 HGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLA 412
Query: 378 RHGFHGRAMQLF-MLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL-----G 217
R+ ++ +F L++ ++L+P TL IL + +GIQI + K G
Sbjct: 413 RNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPG 472
Query: 216 FEAYTIVASSLVDMYSKAGLIESALKVFAKM 124
E Y + ++++ + G+I A + K+
Sbjct: 473 NEHY----ACIIELLCRVGMINEAKDIADKI 499
Score = 80.1 bits (196), Expect = 3e-12
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Frame = -2
Query: 1071 KSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSI 892
K ++ + LF E+ + D V NSMI Y+ + AL + ++ V+P FT+S
Sbjct: 282 KCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSS 341
Query: 891 LMSCVSSAL--QAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD 718
++S +++ + +H +I+ G L V L+ MY VD A GVF + D
Sbjct: 342 VLSSMNAVMLDHGADVHSLVIKLGFDLDTAV-ATSLMEMYFKTGSVDLAMGVFAKTDGKD 400
Query: 717 VISWNSLILGCDKSGYGDLGLVQFRSM-RSTGYSPDHFTISTVITICCNLQALAKGKQVF 541
+I WN++I+G ++ L F + + PD T+ ++ CC + +G Q+F
Sbjct: 401 LIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIF 460
Query: 540 -SLSVVMGFLSNSIVSSAII------GMFSKCDILDDSIKLFEEMHRWDSLISNSVISGY 382
S+ G + + II GM ++ + D I H W+ ++ S+ G
Sbjct: 461 SSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGD 520
Query: 381 SR 376
+R
Sbjct: 521 TR 522
>ref|XP_002520264.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540483|gb|EEF42050.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 524
Score = 397 bits (1020), Expect = e-108
Identities = 202/342 (59%), Positives = 257/342 (75%)
Frame = -2
Query: 1029 MAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQAKQI 850
M E DVVSWNSMISG+AS G+ AL + +M ++ V+PSAFTYSI++S V AL K++
Sbjct: 1 MPERDVVSWNSMISGFASYGYFDSALGIFGEMQNMGVRPSAFTYSIMVSIVFDALHGKEL 60
Query: 849 HCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGY 670
H +IRSG + NVVLGN LI+MYG VDYAFGVF TM VDVI+WNSLI+GC KSGY
Sbjct: 61 HGSMIRSGFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFTMEEVDVITWNSLIIGCCKSGY 120
Query: 669 GDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSA 490
G+L L QF MRS+GYSPD FT S VIT C NL+ L KGKQ+F+ + +GFLSN+IVSSA
Sbjct: 121 GELALHQFCLMRSSGYSPDEFTCSAVITSCSNLRNLDKGKQIFAFCLKVGFLSNTIVSSA 180
Query: 489 IIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKENLRPT 310
I +FSKC+ L+DS++LFEE+ + +S + NS+IS Y+ HGF A+QLF+L L+EN+RPT
Sbjct: 181 AIDLFSKCNRLEDSVQLFEELDQLNSALCNSMISSYAGHGFGENALQLFVLALRENIRPT 240
Query: 309 EFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIESALKVFA 130
EFT+S++L+ S F P EQG Q H V+KLGFE IVASSLV MY+K G I+ A+ +F
Sbjct: 241 EFTISSVLSFISIF-PPEQGTQFHSSVVKLGFELDAIVASSLVQMYTKFGFIDYAMDIFK 299
Query: 129 KMGIRDLVSWNTMIMGFARNGRSVEALEMFELLLKTGPWPDK 4
M +RDL+SWNTMIMG +NGR +EAL+ F+ LL GP PD+
Sbjct: 300 SMTVRDLISWNTMIMGLTQNGRVIEALDAFKKLLNRGPPPDR 341
Score = 111 bits (278), Expect = 1e-21
Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 74/347 (21%)
Frame = -2
Query: 1245 KIIHAQLIKVGLYN-HTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFK 1069
K +H +I+ G + LGN L+D Y +FG VD A F+ M + + TWN L+IG K
Sbjct: 58 KELHGSMIRSGFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFTMEEVDVITWNSLIIGCCK 117
Query: 1068 SGYVEKARHLFDEMA----EPDVVSWNSMIS---------------------GYASNGFV 964
SGY E A H F M PD + +++I+ G+ SN V
Sbjct: 118 SGYGELALHQFCLMRSSGYSPDEFTCSAVITSCSNLRNLDKGKQIFAFCLKVGFLSNTIV 177
Query: 963 GHA-----------------LEVVQQMLSV----------------------------DV 919
A E + Q+ S ++
Sbjct: 178 SSAAIDLFSKCNRLEDSVQLFEELDQLNSALCNSMISSYAGHGFGENALQLFVLALRENI 237
Query: 918 KPSAFTYSILMSCVS--SALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFG 745
+P+ FT S ++S +S Q Q H +++ G L + ++ + L+ MY +DYA
Sbjct: 238 RPTEFTISSVLSFISIFPPEQGTQFHSSVVKLGFEL-DAIVASSLVQMYTKFGFIDYAMD 296
Query: 744 VFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQA 565
+F +M V D+ISWN++I+G ++G L F+ + + G PD T++ V+ C
Sbjct: 297 IFKSMTVRDLISWNTMIMGLTQNGRVIEALDAFKKLLNRGPPPDRITLAGVLLACSYGGF 356
Query: 564 LAKGKQVF-SLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEM 427
+ +G +F S+ G + ++ ++I+ + + LD+++ + E M
Sbjct: 357 IEEGMTIFSSMQGSYGIIPSNEHYASIVNLLCQAGWLDEAMSMIEAM 403
>ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Capsella rubella]
gi|482572418|gb|EOA36605.1| hypothetical protein
CARUB_v10011813mg [Capsella rubella]
Length = 621
Score = 392 bits (1007), Expect = e-106
Identities = 203/424 (47%), Positives = 283/424 (66%)
Frame = -2
Query: 1299 FYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEM 1120
++S L+D SL K ++I+HAQ++KVG +T+ GNR L Y + G V +ALQ F ++
Sbjct: 6 YFSRLVDRSLLSKSPTLSRIVHAQIVKVGFIPNTYWGNRCLQLYFKSGSVVDALQLFDDI 65
Query: 1119 PDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQ 940
PDKN+ +WNV L GL K+GY A +FDEM E DVVSWN++ISG GF + + V
Sbjct: 66 PDKNTISWNVCLKGLLKNGYFNYALEVFDEMPERDVVSWNTVISGLDFCGFPEYGMRVFL 125
Query: 939 QMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
M S+ V+PS FT+SIL S VS +QIH I SG+S SN+V+ N +++MY L
Sbjct: 126 DMKSLVVRPSEFTFSILASLVSCVGHGEQIHGNAICSGVSKSNLVVWNSVMDMYRRLGFF 185
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
+YA VFLTM DVISWN LIL C SG ++ L Q M G PD +T+STV++IC
Sbjct: 186 EYALSVFLTMEERDVISWNCLILCCSDSGNKEVALDQVGLMMEMGNGPDEYTVSTVLSIC 245
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
+L+ L KGKQ +L + MGF NS+V A I MFSKC LDDS+KLF E+ +WDS++ N
Sbjct: 246 SDLRDLCKGKQAIALCIKMGFFGNSVVLGAAIDMFSKCKRLDDSVKLFRELEKWDSVLCN 305
Query: 399 SVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKL 220
S+I YS HGF A++LF++ +++ +RP +FT S++L+S + V + G Q+H LV+KL
Sbjct: 306 SMIGSYSWHGFGEDALRLFIVAMRQRIRPDKFTFSSVLSSMNA-VMLDHGAQVHSLVIKL 364
Query: 219 GFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF 40
G + T VA+SL++MY K GL++SA++VF +DL+ WNT+IMG ARN R+ E+L +F
Sbjct: 365 GCDQDTAVATSLMEMYFKTGLVDSAMRVFPTTDAKDLIFWNTVIMGLARNIRAAESLAVF 424
Query: 39 ELLL 28
LL
Sbjct: 425 NQLL 428
Score = 111 bits (278), Expect = 1e-21
Identities = 93/331 (28%), Positives = 160/331 (48%), Gaps = 9/331 (2%)
Frame = -2
Query: 1110 NSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQML 931
N WN ++ + G+ E A +F M E DV+SWN +I + +G AL+ V M+
Sbjct: 168 NLVVWNSVMDMYRRLGFFEYALSVFLTMEERDVISWNCLILCCSDSGNKEVALDQVGLMM 227
Query: 930 SVDVKPSAFTYSILMSCVSSA---LQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+ P +T S ++S S + KQ I+ G ++VVLG I+M+ + +
Sbjct: 228 EMGNGPDEYTVSTVLSICSDLRDLCKGKQAIALCIKMGFFGNSVVLG-AAIDMFSKCKRL 286
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
D + +F + D + NS+I G+G+ L F PD FT S+V++
Sbjct: 287 DDSVKLFRELEKWDSVLCNSMIGSYSWHGFGEDALRLFIVAMRQRIRPDKFTFSSVLS-S 345
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
N L G QV SL + +G ++ V+++++ M+ K ++D ++++F D + N
Sbjct: 346 MNAVMLDHGAQVHSLVIKLGCDQDTAVATSLMEMYFKTGLVDSAMRVFPTTDAKDLIFWN 405
Query: 399 SVISGYSRHGFHGRAMQLF-MLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLK 223
+VI G +R+ ++ +F L++ L+P TL IL + QGIQI + K
Sbjct: 406 TVIMGLARNIRAAESLAVFNQLLMNRVLKPDRVTLLGILVACCYAGFVNQGIQIFSSMEK 465
Query: 222 L-----GFEAYTIVASSLVDMYSKAGLIESA 145
G E Y +SL+++ +AG+I A
Sbjct: 466 THGVNPGNEHY----ASLIELLCRAGMINEA 492
Score = 105 bits (262), Expect = 7e-20
Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 1/271 (0%)
Frame = -2
Query: 813 NVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMR 634
NV L L N Y +YA VF M DV+SWN++I G D G+ + G+ F M+
Sbjct: 74 NVCLKGLLKNGY-----FNYALEVFDEMPERDVVSWNTVISGLDFCGFPEYGMRVFLDMK 128
Query: 633 STGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFL-SNSIVSSAIIGMFSKCDIL 457
S P FT S + ++ + + G+Q+ ++ G SN +V ++++ M+ +
Sbjct: 129 SLVVRPSEFTFSILASL---VSCVGHGEQIHGNAICSGVSKSNLVVWNSVMDMYRRLGFF 185
Query: 456 DDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSA 277
+ ++ +F M D + N +I S G A+ L+++ P E+T+S +L+
Sbjct: 186 EYALSVFLTMEERDVISWNCLILCCSDSGNKEVALDQVGLMMEMGNGPDEYTVSTVLSIC 245
Query: 276 SCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWN 97
S +G Q L +K+GF ++V + +DM+SK ++ ++K+F ++ D V N
Sbjct: 246 SDLRDLCKGKQAIALCIKMGFFGNSVVLGAAIDMFSKCKRLDDSVKLFRELEKWDSVLCN 305
Query: 96 TMIMGFARNGRSVEALEMFELLLKTGPWPDK 4
+MI ++ +G +AL +F + ++ PDK
Sbjct: 306 SMIGSYSWHGFGEDALRLFIVAMRQRIRPDK 336
>ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 528
Score = 391 bits (1004), Expect = e-106
Identities = 196/337 (58%), Positives = 254/337 (75%)
Frame = -2
Query: 1029 MAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQAKQI 850
M E DVVSWNSMISGY S G VG+A+ + +M S V+PS FT+SI+MS VSS K+I
Sbjct: 1 MPERDVVSWNSMISGYVSCGLVGNAMWMFSEMQSSGVRPSEFTFSIVMSVVSSGCHGKEI 60
Query: 849 HCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGY 670
H +IR G++LSNVV+GN LI+MYG + VDYAFGVF+ M +DVISWNSLI GC ++GY
Sbjct: 61 HGGMIRKGVNLSNVVVGNSLIHMYGKIGSVDYAFGVFMCMEELDVISWNSLIWGCHRAGY 120
Query: 669 GDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSA 490
+L + QF MR T +SPD FTISTVI +CCNL LA+GKQ+ + S+ +GF SNSIVSSA
Sbjct: 121 EELAIDQFVLMRGTEHSPDEFTISTVINVCCNLLDLARGKQIIAFSLKVGFFSNSIVSSA 180
Query: 489 IIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKENLRPT 310
I MFSKC+ L+D++ LF+E+ DS + NS+IS Y+RHG A+ LF+L L++NLRPT
Sbjct: 181 AIDMFSKCNRLEDAVLLFQELSWSDSAVCNSMISSYARHGCVDNAVLLFVLTLRKNLRPT 240
Query: 309 EFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIESALKVFA 130
EFTLS++L+ S F+P EQG QIH V+KLGFE+ IVASSLVD Y+K GLI A+K+F+
Sbjct: 241 EFTLSSVLSCTSTFLPVEQGFQIHSWVIKLGFESDAIVASSLVDFYTKLGLINHAMKIFS 300
Query: 129 KMGIRDLVSWNTMIMGFARNGRSVEALEMFELLLKTG 19
M ++DL+SWNTMIMG A+NG+ E L+ F+ L+ G
Sbjct: 301 SMAVKDLISWNTMIMGLAQNGKLFETLDTFKELVSEG 337
Score = 108 bits (271), Expect = 7e-21
Identities = 92/416 (22%), Positives = 190/416 (45%), Gaps = 6/416 (1%)
Frame = -2
Query: 1245 KIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFK 1069
K IH +I+ G+ ++ +GN L+ Y + G VD A G+F
Sbjct: 58 KEIHGGMIRKGVNLSNVVVGNSLIHMYGKIGSVDYAF-------------------GVFM 98
Query: 1068 SGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSIL 889
M E DV+SWNS+I G G+ A++ M + P FT S +
Sbjct: 99 C------------MEELDVISWNSLIWGCHRAGYEELAIDQFVLMRGTEHSPDEFTISTV 146
Query: 888 MSCVSSAL---QAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD 718
++ + L + KQI ++ G SN ++ + I+M+ ++ A +F ++ D
Sbjct: 147 INVCCNLLDLARGKQIIAFSLKVGF-FSNSIVSSAAIDMFSKCNRLEDAVLLFQELSWSD 205
Query: 717 VISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFS 538
NS+I + G D ++ F P FT+S+V++ + +G Q+ S
Sbjct: 206 SAVCNSMISSYARHGCVDNAVLLFVLTLRKNLRPTEFTLSSVLSCTSTFLPVEQGFQIHS 265
Query: 537 LSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGR 358
+ +GF S++IV+S+++ ++K +++ ++K+F M D + N++I G +++G
Sbjct: 266 WVIKLGFESDAIVASSLVDFYTKLGLINHAMKIFSSMAVKDLISWNTMIMGLAQNGKLFE 325
Query: 357 AMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIH-PLVLKLGFEAYTIVASSLV 181
+ F ++ E + + TL+ +L + + ++G+ + + + G + +V
Sbjct: 326 TLDTFKELVSEGMPADDVTLAGVLLACNFGSFVDEGMSLFISMEKEYGIKPAEEHYMCIV 385
Query: 180 DMYSKAGLIESALKVFAKMGIR-DLVSWNTMIMGFARNGRSVEALEMFELLLKTGP 16
D+ ++AG +E+A+ + M + W +++ A + +L++K+ P
Sbjct: 386 DLLTRAGKLEAAMDIVEAMPYEPSSMIWESILRACALQKDIKITERVAQLMMKSEP 441
Score = 76.6 bits (187), Expect = 4e-11
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Frame = -2
Query: 402 NSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILT--SASCFVPAEQGIQIHPLV 229
NS+ISGY G G AM +F + +RP+EFT S +++ S+ C G +IH +
Sbjct: 10 NSMISGYVSCGLVGNAMWMFSEMQSSGVRPSEFTFSIVMSVVSSGC-----HGKEIHGGM 64
Query: 228 LKLGFE-AYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEA 52
++ G + +V +SL+ MY K G ++ A VF M D++SWN++I G R G A
Sbjct: 65 IRKGVNLSNVVVGNSLIHMYGKIGSVDYAFGVFMCMEELDVISWNSLIWGCHRAGYEELA 124
Query: 51 LEMFELLLKTGPWPDK 4
++ F L+ T PD+
Sbjct: 125 IDQFVLMRGTEHSPDE 140
>ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutrema salsugineum]
gi|557090330|gb|ESQ31038.1| hypothetical protein
EUTSA_v10011320mg [Eutrema salsugineum]
Length = 624
Score = 390 bits (1003), Expect = e-106
Identities = 204/432 (47%), Positives = 292/432 (67%), Gaps = 1/432 (0%)
Frame = -2
Query: 1296 YSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYEMP 1117
Y + +D SL KC A+I+HAQL+KVGL +T+ GNR L Y + G V +A + F ++
Sbjct: 6 YFSRVDRSLLSKCPTLARIVHAQLVKVGLIPNTYWGNRCLQLYFKSGAVIDAFRLFDDIL 65
Query: 1116 DKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQ 937
DKN+ TWN+ L GL ++GY+ A +FDEM E DVVS+N+MISG S G + +A+ + +
Sbjct: 66 DKNTITWNICLKGLLRNGYINHALDVFDEMPERDVVSFNTMISGLGSCGLMENAIRIHLE 125
Query: 936 MLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVD 757
M + P+ FT+SIL S VS +QIH +I SGLSLSN+V+ N L++MY L ++D
Sbjct: 126 MQRCMIGPTEFTFSILASLVSCVRHGEQIHGNVICSGLSLSNLVVWNSLMDMYRRLGVID 185
Query: 756 YAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICC 577
YA VF M DVISWNSLI C G ++ L F MR G PD +T+STV+++C
Sbjct: 186 YALSVFSIMEDRDVISWNSLISCCSDYGKKEVALDLFCLMREMGNQPDAYTVSTVLSVCS 245
Query: 576 NLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNS 397
L+ L KGK+ +L + MGFLSN+IVS A I MFSKC+ L+DS+KLF E+ +WDS++ NS
Sbjct: 246 GLRDLCKGKKAIALCIKMGFLSNTIVSGAAIDMFSKCNRLEDSVKLFRELEKWDSVLCNS 305
Query: 396 VISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLG 217
++ YS HGF A++LF+L +++++RP +FT S++L+S + V +QG Q+H L +KLG
Sbjct: 306 LVGSYSWHGFGEDALRLFILAMRQSVRPDKFTFSSVLSSMN-VVMLDQGAQVHSLAIKLG 364
Query: 216 FEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEMF- 40
FE T VA+SL++MY K GL++SA+ +FA +DL WNT+IMG ARN + E+L +F
Sbjct: 365 FEQDTAVATSLMEMYFKTGLVDSAMGMFATTDEKDLFFWNTVIMGLARNNLAAESLAIFH 424
Query: 39 ELLLKTGPWPDK 4
+LL+ PD+
Sbjct: 425 QLLIDRALKPDR 436
Score = 122 bits (305), Expect = 8e-25
Identities = 88/334 (26%), Positives = 163/334 (48%), Gaps = 5/334 (1%)
Frame = -2
Query: 1110 NSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQML 931
N WN L+ + G ++ A +F M + DV+SWNS+IS + G AL++ M
Sbjct: 167 NLVVWNSLMDMYRRLGVIDYALSVFSIMEDRDVISWNSLISCCSDYGKKEVALDLFCLMR 226
Query: 930 SVDVKPSAFTYSILMSCVSSA---LQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLV 760
+ +P A+T S ++S S + K+ I+ G LSN ++ I+M+ +
Sbjct: 227 EMGNQPDAYTVSTVLSVCSGLRDLCKGKKAIALCIKMGF-LSNTIVSGAAIDMFSKCNRL 285
Query: 759 DYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITIC 580
+ + +F + D + NSL+ G+G+ L F PD FT S+V++
Sbjct: 286 EDSVKLFRELEKWDSVLCNSLVGSYSWHGFGEDALRLFILAMRQSVRPDKFTFSSVLS-S 344
Query: 579 CNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISN 400
N+ L +G QV SL++ +GF ++ V+++++ M+ K ++D ++ +F D N
Sbjct: 345 MNVVMLDQGAQVHSLAIKLGFEQDTAVATSLMEMYFKTGLVDSAMGMFATTDEKDLFFWN 404
Query: 399 SVISGYSRHGFHGRAMQLF-MLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLK 223
+VI G +R+ ++ +F L++ L+P TL +L + +GIQI + K
Sbjct: 405 TVIMGLARNNLAAESLAIFHQLLIDRALKPDRVTLMGVLVACCYAGFVNEGIQIFSSIGK 464
Query: 222 -LGFEAYTIVASSLVDMYSKAGLIESALKVFAKM 124
G + ++++ +AG+I A+ + KM
Sbjct: 465 TYGVNPCNEHYACIIELLCRAGMINEAIDIAKKM 498
Score = 92.0 bits (227), Expect = 8e-16
Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 10/242 (4%)
Frame = -2
Query: 1071 KSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSI 892
K +E + LF E+ + D V NS++ Y+ +GF AL + + V+P FT+S
Sbjct: 281 KCNRLEDSVKLFRELEKWDSVLCNSLVGSYSWHGFGEDALRLFILAMRQSVRPDKFTFSS 340
Query: 891 LMSCVSSAL--QAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD 718
++S ++ + Q Q+H I+ G V L+ MY LVD A G+F T + D
Sbjct: 341 VLSSMNVVMLDQGAQVHSLAIKLGFEQDTAV-ATSLMEMYFKTGLVDSAMGMFATTDEKD 399
Query: 717 VISWNSLILGCDKSGYGDLGLVQFRSMR-STGYSPDHFTISTVITICCNLQALAKGKQVF 541
+ WN++I+G ++ L F + PD T+ V+ CC + +G Q+F
Sbjct: 400 LFFWNTVIMGLARNNLAAESLAIFHQLLIDRALKPDRVTLMGVLVACCYAGFVNEGIQIF 459
Query: 540 -SLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEM------HRWDSLISNSVISGY 382
S+ G + + II + + +++++I + ++M H W+ +I S+ GY
Sbjct: 460 SSIGKTYGVNPCNEHYACIIELLCRAGMINEAIDIAKKMPFEPSSHIWEPIICASLDLGY 519
Query: 381 SR 376
+R
Sbjct: 520 TR 521
>ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata]
gi|297339814|gb|EFH70231.1| F9C16.15 [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 387 bits (993), Expect = e-104
Identities = 204/435 (46%), Positives = 286/435 (65%), Gaps = 2/435 (0%)
Frame = -2
Query: 1302 FFYSNLIDHSLHVKCLNSAKIIHAQLIKVGLYNHTFLGNRLLDFYSRFGDVDNALQFFYE 1123
F++S L+D L KC +I+HAQL+K G T+ GNR L Y + G V +A + F +
Sbjct: 5 FYFSRLVDRYLLSKCPTLTRIVHAQLLKAGFIRTTYWGNRCLQLYFKSGAVIDAFRLFDD 64
Query: 1122 MPDKNSYTWNVLLIGLFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVV 943
+PDKN+ +WNV L GLFK+G++ A LFDEM E DVVSWN+MISG+ S GF +A+ V
Sbjct: 65 IPDKNTISWNVCLKGLFKNGFLNNALDLFDEMPERDVVSWNTMISGFVSCGFPEYAIRVF 124
Query: 942 QQMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRL 763
M ++P+ FT+SIL S VS +QIH I SG+S SN+V+ N L++MY + +
Sbjct: 125 FDMQRWVIRPTEFTFSILASLVSCVRHGEQIHGNAICSGVSKSNLVVWNSLMDMYRRIGV 184
Query: 762 VDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITI 583
DYA VFLTM DVISWN LIL C SG ++ L QF MR PD +T+S V++I
Sbjct: 185 FDYAISVFLTMEERDVISWNCLILCCSDSGNKEVALDQFWLMREMENKPDEYTVSMVVSI 244
Query: 582 CCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLIS 403
C +LQ L KGKQ +L + MGFL N+IV + I MFSKC+ LDDS+KLF ++ +WDS++
Sbjct: 245 CSDLQDLCKGKQAIALCIKMGFLFNNIVLGSGIDMFSKCNRLDDSVKLFRQLEKWDSVLC 304
Query: 402 NSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLK 223
NS+I YS H + LF++ +++++ P +FT S++L+S + V G Q+H L K
Sbjct: 305 NSMIGSYSWHCCGEDTLTLFIVAMRQSISPDKFTFSSVLSSMNA-VMLGHGAQVHALATK 363
Query: 222 LGFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWNTMIMGFARNGRSVEALEM 43
LGF++ T VA+SL++MY K G ++SA+ VFA +DL+ WNT+IMG ARN R+VE+L +
Sbjct: 364 LGFDSDTTVATSLMEMYFKTGSVDSAMGVFAITDEKDLIFWNTVIMGLARNSRAVESLSV 423
Query: 42 FELLL--KTGPWPDK 4
F LL + G PD+
Sbjct: 424 FNQLLMDERGLKPDR 438
Score = 75.9 bits (185), Expect = 6e-11
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 16/262 (6%)
Frame = -2
Query: 1113 KNSYTWNVLLIG-----LFKSGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALE 949
K + +N +++G K ++ + LF ++ + D V NSMI Y+ + L
Sbjct: 263 KMGFLFNNIVLGSGIDMFSKCNRLDDSVKLFRQLEKWDSVLCNSMIGSYSWHCCGEDTLT 322
Query: 948 VVQQMLSVDVKPSAFTYSILMSCVSSAL--QAKQIHCCIIRSGLSLSNVVLGNGLINMYG 775
+ + + P FT+S ++S +++ + Q+H + G S+ + L+ MY
Sbjct: 323 LFIVAMRQSISPDKFTFSSVLSSMNAVMLGHGAQVHALATKLGFD-SDTTVATSLMEMYF 381
Query: 774 GLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRS--MRSTGYSPDHFTI 601
VD A GVF + D+I WN++I+G ++ L F M G PD T
Sbjct: 382 KTGSVDSAMGVFAITDEKDLIFWNTVIMGLARNSRAVESLSVFNQLLMDERGLKPDRVTF 441
Query: 600 STVITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAII-------GMFSKCDILDDSIK 442
++ CC + KG Q+FS + A I GM ++ + D I
Sbjct: 442 MGILVACCYAGFVNKGIQIFSSMEKTHDVDPGNEHYACIIELLCRAGMINEAKDIADKIP 501
Query: 441 LFEEMHRWDSLISNSVISGYSR 376
H W+ ++ SV G +R
Sbjct: 502 FEPSSHIWEPILCASVDVGDTR 523
>ref|XP_006434328.1| hypothetical protein CICLE_v10000854mg [Citrus clementina]
gi|557536450|gb|ESR47568.1| hypothetical protein
CICLE_v10000854mg [Citrus clementina]
Length = 523
Score = 371 bits (952), Expect = e-100
Identities = 190/331 (57%), Positives = 249/331 (75%)
Frame = -2
Query: 996 MISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSILMSCVSSALQAKQIHCCIIRSGLSL 817
MISGYAS G+ +ALE+ +M V+PS FT++IL+S VSS+ KQIH +IRSGLSL
Sbjct: 1 MISGYASCGYSDYALEMFSKMQLQGVRPSGFTFTILLSTVSSSCHGKQIHGSMIRSGLSL 60
Query: 816 SNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVDVISWNSLILGCDKSGYGDLGLVQFRSM 637
SNVVLGN LI+MYG L ++ YAFGVFL M +D+ISWNSLI GC SGYG+L L QF SM
Sbjct: 61 SNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSM 120
Query: 636 RSTGYSPDHFTISTVITICCNLQALAKGKQVFSLSVVMGFLSNSIVSSAIIGMFSKCDIL 457
R +GYSPD +TIS VI C L+ L KGKQVF+LSV +GFLSNSIV SA I +FSKC+ L
Sbjct: 121 RYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRL 180
Query: 456 DDSIKLFEEMHRWDSLISNSVISGYSRHGFHGRAMQLFMLILKENLRPTEFTLSNILTSA 277
+DS++LFE++ RWDS + N VIS Y R+GF A++LF L+L+E++RPTEFTLS +L+S
Sbjct: 181 EDSVRLFEQLDRWDSAVINVVISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI 240
Query: 276 SCFVPAEQGIQIHPLVLKLGFEAYTIVASSLVDMYSKAGLIESALKVFAKMGIRDLVSWN 97
P E G Q H + +K GF++ +VASSL++MY+K G I+S+ ++F K+ RDLVSWN
Sbjct: 241 P-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWN 299
Query: 96 TMIMGFARNGRSVEALEMFELLLKTGPWPDK 4
T++MG +NGR+ E L++FE LL+ G PD+
Sbjct: 300 TIMMGLTQNGRAAETLDVFEELLEEGLPPDR 330
Score = 116 bits (291), Expect = 3e-23
Identities = 95/403 (23%), Positives = 191/403 (47%), Gaps = 10/403 (2%)
Frame = -2
Query: 1245 KIIHAQLIKVGL-YNHTFLGNRLLDFYSRFGDVDNALQFFYEMPDKNSYTWNVLLIGLFK 1069
K IH +I+ GL ++ LGN L+D Y + G + A F M + + +WN L+ G F
Sbjct: 47 KQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFN 106
Query: 1068 SGYVEKARHLFDEMAEPDVVSWNSMISGYASNGFVGHALEVVQQMLSVDVKPSAFTYSIL 889
SGY E A F ++ SGY+ P +T SI+
Sbjct: 107 SGYGELALDQF----------YSMRYSGYS---------------------PDEYTISIV 135
Query: 888 MSCVSSAL---QAKQIHCCIIRSGLSLSNVVLGNGLINMYGGLRLVDYAFGVFLTMNVVD 718
++ + + KQ+ ++ G LSN ++ + I+++ ++ + +F ++ D
Sbjct: 136 INACTKLRNLDKGKQVFALSVKVGF-LSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWD 194
Query: 717 VISWNSLILGCDKSGYGDLGLVQFRSMRSTGYSPDHFTISTVITICCNLQALAKGKQVFS 538
N +I + G+G++ L F+ M P FT+S V++ + + G Q S
Sbjct: 195 SAVINVVISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLS-SIPIPPVEHGSQFHS 253
Query: 537 LSVVMGFLSNSIVSSAIIGMFSKCDILDDSIKLFEEMHRWDSLISNSVISGYSRHGFHGR 358
+++ GF SN++V+S+++ M++K +D S ++F ++ + D + N+++ G +++G
Sbjct: 254 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAE 313
Query: 357 AMQLFMLILKENLRPTEFTLSNILTSASCFVPAEQGIQIHPLVLKLGFEAYTIVA----- 193
+ +F +L+E L P TL+ +L + + ++G+ LV E Y ++
Sbjct: 314 TLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGM----LVFSAMKEEYGVMPGEEHY 369
Query: 192 SSLVDMYSKAGLIESALKVFAKMGIRDLVS-WNTMIMGFARNG 67
+ ++D+ +AG + A+ + + M + S W +++ A G
Sbjct: 370 ACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYG 412