BLASTX nr result

ID: Cocculus23_contig00008309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00008309
         (362 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239400.1| PREDICTED: uncharacterized protein LOC101265...    59   7e-07
ref|XP_003555938.2| PREDICTED: ATP-dependent RNA helicase A-like...    58   2e-06
ref|XP_006344322.1| PREDICTED: glycine-rich RNA-binding protein ...    58   2e-06
ref|XP_003536642.1| PREDICTED: keratin, type II cytoskeletal 2 e...    57   3e-06

>ref|XP_004239400.1| PREDICTED: uncharacterized protein LOC101265130 [Solanum
           lycopersicum]
          Length = 81

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -3

Query: 120 GPGFMKAPGREGFFVSRPAFEGNPKGYFSGLHGGQKGK 7
           G G MKAPG  G ++SR  FE NP+GYFSGLH GQKGK
Sbjct: 44  GGGSMKAPGGGGAYISRGGFESNPQGYFSGLHSGQKGK 81


>ref|XP_003555938.2| PREDICTED: ATP-dependent RNA helicase A-like [Glycine max]
          Length = 151

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = -3

Query: 114 GFMKAPGREGFFVSRPAFEGNPKGYFSGLHGGQKG 10
           G+MKAPG +G ++SR  FE NP+GYFSGLH G+KG
Sbjct: 33  GYMKAPGGDGAYISRGTFENNPQGYFSGLHAGEKG 67


>ref|XP_006344322.1| PREDICTED: glycine-rich RNA-binding protein 8-like [Solanum
           tuberosum]
          Length = 76

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -3

Query: 120 GPGFMKAPGREGFFVSRPAFEGNPKGYFSGLHGGQKGK 7
           G G MKAPG  G ++SR  FE NP+GYFSGLH G+KGK
Sbjct: 39  GGGSMKAPGGGGAYISRGGFESNPQGYFSGLHSGEKGK 76


>ref|XP_003536642.1| PREDICTED: keratin, type II cytoskeletal 2 epidermal [Glycine max]
           gi|255630383|gb|ACU15548.1| unknown [Glycine max]
          Length = 74

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -3

Query: 114 GFMKAPGREGFFVSRPAFEGNPKGYFSGLHGGQKG 10
           G+MKAPG +G ++SR  FE NP+GYFSGLHG  KG
Sbjct: 37  GYMKAPGGDGSYISRGTFENNPQGYFSGLHGADKG 71


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