BLASTX nr result
ID: Cocculus23_contig00007238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00007238
(616 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat... 215 9e-54
ref|XP_007150636.1| hypothetical protein PHAVU_005G169000g [Phas... 214 1e-53
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ... 212 8e-53
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi... 212 8e-53
emb|CBI36131.3| unnamed protein product [Vitis vinifera] 212 8e-53
ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containi... 210 3e-52
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi... 208 1e-51
ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containi... 206 6e-51
ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat... 204 1e-50
ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, part... 197 2e-48
ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containi... 197 3e-48
ref|XP_002516017.1| pentatricopeptide repeat-containing protein,... 193 3e-47
gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis] 188 1e-45
gb|EYU20172.1| hypothetical protein MIMGU_mgv11b016157mg [Mimulu... 181 1e-43
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37
ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [S... 160 4e-37
tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea m... 159 8e-37
ref|XP_004965520.1| PREDICTED: pentatricopeptide repeat-containi... 158 1e-36
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare] 154 2e-35
ref|XP_006389523.1| pentatricopeptide repeat-containing family p... 150 3e-34
>ref|XP_003546945.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 640
Score = 215 bits (547), Expect = 9e-54
Identities = 100/151 (66%), Positives = 121/151 (80%)
Frame = -3
Query: 488 HYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRI 309
+Y SLL+S I KA+EPGKQLHA G+AY+ +ATKL+N YSVCNSL NA +FD+I
Sbjct: 69 YYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKI 128
Query: 308 TPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQ 129
N+FLWN+LIRA+AWNGPH AISLYHQ+L YGL+PDNFT PFVLKACSALS + +
Sbjct: 129 PKG--NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGE 186
Query: 128 GQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
G++IH+ + R GWE DVFVGAAL+DMYAKCG
Sbjct: 187 GRVIHERVIRSGWERDVFVGAALVDMYAKCG 217
Score = 74.7 bits (182), Expect = 2e-11
Identities = 44/140 (31%), Positives = 76/140 (54%)
Frame = -3
Query: 446 IEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNILI 267
I G+ +H + +G + L+++Y+ C + +AR VFD+I + LWN ++
Sbjct: 184 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDR--DAVLWNSML 241
Query: 266 RAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGWE 87
A+A NG ++SL ++ G++P T V+ + + ++ L G+ IH R G++
Sbjct: 242 AAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQ 301
Query: 86 SDVFVGAALIDMYAKCGTNK 27
+ V ALIDMYAKCG+ K
Sbjct: 302 YNDKVKTALIDMYAKCGSVK 321
Score = 63.5 bits (153), Expect = 5e-08
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Frame = -3
Query: 479 SLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPN 300
+++ S D + G+++H +G Y+ + T L+++Y+ C S+ A ++F+R+
Sbjct: 274 TVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERL--R 331
Query: 299 HNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
+ WN +I +A +G A+ L+ +++ QPD+ TF L ACS L +G+
Sbjct: 332 EKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRA 390
Query: 119 IHQDITR-LGWESDVFVGAALIDMYAKCG 36
++ + R V ++D+ CG
Sbjct: 391 LYNLMVRDCRINPTVEHYTCMVDLLGHCG 419
>ref|XP_007150636.1| hypothetical protein PHAVU_005G169000g [Phaseolus vulgaris]
gi|561023900|gb|ESW22630.1| hypothetical protein
PHAVU_005G169000g [Phaseolus vulgaris]
Length = 631
Score = 214 bits (546), Expect = 1e-53
Identities = 102/156 (65%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
Frame = -3
Query: 497 PISHY--TSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARL 324
P +HY SLL+S I KA+ PGKQLHA G+AY+ +ATKL+N YSVCNSL NA
Sbjct: 55 PSNHYCYASLLESCISLKALRPGKQLHARLCQLGIAYNQDLATKLVNFYSVCNSLRNAHQ 114
Query: 323 VFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSAL 144
+FD+I N+FLWN+LIRA+AWNGPH VAISLYHQ+L YGL+PDNFT PFVLKACSAL
Sbjct: 115 LFDQIPKG--NLFLWNVLIRAYAWNGPHEVAISLYHQMLEYGLKPDNFTLPFVLKACSAL 172
Query: 143 SALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
S + +G++IH+ + R GWE DVFVGAAL+DMYAKCG
Sbjct: 173 STIGEGRIIHERVIRTGWERDVFVGAALVDMYAKCG 208
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/138 (30%), Positives = 74/138 (53%)
Frame = -3
Query: 446 IEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNILI 267
I G+ +H + G + L+++Y+ C + +AR VFD+I + LWN ++
Sbjct: 175 IGEGRIIHERVIRTGWERDVFVGAALVDMYAKCGCVVDARHVFDKIA--ERDAVLWNSML 232
Query: 266 RAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGWE 87
A++ NG ++SL ++ ++P T V+ + + ++ L G+ IH R G++
Sbjct: 233 AAYSQNGHPDESLSLCREMAATSVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQ 292
Query: 86 SDVFVGAALIDMYAKCGT 33
S+ V ALIDMYAKCG+
Sbjct: 293 SNDKVKTALIDMYAKCGS 310
Score = 60.1 bits (144), Expect = 5e-07
Identities = 33/127 (25%), Positives = 66/127 (51%)
Frame = -3
Query: 479 SLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPN 300
+++ S D + G+++H +G + + T L+++Y+ C S+ A ++F+R+
Sbjct: 265 TVISSSADIACLPHGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVEVACILFERL--R 322
Query: 299 HNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
+ WN +I +A +G A+ L+ ++ QPD+ TF VL ACS L +G+
Sbjct: 323 EKRVVSWNAIITGYAMHGLVVEALDLFERMREEA-QPDHITFVGVLAACSRGRLLDEGRA 381
Query: 119 IHQDITR 99
++ + R
Sbjct: 382 LYNLMVR 388
>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 212 bits (539), Expect = 8e-53
Identities = 104/164 (63%), Positives = 127/164 (77%), Gaps = 2/164 (1%)
Frame = -3
Query: 503 PLPISHY--TSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNA 330
P P +HY TSLLQS ID KA+ PGKQLHA F G+AY+ +ATKL++LY+V NSL NA
Sbjct: 42 PQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNA 101
Query: 329 RLVFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACS 150
R +FD+I N+FLWN+LIR +AWNGPH AI LYH++L YGL+PDNFT PFVLKACS
Sbjct: 102 RNLFDKIPKQ--NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACS 159
Query: 149 ALSALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCGTNKDVG 18
ALSA+ +G+ IH+ + + GWE D+FVGAALIDMYAKCG D G
Sbjct: 160 ALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAG 203
Score = 79.0 bits (193), Expect = 1e-12
Identities = 46/141 (32%), Positives = 78/141 (55%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
AI G+ +H + + +G + L+++Y+ C + +A VFD+I + LWN +
Sbjct: 163 AIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR--DAVLWNSM 220
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
+ A+A NG +ISL ++ G++P T V+ + + ++ L G+ IH R G+
Sbjct: 221 LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGF 280
Query: 89 ESDVFVGAALIDMYAKCGTNK 27
+S+ V ALIDMYAKCG+ K
Sbjct: 281 QSNDKVKTALIDMYAKCGSVK 301
Score = 59.7 bits (143), Expect = 7e-07
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = -3
Query: 479 SLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPN 300
+++ S D + G+++H +G + + T L+++Y+ C S+ A +F+R+
Sbjct: 254 TVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERL--R 311
Query: 299 HNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
+ WN +I +A +G A+ L+ ++ +PD+ TF VL ACS L +G+
Sbjct: 312 EKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRA 370
Query: 119 IHQDITR-LGWESDVFVGAALIDMYAKCG 36
++ + R G V +ID+ CG
Sbjct: 371 LYNLMVRDYGITPTVQHYTCMIDLLGHCG 399
>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 212 bits (539), Expect = 8e-53
Identities = 103/152 (67%), Positives = 122/152 (80%)
Frame = -3
Query: 491 SHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDR 312
S+Y SLLQS I KAI+PGKQLHA L G + T IATKL+NLY VC+SLS+ARL+FDR
Sbjct: 76 SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 311 ITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALH 132
I P HN IFLWN+LIR +AWNGP+ A+ LY+Q+ YGL PDNFTFPFVLKAC+ALSA+
Sbjct: 136 I-PKHN-IFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIE 193
Query: 131 QGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
G+ IH+ + + GWE DVFVGAALIDMYAKCG
Sbjct: 194 HGREIHEHVVQTGWEKDVFVGAALIDMYAKCG 225
Score = 84.3 bits (207), Expect = 2e-14
Identities = 48/148 (32%), Positives = 81/148 (54%)
Frame = -3
Query: 476 LLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNH 297
+L++ AIE G+++H H + G + L+++Y+ C + +AR VFD+I
Sbjct: 182 VLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR- 240
Query: 296 NNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLI 117
+ LWN ++ A++ NG +SL +++ GL+P T + A + +AL QG+ +
Sbjct: 241 -DAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGREL 299
Query: 116 HQDITRLGWESDVFVGAALIDMYAKCGT 33
H R +ES V AL+DMYAKCG+
Sbjct: 300 HGLSWRQEFESHDKVKTALVDMYAKCGS 327
Score = 59.3 bits (142), Expect = 9e-07
Identities = 34/120 (28%), Positives = 61/120 (50%)
Frame = -3
Query: 458 DCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLW 279
D A+ G++LH H + T L+++Y+ C S+ AR +F+R+ + W
Sbjct: 289 DNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERL--GVKRVVSW 346
Query: 278 NILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITR 99
N +I +A +G + A+ L+ ++ +PD+ TF VL ACS L +G + + + R
Sbjct: 347 NAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIR 405
>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 212 bits (539), Expect = 8e-53
Identities = 103/152 (67%), Positives = 122/152 (80%)
Frame = -3
Query: 491 SHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDR 312
S+Y SLLQS I KAI+PGKQLHA L G + T IATKL+NLY VC+SLS+ARL+FDR
Sbjct: 76 SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 311 ITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALH 132
I P HN IFLWN+LIR +AWNGP+ A+ LY+Q+ YGL PDNFTFPFVLKAC+ALSA+
Sbjct: 136 I-PKHN-IFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIE 193
Query: 131 QGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
G+ IH+ + + GWE DVFVGAALIDMYAKCG
Sbjct: 194 HGREIHEHVVQTGWEKDVFVGAALIDMYAKCG 225
Score = 64.3 bits (155), Expect = 3e-08
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = -3
Query: 476 LLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNH 297
+L++ AIE G+++H H + G + L+++Y+ C + +AR VFD+I
Sbjct: 182 VLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRD 241
Query: 296 NNIFL-WNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
+ + WN +I +A +G + A+ L+ ++ +PD+ TF VL ACS L +G +
Sbjct: 242 AVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWM 300
Query: 119 IHQDITR 99
+ + R
Sbjct: 301 FFETMIR 307
>ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Solanum tuberosum]
Length = 602
Score = 210 bits (534), Expect = 3e-52
Identities = 102/154 (66%), Positives = 118/154 (76%)
Frame = -3
Query: 497 PISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVF 318
P HY SLLQS I KA+EPGKQLHAH L GL Y+ +ATKL+NLYSVC+ L NA +F
Sbjct: 28 PTQHYASLLQSCIGRKAVEPGKQLHAHLCLTGLGYNINLATKLVNLYSVCDKLPNAHHLF 87
Query: 317 DRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSA 138
DRI NIFLWN+LIR +AWNGP+ AISLY+Q++ YG PDNFTFPFVLKACSALSA
Sbjct: 88 DRIPKG--NIFLWNVLIRGYAWNGPYEAAISLYYQMIDYGHVPDNFTFPFVLKACSALSA 145
Query: 137 LHQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+ G+ IH+ R W+ DVFVGAALIDMYAKCG
Sbjct: 146 IEVGKDIHEYAKRTKWDKDVFVGAALIDMYAKCG 179
Score = 68.2 bits (165), Expect = 2e-09
Identities = 40/141 (28%), Positives = 72/141 (51%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
AIE GK +H + + L+++Y+ C + +R VF+ + ++ +WN +
Sbjct: 145 AIEVGKDIHEYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFEDVV--ERDVVVWNSM 202
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
+ A++ NG + L ++ G++P T + A + ++AL QG +H R G+
Sbjct: 203 LAAYSQNGHPEDCLDLCGEMACGGVRPTEATLVTAISASADVAALRQGMELHGYSWRQGF 262
Query: 89 ESDVFVGAALIDMYAKCGTNK 27
+S V AL+DMYAK G+ K
Sbjct: 263 DSLDKVKTALVDMYAKSGSVK 283
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = -3
Query: 458 DCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLW 279
D A+ G +LH + G + T L+++Y+ S+ AR++F+ + + W
Sbjct: 243 DVAALRQGMELHGYSWRQGFDSLDKVKTALVDMYAKSGSVKVARILFEGL--QEKRVVSW 300
Query: 278 NILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITR 99
N +I +A +G + A+ L+++++ +PD+ TF VL AC+ L +G++ + +
Sbjct: 301 NAMITGYAMHGHANAALGLFNEMVGKA-KPDHITFVGVLSACNHGGLLSEGRMYFDSMAK 359
Query: 98 -LGWESDVFVGAALIDMYAKCG 36
G E + ++D+ G
Sbjct: 360 DYGIEPTIQHTTCMVDLLGHSG 381
>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 208 bits (529), Expect = 1e-51
Identities = 99/153 (64%), Positives = 125/153 (81%)
Frame = -3
Query: 494 ISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFD 315
+S+Y SLLQS + KAIEPGKQLHA G++++ +ATKL+NLY +CNSL+NA L+FD
Sbjct: 1 MSYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFD 60
Query: 314 RITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSAL 135
RI+ N+FLWN++IR +AWNGP+ +AISLY+Q+ YGL PD FTFPFVLKACSALSA+
Sbjct: 61 RISKR--NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAM 118
Query: 134 HQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+G+ IH+D+ R G ESDVFVGAALIDMYAKCG
Sbjct: 119 EEGKKIHKDVIRSGLESDVFVGAALIDMYAKCG 151
Score = 79.7 bits (195), Expect = 6e-13
Identities = 44/139 (31%), Positives = 77/139 (55%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
A+E GK++H + +GL + L+++Y+ C + +AR VFD+I + ++ WN +
Sbjct: 117 AMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKI--DERDVVCWNSM 174
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
+ ++ NG +++L + GL+P TF + A + L QG+ +H R G+
Sbjct: 175 LATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGF 234
Query: 89 ESDVFVGAALIDMYAKCGT 33
ES+ V AL+DMYAK G+
Sbjct: 235 ESNDKVKTALMDMYAKSGS 253
Score = 55.8 bits (133), Expect = 9e-06
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Frame = -3
Query: 437 GKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNILIRAF 258
GK+LH + +G + + T L+++Y+ S++ AR +F+ + + WN +I +
Sbjct: 222 GKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELL--EEKRVVSWNAMITGY 279
Query: 257 AWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL-IHQDITRLGWESD 81
A +G + A+ L+ ++ L PD+ TF VL ACS L++G++ I+
Sbjct: 280 AMHGHANEALDLFKEMKGKVL-PDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPT 338
Query: 80 VFVGAALIDMYAKCG 36
V +ID+ CG
Sbjct: 339 VQHYTCMIDLLGHCG 353
>ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 606
Score = 206 bits (523), Expect = 6e-51
Identities = 100/151 (66%), Positives = 115/151 (76%)
Frame = -3
Query: 488 HYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRI 309
HY SLLQS I KA++PGKQLHAH L GL Y+ +ATKL+NLY VC+ L NA +FDRI
Sbjct: 35 HYASLLQSCIARKAVQPGKQLHAHLCLTGLGYNINLATKLVNLYCVCDKLPNAHHLFDRI 94
Query: 308 TPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQ 129
NIFLWN+LIR +AWNGP+ AISLYHQ++ YG PDNFTFPFVLKACSALSA+
Sbjct: 95 PKG--NIFLWNVLIRGYAWNGPYEAAISLYHQMIDYGHVPDNFTFPFVLKACSALSAIEV 152
Query: 128 GQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
G+ IH R W+ DVFVGAALIDMYAKCG
Sbjct: 153 GKDIHDYAKRTKWDKDVFVGAALIDMYAKCG 183
Score = 69.7 bits (169), Expect = 6e-10
Identities = 40/141 (28%), Positives = 74/141 (52%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
AIE GK +H + + L+++Y+ C + +R VF+ + ++ +WN +
Sbjct: 149 AIEVGKDIHDYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFENVV--ERDVVVWNSM 206
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
+ A++ NG ++L ++ G++P T + A + ++AL QG+ +H R G+
Sbjct: 207 LAAYSQNGHPEDCLALCGEMACGGIRPTEATLVTAISASADVAALRQGRELHGYSWRQGF 266
Query: 89 ESDVFVGAALIDMYAKCGTNK 27
+S V AL+DMYAK G+ K
Sbjct: 267 DSLDKVKTALVDMYAKSGSVK 287
Score = 58.5 bits (140), Expect = 1e-06
Identities = 34/142 (23%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = -3
Query: 458 DCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLW 279
D A+ G++LH + G + T L+++Y+ S+ AR++F+ + + W
Sbjct: 247 DVAALRQGRELHGYSWRQGFDSLDKVKTALVDMYAKSGSVKVARILFEGL--QEKRVVSW 304
Query: 278 NILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITR 99
N +I +A +G + A+ L+++++ +PD+ TF VL AC+ L +G++ + +
Sbjct: 305 NAMITGYAMHGHANAALCLFNEMVGKA-KPDHITFVGVLSACNHGGLLSEGRMYFDSMAK 363
Query: 98 -LGWESDVFVGAALIDMYAKCG 36
G E + ++D+ G
Sbjct: 364 DYGIEPTIQHTTCMVDLLGHSG 385
>ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cicer arietinum]
Length = 615
Score = 204 bits (520), Expect = 1e-50
Identities = 100/150 (66%), Positives = 118/150 (78%)
Frame = -3
Query: 485 YTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRIT 306
YTSLLQS I KA+ PGKQLHAHF GL Y+ +ATKL++LYSV NSL NA +FD+I
Sbjct: 45 YTSLLQSCIASKALNPGKQLHAHFCHLGLPYNQNLATKLVHLYSVSNSLINAHNLFDKIP 104
Query: 305 PNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQG 126
N+FLWN+LIR +AWNGPH AISLYH +L Y L+PDNFT PFVLKACSALSA+ +G
Sbjct: 105 KG--NLFLWNVLIRGYAWNGPHDAAISLYHDMLDYELKPDNFTLPFVLKACSALSAVGEG 162
Query: 125 QLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+ IH+ + + GWE DVFVGAALIDMYAKCG
Sbjct: 163 KRIHEYVIKNGWERDVFVGAALIDMYAKCG 192
Score = 83.2 bits (204), Expect = 6e-14
Identities = 45/138 (32%), Positives = 78/138 (56%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
A+ GK++H + + NG + L+++Y+ C + +AR VFD+I + LWN +
Sbjct: 158 AVGEGKRIHEYVIKNGWERDVFVGAALIDMYAKCGCVIDARYVFDKILVRDD--VLWNSM 215
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
+ A+A NG ++SL ++ G++P T V+ + + ++ L G+ IH + G+
Sbjct: 216 LAAYAQNGHPDESLSLCREMAATGVRPTEATLVTVISSSADIACLPNGREIHGFSWKHGF 275
Query: 89 ESDVFVGAALIDMYAKCG 36
+S+ V ALIDMYAKCG
Sbjct: 276 QSNDKVKTALIDMYAKCG 293
Score = 62.0 bits (149), Expect = 1e-07
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = -3
Query: 479 SLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPN 300
+++ S D + G+++H +G + + T L+++Y+ C + AR +FDR+
Sbjct: 249 TVISSSADIACLPNGREIHGFSWKHGFQSNDKVKTALIDMYAKCGYVKVARALFDRL--R 306
Query: 299 HNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
+ WN +I +A +G A+ L+ + + +PD TF VL ACS L +G+
Sbjct: 307 EKRVISWNAIITGYAMHGLAVEALDLFEE-MRKEARPDLITFVGVLAACSRGRLLDEGRE 365
Query: 119 IHQDITR-LGWESDVFVGAALIDMYAKCG 36
++ + R G V ++D+ CG
Sbjct: 366 LYNLMVRDYGINPTVQHYTCMVDLLGHCG 394
>ref|XP_006426947.1| hypothetical protein CICLE_v10027522mg, partial [Citrus clementina]
gi|557528937|gb|ESR40187.1| hypothetical protein
CICLE_v10027522mg, partial [Citrus clementina]
Length = 488
Score = 197 bits (502), Expect = 2e-48
Identities = 94/151 (62%), Positives = 116/151 (76%)
Frame = -3
Query: 491 SHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDR 312
S+Y SLLQS I KA+ PGKQ+HA G +H +ATKL++LYS C+ L NA +FDR
Sbjct: 10 SYYVSLLQSCIAQKAVSPGKQIHALISQMGFGFHPVLATKLVHLYSACDCLHNAHQLFDR 69
Query: 311 ITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALH 132
I N+FLWN+LIR +AWNGP+ VAI LY++LL +GL PDNFTFPF LKACSALSA+
Sbjct: 70 IP--QRNLFLWNVLIRGYAWNGPYEVAIELYYRLLEFGLVPDNFTFPFALKACSALSAIE 127
Query: 131 QGQLIHQDITRLGWESDVFVGAALIDMYAKC 39
+G+ IH+D+ R WE+DVFVGAALIDMYAKC
Sbjct: 128 EGRRIHEDVIRNKWETDVFVGAALIDMYAKC 158
Score = 64.3 bits (155), Expect = 3e-08
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITP-----NHNNIF 285
AIE G+++H + N + L+++Y+ C+ + NAR VFD+I +
Sbjct: 125 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDVVLREKRVV 184
Query: 284 LWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDI 105
WN +I +A +G + A+ L+ ++ +QPD+ TF VL ACS +G++ + +
Sbjct: 185 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 243
Query: 104 TR 99
R
Sbjct: 244 VR 245
>ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Citrus sinensis]
Length = 644
Score = 197 bits (500), Expect = 3e-48
Identities = 95/151 (62%), Positives = 116/151 (76%)
Frame = -3
Query: 491 SHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDR 312
S+Y SLLQS I KA+ PGKQ+HA G +H +ATKL++LYS C+ L NA +FDR
Sbjct: 72 SYYGSLLQSCIAQKAVSPGKQIHALISQMGFGFHPVLATKLVHLYSACDCLHNAHQLFDR 131
Query: 311 ITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALH 132
I N+FLWN+LIRA+AWNGP+ VAI LY++LL GL PDNFTFPF LKACSALSA+
Sbjct: 132 IP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 189
Query: 131 QGQLIHQDITRLGWESDVFVGAALIDMYAKC 39
+G+ IH+D+ R WE+DVFVGAALIDMYAKC
Sbjct: 190 EGRRIHEDVIRNKWETDVFVGAALIDMYAKC 220
Score = 88.6 bits (218), Expect = 1e-15
Identities = 49/141 (34%), Positives = 80/141 (56%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
AIE G+++H + N + L+++Y+ C+ + NAR VFD+I ++ +WN +
Sbjct: 187 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL--ERDVVVWNSM 244
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
I A+ NG +I L +++ GL+P T V+ A + ++AL QG+ +H R +
Sbjct: 245 IAAYGQNGQADESIELCREMILTGLKPSEATLVTVISASTDIAALPQGRELHGFSWRHRF 304
Query: 89 ESDVFVGAALIDMYAKCGTNK 27
E +V V AL+DMYAKCG K
Sbjct: 305 ELNVKVKTALVDMYAKCGLVK 325
Score = 59.7 bits (143), Expect = 7e-07
Identities = 31/127 (24%), Positives = 66/127 (51%)
Frame = -3
Query: 479 SLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPN 300
+++ + D A+ G++LH + + + T L+++Y+ C + AR +F+++
Sbjct: 278 TVISASTDIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL--G 335
Query: 299 HNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
+ WN +I +A +G + A+ L+ ++ +QPD+ TF VL ACS +G++
Sbjct: 336 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 394
Query: 119 IHQDITR 99
+ + R
Sbjct: 395 FFESMVR 401
>ref|XP_002516017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544922|gb|EEF46437.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 472
Score = 193 bits (491), Expect = 3e-47
Identities = 92/152 (60%), Positives = 114/152 (75%)
Frame = -3
Query: 491 SHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDR 312
S+Y + LQS I KA+ PGKQLHA GL + +A KL+NLY +CNSL ARL+FD+
Sbjct: 88 SYYAAFLQSCITQKALIPGKQLHASLCHVGLQFDRVLAPKLVNLYCICNSLCEARLLFDK 147
Query: 311 ITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALH 132
I N+FLWN+LIR +AW GP+ +I LY+++ YGL PDNFTFPFVLKACSALSA+
Sbjct: 148 IPKR--NLFLWNVLIRGYAWYGPYEASIQLYYKIFDYGLVPDNFTFPFVLKACSALSAIE 205
Query: 131 QGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
G+LIH+ + R GWE DVFVGAALIDMY+KCG
Sbjct: 206 DGRLIHEQVMRSGWERDVFVGAALIDMYSKCG 237
Score = 83.6 bits (205), Expect = 4e-14
Identities = 47/141 (33%), Positives = 78/141 (55%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
AIE G+ +H + +G + L+++YS C + NAR VF + + LWN +
Sbjct: 203 AIEDGRLIHEQVMRSGWERDVFVGAALIDMYSKCGCVDNAREVFHKFPVR--DAVLWNSM 260
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
+ A++ NG +++L +++ G++P T V+ A + ++AL QG+ +H R +
Sbjct: 261 LAAYSQNGKPDKSLALCSEMVLAGVRPTEATLVTVISASADIAALPQGRELHGFAWRRRF 320
Query: 89 ESDVFVGAALIDMYAKCGTNK 27
ES+ V LIDMYAKCGT K
Sbjct: 321 ESNDKVKTTLIDMYAKCGTMK 341
>gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis]
Length = 651
Score = 188 bits (477), Expect = 1e-45
Identities = 92/153 (60%), Positives = 116/153 (75%)
Frame = -3
Query: 497 PISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVF 318
P S+Y SL+QS I KAI+PGKQLH+H GL ++T +ATKL+N+Y VC SL NA +F
Sbjct: 76 PASYYASLIQSCITRKAIKPGKQLHSHLCQMGLGFNTFLATKLVNMYCVCGSLWNAHHLF 135
Query: 317 DRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSA 138
DRI N+FLWN+LIR +AWNGP+ VAI+LY+Q+ GL PD +TFPFVLKACSALSA
Sbjct: 136 DRIPKR--NLFLWNVLIRGYAWNGPYEVAIALYNQMFDCGLVPDRYTFPFVLKACSALSA 193
Query: 137 LHQGQLIHQDITRLGWESDVFVGAALIDMYAKC 39
+ G+ IH+ + E+DV+VGAALIDMYAKC
Sbjct: 194 IEVGRKIHERVVYTMCETDVYVGAALIDMYAKC 226
Score = 76.3 bits (186), Expect = 7e-12
Identities = 45/141 (31%), Positives = 76/141 (53%)
Frame = -3
Query: 449 AIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNIL 270
AIE G+++H + + L+++Y+ C +AR VFD+I + LWN +
Sbjct: 193 AIEVGRKIHERVVYTMCETDVYVGAALIDMYAKCCCPQSARRVFDKI--EERDAVLWNSM 250
Query: 269 IRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
+ A+ NG +++L +++ GL+P T V+ A + + AL G+ +H R G+
Sbjct: 251 LAAYTQNGHPDESLALCSEMVLAGLRPTEATLVTVISASADIVALPAGKELHGFSLRNGF 310
Query: 89 ESDVFVGAALIDMYAKCGTNK 27
ES+ V AL+DMYAK G+ K
Sbjct: 311 ESNDKVKTALVDMYAKSGSVK 331
Score = 66.2 bits (160), Expect = 7e-09
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = -3
Query: 479 SLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPN 300
+++ + D A+ GK+LH L NG + + T L+++Y+ S+ AR +F+R+
Sbjct: 284 TVISASADIVALPAGKELHGFSLRNGFESNDKVKTALVDMYAKSGSVKVARTLFERL--G 341
Query: 299 HNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
+ WN +I +A +G + A+ L+ ++ G D+ TF VL ACS L +G +
Sbjct: 342 EKRVVSWNAMITGYAMHGYAAEALDLFEKMKGGGAVTDHITFVGVLGACSRGGLLDKGLM 401
Query: 119 IHQDITR-LGWESDVFVGAALIDMYAKCG 36
+ R E V ++D+ CG
Sbjct: 402 FFDFMVREYHIEPTVQHYTCMVDLLGHCG 430
>gb|EYU20172.1| hypothetical protein MIMGU_mgv11b016157mg [Mimulus guttatus]
Length = 590
Score = 181 bits (460), Expect = 1e-43
Identities = 92/157 (58%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
Frame = -3
Query: 503 PLPISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAY-HTPIATKLLNLYSVCNSLSNAR 327
P+ HY S+L+S I K+IEPGKQ+HA LNG+ + +AT+L+NLY+VC L +A
Sbjct: 8 PILPHHYASVLKSCISQKSIEPGKQIHARLCLNGVVLSNVNLATQLVNLYTVCKFLRHAH 67
Query: 326 LVFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSA 147
+FD+I NIFLWNILIR +AWNGPH AISLY QL+ L PD FTFPF LKACSA
Sbjct: 68 HLFDKIPSP--NIFLWNILIRGYAWNGPHEAAISLYRQLIDQELVPDKFTFPFALKACSA 125
Query: 146 LSALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
LS + G+ IH+ + + G E+DVFVGAALIDMYAKCG
Sbjct: 126 LSEIDVGREIHERVKKTGLETDVFVGAALIDMYAKCG 162
Score = 72.4 bits (176), Expect = 1e-10
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Frame = -3
Query: 446 IEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNILI 267
I+ G+++H GL + L+++Y+ C +S +R VFD+I ++ LWN ++
Sbjct: 129 IDVGREIHERVKKTGLETDVFVGAALIDMYAKCGCVSESRQVFDKIADK--DVVLWNSML 186
Query: 266 RAFAWNGPHSVAISLYHQLLHYG-LQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGW 90
A++ NG + L ++ G L+P T + A + SA+ QG+ +H R+G+
Sbjct: 187 AAYSQNGHPEECLKLCSEMASRGYLKPTEATLVTAISASADSSAVIQGRELHGYSWRIGF 246
Query: 89 ESDVFVGAALIDMYAKCG 36
+ + V LIDMYAK G
Sbjct: 247 KFNDKVNTGLIDMYAKSG 264
>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 160 bits (406), Expect = 2e-37
Identities = 76/160 (47%), Positives = 108/160 (67%)
Frame = -3
Query: 503 PLPISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARL 324
P HYTS+LQS + +++ G+QLH L++GL T +ATKL++LY+ C + +AR
Sbjct: 59 PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118
Query: 323 VFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSAL 144
+FD + N+FLWN+LIRA+A +GPH VAI LY ++ YG++PDNFT+P LKAC+AL
Sbjct: 119 LFDGMPKR--NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176
Query: 143 SALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCGTNKD 24
L G+ +H+ + W D+FV A L+DMYAKCG D
Sbjct: 177 LDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDD 216
Score = 65.5 bits (158), Expect = 1e-08
Identities = 40/137 (29%), Positives = 69/137 (50%)
Frame = -3
Query: 446 IEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNILI 267
+E G+++H L + L+++Y+ C + +AR VFDRI + + WN +I
Sbjct: 179 LETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVV--WNSMI 236
Query: 266 RAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGWE 87
A+ NG A+SL + G+ P T + A + +AL +G+ +H R G++
Sbjct: 237 AAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFD 296
Query: 86 SDVFVGAALIDMYAKCG 36
+ +L+DMYAK G
Sbjct: 297 RQDKLKTSLVDMYAKSG 313
>ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein
SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 160 bits (404), Expect = 4e-37
Identities = 79/159 (49%), Positives = 111/159 (69%), Gaps = 3/159 (1%)
Frame = -3
Query: 503 PLPISH--YTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNA 330
P P +H Y ++L+S + +A+ PG+QLHA L++GL +AT+L++LY+ C +S A
Sbjct: 58 PYPYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVA 117
Query: 329 RLVFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYG-LQPDNFTFPFVLKAC 153
R +FD + PN N+FLWN+LIRA+A +GP AI LY ++L G ++PDNFT+P VLKAC
Sbjct: 118 RRLFDEM-PNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKAC 176
Query: 152 SALSALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+AL L G+ +H + R W +DVFV A LIDMYAKCG
Sbjct: 177 AALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCG 215
Score = 59.3 bits (142), Expect = 9e-07
Identities = 39/150 (26%), Positives = 70/150 (46%)
Frame = -3
Query: 485 YTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRIT 306
Y +L++ + G+++H + A + L+++Y+ C + A VFD T
Sbjct: 169 YPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTT 228
Query: 305 PNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQG 126
+ +WN +I A NG + A++L + G+ P T + A + AL +G
Sbjct: 229 VR--DAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRG 286
Query: 125 QLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+ +H R G+ S + +L+DMYAK G
Sbjct: 287 RELHGYGWRRGFGSQDKLKTSLLDMYAKSG 316
>tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 159 bits (401), Expect = 8e-37
Identities = 79/159 (49%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Frame = -3
Query: 503 PLPISH--YTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNA 330
P P +H Y ++L+S + +A+ PG+QLHA L++G +AT+L++LY+ C +S A
Sbjct: 63 PSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLA 122
Query: 329 RLVFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYG-LQPDNFTFPFVLKAC 153
R VFD + PN N+FLWN+LIRA+A +GP AI LY +L YG ++PDNFT+P VLKAC
Sbjct: 123 RRVFDEM-PNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKAC 181
Query: 152 SALSALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+AL L G+ +H + R W +DVFV LIDMYAKCG
Sbjct: 182 AALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCG 220
Score = 61.2 bits (147), Expect = 2e-07
Identities = 40/150 (26%), Positives = 72/150 (48%)
Frame = -3
Query: 485 YTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRIT 306
Y +L++ + G+++H + A + T L+++Y+ C + A VF+ T
Sbjct: 174 YPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTT 233
Query: 305 PNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQG 126
+ +WN +I A NG + A++L + G+ P T + A + SAL +G
Sbjct: 234 IR--DAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRG 291
Query: 125 QLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+ +H R G+ S + +L+DMYAK G
Sbjct: 292 RELHGYGWRRGFGSQDKLKTSLLDMYAKSG 321
>ref|XP_004965520.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Setaria italica]
Length = 639
Score = 158 bits (399), Expect = 1e-36
Identities = 75/156 (48%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
Frame = -3
Query: 500 LPISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLV 321
L +HY + L+S + +A+ PG+QLHA L++GL + +AT+L++LY+ C +S+AR +
Sbjct: 60 LSYNHYATNLRSCVLSRAVRPGRQLHARLLVSGLGLNPALATRLVDLYASCGHVSHARRL 119
Query: 320 FDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYG-LQPDNFTFPFVLKACSAL 144
FD + P N+FLWN+LIRA+A +GP AI +Y +L +G ++PDNFT+P VLKAC+AL
Sbjct: 120 FDGM-PQQRNVFLWNVLIRAYARDGPREAAIEMYRAMLAHGSVEPDNFTYPPVLKACAAL 178
Query: 143 SALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
L G+ +H+ + R W +DVFV A L+DMYAKCG
Sbjct: 179 LDLAAGRELHERVARTRWAADVFVRAGLVDMYAKCG 214
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = -3
Query: 494 ISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFD 315
I+ S + + D A+ G++LH + G + T LL++Y+ + AR+VF+
Sbjct: 266 IATLVSAISAAADAAALPRGRELHGYGWRRGFGLQDKLKTSLLDMYAKSGLVRVARVVFE 325
Query: 314 RITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYG-LQPDNFTFPFVLKACS 150
++ H ++ WN +I + +G A++L+ ++ + PDN TF VL AC+
Sbjct: 326 QLV--HRDLVSWNSMICGYGMHGHADEALALFSKMRSEAQVMPDNITFVGVLSACN 379
>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 154 bits (389), Expect = 2e-35
Identities = 72/160 (45%), Positives = 106/160 (66%)
Frame = -3
Query: 503 PLPISHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARL 324
P H+TS+LQS + ++ G+QLH L++GL T ++TKL++LY+ C + +AR
Sbjct: 59 PHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARR 118
Query: 323 VFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSAL 144
+FD + N+FLWN+LIRA+A GP A+ LY ++ +G++PDNFT+P VLKAC+AL
Sbjct: 119 LFDGMPKR--NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAAL 176
Query: 143 SALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCGTNKD 24
L G+ +HQ ++ W DVFV A ++DMYAKCG D
Sbjct: 177 LDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDD 216
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/150 (25%), Positives = 71/150 (47%)
Frame = -3
Query: 485 YTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRIT 306
Y +L++ +E G+++H + ++++Y+ C + +AR VFD I
Sbjct: 166 YPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIA 225
Query: 305 PNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQG 126
+ +WN +I A+ NG A++L + G+ P T + A + +AL +G
Sbjct: 226 VR--DAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRG 283
Query: 125 QLIHQDITRLGWESDVFVGAALIDMYAKCG 36
+ +H R G+ + +L+DMYAK G
Sbjct: 284 RELHGFGWRRGFGLQDKLKTSLVDMYAKSG 313
>ref|XP_006389523.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550312346|gb|ERP48437.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 799
Score = 150 bits (379), Expect = 3e-34
Identities = 79/167 (47%), Positives = 105/167 (62%), Gaps = 8/167 (4%)
Frame = -3
Query: 500 LPISHYTSLLQSYIDCKAIEPGKQLHAHFL--------LNGLAYHTPIATKLLNLYSVCN 345
L + + T LL+S I K++ GK +H H L N + P KL++LY C+
Sbjct: 7 LSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFE-KLVDLYIACS 65
Query: 344 SLSNARLVFDRITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFV 165
L AR VFD++ N+ LWN+LIRA+AWNGP+ AI LY+++L YG+ P+ FTFPFV
Sbjct: 66 ELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFV 125
Query: 164 LKACSALSALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCGTNKD 24
LKACSAL +G+ IH DI RL ES+V+V AL+D YAKCG D
Sbjct: 126 LKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDD 172
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/137 (27%), Positives = 66/137 (48%)
Frame = -3
Query: 446 IEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNILI 267
+ G LH + + +G + LL++Y+ C ++ A F+ + + + + +I
Sbjct: 341 LSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEM--DLRDAVSFTAII 398
Query: 266 RAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRLGWE 87
+ NG + ++ ++ G+ P+ T VL AC+ L+ LH G H G+
Sbjct: 399 SGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFT 458
Query: 86 SDVFVGAALIDMYAKCG 36
+D + ALIDMYAKCG
Sbjct: 459 ADTMICNALIDMYAKCG 475
Score = 65.9 bits (159), Expect = 9e-09
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = -3
Query: 452 KAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPNHNNIFLWNI 273
K G+++H L + ++T L++ Y+ C L +A+ VFD++ + ++ WN
Sbjct: 133 KEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKM--HKRDVVAWNS 190
Query: 272 LIRAFAWN-GPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQLIHQDITRL 96
+I F+ + G + L Q+ + + P++ T VL A + +++L G+ IH R
Sbjct: 191 MISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRR 249
Query: 95 GWESDVFVGAALIDMYAKC 39
G+ DV VG ++D+Y KC
Sbjct: 250 GFVGDVVVGTGILDVYGKC 268
Score = 63.9 bits (154), Expect = 3e-08
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = -3
Query: 479 SLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDRITPN 300
S+L + + G H + ++ G T I L+++Y+ C + AR VFDR+ +
Sbjct: 431 SVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM--H 488
Query: 299 HNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNFTFPFVLKACSALSALHQGQL 120
I WN +I A+ +G A+ L+ + GL+PD+ TF ++ ACS + +G+
Sbjct: 489 KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKY 548
Query: 119 IHQDITR-LGWESDVFVGAALIDMYAKCGTNKDV 21
+T+ G + A ++D+ ++ G K+V
Sbjct: 549 WFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEV 582
Score = 63.2 bits (152), Expect = 6e-08
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Frame = -3
Query: 491 SHYTSLLQSYIDCKAIEPGKQLHAHFLLNGLAYHTPIATKLLNLYSVCNSLSNARLVFDR 312
S +L + ++ GK++H + G + T +L++Y C + AR +FD
Sbjct: 221 STIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDM 280
Query: 311 ITPNHNNIFLWNILIRAFAWNGPHSVAISLYHQLLHYGLQPDNF-----TFPFVLKACSA 147
+ N + W+ ++ A+ A+ L+ QLL L+ D T V++ C+
Sbjct: 281 MGIVKNEV-TWSAMVGAYVVCDFMREALELFCQLLM--LKDDVIVLSAVTLATVIRVCAN 337
Query: 146 LSALHQGQLIHQDITRLGWESDVFVGAALIDMYAKCG 36
L+ L G +H + G+ D+ VG L+ MYAKCG
Sbjct: 338 LTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCG 374