BLASTX nr result
ID: Cocculus23_contig00009911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00009911
(1225 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 164 7e-38
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 155 3e-35
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 155 3e-35
ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citr... 143 2e-31
ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citr... 143 2e-31
ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa ... 141 5e-31
ref|XP_002525676.1| transcription initiation factor brf1, putati... 141 5e-31
ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa ... 135 4e-29
ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa ... 134 8e-29
ref|XP_007029946.1| Cyclin/Brf1-like TBP-binding protein, putati... 130 9e-28
ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citr... 125 3e-26
ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Popu... 122 4e-25
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ... 113 1e-22
ref|XP_006598955.1| PREDICTED: transcription factor IIIB 90 kDa ... 110 1e-21
ref|XP_006604271.1| PREDICTED: transcription factor IIIB 90 kDa ... 110 2e-21
ref|XP_006604269.1| PREDICTED: transcription factor IIIB 90 kDa ... 110 2e-21
ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Popu... 108 5e-21
ref|XP_006604270.1| PREDICTED: transcription factor IIIB 90 kDa ... 105 4e-20
ref|XP_007029948.1| Cyclin/Brf1-like TBP-binding protein, putati... 93 2e-16
ref|XP_007029947.1| Cyclin/Brf1-like TBP-binding protein, putati... 93 2e-16
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 164 bits (415), Expect = 7e-38
Identities = 103/242 (42%), Positives = 133/242 (54%), Gaps = 1/242 (0%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GGSEPPAFQRAE++R+A+ + EE+ + + +L + DV NE+ + + IG
Sbjct: 333 GGSEPPAFQRAERDRMAKAAAEENADS----NQIQLDKGSSSPDVCGNESSKLAEPKSIG 388
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
A+D +DE A + G D + A DESE+LSDIDDVEV GYLHNE+EK++KKIIWE
Sbjct: 389 ASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEA 448
Query: 865 MNKXXXXXXXXXXXXXXXXXXXXXANF-EHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 689
MNK A+F ++
Sbjct: 449 MNKEYLEEQAAKEAAAAAAKEAYEASFKDNPEGLKAAQELAAATAAAVAKSRKERQQKRA 508
Query: 688 XXXXXAIPAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRVDSDSGDDT 509
+PAQTAAEATRQ+LTKKRLSSKINYDVLEKLFDDS EN KK R +S + ++
Sbjct: 509 AEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDDSVPSENPKKIRTESQTENND 568
Query: 508 SK 503
K
Sbjct: 569 HK 570
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 155 bits (392), Expect = 3e-35
Identities = 104/268 (38%), Positives = 133/268 (49%), Gaps = 14/268 (5%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERI- 1049
GGS PPAFQ AEKER+ + + EE ++ + K N +++N+ SE
Sbjct: 366 GGSNPPAFQSAEKERMEKATVEEGSDDCSAIGKFSQGLKPCNNTEKESDNVHVDASETAS 425
Query: 1048 -------GAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKR 890
G AD + D++ N G D + A+D+SE SDIDDVEV GYLHNEEEK
Sbjct: 426 FKEAEAKGTADEQRGPDDDVNK--VGADDLGTCASDDSENWSDIDDVEVDGYLHNEEEKH 483
Query: 889 YKKIIWEEMNKXXXXXXXXXXXXXXXXXXXXXANFEHCS-XXXXXXXXXXXXXXXXXXXX 713
YKKIIWEEMN+ ANF++CS
Sbjct: 484 YKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSR 543
Query: 712 XXXXXXXXXXXXXAIPAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRV 533
A PAQTAAEATRQ+L KKRLSSKINYDVL+KLFD+S E S KK+
Sbjct: 544 KERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAKKKC 603
Query: 532 DSDSGD-----DTSKQLHGRVNQELDTD 464
+ + + +T+K+ QE D D
Sbjct: 604 EEQAEETEKTRNTTKEFETTEEQEEDYD 631
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 155 bits (392), Expect = 3e-35
Identities = 104/268 (38%), Positives = 133/268 (49%), Gaps = 14/268 (5%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERI- 1049
GGS PPAFQ AEKER+ + + EE ++ + K N +++N+ SE
Sbjct: 366 GGSNPPAFQSAEKERMEKATVEEGSDDCSAIGKFSQGLKPCNNTEKESDNVHVDASETAS 425
Query: 1048 -------GAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKR 890
G AD + D++ N G D + A+D+SE SDIDDVEV GYLHNEEEK
Sbjct: 426 FKEAEAKGTADEQRGPDDDVNK--VGADDLGTCASDDSENWSDIDDVEVDGYLHNEEEKH 483
Query: 889 YKKIIWEEMNKXXXXXXXXXXXXXXXXXXXXXANFEHCS-XXXXXXXXXXXXXXXXXXXX 713
YKKIIWEEMN+ ANF++CS
Sbjct: 484 YKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSR 543
Query: 712 XXXXXXXXXXXXXAIPAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRV 533
A PAQTAAEATRQ+L KKRLSSKINYDVL+KLFD+S E S KK+
Sbjct: 544 KERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAKKKC 603
Query: 532 DSDSGD-----DTSKQLHGRVNQELDTD 464
+ + + +T+K+ QE D D
Sbjct: 604 EEQAEETEKTRNTTKEFETTEEQEEDYD 631
>ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|568851023|ref|XP_006479194.1| PREDICTED: transcription
factor IIIB 90 kDa subunit-like isoform X1 [Citrus
sinensis] gi|557545784|gb|ESR56762.1| hypothetical
protein CICLE_v10019321mg [Citrus clementina]
Length = 620
Score = 143 bits (360), Expect = 2e-31
Identities = 100/252 (39%), Positives = 125/252 (49%), Gaps = 2/252 (0%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINK-DVSQNENLESRCSERI 1049
GG++PPAFQ AE+ER+ + S EE+ + E SP +++ D Q+ ES +
Sbjct: 331 GGADPPAFQVAERERMVKASAEENSSF-----ERESDSPFMSRVDKVQSPEPESIGVPKN 385
Query: 1048 GAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWE 869
T E +T+ G D A+ D S+ SDIDD EV GYLHNEEEK YKKIIWE
Sbjct: 386 CTTQTASNEGEGDHTKTPGVDATTEAS-DGSDNFSDIDDFEVDGYLHNEEEKHYKKIIWE 444
Query: 868 EMNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 689
EMN+ A++++C
Sbjct: 445 EMNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRKEKQQKR 504
Query: 688 XXXXXAI-PAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRVDSDSGDD 512
PAQTA EATR++LTKKRLSSKINYDVLEKLFDDS EN KKKR DS S D
Sbjct: 505 AAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSENPKKKRTDSHSDYD 564
Query: 511 TSKQLHGRVNQE 476
+G+ E
Sbjct: 565 DKFPNNGKKEHE 576
>ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|567902066|ref|XP_006443521.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545782|gb|ESR56760.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545783|gb|ESR56761.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 543
Score = 143 bits (360), Expect = 2e-31
Identities = 100/252 (39%), Positives = 125/252 (49%), Gaps = 2/252 (0%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINK-DVSQNENLESRCSERI 1049
GG++PPAFQ AE+ER+ + S EE+ + E SP +++ D Q+ ES +
Sbjct: 254 GGADPPAFQVAERERMVKASAEENSSF-----ERESDSPFMSRVDKVQSPEPESIGVPKN 308
Query: 1048 GAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWE 869
T E +T+ G D A+ D S+ SDIDD EV GYLHNEEEK YKKIIWE
Sbjct: 309 CTTQTASNEGEGDHTKTPGVDATTEAS-DGSDNFSDIDDFEVDGYLHNEEEKHYKKIIWE 367
Query: 868 EMNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 689
EMN+ A++++C
Sbjct: 368 EMNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRKEKQQKR 427
Query: 688 XXXXXAI-PAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRVDSDSGDD 512
PAQTA EATR++LTKKRLSSKINYDVLEKLFDDS EN KKKR DS S D
Sbjct: 428 AAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSENPKKKRTDSHSDYD 487
Query: 511 TSKQLHGRVNQE 476
+G+ E
Sbjct: 488 DKFPNNGKKEHE 499
>ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Citrus sinensis]
Length = 618
Score = 141 bits (356), Expect = 5e-31
Identities = 98/251 (39%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GG++PPAFQ AE+ER+ + S EE+ + E SP +++ V + ++ E +
Sbjct: 331 GGADPPAFQVAERERMVKASAEENSSF-----ERESDSPFMSR-VDKVQSPEPERVPKNC 384
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
T E +T+ G D A+ D S+ SDIDD EV GYLHNEEEK YKKIIWEE
Sbjct: 385 TTQTASNEGEGDHTKTPGVDATTEAS-DGSDNFSDIDDFEVDGYLHNEEEKHYKKIIWEE 443
Query: 865 MNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
MN+ A++++C
Sbjct: 444 MNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRKEKQQKRA 503
Query: 685 XXXXAI-PAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRVDSDSGDDT 509
PAQTA EATR++LTKKRLSSKINYDVLEKLFDDS EN KKKR DS S D
Sbjct: 504 AEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSENPKKKRTDSHSDYDD 563
Query: 508 SKQLHGRVNQE 476
+G+ E
Sbjct: 564 KFPNNGKKEHE 574
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 141 bits (356), Expect = 5e-31
Identities = 96/247 (38%), Positives = 127/247 (51%), Gaps = 9/247 (3%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREE------LCQLRKEELPSPKINKDVSQNENLESR 1064
GGS+PPAFQ+AE+ R +S + + + L ++EL S ++D E L S+
Sbjct: 326 GGSDPPAFQQAERRRKENLSAMNNNNDSNSVSTMPFLFEKELNSQHADRD----EQLLSK 381
Query: 1063 CSERIGAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYK 884
+E G A H D+ ++ DD M + A DES+ SDIDD EV GYLHNEEE ++K
Sbjct: 382 KAESTGEAALHLPADDGGYSKLHDDDDMSSKALDESDNFSDIDDAEVDGYLHNEEEAQFK 441
Query: 883 KIIWEEMNKXXXXXXXXXXXXXXXXXXXXXANFEHC-SXXXXXXXXXXXXXXXXXXXXXX 707
KIIWEEMN+ A F+ C
Sbjct: 442 KIIWEEMNREYLEEQAAKEAVAAAAKEAWEAKFKDCPEEMQAARELEAAVAAALAKSKKE 501
Query: 706 XXXXXXXXXXXAIPAQTAAEATRQILTKKRLSSKINYDVLEKLFDD--SEDPENSKKKRV 533
++PAQ+A+EA RQ+LTKKRLSSKINYDVLEKLFD+ S+DP KK R
Sbjct: 502 KQQKRAAEAKNSVPAQSASEAARQMLTKKRLSSKINYDVLEKLFDEPGSKDP---KKLRT 558
Query: 532 DSDSGDD 512
+S+S D
Sbjct: 559 ESESDTD 565
>ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
lycopersicum]
Length = 615
Score = 135 bits (340), Expect = 4e-29
Identities = 101/263 (38%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERV-ARMSQEESREE-----LCQLRKE--ELPSPKINKDVSQNENLE 1070
GGSEPP+FQRAE+ER+ A+ EE E+ Q+ E P+ + +N+
Sbjct: 332 GGSEPPSFQRAERERLMAKQDAEEIAEDPSFPMSSQMENNVGEYLEPEKEGNTQSVKNVH 391
Query: 1069 SRCSERIGAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKR 890
SE++GA + D A D MD DES SDIDDVEV YLHNE+EK+
Sbjct: 392 ISGSEQVGAFSA-VKTDHVATPDTLHD--MDGIDHDESGNFSDIDDVEVDSYLHNEQEKK 448
Query: 889 YKKIIWEEMNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXX 710
YKKIIWE MN+ +C
Sbjct: 449 YKKIIWETMNREYLEEQAAKEAAVLEAKKQHEFILANCPEDVQKFAAATAASVAKSKKEK 508
Query: 709 XXXXXXXXXXXXAIPAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRVD 530
PAQTAAEAT+Q+L KKRLS+KINYDVLEKLFDDS PEN KK R
Sbjct: 509 QQKRAAELKNTG--PAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDSA-PENPKKARTA 565
Query: 529 SDSGDDTSKQLHGRVNQELDTDV 461
DS DD +G + ++D +V
Sbjct: 566 YDSTDD-----YGVKSDKIDPEV 583
>ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 615
Score = 134 bits (337), Expect = 8e-29
Identities = 99/263 (37%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERV-ARMSQEESREELCQLRKEELPS-------PKINKDVSQNENLE 1070
GGSEPP+FQRAE+ER+ A+ EE E+ ++ + P+ + +N+
Sbjct: 332 GGSEPPSFQRAERERLMAKQDAEEIAEDPSFPMSSQMVNNVGEYLEPEKEGNTQSVKNVH 391
Query: 1069 SRCSERIGAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKR 890
SE++GA + D A P MD DES SDIDDVEV YLHNE+EK+
Sbjct: 392 ISGSEQVGAFSV-DKTDHIAT--PDTSHAMDGIDHDESGNFSDIDDVEVDSYLHNEQEKK 448
Query: 889 YKKIIWEEMNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXX 710
YKKIIWE MN+ +C
Sbjct: 449 YKKIIWETMNREYLEEQAAKEAAVLEAKKQHEFILANCPEDVQKFAAAAAASVAKSKKEK 508
Query: 709 XXXXXXXXXXXXAIPAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRVD 530
PAQTAAEAT+Q+L KKRLS+KINYDVLEKLFDDS PEN KK R
Sbjct: 509 QQKRAAELKNTG--PAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDSL-PENPKKARTA 565
Query: 529 SDSGDDTSKQLHGRVNQELDTDV 461
DS DD +G + ++D +V
Sbjct: 566 YDSTDD-----YGVKSDKIDPEV 583
>ref|XP_007029946.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 1 [Theobroma
cacao] gi|508718551|gb|EOY10448.1| Cyclin/Brf1-like
TBP-binding protein, putative isoform 1 [Theobroma cacao]
Length = 605
Score = 130 bits (328), Expect = 9e-28
Identities = 91/246 (36%), Positives = 115/246 (46%), Gaps = 5/246 (2%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GGS+PPAFQRAEKER+A++S EE+ P + VS+ ++
Sbjct: 331 GGSDPPAFQRAEKERIAKLSIEENANRASGSPFASGPEKPESIGVSEGTTKKAA------ 384
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
DE N + G D + DES+ SDIDD+EV GYLHNEEEKR+KKIIWEE
Sbjct: 385 -------FDEGDNDKLPGVD----GSGDESDNFSDIDDLEVDGYLHNEEEKRFKKIIWEE 433
Query: 865 MNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
MN+ AN++ C
Sbjct: 434 MNREYLEEQAAKEAAAAAAKEANMANYDKCPEDLQAAQELAAAAAAVVAKSRKERQQKRA 493
Query: 685 XXXXAI-PAQTAAEATRQILTKKRLSSKINYDVLEKLFDD----SEDPENSKKKRVDSDS 521
P QTAAEATR++L +KRLSSKINYD LEKLFD+ SE P+ K + +
Sbjct: 494 AEAKNSGPPQTAAEATRRMLARKRLSSKINYDALEKLFDEPVASSEKPKKQKNESHSDEK 553
Query: 520 GDDTSK 503
D SK
Sbjct: 554 EDKVSK 559
>ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|557545781|gb|ESR56759.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 567
Score = 125 bits (315), Expect = 3e-26
Identities = 88/222 (39%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINK-DVSQNENLESRCSERI 1049
GG++PPAFQ AE+ER+ + S EE+ + E SP +++ D Q+ ES +
Sbjct: 331 GGADPPAFQVAERERMVKASAEENSSF-----ERESDSPFMSRVDKVQSPEPESIGVPKN 385
Query: 1048 GAADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWE 869
T E +T+ G D A+ D S+ SDIDD EV GYLHNEEEK YKKIIWE
Sbjct: 386 CTTQTASNEGEGDHTKTPGVDATTEAS-DGSDNFSDIDDFEVDGYLHNEEEKHYKKIIWE 444
Query: 868 EMNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 689
EMN+ A++++C
Sbjct: 445 EMNREYLEEQAAKEAAAAAAKAALEASYKNCPEGLQAAQELAAAAAAAVAKSRKEKQQKR 504
Query: 688 XXXXXAI-PAQTAAEATRQILTKKRLSSKINYDVLEKLFDDS 566
PAQTA EATR++LTKKRLSSKINYDVLEKLFDDS
Sbjct: 505 AAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDS 546
>ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Populus trichocarpa]
gi|550348149|gb|ERP66119.1| hypothetical protein
POPTR_0001s25330g [Populus trichocarpa]
Length = 508
Score = 122 bits (305), Expect = 4e-25
Identities = 89/252 (35%), Positives = 122/252 (48%), Gaps = 8/252 (3%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMS-----QEESREELCQLRKEELPSPKINKDVSQNENLESRC 1061
GGS+PPAFQ AE++R+ S +ES + C+ R EE P V +++E+
Sbjct: 227 GGSDPPAFQNAERQRMKLSSVTHNLSKESNSQ-CESRDEERP-------VQDPKSVEASM 278
Query: 1060 SERIGAADTHQEVDENANTQPCGDDIMDNAAAD--ESETLSDIDDVEVAGYLHNEEEKRY 887
D Q+ D + D ++ D ES+ SDIDD EV YLHNEEEKRY
Sbjct: 279 GNLASDPDKLQD-----------DGVGDMSSKDFYESDGFSDIDDAEVDSYLHNEEEKRY 327
Query: 886 KKIIWEEMNKXXXXXXXXXXXXXXXXXXXXXANFEHC-SXXXXXXXXXXXXXXXXXXXXX 710
KKIIWEEMN+ NF++C
Sbjct: 328 KKIIWEEMNREYLQEQEAKEAATATHKEAWEENFKNCPEDLQAARKLDAAVKADLAKSKK 387
Query: 709 XXXXXXXXXXXXAIPAQTAAEATRQILTKKRLSSKINYDVLEKLFDDSEDPENSKKKRVD 530
++PA++AAEA ++LTKKR+SSKINYDVLEKLF++ E +++K+ R +
Sbjct: 388 EMQQKRAAEARNSVPAKSAAEAVHRMLTKKRISSKINYDVLEKLFEEPE-AKDAKRPRTE 446
Query: 529 SDSGDDTSKQLH 494
S D K LH
Sbjct: 447 SHP-DPVEKVLH 457
>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
vinifera]
Length = 529
Score = 113 bits (283), Expect = 1e-22
Identities = 61/123 (49%), Positives = 82/123 (66%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GGSEPPAFQRAE++R+A+ + EE+ + + +L + DV NE+ + + IG
Sbjct: 333 GGSEPPAFQRAERDRMAKAAAEENADS----NQIQLDKGSSSPDVCGNESSKLAEPKSIG 388
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
A+D +DE A + G D + A DESE+LSDIDDVEV GYLHNE+EK++KKIIWE
Sbjct: 389 ASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEA 448
Query: 865 MNK 857
MNK
Sbjct: 449 MNK 451
>ref|XP_006598955.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X1
[Glycine max] gi|571525383|ref|XP_006598956.1| PREDICTED:
transcription factor IIIB 90 kDa subunit-like isoform X2
[Glycine max]
Length = 623
Score = 110 bits (275), Expect = 1e-21
Identities = 85/264 (32%), Positives = 119/264 (45%), Gaps = 9/264 (3%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GG +PPAFQRAE+ER+ + EES +E C L K +K E+L + E IG
Sbjct: 331 GGLDPPAFQRAERERLKKTLPEESVDEACALANASNDQFKSHK-----EDLPAYVPESIG 385
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
A H+ + D+ DESETLSDIDD EV Y+H+EE K KKI+WE
Sbjct: 386 ANVEHEATKDGKYD--------DSHREDESETLSDIDDEEVDLYIHDEEGKHIKKILWET 437
Query: 865 MNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
N+ A FE+CS
Sbjct: 438 ANREYLEEQAAKEAAAAANKKAFEAKFENCSEDILAARELAASSIEAVAKSRKEMRQKRA 497
Query: 685 XXXXAI-PAQTAAEATRQILTKKR----LSSKINYDVLEKLFDDSEDPENS----KKKRV 533
PAQ+AAEA Q+ KKR L SK+N+++L +LFD+ + EN+ K+K+V
Sbjct: 498 YEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLNELFDEMDTQENTDGLKKQKKV 557
Query: 532 DSDSGDDTSKQLHGRVNQELDTDV 461
DS D L ++ + + ++
Sbjct: 558 RFDSPLDKHDNLPSKIENKNEDEM 581
>ref|XP_006604271.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X3
[Glycine max]
Length = 529
Score = 110 bits (274), Expect = 2e-21
Identities = 84/261 (32%), Positives = 118/261 (45%), Gaps = 6/261 (2%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GG +PPAFQRAE+ER + EES +E C L K +K E+L + E IG
Sbjct: 240 GGLDPPAFQRAERERFKKTLPEESVDEACALANASNDQFKSHK-----EDLHAYVPESIG 294
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
A H+ + D+ DESETLSDIDD EV Y+H+EE K KK++WE
Sbjct: 295 ANVEHEATKDGKYD--------DSHREDESETLSDIDDEEVDLYIHDEEGKHIKKLLWET 346
Query: 865 MNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
N+ ANFE+CS
Sbjct: 347 ANREYLEEQAAKEAAAAANKKAFEANFENCSEDLLAARELAASSAEAVAKSRKEMRQKRA 406
Query: 685 XXXXAI-PAQTAAEATRQILTKKR----LSSKINYDVLEKLFDDSEDPENSKK-KRVDSD 524
PAQ+AAEA Q+ KKR L SK+N+++L +LFD+ E+ ++ KK K+V D
Sbjct: 407 YEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLNELFDEMENTDDLKKPKKVRFD 466
Query: 523 SGDDTSKQLHGRVNQELDTDV 461
D + +V + + ++
Sbjct: 467 LPLDNDDNIPSKVEDKNEDEM 487
>ref|XP_006604269.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X1
[Glycine max]
Length = 620
Score = 110 bits (274), Expect = 2e-21
Identities = 84/261 (32%), Positives = 118/261 (45%), Gaps = 6/261 (2%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GG +PPAFQRAE+ER + EES +E C L K +K E+L + E IG
Sbjct: 331 GGLDPPAFQRAERERFKKTLPEESVDEACALANASNDQFKSHK-----EDLHAYVPESIG 385
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
A H+ + D+ DESETLSDIDD EV Y+H+EE K KK++WE
Sbjct: 386 ANVEHEATKDGKYD--------DSHREDESETLSDIDDEEVDLYIHDEEGKHIKKLLWET 437
Query: 865 MNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
N+ ANFE+CS
Sbjct: 438 ANREYLEEQAAKEAAAAANKKAFEANFENCSEDLLAARELAASSAEAVAKSRKEMRQKRA 497
Query: 685 XXXXAI-PAQTAAEATRQILTKKR----LSSKINYDVLEKLFDDSEDPENSKK-KRVDSD 524
PAQ+AAEA Q+ KKR L SK+N+++L +LFD+ E+ ++ KK K+V D
Sbjct: 498 YEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLNELFDEMENTDDLKKPKKVRFD 557
Query: 523 SGDDTSKQLHGRVNQELDTDV 461
D + +V + + ++
Sbjct: 558 LPLDNDDNIPSKVEDKNEDEM 578
>ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Populus trichocarpa]
gi|550331015|gb|EEE88095.2| hypothetical protein
POPTR_0009s04400g [Populus trichocarpa]
Length = 562
Score = 108 bits (270), Expect = 5e-21
Identities = 78/221 (35%), Positives = 98/221 (44%), Gaps = 1/221 (0%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GG++PPAFQ AE +R+ + S I +VS + NL +
Sbjct: 318 GGTDPPAFQNAESQRMKKSS--------------------IRHNVSDS-NLVTATGHLAN 356
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
D V + M + A DES+ SDIDD EV YLHNEEEKRYKKIIWEE
Sbjct: 357 DFDKLHGVGD-----------MSSKAFDESDGFSDIDDAEVDSYLHNEEEKRYKKIIWEE 405
Query: 865 MNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
MN+ NF++C
Sbjct: 406 MNREYLQEQAAKEAAAATLKKAWEENFKNCPEDLQAAKKLDAAVKADLAKSKKETQQKRA 465
Query: 685 XXXXAI-PAQTAAEATRQILTKKRLSSKINYDVLEKLFDDS 566
+ PA++AAEA ++LTKKRL SKINYDVLEKLF+DS
Sbjct: 466 SEARNLAPAKSAAEAVHRMLTKKRLGSKINYDVLEKLFEDS 506
>ref|XP_006604270.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Glycine max]
Length = 618
Score = 105 bits (262), Expect = 4e-20
Identities = 83/264 (31%), Positives = 115/264 (43%), Gaps = 9/264 (3%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GG +PPAFQRAE+ER + EES +E C L K +K+
Sbjct: 331 GGLDPPAFQRAERERFKKTLPEESVDEACALANASNDQFKSHKE---------------- 374
Query: 1045 AADTHQEVDENANTQ---PCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKII 875
D H V E AN + D+ DESETLSDIDD EV Y+H+EE K KK++
Sbjct: 375 --DLHAYVPERANVEHEATKDGKYDDSHREDESETLSDIDDEEVDLYIHDEEGKHIKKLL 432
Query: 874 WEEMNKXXXXXXXXXXXXXXXXXXXXXANFEHCSXXXXXXXXXXXXXXXXXXXXXXXXXX 695
WE N+ ANFE+CS
Sbjct: 433 WETANREYLEEQAAKEAAAAANKKAFEANFENCSEDLLAARELAASSAEAVAKSRKEMRQ 492
Query: 694 XXXXXXXAI-PAQTAAEATRQILTKKR----LSSKINYDVLEKLFDDSEDPENSKK-KRV 533
PAQ+AAEA Q+ KKR L SK+N+++L +LFD+ E+ ++ KK K+V
Sbjct: 493 KRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLNELFDEMENTDDLKKPKKV 552
Query: 532 DSDSGDDTSKQLHGRVNQELDTDV 461
D D + +V + + ++
Sbjct: 553 RFDLPLDNDDNIPSKVEDKNEDEM 576
>ref|XP_007029948.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 3 [Theobroma
cacao] gi|508718553|gb|EOY10450.1| Cyclin/Brf1-like
TBP-binding protein, putative isoform 3 [Theobroma cacao]
Length = 503
Score = 93.2 bits (230), Expect = 2e-16
Identities = 55/123 (44%), Positives = 70/123 (56%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GGS+PPAFQRAEKER+A++S EE+ P + VS+ ++
Sbjct: 331 GGSDPPAFQRAEKERIAKLSIEENANRASGSPFASGPEKPESIGVSEGTTKKAA------ 384
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
DE N + G D + DES+ SDIDD+EV GYLHNEEEKR+KKIIWEE
Sbjct: 385 -------FDEGDNDKLPGVD----GSGDESDNFSDIDDLEVDGYLHNEEEKRFKKIIWEE 433
Query: 865 MNK 857
MN+
Sbjct: 434 MNR 436
>ref|XP_007029947.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 2 [Theobroma
cacao] gi|508718552|gb|EOY10449.1| Cyclin/Brf1-like
TBP-binding protein, putative isoform 2 [Theobroma cacao]
Length = 492
Score = 93.2 bits (230), Expect = 2e-16
Identities = 55/123 (44%), Positives = 70/123 (56%)
Frame = -1
Query: 1225 GGSEPPAFQRAEKERVARMSQEESREELCQLRKEELPSPKINKDVSQNENLESRCSERIG 1046
GGS+PPAFQRAEKER+A++S EE+ P + VS+ ++
Sbjct: 331 GGSDPPAFQRAEKERIAKLSIEENANRASGSPFASGPEKPESIGVSEGTTKKAA------ 384
Query: 1045 AADTHQEVDENANTQPCGDDIMDNAAADESETLSDIDDVEVAGYLHNEEEKRYKKIIWEE 866
DE N + G D + DES+ SDIDD+EV GYLHNEEEKR+KKIIWEE
Sbjct: 385 -------FDEGDNDKLPGVD----GSGDESDNFSDIDDLEVDGYLHNEEEKRFKKIIWEE 433
Query: 865 MNK 857
MN+
Sbjct: 434 MNR 436