BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00007477
         (675 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   360   2e-97
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       358   7e-97
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   351   1e-94
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   348   7e-94
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   348   7e-94
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       348   7e-94
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   346   3e-93
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...   346   4e-93
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   345   1e-92
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   344   1e-92
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   344   1e-92
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun...   343   2e-92
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   343   2e-92
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   343   3e-92
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      343   3e-92
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   343   4e-92
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...   342   6e-92
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   340   2e-91
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      340   2e-91
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   340   2e-91

>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  360 bits (925), Expect = 2e-97
 Identities = 168/223 (75%), Positives = 192/223 (86%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG+RPHPNECSGSDLDGDIYFVCWD ELIPP+Q+ PMDYTPA S+ LDHDV IE+
Sbjct: 800  VVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIED 859

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYFTNY++NDSLGIIAN+HT FAD+EP  A S  C++LA  FS+AVDFPKTGVPA IP
Sbjct: 860  VEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIP 919

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
            PHL+VKEYPDFM+K DKP+Y+SQ VIGKLFR VKDIAP  +CI  FT EVA++ YD DME
Sbjct: 920  PHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDME 979

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFED+IDDA   KG YD+KLGNLMDYYGIKTEAE++  SI+
Sbjct: 980  VDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIM 1022


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  358 bits (920), Expect = 7e-97
 Identities = 169/223 (75%), Positives = 192/223 (86%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP +Q +PMDY+PA +  LDHDV IEE
Sbjct: 797  VVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVRIEE 856

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            V+EYFTNY++NDSLGIIAN+HTAFADKEP  A S +CIELARLFS+AVDFPKTGVPA IP
Sbjct: 857  VQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPAVIP 916

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
              L+VKEYPDFM+K++KP+Y+SQ VIGKLFREVKDIAP    +  FT EVA + YD DME
Sbjct: 917  QELYVKEYPDFMEKLNKPTYESQNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDPDME 976

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
            YDGFEDYIDDAF  K  YD+KLGNL+DYYGIK+EAE+IG SI+
Sbjct: 977  YDGFEDYIDDAFYYKSNYDYKLGNLLDYYGIKSEAEIIGGSIM 1019


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  351 bits (900), Expect = 1e-94
 Identities = 166/223 (74%), Positives = 187/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP +Q  PMDYTP   + LDHDVTIEE
Sbjct: 796  VVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEE 855

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYFTNY++NDSLG+IAN+HTA ADKE   A S  C+ELAR FS+AVDFPKTGVPA IP
Sbjct: 856  VEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIP 915

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             +L  +EYPDFM+K DKPSY+S+ VIGKLFREVKDIAP+ + I  FT +VA+QCYD DME
Sbjct: 916  SNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDME 975

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFEDYIDDAF  K  YD+KLGNLM+YYGIKTEAEL+  S +
Sbjct: 976  VDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFM 1018


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  348 bits (894), Expect = 7e-94
 Identities = 166/223 (74%), Positives = 188/223 (84%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG+RPHPNECSGSDLDGDIYFVCWD ELIPPR ++PMDYTP  +  LDHDVTIEE
Sbjct: 780  VVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEE 839

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NY++NDSLGIIAN+HTAFADKEP  A S+ CIELAR FSVAVDFPKTGV A IP
Sbjct: 840  VEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIP 899

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HLHVKEYPDFM+K DKP+Y+S+ VIGKLFREVK+ AP    I  FT +VA + YD DME
Sbjct: 900  QHLHVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDME 959

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFE+Y+D+AF+ K  YDFKLGNLMDYYGIKTEAE++   I+
Sbjct: 960  VDGFEEYVDEAFHYKANYDFKLGNLMDYYGIKTEAEILSGGIM 1002


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  348 bits (894), Expect = 7e-94
 Identities = 166/223 (74%), Positives = 188/223 (84%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG+RPHPNECSGSDLDGDIYFVCWD ELIPPR ++PMDYTP  +  LDHDVTIEE
Sbjct: 770  VVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEE 829

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NY++NDSLGIIAN+HTAFADKEP  A S+ CIELAR FSVAVDFPKTGV A IP
Sbjct: 830  VEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIP 889

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HLHVKEYPDFM+K DKP+Y+S+ VIGKLFREVK+ AP    I  FT +VA + YD DME
Sbjct: 890  QHLHVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDME 949

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFE+Y+D+AF+ K  YDFKLGNLMDYYGIKTEAE++   I+
Sbjct: 950  VDGFEEYVDEAFHYKANYDFKLGNLMDYYGIKTEAEILSGGIM 992


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  348 bits (894), Expect = 7e-94
 Identities = 164/223 (73%), Positives = 188/223 (84%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPPRQ QPMDYTPA S+ LDHDVTIEE
Sbjct: 476  VVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEE 535

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYFTNYM+ND LG+IAN+H  FAD+EP MA S+ CIELA+LFS+AVDFPKTGVPA IP
Sbjct: 536  VEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIP 595

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
              L  KEYPDFM+K DK +Y S++VIGKLFREVKD   +A+ I  FT +VA++ YD+D+E
Sbjct: 596  SQLRPKEYPDFMEKPDKTTYHSEKVIGKLFREVKDKTTQASSITTFTRDVARRSYDTDLE 655

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFEDYID+AF+ K  YD KLGNLMDYYGIKTEAE +   I+
Sbjct: 656  VDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGIM 698


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  346 bits (888), Expect = 3e-93
 Identities = 165/223 (73%), Positives = 188/223 (84%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG+RPHPNECSGSDLDGDIYFVCWD ELIPPR ++PMDYTP  +  LDHDVTIEE
Sbjct: 780  VVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEE 839

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NY++NDSLGIIAN+HTAFADKEP  A S+ CIELAR FSVAVDFPKTGV A IP
Sbjct: 840  VEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIP 899

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HL+VKEYPDFM+K DKP+Y+S+ VIGKLFREVK+ AP    I  FT +VA + YD DME
Sbjct: 900  QHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDME 959

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFE+Y+D+AF+ K  YDFKLGNLMDYYGIKTEAE++   I+
Sbjct: 960  VDGFEEYVDEAFHYKANYDFKLGNLMDYYGIKTEAEILSGGIM 1002


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
            gi|557094740|gb|ESQ35322.1| hypothetical protein
            EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score =  346 bits (887), Expect = 4e-93
 Identities = 163/223 (73%), Positives = 188/223 (84%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            V+FPQKG+RPHPNECSGSDLDGDIYFVCWDPELIPP  ++PMDYTP  +  LDHDVTIEE
Sbjct: 778  VIFPQKGLRPHPNECSGSDLDGDIYFVCWDPELIPPETSEPMDYTPEPAQILDHDVTIEE 837

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            +EEYFTNY++NDSLGIIAN+HTAFADKEP  A S+ CIELAR FS+AVDFPKTGV A IP
Sbjct: 838  IEEYFTNYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSIAVDFPKTGVAAEIP 897

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HL+VKEYPDFM+K DKP+Y+S+ VIGKLFREVK+ AP    I  FT +VA + YD DME
Sbjct: 898  QHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKTYDQDME 957

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
              GFE+YID+AF  KG YD+KLGNLMDYYGIKTEAE++   I+
Sbjct: 958  VYGFEEYIDEAFYHKGNYDYKLGNLMDYYGIKTEAEVLSGGIM 1000


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  345 bits (884), Expect = 1e-92
 Identities = 160/224 (71%), Positives = 188/224 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIPP+Q QPMDYTPA  + +D DVTIEE
Sbjct: 785  VVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVTIEE 844

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NY++NDSLGIIAN+HT FAD +   A S+ C++LA+LFS+AVDFPKTGVPA IP
Sbjct: 845  VEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPAEIP 904

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
            P L+ KEYPDFM+K DK +Y S  VIG+LFREVKDIAP  + I  FT +VA +CYD DME
Sbjct: 905  PELYAKEYPDFMEKPDKRTYISHNVIGQLFREVKDIAPHDSSIASFTRQVATKCYDPDME 964

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSIIS 4
             DGFEDY++DAF  KG YD+KLGN++DYYGIKTEAE++  SI++
Sbjct: 965  VDGFEDYLEDAFYHKGNYDYKLGNMLDYYGIKTEAEILSGSIMT 1008


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  344 bits (883), Expect = 1e-92
 Identities = 162/223 (72%), Positives = 187/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG+RPHPNECSGSDLDGDIYFVCWD EL+PPR ++PMDYTP  +  LDHDVTIEE
Sbjct: 779  VVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEE 838

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NY++NDSLGIIAN+HTAFADKEP  A S+ CIELA+ FS AVDFPKTGV A IP
Sbjct: 839  VEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIP 898

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HL+VKEYPDFM+K DKP+Y+S+ VIGKLFREVK+ AP    I  FT +VA + YD DME
Sbjct: 899  QHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDME 958

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFE+Y+D+AF +K  YDFKLGNLMDYYGIKTEAE++   I+
Sbjct: 959  VDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1001


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
            gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
            Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
            AltName: Full=RNA-directed RNA polymerase 1
            gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
            [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
            putative RNA-directed RNA polymerase [Arabidopsis
            thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
            polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  344 bits (883), Expect = 1e-92
 Identities = 162/223 (72%), Positives = 187/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG+RPHPNECSGSDLDGDIYFVCWD EL+PPR ++PMDYTP  +  LDHDVTIEE
Sbjct: 779  VVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEE 838

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NY++NDSLGIIAN+HTAFADKEP  A S+ CIELA+ FS AVDFPKTGV A IP
Sbjct: 839  VEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIP 898

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HL+VKEYPDFM+K DKP+Y+S+ VIGKLFREVK+ AP    I  FT +VA + YD DME
Sbjct: 899  QHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDME 958

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFE+Y+D+AF +K  YDFKLGNLMDYYGIKTEAE++   I+
Sbjct: 959  VDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1001


>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
            gi|462422197|gb|EMJ26460.1| hypothetical protein
            PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score =  343 bits (881), Expect = 2e-92
 Identities = 164/223 (73%), Positives = 185/223 (82%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP RQ QPMDYTPA ++ LDH VTIEE
Sbjct: 472  VVFPQKGPRPHPNECSGSDLDGDIYFVCWDDELIPSRQIQPMDYTPAPTIALDHAVTIEE 531

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NYM+NDSLGIIAN+HTAFAD++P  A S  CIELA+LFS+AVDFPKTGVPA IP
Sbjct: 532  VEEYFVNYMVNDSLGIIANAHTAFADRQPSKAMSKPCIELAKLFSIAVDFPKTGVPAIIP 591

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HL VKE+PDFM+K DKP+YQS  VIG+LFREVKD+ P    I  F+ EVA+Q YD DME
Sbjct: 592  QHLRVKEFPDFMEKPDKPTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDRDME 651

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFEDYI+DAF  K  YD  LGNL+DYYGIKTEAE++  S++
Sbjct: 652  VDGFEDYIEDAFYYKSNYDSILGNLLDYYGIKTEAEILSGSVM 694


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  343 bits (881), Expect = 2e-92
 Identities = 164/223 (73%), Positives = 188/223 (84%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPPRQ QPM+Y PA S+ LDHDVTIEE
Sbjct: 783  VVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEE 842

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYFTNY++NDSLGIIAN+H  FAD+EP MA S+ C +LA LFS+AVDFPKTGVPA IP
Sbjct: 843  VEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIP 902

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
              L  KEYPDFMDK DK SY S+RVIGKLFR+VKD AP+A+ I  FT +VA++ YD+DME
Sbjct: 903  SQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDVARRSYDADME 962

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFEDYID+AF+ K  YD KLGNLMDYYGIKTEAE++   I+
Sbjct: 963  VDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIM 1005


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  343 bits (880), Expect = 3e-92
 Identities = 161/223 (72%), Positives = 187/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWDP+L+PPRQ QPMDYTPA S  LDHDVTIEE
Sbjct: 786  VVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEE 845

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYFTNY++NDSLGIIAN+H  FAD+EP MA S+ C +LA+LFS+AVDFPKTGVPA IP
Sbjct: 846  VEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIP 905

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
              L  KEYPDFM+K DKP+Y S++VIGKLF++VKD  P+A+ I  FT +VA++ YD DM 
Sbjct: 906  SQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDGDMI 965

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             +GFEDYID+AF  K  YD KLGNLMDYYGIKTEAE++   I+
Sbjct: 966  VNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIM 1008


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  343 bits (880), Expect = 3e-92
 Identities = 160/223 (71%), Positives = 187/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP +Q  PMDY+PA++  LDH+VTIEE
Sbjct: 774  VVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEE 833

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            +EEYFTNY++NDSLGII+N+HTAFAD+EP  A S  C+ELA+LFS+AVDFPKTGVPA IP
Sbjct: 834  IEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIP 893

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
              L VKEYPDFM+K DKPSYQS  VIGKLFREVK++AP    I   T E  ++ YD DME
Sbjct: 894  QELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDME 953

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             +GFEDYIDDAF  K +YD+KLGNLMDYYG+KTEAE++G  I+
Sbjct: 954  VEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIM 996


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  343 bits (879), Expect = 4e-92
 Identities = 161/225 (71%), Positives = 188/225 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFP+KG RPHPNECSGSDLDGD YFVCWDPELIPP Q  PM Y PA +  LDH+VTIEE
Sbjct: 779  VVFPRKGRRPHPNECSGSDLDGDRYFVCWDPELIPPNQESPMTYNPAPNTLLDHNVTIEE 838

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYFTNY++NDSLGIIAN+HTAFADKE   A S+ C+ELA+LFSVAVDFPKTG+PA IP
Sbjct: 839  VEEYFTNYIVNDSLGIIANAHTAFADKERDGALSSPCLELAQLFSVAVDFPKTGIPAEIP 898

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
            PHL VKEYPDFMDK DK +Y S+R+IGKL+R+VKDIAP A  +  FT EVA + YD+DME
Sbjct: 899  PHLRVKEYPDFMDKPDKTTYTSERIIGKLYRQVKDIAPHAASLGSFTMEVAMRSYDTDME 958

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSIIST 1
             +GF +YID+AF  K  YD+KLGN+MDYYGIKTEAE++  +I+ T
Sbjct: 959  VEGFREYIDEAFEFKTEYDYKLGNMMDYYGIKTEAEILSGAIMKT 1003


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
            gi|482575337|gb|EOA39524.1| hypothetical protein
            CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score =  342 bits (877), Expect = 6e-92
 Identities = 162/223 (72%), Positives = 187/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYF+CWD ELIPPR ++PMDYTP  +  LDHDVTIEE
Sbjct: 779  VVFPQKGSRPHPNECSGSDLDGDIYFICWDHELIPPRTSEPMDYTPEPAQILDHDVTIEE 838

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VEEYF NY++NDSLGIIAN+HTAFADKEP  A S+ CIELAR FS+AVDFPKTG+ A IP
Sbjct: 839  VEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSIAVDFPKTGIAAEIP 898

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HL+VKEYPDFMDK DKP+Y+S+ VIGKLFREVK+ AP    I  FT +VA + YD DME
Sbjct: 899  QHLYVKEYPDFMDKPDKPTYESKNVIGKLFREVKERAPPLISIRSFTLDVALKSYDKDME 958

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             +GFE+YID+AF  KG YD++LGNLMDYYGIKTEAE++   I+
Sbjct: 959  VEGFEEYIDEAFFHKGNYDYRLGNLMDYYGIKTEAEILSGGIM 1001


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
            1a [Cucumis sativus]
          Length = 1130

 Score =  340 bits (873), Expect = 2e-91
 Identities = 160/223 (71%), Positives = 187/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP RQ  PMDYTPA    LD DVT E+
Sbjct: 793  VVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPAPPNELDRDVTTED 852

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            ++EYF NYM+NDSLGIIAN+HTAFADKE   A S+ C+ELA+LFSVAVDFPKTGVPA IP
Sbjct: 853  IQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFSVAVDFPKTGVPAIIP 912

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
             HL+VKE+PDFM+K D+PSY+S +VIGKLFR VKDIAP  + I  FT +VA++CYD DME
Sbjct: 913  SHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDME 972

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             +GFEDY++DAF  K  YD+KLGNL+DYYGIK+EAE++  SI+
Sbjct: 973  VEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIM 1015


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  340 bits (873), Expect = 2e-91
 Identities = 159/223 (71%), Positives = 186/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP +Q  PMDY+PA++  LDH+VTIEE
Sbjct: 774  VVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEE 833

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            +EEYFTNY++NDSLGII+N+HTAFAD+EPG A S  C+ELA+LFS+AVDFPKTGVPA IP
Sbjct: 834  IEEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIP 893

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
              L VKE+PDFM+K DKPSYQS  VIGKLFREVK++AP    I   T E  K+ YD DME
Sbjct: 894  QELRVKEFPDFMEKPDKPSYQSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDME 953

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             +GF DYIDDAF  K +YD+KLGNLMDYYG+KTEAE++   I+
Sbjct: 954  VEGFVDYIDDAFFYKSKYDYKLGNLMDYYGVKTEAEILSGGIM 996


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  340 bits (872), Expect = 2e-91
 Identities = 160/223 (71%), Positives = 186/223 (83%)
 Frame = -1

Query: 675  VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 496
            VVFP+ G RPHPNECSGSDLDGDIYFVCWD +LIP +Q +PMDY PA +  LDHDVTIEE
Sbjct: 782  VVFPKNGKRPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHDVTIEE 841

Query: 495  VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 316
            VE+YFTNY++NDSLGIIAN+HT FADKEP MA S  C+ELARLFS+AVDF KTG+PA IP
Sbjct: 842  VEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFNKTGIPAEIP 901

Query: 315  PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 136
            PHL VKEYPDFM+K DK +Y S RVIGKLFREVKDIAP+ +    FT EVA++ YD DME
Sbjct: 902  PHLRVKEYPDFMEKPDKINYASSRVIGKLFREVKDIAPQTSSFRSFTKEVARRSYDPDME 961

Query: 135  YDGFEDYIDDAFNKKGRYDFKLGNLMDYYGIKTEAELIGKSII 7
             DGFED+ID+AF  K  YD+KLGNLM+YYG+KTEAE++   I+
Sbjct: 962  VDGFEDHIDEAFLHKTEYDYKLGNLMEYYGVKTEAEVLSGGIM 1004