BLASTX nr result
ID: Cocculus23_contig00008995
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00008995
(1052 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006493413.1| PREDICTED: F-box protein At5g49610-like isof... 65 5e-08
ref|XP_006441410.1| hypothetical protein CICLE_v10020526mg [Citr... 65 5e-08
gb|EXB26154.1| F-box protein [Morus notabilis] 61 7e-07
ref|XP_006404983.1| hypothetical protein EUTSA_v10000704mg [Eutr... 58 7e-06
ref|XP_006376257.1| hypothetical protein POPTR_0013s11420g, part... 57 1e-05
>ref|XP_006493413.1| PREDICTED: F-box protein At5g49610-like isoform X1 [Citrus
sinensis] gi|568881067|ref|XP_006493414.1| PREDICTED:
F-box protein At5g49610-like isoform X2 [Citrus
sinensis]
Length = 390
Score = 65.1 bits (157), Expect = 5e-08
Identities = 66/277 (23%), Positives = 128/277 (46%), Gaps = 9/277 (3%)
Frame = -1
Query: 809 YKDTKIFIFNPITKQVVYIPNNKPRKLPRSLALASDPYNP----NNGFSLIGLVSPQRPN 642
+ D I++ NP+ K + + KP K S+ L DP + F L+ + + +
Sbjct: 125 FSDPAIYVCNPVNKDWIKLKWTKPDK-EDSVVLVFDPCQDMVDCSTNFKLVRVRQFETAS 183
Query: 641 R---FQFKVYSSKKGEWRMSNAELLVPSQELLRVNGPVCTGGKVYW-SIVRYIVWFDVGE 474
F F +Y S G WR+S E+ S +LL+ G + GG ++W + I+ F+V
Sbjct: 184 EDLYFSFDIYCSSTGAWRVSQ-EICYCSDKLLKNKG-IYVGGILHWLTDGDEILTFNVEN 241
Query: 473 DVAGLVECPSKCDLVILRPCDEDSYMEIGVCNGVLSYSKMTREGHIEIWLLRNRGGHEFE 294
+++ L+ P V + D +G +G L Y ++ G ++ W L + EF+
Sbjct: 242 ELSWLISVP-----VSAAQIESDYQSCVGESDGQLYYVMISENG-LQFWFLEDY--FEFK 293
Query: 293 WVKRHNVRLRGIVKKDWNIMSQFCPIKENCNRKAVVDNLIRHRSIYPLPYEGGEVLWFWM 114
W +++ L + ++ N + C + E R+ +D+ + + PL + G +L +
Sbjct: 294 WNLKYSKTLEVLEEEHPNFL---CNLHERVRRRPTIDS---NPWMDPLAFRDGILL---I 344
Query: 113 NVKKKLFSINLRTRELKVINEDLSLPAW-PFVPTLLP 6
V K+F ++ T ++ + L + ++PT+LP
Sbjct: 345 RVCAKIFLYHVETNKMNEVCYVSGLGTYSSYLPTVLP 381
>ref|XP_006441410.1| hypothetical protein CICLE_v10020526mg [Citrus clementina]
gi|557543672|gb|ESR54650.1| hypothetical protein
CICLE_v10020526mg [Citrus clementina]
Length = 390
Score = 65.1 bits (157), Expect = 5e-08
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 9/277 (3%)
Frame = -1
Query: 809 YKDTKIFIFNPITKQVVYIPNNKPRKLPRSLALASDPYNP----NNGFSLIGLVSPQRPN 642
+ D I++ NP+ K + + KP K S+ L DP + F L+ + + +
Sbjct: 125 FSDPAIYVCNPVNKDWIKLKWTKPDK-EDSVVLVFDPCQDMVDCSTNFKLVRVRQFETAS 183
Query: 641 R---FQFKVYSSKKGEWRMSNAELLVPSQELLRVNGPVCTGGKVYW-SIVRYIVWFDVGE 474
F F +Y S G WR+S E+ S +LL+ G + GG ++W + I+ F+V
Sbjct: 184 EDLYFSFDIYCSSTGAWRVSQ-EICYCSDKLLKNKG-IYVGGILHWLTDGDEILTFNVEN 241
Query: 473 DVAGLVECPSKCDLVILRPCDEDSYMEIGVCNGVLSYSKMTREGHIEIWLLRNRGGHEFE 294
+++ L+ P V + D IG +G L Y ++ G ++ W L + EF+
Sbjct: 242 ELSWLISVP-----VSAAQIESDYQSCIGESDGQLYYVMISENG-LQFWFLEDY--FEFK 293
Query: 293 WVKRHNVRLRGIVKKDWNIMSQFCPIKENCNRKAVVDNLIRHRSIYPLPYEGGEVLWFWM 114
W +++ L + ++ N + C + E R+ +D+ + + PL + G +L +
Sbjct: 294 WNLKYSKTLEVLEEEHPNFL---CNLHERVRRRPTIDS---NPWMDPLAFRDGILL---I 344
Query: 113 NVKKKLFSINLRTRELKVINEDLSLPAW-PFVPTLLP 6
V K+F ++ T ++ + L + ++PT+LP
Sbjct: 345 RVCAKIFLYHVETSKMNEVCYVSGLGTYSSYLPTVLP 381
>gb|EXB26154.1| F-box protein [Morus notabilis]
Length = 396
Score = 61.2 bits (147), Expect = 7e-07
Identities = 93/378 (24%), Positives = 163/378 (43%), Gaps = 29/378 (7%)
Frame = -1
Query: 1052 LFRFKLVCRKWQSLITQSPLFITNHSHNRANLYSCSSFYFDKLERVISSD---------- 903
L K V + W+SLI+ + R + S F F + + D
Sbjct: 24 LVGLKCVSKGWKSLISDRRFI---QAQLRKTELTVSGFIFQEKFQWYEEDIKTVSYIPVG 80
Query: 902 -DQYQFKLSKPKFLNKFDDIEGSTNGFFY-GYCY--KDTKIFIFNPITKQVVYIPNNKPR 735
+ ++ K S FL + + S +G C+ +D I+I NP+ K+ V + +
Sbjct: 81 KESFEVKQSVFDFLPEDIVVLASCDGLVCCRSCFPTEDPAIYICNPVNKEFVTL---RCA 137
Query: 734 KLPR--SLALASDP----YNPNNGFSLIG-----LVSPQRPNRFQFKVYSSKKGEWRMSN 588
L R S+ALA DP + + F ++ + + F F++YSSK GEWR SN
Sbjct: 138 GLDRDSSVALAFDPSQELVDTSTNFKVVRAQQFEIEEGEEDLYFTFEIYSSKAGEWRKSN 197
Query: 587 AELLVPSQELLRVNGPVCTGGKVYW-SIVRYIVWFDVGEDVAGLVECPSKCD--LVILRP 417
+ L N + GG ++W + I+ FD ++++ L+ P I +
Sbjct: 198 E--ICKCNTSLSKNKGIYIGGILHWLTDGDNILTFDSEKELSWLISVPVPASEFKSIPQA 255
Query: 416 CDEDSYMEIGVCNGVLSYSKMTREGHIEIWLLRNRGGHEFEWVKRHNVRLRGIVKKDWNI 237
C IG +G L Y ++ EG + +W L + E +W +++ LR + K+ +
Sbjct: 256 C-------IGESDGRLHYVMISEEG-LHLWCLEDY--FESKWALKYSKPLRTMEKEHPRL 305
Query: 236 MSQFCPIKENCNRKAVVDNLIRHRSIYPLPYEGGEVLWFWMNVKKKLFSINLRTRELKVI 57
+ C + E +V D + PL ++ G +L M V K++ + T +++V+
Sbjct: 306 L---CNLHERV--MSVYDT--ETPWVNPLAFKDGLLL---MIVSAKIYLYHFETSKMQVV 355
Query: 56 NEDLSLPAWP-FVPTLLP 6
E L + F PT+LP
Sbjct: 356 CEAFKLGSSSIFFPTVLP 373
>ref|XP_006404983.1| hypothetical protein EUTSA_v10000704mg [Eutrema salsugineum]
gi|557106111|gb|ESQ46436.1| hypothetical protein
EUTSA_v10000704mg [Eutrema salsugineum]
Length = 415
Score = 57.8 bits (138), Expect = 7e-06
Identities = 86/359 (23%), Positives = 147/359 (40%), Gaps = 29/359 (8%)
Frame = -1
Query: 1040 KLVCRKWQSLITQSP----LFITNH--SHNRANLY-------SCSSFYFDKLERVISSDD 900
KLVC++W+S+I +SP LF+ +H SH+ +L + Y K+ + S
Sbjct: 35 KLVCKQWKSII-ESPFLRELFLAHHQNSHSSWSLMLRNHSPKEVVAHYGCKVWGLQRSLG 93
Query: 899 QYQFKLSKPKFLNKFDDIEGSTNGFFYGYCYKDTK--------IFIFNPITKQVVYIPNN 744
Y L KF N+ + T C + ++ NP++ Q V IP
Sbjct: 94 SYVSSLITAKFHNQNVRVLAYTEVGLILICVITSSNPWTRIPTYYVANPVSGQCVKIP-- 151
Query: 743 KPRKLPRSL--ALASDPYNPNNGFSL------IGLVSPQRPNRFQFKVYSSKKGEWRMSN 588
LP S + A NG L I V+ + + F +YSS+ G W +N
Sbjct: 152 ---PLPESFHSSHAGLVTRTENGVVLSYKVVLIDTVNNRNEHLFTLIIYSSETGMWSSNN 208
Query: 587 AELLVPSQELLRVNGPVCTGGKVYWSIVRYIVWFDVGEDVAGLVECPSKCDLVILRPCDE 408
+P L ++ P+C GKV SI D+ G + P + VI P D
Sbjct: 209 LHYSIPISRL-KIPIPICLNGKVVVSI-----------DLYGSCDHPYR---VIPFP-DS 252
Query: 407 DSYMEIGVCNGVLSYSKMTREGHIEIWLLRNRGGHEFEWVKRHNVRLRGIVKKDWNIMSQ 228
+ M S T +G++ + + ++ E H +++ + +W ++S+
Sbjct: 253 EKKMNF-------KRSCTTSQGNLMYMNIASIYNYD-EGAMEHKLKVWRLKIGEWQLVSE 304
Query: 227 FCPIKENCNRKAVVDNLIRHRSIYPLPYEGGEVLWFWMNVKKKLFSINLRTRELKVINE 51
P + N + + ++ P++G ++ W + K L SINLR+ + V NE
Sbjct: 305 TSP--------GLSGNYLDYSPLFVHPFDGN-TMYMWSEMYKTLASINLRSGKSTVYNE 354
>ref|XP_006376257.1| hypothetical protein POPTR_0013s11420g, partial [Populus
trichocarpa] gi|550325533|gb|ERP54054.1| hypothetical
protein POPTR_0013s11420g, partial [Populus trichocarpa]
Length = 366
Score = 57.4 bits (137), Expect = 1e-05
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 12/193 (6%)
Frame = -1
Query: 791 FIFNPITKQVVYIPNNKPRKLPRSLALASDPYNPNNGFSLIGLVSPQRPNRFQFK--VYS 618
F+ N T+Q V IPN +PR P + A+A DP + + ++ + + K ++S
Sbjct: 130 FVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPH-YKVVRFIYLEEKTSCPVKLDIFS 188
Query: 617 SKKGEW----RMSNAEL---LVPSQELLRVNGPVCTGGKVY--WSIVRYIVWFDVGEDVA 465
S G+W M + EL + E + + G +Y +V Y++ FD+
Sbjct: 189 SDTGKWVRRGVMLSTELPHAAADADEYGCIRRSIYLDGMIYKLSFVVNYLIRFDLNAPSD 248
Query: 464 GLVECPSKCDLVILRPCDEDSYMEIGVCNGVLSYSKMTREG-HIEIWLLRNRGGHEFEWV 288
+E P K D + IG+ G L YS G I IWLL +R + W
Sbjct: 249 VAIELPHK------NAADRHGF--IGMSRGSLYYSNQDESGLMISIWLLEDRCKRDPFWK 300
Query: 287 KRHNVRLRGIVKK 249
HN+ + + K
Sbjct: 301 LTHNISVDSLTSK 313