BLASTX nr result
ID: Cocculus23_contig00007755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00007755
(1165 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007046213.1| SsDNA-binding transcriptional regulator isof... 347 4e-93
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253... 344 5e-92
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm... 338 2e-90
ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Caps... 336 1e-89
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra... 335 2e-89
ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabi... 335 3e-89
ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding prote... 334 4e-89
ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citr... 334 4e-89
ref|XP_007222475.1| hypothetical protein PRUPE_ppa009776mg [Prun... 329 1e-87
ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protei... 329 1e-87
ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, ch... 329 1e-87
gb|ADL36850.1| WHY domain class transcription factor [Malus dome... 329 1e-87
ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Popu... 323 7e-86
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul... 320 7e-85
ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding prote... 320 9e-85
ref|XP_006842726.1| hypothetical protein AMTR_s00133p00020030 [A... 318 3e-84
ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Ar... 317 5e-84
gb|AFK42652.1| unknown [Lotus japonicus] 317 6e-84
gb|EYU28713.1| hypothetical protein MIMGU_mgv1a009792mg [Mimulus... 316 1e-83
ref|XP_002315793.2| hypothetical protein POPTR_0010s10260g [Popu... 315 2e-83
>ref|XP_007046213.1| SsDNA-binding transcriptional regulator isoform 1 [Theobroma cacao]
gi|508710148|gb|EOY02045.1| SsDNA-binding transcriptional
regulator isoform 1 [Theobroma cacao]
Length = 270
Score = 347 bits (891), Expect = 4e-93
Identities = 176/267 (65%), Positives = 207/267 (77%)
Frame = -3
Query: 1124 LLLSSFVPYECSKCPSKFTKQSLIRNPNLSLNPPFWVSENNKKKKLFTLKCRRSDYFEQQ 945
L S P + S F+ + LNP +S K K F+LKCR+S+YF+QQ
Sbjct: 12 LSAQSLNPNSNTNLLSSFSSLKSTQTHAFKLNP---LSLTPKPSK-FSLKCRQSEYFDQQ 67
Query: 944 DQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPKAPEFAPLDSGAFKVSRD 765
QRFS SS A G PP+ +VGHSVYKGKAALTVEP+APEF PLDSGAFK+SR+
Sbjct: 68 -QRFSNSSST---ASPPASGLPPRFYVGHSVYKGKAALTVEPRAPEFVPLDSGAFKISRE 123
Query: 764 GYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFHDPFKGKSDEGKVR 585
G+VLLQFAP G RQYDWSRKQVFSLSVTEIG L+ LGAR+SCEFFHDPFKGKS+EGKVR
Sbjct: 124 GFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGALISLGARESCEFFHDPFKGKSEEGKVR 183
Query: 584 KVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAFNFILPYLMGWHTF 405
KVL+VEPLPDGSGHFFNL VQN+L+N+DE+IYIPIT+AEFTVL SAF+FILPYL+GWH F
Sbjct: 184 KVLKVEPLPDGSGHFFNLGVQNRLLNLDENIYIPITRAEFTVLNSAFSFILPYLLGWHAF 243
Query: 404 ADSIRPEDAGRLNNTNSQGGAELEWSR 324
A+SI+PE+A R+NN N + G + EWSR
Sbjct: 244 ANSIKPEEASRVNNANPRYGGDYEWSR 270
>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
gi|296086421|emb|CBI32010.3| unnamed protein product
[Vitis vinifera]
Length = 268
Score = 344 bits (882), Expect = 5e-92
Identities = 168/270 (62%), Positives = 209/270 (77%), Gaps = 1/270 (0%)
Frame = -3
Query: 1130 IQLLLSSFVPYECSKCPSKFTKQSLIRNP-NLSLNPPFWVSENNKKKKLFTLKCRRSDYF 954
+ LL SSF CP+ +P + + P +S +K +L+CR+SDYF
Sbjct: 4 LHLLSSSFTIQNPRLCPNHSLSSLHSSSPLSFTSRTPLLLSTTRHFRKKRSLQCRQSDYF 63
Query: 953 EQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPKAPEFAPLDSGAFKV 774
+QQ+ + +D+SF G P+VFVGHS+YKGKAALTVEPKAPEF PLDSGAFKV
Sbjct: 64 QQQNITRRQPPNDSSFG----GALQPRVFVGHSIYKGKAALTVEPKAPEFTPLDSGAFKV 119
Query: 773 SRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFHDPFKGKSDEG 594
S++G+VLLQFAP G RQYDW RKQVFSLSVTEIG+L+ LGAR+SCEFFHDPFKG+S+EG
Sbjct: 120 SKEGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEG 179
Query: 593 KVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAFNFILPYLMGW 414
KVRKVL+VEPLPDGSGHFFNLSVQNKL+N+DE+IYIP+T+AEF VL+SAFNFI+PYL+GW
Sbjct: 180 KVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGW 239
Query: 413 HTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
H +A+SI+P+D R+NN N + G + EWSR
Sbjct: 240 HAYANSIKPDDTSRVNNANPRSG-DFEWSR 268
>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
gi|223540620|gb|EEF42183.1| conserved hypothetical
protein [Ricinus communis]
Length = 271
Score = 338 bits (868), Expect = 2e-90
Identities = 163/241 (67%), Positives = 201/241 (83%), Gaps = 3/241 (1%)
Frame = -3
Query: 1037 SLNPPFWVSENNKKKKLFTLKCRRSDYFEQQDQRFSRG---SSDNSFARHSVGGFPPKVF 867
+++ P +S N + +KCR+S++++QQ Q+++ S+D+SFA S P +V+
Sbjct: 36 TISAPRRLSTNTNR----AVKCRQSEFYDQQQQKYNPSRPSSNDSSFASQSPAAVP-RVY 90
Query: 866 VGHSVYKGKAALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSL 687
VGHS+YKGKAALTVEP+APEFA LDSGAFKV+R+G+VLLQFAP G RQYDWSRKQVFSL
Sbjct: 91 VGHSIYKGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSL 150
Query: 686 SVTEIGTLMGLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMN 507
SVTEIGT++ LGARDSCEFFHDP KGKSDEGK+RKVL+VEPLPDGSGHFFNLSVQNK MN
Sbjct: 151 SVTEIGTIISLGARDSCEFFHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMN 210
Query: 506 VDESIYIPITKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWS 327
+DESIYIP+TKAEF VL+SAFN+ILPYL+GWHTFA+SI+P+ G +NN N + G + EWS
Sbjct: 211 MDESIYIPVTKAEFAVLISAFNYILPYLLGWHTFANSIKPDLNGHMNNANPRFGGDYEWS 270
Query: 326 R 324
R
Sbjct: 271 R 271
>ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Capsella rubella]
gi|482571985|gb|EOA36172.1| hypothetical protein
CARUB_v10010024mg [Capsella rubella]
Length = 266
Score = 336 bits (861), Expect = 1e-89
Identities = 157/232 (67%), Positives = 194/232 (83%)
Frame = -3
Query: 1019 WVSENNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGK 840
+V + KK ++K R++DYFE+Q RF SS S++ + G P + +VGHS+YKGK
Sbjct: 37 FVLKPTKKTVKLSVKSRQTDYFEKQ--RFGDSSSSPSYSSQNAEGSPARFYVGHSIYKGK 94
Query: 839 AALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLM 660
AALTVEP+APEF LDSGAFK+S+DG++LLQFAP G RQYDWS+KQVFSLSVTEIGTL+
Sbjct: 95 AALTVEPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLV 154
Query: 659 GLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPI 480
LG ++SCEFFHDPFKGKSDEGKVRKVL+VEPLPDGSGHFFNLSVQNKL+NVD++IYIPI
Sbjct: 155 SLGPKESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDDNIYIPI 214
Query: 479 TKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
T+AEF VL+SAFNF+LPYL+GWH FA+SI+PED+ R+NN + G + EW+R
Sbjct: 215 TRAEFAVLISAFNFVLPYLIGWHAFANSIKPEDSNRMNNASPNYGGDYEWNR 266
>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
lyrata subsp. lyrata]
Length = 264
Score = 335 bits (860), Expect = 2e-89
Identities = 161/233 (69%), Positives = 191/233 (81%)
Frame = -3
Query: 1022 FWVSENNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKG 843
F + K KLF++K R++DYFE+Q RF SS +S + G P + +VGHS+YKG
Sbjct: 37 FALKPTTKTVKLFSVKSRQTDYFEKQ--RFGDSSSSSS---QNAEGLPARFYVGHSIYKG 91
Query: 842 KAALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTL 663
KAALT+EP+APEF LDSGAFK+S+DG++LLQFAP G RQYDWS+KQVFSLSVTEIGTL
Sbjct: 92 KAALTMEPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTL 151
Query: 662 MGLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIP 483
+ LG R+SCEFFHDPFKGKSDEGKVRKVL+VEPLPDGSGHFFNLSVQNKL+NVDESIYIP
Sbjct: 152 VSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIP 211
Query: 482 ITKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
IT+AEF VL+SAFNF+LPYL+GWH FA+SI+PED R NN G + EW+R
Sbjct: 212 ITRAEFAVLISAFNFVLPYLIGWHAFANSIKPEDTNRANNAPPNYGGDYEWNR 264
>ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabidopsis thaliana]
gi|75191428|sp|Q9M9S3.1|WHY1_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY1,
chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 1; AltName: Full=Protein WHIRLY
1; Short=AtWHY1; Flags: Precursor
gi|7262683|gb|AAF43941.1|AC012188_18 Contains similarity
to a hypothetical protein from Arabidopsis thaliana
gb|AC002521.2. EST gb|AI995686 comes from this gene
[Arabidopsis thaliana]
gi|12083312|gb|AAG48815.1|AF332452_1 putative DNA-binding
protein p24 [Arabidopsis thaliana]
gi|13877787|gb|AAK43971.1|AF370156_1 putative DNA-binding
protein p24 [Arabidopsis thaliana]
gi|16323418|gb|AAL15203.1| putative DNA-binding protein
p24 [Arabidopsis thaliana] gi|332191039|gb|AEE29160.1|
ssDNA-binding transcriptional regulator [Arabidopsis
thaliana]
Length = 263
Score = 335 bits (858), Expect = 3e-89
Identities = 161/233 (69%), Positives = 192/233 (82%)
Frame = -3
Query: 1022 FWVSENNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKG 843
F + K KLF++K R++DYFE+Q RF SS S A G P + +VGHS+YKG
Sbjct: 37 FALKPTTKTVKLFSVKSRQTDYFEKQ--RFGDSSSSPSPAE----GLPARFYVGHSIYKG 90
Query: 842 KAALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTL 663
KAALTV+P+APEF LDSGAFK+S+DG++LLQFAP G RQYDWS+KQVFSLSVTEIGTL
Sbjct: 91 KAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTL 150
Query: 662 MGLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIP 483
+ LG R+SCEFFHDPFKGKSDEGKVRKVL+VEPLPDGSGHFFNLSVQNKL+NVDESIYIP
Sbjct: 151 VSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIP 210
Query: 482 ITKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
IT+AEF VL+SAFNF+LPYL+GWH FA+SI+PE+ R+NN + G + EW+R
Sbjct: 211 ITRAEFAVLISAFNFVLPYLIGWHAFANSIKPEETSRVNNASPNYGGDYEWNR 263
>ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding protein WHY1,
chloroplastic-like [Citrus sinensis]
Length = 267
Score = 334 bits (857), Expect = 4e-89
Identities = 161/232 (69%), Positives = 197/232 (84%), Gaps = 2/232 (0%)
Frame = -3
Query: 1013 SENNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARH--SVGGFPPKVFVGHSVYKGK 840
S + KKKKL+ +KCR+S+Y+EQ+ FS S++S+A +VG P +V+VGHS+YKGK
Sbjct: 39 STSIKKKKLY-VKCRQSEYYEQKS--FSASPSNSSYAPTDVAVGTLPTRVYVGHSIYKGK 95
Query: 839 AALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLM 660
AALTVEP+ PEF LDSGA K+SR+G+V+LQFAP G RQYDWSRKQVFSLSVTEIG+L+
Sbjct: 96 AALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLV 155
Query: 659 GLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPI 480
LGAR+SCEFFHDPFKGKS+EGKVRKVL+VEPLPDGSGHFFNLSVQNKL+N+DESIYIP+
Sbjct: 156 ALGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPV 215
Query: 479 TKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
T+AE+TVLVSAFNFILPYL+GWH +A +IR +D R NN N + G + EW+R
Sbjct: 216 TRAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267
>ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
gi|557540823|gb|ESR51867.1| hypothetical protein
CICLE_v10032427mg [Citrus clementina]
Length = 267
Score = 334 bits (857), Expect = 4e-89
Identities = 161/232 (69%), Positives = 197/232 (84%), Gaps = 2/232 (0%)
Frame = -3
Query: 1013 SENNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARH--SVGGFPPKVFVGHSVYKGK 840
S + KKKKL+ +KCR+S+Y+EQ+ FS S++S+A +VG P +V+VGHS+YKGK
Sbjct: 39 STSIKKKKLY-VKCRQSEYYEQKS--FSASPSNSSYAPTDVAVGTLPTRVYVGHSIYKGK 95
Query: 839 AALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLM 660
AALTVEP+ PEF LDSGA K+SR+G+V+LQFAP G RQYDWSRKQVFSLSVTEIG+L+
Sbjct: 96 AALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLV 155
Query: 659 GLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPI 480
LGAR+SCEFFHDPFKGKS+EGKVRKVL+VEPLPDGSGHFFNLSVQNKL+N+DESIYIP+
Sbjct: 156 ALGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPV 215
Query: 479 TKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
T+AE+TVLVSAFNFILPYL+GWH +A +IR +D R NN N + G + EW+R
Sbjct: 216 TRAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267
>ref|XP_007222475.1| hypothetical protein PRUPE_ppa009776mg [Prunus persica]
gi|462419411|gb|EMJ23674.1| hypothetical protein
PRUPE_ppa009776mg [Prunus persica]
Length = 278
Score = 329 bits (844), Expect = 1e-87
Identities = 159/233 (68%), Positives = 194/233 (83%), Gaps = 6/233 (2%)
Frame = -3
Query: 1004 NKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVG------GFPPKVFVGHSVYKG 843
+ +K +LKCR+S+YF+QQ R S S+ N + + G PP+ FVGHS+YKG
Sbjct: 48 SSSRKRLSLKCRQSEYFDQQ--RASTASAPNKPSPPAPQTPAGGTGLPPRFFVGHSIYKG 105
Query: 842 KAALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTL 663
KAALTVEPKAPEF LDSGAFK+SR+G+VLLQFAP G R YDWSRKQVFSLSVTEIG+L
Sbjct: 106 KAALTVEPKAPEFTALDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSL 165
Query: 662 MGLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIP 483
+ LG+++S EFFHDPFKGKSDEGKVRKVL+VEPLPDGSGHFFNLSVQNKL+N+DES+YIP
Sbjct: 166 VCLGSKESIEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESVYIP 225
Query: 482 ITKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
IT+AEF VL SAFNFILPY++GWH +A+SI+PED+ R+NN++S+ G + EWSR
Sbjct: 226 ITRAEFAVLKSAFNFILPYILGWHAYANSIKPEDSSRMNNSSSRYGGDFEWSR 278
>ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protein WHY1,
chloroplastic-like [Solanum lycopersicum]
Length = 268
Score = 329 bits (844), Expect = 1e-87
Identities = 155/220 (70%), Positives = 185/220 (84%)
Frame = -3
Query: 983 TLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPKAPEF 804
+L CR SDYFE Q Q+ + G PKVFVG+S+YKGKAALTVEP++PEF
Sbjct: 60 SLTCRHSDYFEPQQQQ-----------QQLQGASTPKVFVGYSIYKGKAALTVEPRSPEF 108
Query: 803 APLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFH 624
+PLDSGAFK+S++G V+LQFAP G RQYDWSRKQVFSLSVTEIG+++ LGA+DSCEFFH
Sbjct: 109 SPLDSGAFKLSKEGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFH 168
Query: 623 DPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAF 444
DP KG+SDEG+VRKVL+VEPLPDGSGHFFNLSVQNKL+N+DE+IYIP+TKAEF VLVSAF
Sbjct: 169 DPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAF 228
Query: 443 NFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
NF++PYL+GWHT +S +PEDA R NNTN + GAELEW+R
Sbjct: 229 NFVMPYLLGWHTAVNSFKPEDASRSNNTNPRSGAELEWNR 268
>ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
tuberosum] gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
Full=Single-stranded DNA-binding protein WHY1,
chloroplastic; AltName: Full=DNA-binding protein p24;
AltName: Full=PR-10a binding factor 2; Short=PBF-2;
AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
Precursor gi|9651810|gb|AAF91282.1|AF233342_1
DNA-binding protein p24 [Solanum tuberosum]
Length = 274
Score = 329 bits (844), Expect = 1e-87
Identities = 155/220 (70%), Positives = 184/220 (83%)
Frame = -3
Query: 983 TLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPKAPEF 804
+L CR SDYFE Q Q+ + G PKVFVG+S+YKGKAALTVEP++PEF
Sbjct: 62 SLTCRHSDYFEPQQQQQQQQQQPQ-------GASTPKVFVGYSIYKGKAALTVEPRSPEF 114
Query: 803 APLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFH 624
+PLDSGAFK+SR+G V+LQFAP G RQYDWSRKQVFSLSVTEIG+++ LGA+DSCEFFH
Sbjct: 115 SPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFH 174
Query: 623 DPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAF 444
DP KG+SDEG+VRKVL+VEPLPDGSGHFFNLSVQNKL+N+DE+IYIP+TKAEF VLVSAF
Sbjct: 175 DPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAF 234
Query: 443 NFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
NF++PYL+GWHT +S +PEDA R NN N + GAELEW+R
Sbjct: 235 NFVMPYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWNR 274
>gb|ADL36850.1| WHY domain class transcription factor [Malus domestica]
Length = 276
Score = 329 bits (844), Expect = 1e-87
Identities = 167/275 (60%), Positives = 206/275 (74%), Gaps = 6/275 (2%)
Frame = -3
Query: 1130 IQLLLSSFVPYECSKCPSKFTKQSLIRNPNL-SLNPPFWVSENNKKKKLFTLKCRRSDYF 954
+ LL S + ++ PS+F L+ + S N + +K +LKCR+S+YF
Sbjct: 4 LHLLSSPATAQKPNQNPSQFLSSQLLSRARVFSTNTFGFAPSPILSRKRLSLKCRQSEYF 63
Query: 953 EQQDQRFSRGSSDNSFARH-----SVGGFPPKVFVGHSVYKGKAALTVEPKAPEFAPLDS 789
+QQ R S +S N + G P+ +VGHS+YKGKAALTVEPKAPEF PLDS
Sbjct: 64 DQQ--RTSTAASPNKPSPAPPTPAGATGMAPRFYVGHSIYKGKAALTVEPKAPEFTPLDS 121
Query: 788 GAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFHDPFKG 609
GAFK+SR+G+VLLQFAP G R YDWSRKQVFSLSVTEIG+L+ LG+++S EFFHDPFKG
Sbjct: 122 GAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVSLGSKESLEFFHDPFKG 181
Query: 608 KSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAFNFILP 429
KSDEGKVRKVL+VEPLPDGSGHFFNLSVQNKL+N+DESIYIPIT+AEF VL SAFNFILP
Sbjct: 182 KSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPITRAEFAVLKSAFNFILP 241
Query: 428 YLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
Y++GWH +A+SI+PED+ R NN+ + G + EWSR
Sbjct: 242 YILGWHAYANSIKPEDSSRANNSGLKYGGDFEWSR 276
>ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Populus trichocarpa]
gi|118485247|gb|ABK94483.1| unknown [Populus trichocarpa]
gi|222851421|gb|EEE88968.1| hypothetical protein
POPTR_0008s14840g [Populus trichocarpa]
Length = 265
Score = 323 bits (829), Expect = 7e-86
Identities = 154/246 (62%), Positives = 197/246 (80%)
Frame = -3
Query: 1061 SLIRNPNLSLNPPFWVSENNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGF 882
SL ++SLN + + +KKK +KC+ Y++QQ + F+ S + + VG
Sbjct: 26 SLCSTKSISLNSK---TSSTEKKKTLGVKCQ---YYDQQHKTFTTSSRSSPSSAPPVGES 79
Query: 881 PPKVFVGHSVYKGKAALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRK 702
PPKVFVGHS+YKGKAALTVEP++PEF+PLDSGA+K+ ++G+VLLQFAP RQYDW+RK
Sbjct: 80 PPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQFAPAASVRQYDWTRK 139
Query: 701 QVFSLSVTEIGTLMGLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQ 522
QVFSLSVTEIG L+ L A+ SCEFFHDP KGKSDEGKVRK+L+VEPLPDGSGHFFNLSVQ
Sbjct: 140 QVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEPLPDGSGHFFNLSVQ 199
Query: 521 NKLMNVDESIYIPITKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGA 342
NK++N+DE+IYIP+TKAE+TVL SAFN+ILPYL+GWH +A+SI+P+D+ R NN + + G
Sbjct: 200 NKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPDDSSRGNNASPRYGG 259
Query: 341 ELEWSR 324
+ EWSR
Sbjct: 260 DYEWSR 265
>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
Chain C, Structure Of The Plant Transcriptional
Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
Structure Of The Plant Transcriptional Regulator Pbf-2
Length = 227
Score = 320 bits (820), Expect = 7e-85
Identities = 151/215 (70%), Positives = 179/215 (83%)
Frame = -3
Query: 971 RRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPKAPEFAPLD 792
R SDYFE Q Q+ + G PKVFVG+S+YKGKAALTVEP++PEF+PLD
Sbjct: 12 RGSDYFEPQQQQQQQQQQPQ-------GASTPKVFVGYSIYKGKAALTVEPRSPEFSPLD 64
Query: 791 SGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFHDPFK 612
SGAFK+SR+G V+LQFAP G RQYDWSRKQVFSLSVTEIG+++ LG +DSCEFFHDP K
Sbjct: 65 SGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNK 124
Query: 611 GKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAFNFIL 432
G+SDEG+VRKVL+VEPLPDGSGHFFNLSVQNKL+N+DE+IYIP+TKAEF VLVSAFNF++
Sbjct: 125 GRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVM 184
Query: 431 PYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWS 327
PYL+GWHT +S +PEDA R NN N + GAELEW+
Sbjct: 185 PYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWN 219
>ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding protein WHY1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 270
Score = 320 bits (819), Expect = 9e-85
Identities = 156/257 (60%), Positives = 194/257 (75%), Gaps = 13/257 (5%)
Frame = -3
Query: 1055 IRNPNLSLNPPFWVSENNK----------KKKLFTLKCRRSDYFEQQDQRFSRGSSDNSF 906
++NPN S++ V N +K+ LKCR+S+YF+QQ S +
Sbjct: 14 VQNPNHSVSSKARVFSTNSFGFAPNSTSFRKRRLALKCRQSEYFDQQRLTAPNPPSTAAS 73
Query: 905 ARHSVGGF---PPKVFVGHSVYKGKAALTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPG 735
A S G P + +VGHS+YKGKAALTVEPKAPEF LDSGAFK+SR+G+VLLQFAP
Sbjct: 74 APQSPAGASAGPARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVLLQFAPA 133
Query: 734 VGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPD 555
G R YDWSRKQVFSLSVTEIG+++ LGA++SCEFFHDPFKGKS+EGKVRKVL+VEPLPD
Sbjct: 134 AGVRVYDWSRKQVFSLSVTEIGSIVSLGAKESCEFFHDPFKGKSEEGKVRKVLKVEPLPD 193
Query: 554 GSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAFNFILPYLMGWHTFADSIRPEDAG 375
GSG FFNLSVQNKL+N+DE+IYIP+T+AEF VL SAFN++LPYL+GWH + +S++PED
Sbjct: 194 GSGRFFNLSVQNKLINLDENIYIPVTRAEFAVLNSAFNYLLPYLIGWHAYVNSVKPEDMS 253
Query: 374 RLNNTNSQGGAELEWSR 324
R+NN + G + EWSR
Sbjct: 254 RVNNATPRYGGDFEWSR 270
>ref|XP_006842726.1| hypothetical protein AMTR_s00133p00020030 [Amborella trichopoda]
gi|548844840|gb|ERN04401.1| hypothetical protein
AMTR_s00133p00020030 [Amborella trichopoda]
Length = 274
Score = 318 bits (815), Expect = 3e-84
Identities = 153/223 (68%), Positives = 184/223 (82%)
Frame = -3
Query: 992 KLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPKA 813
K FTLKCRR +YFE Q +F+ +DNSF S G +V+VGHS++KGKAALT+EPKA
Sbjct: 56 KDFTLKCRRPEYFEPQ--KFTP-PADNSFNGQS-SGLSGRVYVGHSIFKGKAALTIEPKA 111
Query: 812 PEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCE 633
PEF L+SGA KV +DG +LLQFAP VG RQYDW+RKQVFSLSV EIG LM LG +D+CE
Sbjct: 112 PEFTALESGACKVVKDGSILLQFAPAVGTRQYDWNRKQVFSLSVAEIGALMSLGMKDTCE 171
Query: 632 FFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLV 453
F+HDPFKG+S+EGK+RKVL+VEPLPDGSG+FFNLSV N+ +N+D+SIYIP+TKAEF V+V
Sbjct: 172 FYHDPFKGRSEEGKIRKVLKVEPLPDGSGYFFNLSVSNRPLNIDDSIYIPVTKAEFAVIV 231
Query: 452 SAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
SAFNFILPYL+GWH FA+SIRP D +L N N + GAELEW R
Sbjct: 232 SAFNFILPYLLGWHAFAESIRPVDTSQLTNANQRRGAELEWGR 274
>ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
gi|330250525|gb|AEC05619.1| single-stranded DNA-binding
protein WHY3 [Arabidopsis thaliana]
Length = 267
Score = 317 bits (813), Expect = 5e-84
Identities = 152/220 (69%), Positives = 183/220 (83%)
Frame = -3
Query: 983 TLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPKAPEF 804
T+K R+SDYFE+Q RF SS + S P+ +VGHS+YKGKAALT+EP+APEF
Sbjct: 55 TVKSRQSDYFEKQ--RFGDSSSSQNAEVSS-----PRFYVGHSIYKGKAALTIEPRAPEF 107
Query: 803 APLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSCEFFH 624
L+SGAFK++++G++LLQFAP G RQYDWSRKQVFSLSVTEIG L+ LG R+SCEFFH
Sbjct: 108 VALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFH 167
Query: 623 DPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVLVSAF 444
DPFKGK DEGKVRKVL+VEPLPDGSG FFNLSVQNKL+NVDES+YIPITKAEF VL+SAF
Sbjct: 168 DPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAF 227
Query: 443 NFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
NF+LP+L+GW FA+SI+PED+ RLNN + + G + EWSR
Sbjct: 228 NFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 267
>gb|AFK42652.1| unknown [Lotus japonicus]
Length = 261
Score = 317 bits (812), Expect = 6e-84
Identities = 148/224 (66%), Positives = 182/224 (81%)
Frame = -3
Query: 995 KKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALTVEPK 816
K L ++CR SD F+Q+ S N A SVG PP+V+VGHS+YKGKAALTV P+
Sbjct: 39 KPLTLIRCRHSDLFDQKTFSSSTPQPANP-AAVSVGALPPRVYVGHSIYKGKAALTVTPR 97
Query: 815 APEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGARDSC 636
PEFAPLDSGAFK+SR+GYVLLQFAP + +RQYDW+RKQVFSLSV E+G+++ LG R+SC
Sbjct: 98 PPEFAPLDSGAFKISREGYVLLQFAPAIASRQYDWNRKQVFSLSVVEMGSVISLGTRESC 157
Query: 635 EFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAEFTVL 456
EFFHDP KGKSDEGKVRKVL++EPLPDGSGHFFNLSVQNK++N+DE+IYIP+TKAE VL
Sbjct: 158 EFFHDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKIVNIDENIYIPVTKAELAVL 217
Query: 455 VSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGGAELEWSR 324
S FNFI+PY +GWHTFA+S+ PE + +NN N + G + EW+R
Sbjct: 218 SSIFNFIMPYPLGWHTFANSVNPEYSSGVNNANPRYGGDYEWNR 261
>gb|EYU28713.1| hypothetical protein MIMGU_mgv1a009792mg [Mimulus guttatus]
Length = 331
Score = 316 bits (810), Expect = 1e-83
Identities = 153/229 (66%), Positives = 183/229 (79%), Gaps = 1/229 (0%)
Frame = -3
Query: 1007 NNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAALT 828
N + F +K + EQ Q+ S +S G PP+V+VG+S+YKGKAALT
Sbjct: 103 NQSRSISFNVKSQYMTPQEQNHQQQKAPPSYDSPFPSQPGQLPPRVYVGYSIYKGKAALT 162
Query: 827 VEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGLGA 648
VEP+ PEF PLDSGAFK+S++G+VLLQFAP G RQYDWSRKQVFSLSVTEIG +M LGA
Sbjct: 163 VEPRPPEFFPLDSGAFKLSKEGFVLLQFAPASGVRQYDWSRKQVFSLSVTEIGNIMSLGA 222
Query: 647 RDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITKAE 468
RDSCEFFHDP KG+SDEGKVRKVL+ EPLPDGSGHFFNLSVQNKL NVDE+IYIP+TKAE
Sbjct: 223 RDSCEFFHDPNKGRSDEGKVRKVLKAEPLPDGSGHFFNLSVQNKLTNVDENIYIPVTKAE 282
Query: 467 FTVLVSAFNFILPYLMGWHTFADSIRPEDAGRLNNTNSQGG-AELEWSR 324
F VLVS+FNF++PYL+GWHTFA+SI+PED+ R+N+ N + G + EWSR
Sbjct: 283 FAVLVSSFNFVIPYLLGWHTFANSIKPEDSNRVNSANPRSGTVDYEWSR 331
>ref|XP_002315793.2| hypothetical protein POPTR_0010s10260g [Populus trichocarpa]
gi|550329499|gb|EEF01964.2| hypothetical protein
POPTR_0010s10260g [Populus trichocarpa]
Length = 271
Score = 315 bits (807), Expect = 2e-83
Identities = 149/232 (64%), Positives = 190/232 (81%), Gaps = 2/232 (0%)
Frame = -3
Query: 1013 SENNKKKKLFTLKCRRSDYFEQQDQRFSRGSSDNSFARHSVGGFPPKVFVGHSVYKGKAA 834
+ N KKKK ++K + Y++ Q + F+ S +S + VG PPKVFVGHS+YKGKAA
Sbjct: 43 TSNTKKKKKLSVKYQ---YYDHQQKSFTSSSRPSSSSAPPVGESPPKVFVGHSIYKGKAA 99
Query: 833 LTVEPKAPEFAPLDSGAFKVSRDGYVLLQFAPGVGARQYDWSRKQVFSLSVTEIGTLMGL 654
LT+EP+APEF+PL+SGA+K+ ++G+VL QFAP ARQYDW+RKQVFSLSVTEIG L+ L
Sbjct: 100 LTIEPRAPEFSPLESGAYKLVKEGFVLSQFAPASSARQYDWTRKQVFSLSVTEIGHLVSL 159
Query: 653 GARDSCEFFHDPFKGKSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLMNVDESIYIPITK 474
GARDSCEFFHDP KG+S+EGKVRKVL+VEPLPDGSGHFFNLSVQNK +N+DESIYIP+T+
Sbjct: 160 GARDSCEFFHDPNKGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKALNIDESIYIPVTR 219
Query: 473 AEFTVLVSAFNFILPYLMGWHTF--ADSIRPEDAGRLNNTNSQGGAELEWSR 324
AE+TVL+SAFN+ILPYL+GWH + A+SI+ D+ R NN N + G + +W+R
Sbjct: 220 AEYTVLISAFNYILPYLLGWHAYANANSIKSADSSRENNVNPRYGGDYDWNR 271