BLASTX nr result
ID: Cocculus23_contig00008018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00008018
(916 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315330.1| glycine-rich RNA-binding family protein [Pop... 104 6e-20
emb|CBI31404.3| unnamed protein product [Vitis vinifera] 102 2e-19
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop... 102 2e-19
emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera] 102 2e-19
ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein ... 100 8e-19
ref|XP_006436516.1| hypothetical protein CICLE_v100325201mg [Cit... 100 8e-19
ref|XP_006436514.1| hypothetical protein CICLE_v100325201mg [Cit... 100 8e-19
ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Popu... 100 1e-18
gb|EYU39873.1| hypothetical protein MIMGU_mgv1a011311mg [Mimulus... 98 4e-18
ref|XP_004307343.1| PREDICTED: uncharacterized protein LOC101306... 98 4e-18
ref|XP_007218796.1| hypothetical protein PRUPE_ppa009799mg [Prun... 97 1e-17
ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207... 93 2e-16
gb|EXB96179.1| Glycine-rich RNA-binding, abscisic acid-inducible... 91 6e-16
ref|XP_006364447.1| PREDICTED: TATA-binding protein-associated f... 90 1e-15
ref|XP_006364446.1| PREDICTED: TATA-binding protein-associated f... 90 1e-15
ref|XP_006605889.1| PREDICTED: glycine-rich RNA-binding protein ... 89 3e-15
ref|XP_003555886.1| PREDICTED: glycine-rich RNA-binding protein ... 89 3e-15
gb|ACU23136.1| unknown [Glycine max] 89 3e-15
ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [... 89 3e-15
ref|XP_006361692.1| PREDICTED: heterogeneous nuclear ribonucleop... 87 9e-15
>ref|XP_002315330.1| glycine-rich RNA-binding family protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 280
Score = 104 bits (259), Expect = 6e-20
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = +1
Query: 85 ASDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGS 261
ASDRYPP GDR +GDRYGGSDRY QNGYGKD+ YDRD GPR G DRYGSGGP R + S
Sbjct: 199 ASDRYPPNGDRFSGDRYGGSDRYAQNGYGKDKGYDRDVGPRGGNDRYGSGGPQRNDRSS 257
>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 102 bits (254), Expect = 2e-19
Identities = 48/79 (60%), Positives = 50/79 (63%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGSXX 267
+DRY P GDR +GDRYGGSDRYPQNGYGKDR YDRDA PR GGDRY GG R EG S
Sbjct: 214 NDRYAPSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYR 273
Query: 268 XXXXXXXXXXXXXXXSSFD 324
SSFD
Sbjct: 274 NRPGPYDRPNRGGRPSSFD 292
>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 102 bits (254), Expect = 2e-19
Identities = 48/79 (60%), Positives = 50/79 (63%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGSXX 267
+DRY P GDR +GDRYGGSDRYPQNGYGKDR YDRDA PR GGDRY GG R EG S
Sbjct: 198 NDRYAPSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYR 257
Query: 268 XXXXXXXXXXXXXXXSSFD 324
SSFD
Sbjct: 258 NRPGPYDRPNRGGRPSSFD 276
>emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
Length = 240
Score = 102 bits (254), Expect = 2e-19
Identities = 48/79 (60%), Positives = 50/79 (63%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGSXX 267
+DRY P GDR +GDRYGGSDRYPQNGYGKDR YDRDA PR GGDRY GG R EG S
Sbjct: 160 NDRYAPSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYR 219
Query: 268 XXXXXXXXXXXXXXXSSFD 324
SSFD
Sbjct: 220 NRPGPYDRPNRGGRPSSFD 238
>ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein 10-like isoform X1
[Citrus sinensis]
Length = 280
Score = 100 bits (249), Expect = 8e-19
Identities = 43/56 (76%), Positives = 47/56 (83%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEG 255
SDRYPP GDRLAGDRYGGSDRYP NGYGK+R Y+RD G R+G DRY SGGP R +G
Sbjct: 201 SDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDG 256
>ref|XP_006436516.1| hypothetical protein CICLE_v100325201mg [Citrus clementina]
gi|568864382|ref|XP_006485578.1| PREDICTED: glycine-rich
RNA-binding protein 10-like isoform X2 [Citrus sinensis]
gi|557538712|gb|ESR49756.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
Length = 255
Score = 100 bits (249), Expect = 8e-19
Identities = 43/56 (76%), Positives = 47/56 (83%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEG 255
SDRYPP GDRLAGDRYGGSDRYP NGYGK+R Y+RD G R+G DRY SGGP R +G
Sbjct: 176 SDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDG 231
>ref|XP_006436514.1| hypothetical protein CICLE_v100325201mg [Citrus clementina]
gi|567887986|ref|XP_006436515.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
gi|557538710|gb|ESR49754.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
gi|557538711|gb|ESR49755.1| hypothetical protein
CICLE_v100325201mg [Citrus clementina]
Length = 242
Score = 100 bits (249), Expect = 8e-19
Identities = 43/56 (76%), Positives = 47/56 (83%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEG 255
SDRYPP GDRLAGDRYGGSDRYP NGYGK+R Y+RD G R+G DRY SGGP R +G
Sbjct: 163 SDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDG 218
>ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Populus trichocarpa]
gi|550332329|gb|EEE89356.2| hypothetical protein
POPTR_0008s03290g [Populus trichocarpa]
Length = 279
Score = 99.8 bits (247), Expect = 1e-18
Identities = 45/55 (81%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 ASDRYPP-GGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTR 246
ASDRYPP GDR AGDRY GSDRY QNGYGKDR YDRD GPR G DRYGSGGP+R
Sbjct: 198 ASDRYPPPNGDRFAGDRYSGSDRYAQNGYGKDRGYDRDGGPRGGNDRYGSGGPSR 252
>gb|EYU39873.1| hypothetical protein MIMGU_mgv1a011311mg [Mimulus guttatus]
Length = 286
Score = 98.2 bits (243), Expect = 4e-18
Identities = 44/60 (73%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 85 ASDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRY-GSGGPTRYEGGS 261
A+DRY P GDR DRYGGS+R+PQNGYGKDR Y+RD GPR GGDRY G GGP RYEG S
Sbjct: 204 ANDRYVPAGDRFPIDRYGGSERFPQNGYGKDRGYERDVGPRGGGDRYGGGGGPARYEGRS 263
>ref|XP_004307343.1| PREDICTED: uncharacterized protein LOC101306961 [Fragaria vesca
subsp. vesca]
Length = 284
Score = 98.2 bits (243), Expect = 4e-18
Identities = 45/57 (78%), Positives = 45/57 (78%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGG 258
SDRYP GDR A DRYGGSDRYPQNGYGKDR YDRD G R G DRYG GGP R EGG
Sbjct: 206 SDRYP-AGDRFASDRYGGSDRYPQNGYGKDRGYDRDGGVRGGSDRYGRGGPARDEGG 261
>ref|XP_007218796.1| hypothetical protein PRUPE_ppa009799mg [Prunus persica]
gi|462415258|gb|EMJ19995.1| hypothetical protein
PRUPE_ppa009799mg [Prunus persica]
Length = 277
Score = 96.7 bits (239), Expect = 1e-17
Identities = 50/79 (63%), Positives = 51/79 (64%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGSXX 267
SDRYP GDR A DRYGGSDRYPQNGYGKDR YDRDA R G DRYGSGGP R EGG+
Sbjct: 200 SDRYP-AGDRFASDRYGGSDRYPQNGYGKDRGYDRDA--RGGSDRYGSGGPARDEGGNYR 256
Query: 268 XXXXXXXXXXXXXXXSSFD 324
SSFD
Sbjct: 257 SRAGPYDRPSRGGRPSSFD 275
>ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED:
uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 92.8 bits (229), Expect = 2e-16
Identities = 44/58 (75%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +1
Query: 91 DRYPPGGDRLAG-DRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGS 261
DRYP GDR G DRY SDRYPQNGY KDR YDRD GPRSG DRYGSGGP R+EG S
Sbjct: 203 DRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRS 260
>gb|EXB96179.1| Glycine-rich RNA-binding, abscisic acid-inducible protein [Morus
notabilis]
Length = 275
Score = 90.9 bits (224), Expect = 6e-16
Identities = 47/79 (59%), Positives = 49/79 (62%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGSXX 267
SDRY PG DR A DRY +DRYP NGYGKDR +DRD GPR GGDRYGSGGP R EG S
Sbjct: 197 SDRYQPG-DRFANDRYNSADRYPLNGYGKDRGFDRDGGPR-GGDRYGSGGPARNEGKSYR 254
Query: 268 XXXXXXXXXXXXXXXSSFD 324
SSFD
Sbjct: 255 SRPDPYDRPNRGGRPSSFD 273
>ref|XP_006364447.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform
X2 [Solanum tuberosum]
Length = 266
Score = 90.1 bits (222), Expect = 1e-15
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEG 255
SDRYPPGGDRL G+RYGGSDRYPQNGYGK+R +DRD GDRY +GGP RYEG
Sbjct: 192 SDRYPPGGDRL-GNRYGGSDRYPQNGYGKERGFDRDV-----GDRYEAGGPARYEG 241
>ref|XP_006364446.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform
X1 [Solanum tuberosum]
Length = 271
Score = 90.1 bits (222), Expect = 1e-15
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = +1
Query: 88 SDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEG 255
SDRYPPGGDRL G+RYGGSDRYPQNGYGK+R +DRD GDRY +GGP RYEG
Sbjct: 197 SDRYPPGGDRL-GNRYGGSDRYPQNGYGKERGFDRDV-----GDRYEAGGPARYEG 246
>ref|XP_006605889.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X2 [Glycine max]
Length = 255
Score = 88.6 bits (218), Expect = 3e-15
Identities = 41/59 (69%), Positives = 42/59 (71%)
Frame = +1
Query: 85 ASDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGS 261
ASDRYP GDR A DRYGG YPQNGYGK+R YDR GPR G DRYGSG R EG S
Sbjct: 175 ASDRYPTSGDRFASDRYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMGGRDEGRS 233
>ref|XP_003555886.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Glycine max]
Length = 279
Score = 88.6 bits (218), Expect = 3e-15
Identities = 41/59 (69%), Positives = 42/59 (71%)
Frame = +1
Query: 85 ASDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGS 261
ASDRYP GDR A DRYGG YPQNGYGK+R YDR GPR G DRYGSG R EG S
Sbjct: 199 ASDRYPTSGDRFASDRYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMGGRDEGRS 257
>gb|ACU23136.1| unknown [Glycine max]
Length = 279
Score = 88.6 bits (218), Expect = 3e-15
Identities = 41/59 (69%), Positives = 42/59 (71%)
Frame = +1
Query: 85 ASDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGS 261
ASDRYP GDR A DRYGG YPQNGYGK+R YDR GPR G DRYGSG R EG S
Sbjct: 199 ASDRYPTSGDRFASDRYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMGGRDEGRS 257
>ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 276
Score = 88.6 bits (218), Expect = 3e-15
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = +1
Query: 85 ASDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGP 240
AS+RYPP GDR A DRYGGSDRY N YGKDR Y+RDA R G DRYG+GGP
Sbjct: 197 ASERYPPSGDRFASDRYGGSDRYAHNSYGKDRGYERDAVTRGGSDRYGNGGP 248
>ref|XP_006361692.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum
tuberosum]
Length = 331
Score = 87.0 bits (214), Expect = 9e-15
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +1
Query: 85 ASDRYPPGGDRLAGDRYGGSDRYPQNGYGKDRSYDRDAGPRSGGDRYGSGGPTRYEGGS 261
A+DR+P GGDR A ++YG SDRY QNG GK+R +DRD GPR GDRY SGGP RYEG S
Sbjct: 248 ANDRHPAGGDRFADNKYGVSDRYGQNGSGKERGFDRDVGPRD-GDRYSSGGPARYEGKS 305