BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00008148
         (555 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-24
ref|XP_006484639.1| PREDICTED: proteinaceous RNase P 1, chloropl...   114   2e-23
ref|XP_006437491.1| hypothetical protein CICLE_v10031025mg [Citr...   114   2e-23
ref|XP_006437490.1| hypothetical protein CICLE_v10031025mg [Citr...   114   2e-23
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]   113   3e-23
ref|XP_004297230.1| PREDICTED: proteinaceous RNase P 1, chloropl...   110   2e-22
gb|EXB44847.1| hypothetical protein L484_026428 [Morus notabilis]     107   3e-21
ref|XP_007225705.1| hypothetical protein PRUPE_ppa003560mg [Prun...   107   3e-21
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   101   1e-19
gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]            100   3e-19
ref|XP_007031684.1| Aceous RNase P 1 isoform 2 [Theobroma cacao]...    99   5e-19
ref|XP_007031683.1| Multidrug resistance pump, putative isoform ...    99   5e-19
ref|XP_002881217.1| pentatricopeptide repeat-containing protein ...    97   3e-18
ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana] ...    97   3e-18
gb|AAM13880.1| unknown protein [Arabidopsis thaliana]                  97   3e-18
ref|XP_006856537.1| hypothetical protein AMTR_s00046p00150030 [A...    96   5e-18
ref|XP_004172927.1| PREDICTED: proteinaceous RNase P 1, chloropl...    96   5e-18
ref|XP_004142562.1| PREDICTED: proteinaceous RNase P 1, chloropl...    96   5e-18
pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1...    96   6e-18

>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  117 bits (292), Expect = 3e-24
 Identities = 58/91 (63%), Positives = 70/91 (76%)
 Frame = -2

Query: 290 HLSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRL 111
           +L+ S  +  +P    S+     +SNKAR+KA RESPEG+L+  LDMCSK GDV+EALRL
Sbjct: 9   NLALSATNKYIPE---SSAVAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRL 65

Query: 110 YDDARSKGVSLSQHHYNVLLYLCSCSNSNCD 18
           YD+ARS+GV LSQHHYNVLLYLCSCS SN D
Sbjct: 66  YDEARSRGVPLSQHHYNVLLYLCSCSGSNGD 96


>ref|XP_006484639.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 593

 Score =  114 bits (285), Expect = 2e-23
 Identities = 55/94 (58%), Positives = 67/94 (71%)
 Frame = -2

Query: 287 LSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLY 108
           L T   S      + SAP T  +SNK+++KA RESPEG+L+  LDMCSK GDV EALRLY
Sbjct: 68  LCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFEALRLY 127

Query: 107 DDARSKGVSLSQHHYNVLLYLCSCSNSNCDGKGG 6
           DDARS G++LSQHHYNVLLY+CSC   +   + G
Sbjct: 128 DDARSNGITLSQHHYNVLLYVCSCKCGSESSENG 161


>ref|XP_006437491.1| hypothetical protein CICLE_v10031025mg [Citrus clementina]
           gi|557539687|gb|ESR50731.1| hypothetical protein
           CICLE_v10031025mg [Citrus clementina]
          Length = 593

 Score =  114 bits (285), Expect = 2e-23
 Identities = 55/94 (58%), Positives = 67/94 (71%)
 Frame = -2

Query: 287 LSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLY 108
           L T   S      + SAP T  +SNK+++KA RESPEG+L+  LDMCSK GDV EALRLY
Sbjct: 68  LCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFEALRLY 127

Query: 107 DDARSKGVSLSQHHYNVLLYLCSCSNSNCDGKGG 6
           DDARS G++LSQHHYNVLLY+CSC   +   + G
Sbjct: 128 DDARSNGITLSQHHYNVLLYVCSCKCGSESSENG 161


>ref|XP_006437490.1| hypothetical protein CICLE_v10031025mg [Citrus clementina]
           gi|557539686|gb|ESR50730.1| hypothetical protein
           CICLE_v10031025mg [Citrus clementina]
          Length = 584

 Score =  114 bits (285), Expect = 2e-23
 Identities = 55/94 (58%), Positives = 67/94 (71%)
 Frame = -2

Query: 287 LSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLY 108
           L T   S      + SAP T  +SNK+++KA RESPEG+L+  LDMCSK GDV EALRLY
Sbjct: 68  LCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFEALRLY 127

Query: 107 DDARSKGVSLSQHHYNVLLYLCSCSNSNCDGKGG 6
           DDARS G++LSQHHYNVLLY+CSC   +   + G
Sbjct: 128 DDARSNGITLSQHHYNVLLYVCSCKCGSESSENG 161


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  114 bits (285), Expect = 2e-23
 Identities = 58/91 (63%), Positives = 70/91 (76%)
 Frame = -2

Query: 290 HLSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRL 111
           +L+ S  +  +P    S+ A   +SNKAR+KA RESPEG+L+  LDMCSK GDV+EALRL
Sbjct: 378 NLALSATNKYIPE---SSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRL 434

Query: 110 YDDARSKGVSLSQHHYNVLLYLCSCSNSNCD 18
           YD+ARS GV LSQH+YNVLLYLCSCS SN D
Sbjct: 435 YDEARSLGVPLSQHNYNVLLYLCSCSGSNGD 465


>emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
          Length = 696

 Score =  113 bits (283), Expect = 3e-23
 Identities = 56/99 (56%), Positives = 72/99 (72%)
 Frame = -2

Query: 314 TSRKGAIHHLSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHG 135
           T++     +++ S  +  +P    S+ A   +SNK R+KA RESPEG+L+   DMCSKHG
Sbjct: 370 TNKSAHFLNVALSATNKYIPE---SSAAAKTMSNKTRKKARRESPEGVLRFKTDMCSKHG 426

Query: 134 DVLEALRLYDDARSKGVSLSQHHYNVLLYLCSCSNSNCD 18
           DV+EAL LYD+ARS+GV LSQH+YNVLLYLCSCS SN D
Sbjct: 427 DVVEALHLYDEARSRGVPLSQHNYNVLLYLCSCSGSNGD 465


>ref|XP_004297230.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 564

 Score =  110 bits (275), Expect = 2e-22
 Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = -2

Query: 239 APATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDARSKGVSLSQHHYN 60
           +PA P++SNKAR+KA R+ PE +LK  LDMCS+HG V+EALR+YD+AR+ GV LS HHYN
Sbjct: 73  SPAAPSVSNKARKKARRDLPEAVLKHKLDMCSRHGQVVEALRIYDEARTNGVPLSLHHYN 132

Query: 59  VLLYLCSCSNSNCD-GKGGG 3
           VLLYLCSC   + D G G G
Sbjct: 133 VLLYLCSCDGEDADVGLGRG 152


>gb|EXB44847.1| hypothetical protein L484_026428 [Morus notabilis]
          Length = 576

 Score =  107 bits (266), Expect = 3e-21
 Identities = 58/98 (59%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
 Frame = -2

Query: 284 STSTASSIVP-TQDGSAPATP----AISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEA 120
           ST  ASS         AP +P     ++ K +RKA+RESPEG+L+  LDMCSKHGDV EA
Sbjct: 59  STEKASSFCTLASPREAPPSPFSDTPLTAKMKRKAWRESPEGVLRHKLDMCSKHGDVSEA 118

Query: 119 LRLYDDARSKGVSLSQHHYNVLLYLCSCSNSNCDGKGG 6
           LRLYD+ARS GV LSQHHYNVLLYLCS   SN   + G
Sbjct: 119 LRLYDEARSIGVPLSQHHYNVLLYLCSSGESNGGDEDG 156


>ref|XP_007225705.1| hypothetical protein PRUPE_ppa003560mg [Prunus persica]
           gi|462422641|gb|EMJ26904.1| hypothetical protein
           PRUPE_ppa003560mg [Prunus persica]
          Length = 565

 Score =  107 bits (266), Expect = 3e-21
 Identities = 54/96 (56%), Positives = 70/96 (72%)
 Frame = -2

Query: 290 HLSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRL 111
           HL T   S+  P++  SAP    +SNK+++KA RESPEG+L+  LDMCS+ G ++EALR+
Sbjct: 57  HLCTLALSNDSPSRSASAPL---VSNKSKKKARRESPEGVLRHKLDMCSRQGHLVEALRI 113

Query: 110 YDDARSKGVSLSQHHYNVLLYLCSCSNSNCDGKGGG 3
           YD+ARS+G+ LS HHYNVLLYLCS SN   D  G G
Sbjct: 114 YDEARSRGLPLSLHHYNVLLYLCS-SNGGADDDGVG 148


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  101 bits (252), Expect = 1e-19
 Identities = 50/85 (58%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = -2

Query: 278 STASSIVPT-QDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDD 102
           S+A S  P   + SA A   +SNKA++KA +ESPEG+L+  +D CSKHG+++EALRLYD+
Sbjct: 71  SSALSAKPQIHESSALAAKKVSNKAKKKARQESPEGVLRSKIDNCSKHGNLVEALRLYDE 130

Query: 101 ARSKGVSLSQHHYNVLLYLCSCSNS 27
           AR  GV L+QHHYNVLLYLCS  +S
Sbjct: 131 ARINGVQLNQHHYNVLLYLCSSGSS 155


>gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]
          Length = 416

 Score =  100 bits (248), Expect = 3e-19
 Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
 Frame = -2

Query: 320 YPTSRK---GAIHHLSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDM 150
           +P  RK   G+IH  +   A++    +  +A  +  +S KA++KA ++SPE LLK+ LDM
Sbjct: 21  FPPERKFLSGSIHLCTLPLAAA----KQSAASPSENLSRKAKKKAIQQSPEALLKQKLDM 76

Query: 149 CSKHGDVLEALRLYDDARSKGVSLSQHHYNVLLYLCSCSNS 27
           CSK GDVLEALRLYD+AR  GV LSQ+HYNVLLY+CS + +
Sbjct: 77  CSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEA 117


>ref|XP_007031684.1| Aceous RNase P 1 isoform 2 [Theobroma cacao]
           gi|508710713|gb|EOY02610.1| Aceous RNase P 1 isoform 2
           [Theobroma cacao]
          Length = 490

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/80 (61%), Positives = 62/80 (77%)
 Frame = -2

Query: 278 STASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDA 99
           + A S V T +    +T A+SNKAR+KA+RESPE +LK  LDMCSKHG ++EAL LY++ 
Sbjct: 69  TAAKSTVNTSN----STNAMSNKARKKAHRESPESVLKYKLDMCSKHGKLVEALGLYEEG 124

Query: 98  RSKGVSLSQHHYNVLLYLCS 39
           RS GV+L QHHYNVLLYLC+
Sbjct: 125 RSNGVTLKQHHYNVLLYLCA 144


>ref|XP_007031683.1| Multidrug resistance pump, putative isoform 1 [Theobroma cacao]
           gi|508710712|gb|EOY02609.1| Multidrug resistance pump,
           putative isoform 1 [Theobroma cacao]
          Length = 574

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/80 (61%), Positives = 62/80 (77%)
 Frame = -2

Query: 278 STASSIVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDA 99
           + A S V T +    +T A+SNKAR+KA+RESPE +LK  LDMCSKHG ++EAL LY++ 
Sbjct: 69  TAAKSTVNTSN----STNAMSNKARKKAHRESPESVLKYKLDMCSKHGKLVEALGLYEEG 124

Query: 98  RSKGVSLSQHHYNVLLYLCS 39
           RS GV+L QHHYNVLLYLC+
Sbjct: 125 RSNGVTLKQHHYNVLLYLCA 144


>ref|XP_002881217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327056|gb|EFH57476.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 572

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = -2

Query: 263 IVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDARSKGV 84
           +   +  +A  +  +S KA++KA ++SPE LLK+ LDMCSK GDVLEALRLYD+AR  GV
Sbjct: 69  LAAAKQSAASPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGV 128

Query: 83  SLSQHHYNVLLYLCSCSNS 27
            LSQ+HYNVLLY+CS + +
Sbjct: 129 QLSQYHYNVLLYVCSLAEA 147


>ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
           gi|75115346|sp|Q66GI4.1|PRRP1_ARATH RecName:
           Full=Proteinaceous RNase P 1,
           chloroplastic/mitochondrial; AltName:
           Full=Pentatricopeptide repeat-containing protein
           At2g32230; Flags: Precursor gi|51536606|gb|AAU05541.1|
           At2g32230 [Arabidopsis thaliana]
           gi|330253558|gb|AEC08652.1| proteinaceous RNase P 1
           [Arabidopsis thaliana]
          Length = 572

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = -2

Query: 263 IVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDARSKGV 84
           +   +  +A  +  +S KA++KA ++SPE LLK+ LDMCSK GDVLEALRLYD+AR  GV
Sbjct: 69  LAAAKQSAASPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGV 128

Query: 83  SLSQHHYNVLLYLCSCSNS 27
            LSQ+HYNVLLY+CS + +
Sbjct: 129 QLSQYHYNVLLYVCSLAEA 147


>gb|AAM13880.1| unknown protein [Arabidopsis thaliana]
          Length = 572

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = -2

Query: 263 IVPTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDARSKGV 84
           +   +  +A  +  +S KA++KA ++SPE LLK+ LDMCSK GDVLEALRLYD+AR  GV
Sbjct: 69  LAAAKQSAASPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGV 128

Query: 83  SLSQHHYNVLLYLCSCSNS 27
            LSQ+HYNVLLY+CS + +
Sbjct: 129 QLSQYHYNVLLYVCSLAEA 147


>ref|XP_006856537.1| hypothetical protein AMTR_s00046p00150030 [Amborella trichopoda]
           gi|548860418|gb|ERN18004.1| hypothetical protein
           AMTR_s00046p00150030 [Amborella trichopoda]
          Length = 513

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/77 (61%), Positives = 56/77 (72%)
 Frame = -2

Query: 257 PTQDGSAPATPAISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDARSKGVSL 78
           PT     P  P  +   ++KA RESPEGLL+  LDMCSKHGD +EA+RLYDDA  KG+SL
Sbjct: 4   PTPQTPTPQ-PQETQTRKKKAKRESPEGLLRFGLDMCSKHGDAVEAIRLYDDALEKGISL 62

Query: 77  SQHHYNVLLYLCSCSNS 27
           S HHYNVLLY+CS  +S
Sbjct: 63  SLHHYNVLLYVCSSPSS 79


>ref|XP_004172927.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 461

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/104 (45%), Positives = 69/104 (66%)
 Frame = -2

Query: 350 KSTRKHCIRSYPTSRKGAIHHLSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGL 171
           K+  K+   SY +     + +L    +++       S  ++  +S+K R+KA +E+PE +
Sbjct: 50  KNILKYSCNSYFSIH--TVRYLCNVASAATSSVNASSTSSSNKVSHKLRKKALKEAPESV 107

Query: 170 LKRNLDMCSKHGDVLEALRLYDDARSKGVSLSQHHYNVLLYLCS 39
           LK NLDMCSK+G V++AL LYD+ARS G+ L+QHHYNVLLYLCS
Sbjct: 108 LKYNLDMCSKYGQVVKALELYDEARSNGIQLNQHHYNVLLYLCS 151


>ref|XP_004142562.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 588

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/104 (45%), Positives = 69/104 (66%)
 Frame = -2

Query: 350 KSTRKHCIRSYPTSRKGAIHHLSTSTASSIVPTQDGSAPATPAISNKARRKAYRESPEGL 171
           K+  K+   SY +     + +L    +++       S  ++  +S+K R+KA +E+PE +
Sbjct: 50  KNILKYSCNSYFSIH--TVRYLCNVASAATSSVNASSTSSSNKVSHKLRKKALKEAPESV 107

Query: 170 LKRNLDMCSKHGDVLEALRLYDDARSKGVSLSQHHYNVLLYLCS 39
           LK NLDMCSK+G V++AL LYD+ARS G+ L+QHHYNVLLYLCS
Sbjct: 108 LKYNLDMCSKYGQVVKALELYDEARSNGIQLNQHHYNVLLYLCS 151


>pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
           A. Thaliana With Mn gi|406855805|pdb|4G26|A Chain A,
           Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1)
           From A. Thaliana With Ca
          Length = 501

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = -2

Query: 221 ISNKARRKAYRESPEGLLKRNLDMCSKHGDVLEALRLYDDARSKGVSLSQHHYNVLLYLC 42
           +S KA++KA ++SPE LLK+ LDMCSK GDVLEALRLYD+AR  GV LSQ+HYNVLLY+C
Sbjct: 12  LSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVC 71

Query: 41  SCSNS 27
           S + +
Sbjct: 72  SLAEA 76