BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00007177
         (2942 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   529   0.0  
ref|XP_007041140.1| Cleavage and polyadenylation specificity fac...   526   0.0  
gb|EXB51974.1| Cleavage and polyadenylation specificity factor C...   506   0.0  
ref|XP_007214175.1| hypothetical protein PRUPE_ppa019072mg [Prun...   506   0.0  
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec...   520   0.0  
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr...   517   0.0  
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   525   0.0  
ref|XP_007147504.1| hypothetical protein PHAVU_006G130200g [Phas...   528   0.0  
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   524   0.0  
ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation spec...   524   0.0  
ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation spec...   511   0.0  
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   519   0.0  
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec...   507   0.0  
ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citr...   517   0.0  
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec...   489   0.0  
ref|XP_002300333.2| zinc finger family protein [Populus trichoca...   473   0.0  
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec...   488   0.0  
gb|AHN05783.1| YTH domain-contained RNA binding protein 14 [Malu...   506   0.0  
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec...   484   0.0  
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec...   485   0.0  

>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  529 bits (1363), Expect(2) = 0.0
 Identities = 268/374 (71%), Positives = 280/374 (74%), Gaps = 1/374 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MED+EGVL+FDFEGGLD                                S V +AE    
Sbjct: 1    MEDAEGVLSFDFEGGLDAAPGTAATVAPLIQSDATAAAAAP--------SSVVSAEPTPG 52

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
               GRRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT
Sbjct: 53   GAPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 112

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP-NRFLQQK 2095
            NEDIKECNMYKLGFCPNG DCRYRHAKLPGPPP +EEVFQKIQ LSSFNYG  NRF Q +
Sbjct: 113  NEDIKECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRFYQNR 172

Query: 2094 NASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSLP 1915
            N  Y QQTE+SQ    SN  N G   + + TE                         +LP
Sbjct: 173  NP-YNQQTEKSQILQGSNAVNLGTVAKSSTTEAINVQQQQVQPPQQQVSQTPMQ---NLP 228

Query: 1914 DALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 1735
            + LPNQ NKTASPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS EN
Sbjct: 229  NGLPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVEN 288

Query: 1734 VILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHKT 1555
            VILIFSVNRTRHFQGCAKMTSKIG  VGGGNWK+AHGTAHYGRNFSVKWLKLCELSFHKT
Sbjct: 289  VILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 348

Query: 1554 RHLRNPYNENLPVK 1513
            RHLRNPYNENLPVK
Sbjct: 349  RHLRNPYNENLPVK 362



 Score =  301 bits (770), Expect(2) = 0.0
 Identities = 179/336 (53%), Positives = 198/336 (58%), Gaps = 4/336 (1%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMAIS+           KGVNPD G ENPDIVP
Sbjct: 363  ISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVP 422

Query: 1319 FXXXXXXXXXXXXXXXXSF-XXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPV 1143
            F                SF               G+MWPPHMPLA G RP+P +RGFPPV
Sbjct: 423  FEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMPLARGARPIPSMRGFPPV 482

Query: 1142 MMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTP---VDG 972
            MMGADGF+Y  V PD   M                    D+ GVG  +   + P    D 
Sbjct: 483  MMGADGFSYSAVPPDGFAM-------------------PDIFGVGPRAFPPYGPRFSGDF 523

Query: 971  AGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXXX 792
             GPASGMMF GR  QPG +F P SG GM+MGPGRAPFMGGMG+ A    R+GR       
Sbjct: 524  TGPASGMMFPGR-GQPGAVF-PASGYGMMMGPGRAPFMGGMGVPAAAPTRAGRPVGMPPM 581

Query: 791  XXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHPGL 612
                    SQ  +   K+DQR P NDRNDRYS G DQGRGQ+      GP DE +Y  GL
Sbjct: 582  FPPPPPPNSQ--NNRTKRDQRTPVNDRNDRYSGGSDQGRGQD----MAGPDDETQYLQGL 635

Query: 611  KVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
            K Q  D +GGGNS+ ND+SESEDEAPRRSRHGE KK
Sbjct: 636  KSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKK 671


>ref|XP_007041140.1| Cleavage and polyadenylation specificity factor 30 [Theobroma cacao]
            gi|508705075|gb|EOX96971.1| Cleavage and polyadenylation
            specificity factor 30 [Theobroma cacao]
          Length = 698

 Score =  526 bits (1356), Expect(2) = 0.0
 Identities = 267/381 (70%), Positives = 284/381 (74%), Gaps = 8/381 (2%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVT- 2455
            M+DSEG L+FDFEGGLD                                +V  AA T T 
Sbjct: 1    MDDSEGGLSFDFEGGLDAGPAAPTASMPVVNSDPSAAANNNSNNN---SAVPGAAPTSTN 57

Query: 2454 -----VNHGG--RRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECRE 2296
                 V  GG  RRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRL+GECRE
Sbjct: 58   DPAAAVGGGGAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE 117

Query: 2295 QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP 2116
            QDCVYKHTNEDIKECNMYKLGFCPNG DCRYRHAKLPGPPPPVEEV QKIQ LSS+NY  
Sbjct: 118  QDCVYKHTNEDIKECNMYKLGFCPNGADCRYRHAKLPGPPPPVEEVLQKIQQLSSYNY-- 175

Query: 2115 NRFLQQKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXX 1936
            N+F QQ+N+ +AQQTE+SQ P   N  NQGA  +P+ TE                     
Sbjct: 176  NKFFQQRNSGFAQQTEKSQIPQGQNNVNQGAGGKPSTTESANMHPQQQVQQPQQQVSQTQ 235

Query: 1935 XXXQSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 1756
                ++P+   NQ NKTA PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE
Sbjct: 236  IQ--NVPNGQSNQANKTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 293

Query: 1755 AFDSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLC 1576
            AFDSAENVILIFSVNRTRHFQGCAKMTSKIG  V GGNWK+AHGTAHYGRNFSVKWLKLC
Sbjct: 294  AFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLC 353

Query: 1575 ELSFHKTRHLRNPYNENLPVK 1513
            ELSFHKTRHLRNPYNENLPVK
Sbjct: 354  ELSFHKTRHLRNPYNENLPVK 374



 Score =  295 bits (756), Expect(2) = 0.0
 Identities = 172/333 (51%), Positives = 192/333 (57%), Gaps = 1/333 (0%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMAISV           KGVN D G ENPDIVP
Sbjct: 375  ISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAELKREEEKAKGVNSDNGGENPDIVP 434

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPVM 1140
            F                SF              G+MWPPHMPLA G RPMPG+RGFPP+M
Sbjct: 435  FEDNEEEEEEESEEEDESF---SAAAQGRGRGRGVMWPPHMPLARGARPMPGMRGFPPMM 491

Query: 1139 MGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVDGAGPA 960
            MG DGF+YG VTPD   + +L                   SG            D  GPA
Sbjct: 492  MGGDGFSYGPVTPDGFGVPDLFGAPRPFPPYGPR-----FSG------------DFTGPA 534

Query: 959  SGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXXXXXXX 780
            SGMMF GRP QPG +F P  GLGM+MGPGRAPFMGGMG T  N +R GR           
Sbjct: 535  SGMMFPGRPPQPGAMF-PAGGLGMMMGPGRAPFMGGMGPTGANPVRGGRPVSMPPMFPPP 593

Query: 779  XXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKY-HPGLKVQ 603
                SQ+  R +K+DQR P    NDRY  G +QGRGQE   P G   DE +Y   G K  
Sbjct: 594  PAPSSQNSGRAVKRDQRTP---TNDRYGAGSEQGRGQEMAGPGGRLDDETQYQQEGQKAH 650

Query: 602  NKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
            ++D +  GNS+ ND+SESEDEAPRRSR+GE KK
Sbjct: 651  HEDQFAAGNSFRNDESESEDEAPRRSRYGEGKK 683


>gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
            notabilis]
          Length = 710

 Score =  506 bits (1302), Expect(2) = 0.0
 Identities = 257/382 (67%), Positives = 276/382 (72%), Gaps = 9/382 (2%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---QSVVAAAET 2461
            MEDSEGVL+FDFEGGLD                                   S V+A  T
Sbjct: 1    MEDSEGVLSFDFEGGLDTTAGGCPPNAAAASAALIHPDSSAAAASNNLAASNSAVSADPT 60

Query: 2460 V-----TVNHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECRE 2296
                    N G  RSFRQTVCRHWLR LCMKG+ACGFLHQYDKSRMPVCRFFRLYGECRE
Sbjct: 61   SGGGGGASNPGRGRSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECRE 120

Query: 2295 QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP 2116
            QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPP VEEV QKIQHLSS+NY  
Sbjct: 121  QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQHLSSYNYHS 180

Query: 2115 NRFLQQKNA-SYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXX 1939
            N+F QQ+NA  +AQ  E+   P   N  +QG   +P+I E                    
Sbjct: 181  NKFFQQRNAGGFAQLGEKPLLPLGPNAVSQGVVGKPSILE-SANVQQPQQQVQPSQQPVG 239

Query: 1938 XXXXQSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLN 1759
                Q++   LPNQ N+T +PLP G+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLN
Sbjct: 240  QNQIQNVFTGLPNQANRTVAPLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLN 299

Query: 1758 EAFDSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKL 1579
            EAFD AENVILIFSVNRTRHFQGCAKM S+IG  + GGNWK+AHGTAHYGRNFSVKWLKL
Sbjct: 300  EAFDCAENVILIFSVNRTRHFQGCAKMISRIGGSISGGNWKYAHGTAHYGRNFSVKWLKL 359

Query: 1578 CELSFHKTRHLRNPYNENLPVK 1513
            CELSFHKTRHLRNPYNENLPVK
Sbjct: 360  CELSFHKTRHLRNPYNENLPVK 381



 Score =  298 bits (763), Expect(2) = 0.0
 Identities = 169/335 (50%), Positives = 194/335 (57%), Gaps = 3/335 (0%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMAIS+           KGV+PD G ENPDIVP
Sbjct: 382  ISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVDPDNGGENPDIVP 441

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPVM 1140
            F                SF              G+MWPPHMPL+ G RPMP ++GFPPVM
Sbjct: 442  FEDNEEDEEEESEDEEESFSQVLGANQGRGRGRGVMWPPHMPLSRGARPMPSMQGFPPVM 501

Query: 1139 MGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV---DGA 969
            +GADG  YG VTPD   M                    DL  VG  +   + P    D  
Sbjct: 502  IGADGSPYGPVTPDGFPMP-------------------DLFNVGPRAFNPYGPRFPGDFM 542

Query: 968  GPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXXXX 789
            GP SGMMF GRP QPG +FP   G GM+MGPGRAP MGGMG+  T+  R  R        
Sbjct: 543  GPTSGMMFRGRPTQPGAVFPG-GGFGMMMGPGRAPCMGGMGVQGTSPARPMRPGAMPPMF 601

Query: 788  XXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHPGLK 609
                   SQ+ +R  ++DQR   NDRN+RY  G DQ RGQE   P+GGP D+  Y  G K
Sbjct: 602  QQPPPP-SQNMNRPPRRDQRGLANDRNERYGAGSDQVRGQEMSGPAGGPEDDAHYQLGAK 660

Query: 608  VQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             + +D YG GNS+ ND+SESEDEAPRRSRHG+ KK
Sbjct: 661  ARQEDQYGAGNSFRNDESESEDEAPRRSRHGDGKK 695


>ref|XP_007214175.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
            gi|462410040|gb|EMJ15374.1| hypothetical protein
            PRUPE_ppa019072mg [Prunus persica]
          Length = 695

 Score =  506 bits (1304), Expect(2) = 0.0
 Identities = 249/374 (66%), Positives = 273/374 (72%), Gaps = 1/374 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MEDS+G +NFDFEGGLD                                +          
Sbjct: 1    MEDSDGDINFDFEGGLDATAAAGPTNPGPPSNSLMQSDSGVAAVDTNPAAAAPQPNHPNP 60

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
            N  G RS+RQTVCRHWLR LCMKG+ACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT
Sbjct: 61   NRSGGRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 120

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP-NRFLQQK 2095
            NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEV QKIQHL+S+NY   N+F QQ+
Sbjct: 121  NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNTSNKFYQQR 180

Query: 2094 NASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSLP 1915
            NA + QQ ++ Q     N+  QG   +P+  E                         +LP
Sbjct: 181  NAGFPQQADKYQSAQGPNSVYQGVVGKPSTGESANVHQQQQVQQTQQQVGHTQTQ--NLP 238

Query: 1914 DALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 1735
            + L NQ N++A PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDSAEN
Sbjct: 239  NGLANQANRSA-PLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAEN 297

Query: 1734 VILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHKT 1555
            VILIFSVNRTRHFQGCAKM S+IG  V GGNWK+AHG+AHYGRNFSVKWLKLCELSFHKT
Sbjct: 298  VILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGSAHYGRNFSVKWLKLCELSFHKT 357

Query: 1554 RHLRNPYNENLPVK 1513
            RHLRNPYNENLPVK
Sbjct: 358  RHLRNPYNENLPVK 371



 Score =  292 bits (748), Expect(2) = 0.0
 Identities = 173/340 (50%), Positives = 190/340 (55%), Gaps = 8/340 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMA+S+           KGVNP+ G ENPDIVP
Sbjct: 372  ISRDCQELEPSIGEQLASLLYLEPDSELMAVSIAAESKREEEKAKGVNPENGGENPDIVP 431

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXG--MMWPPHMPLAHGGRPMPGVRGFPP 1146
            F                SF                 +MWPPHMPLA GGRPMPG++GFPP
Sbjct: 432  FEDNEEEEEEESDDEEESFGPVPGVGNEGRGRGRGGIMWPPHMPLARGGRPMPGMQGFPP 491

Query: 1145 VMMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV---- 978
             MMGAD   YG   PD   M                       GVG     GF P     
Sbjct: 492  GMMGADAMPYGPA-PDGFGMPNPF-------------------GVGPR---GFNPYGPRF 528

Query: 977  --DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXX 804
              D  GP  GMMF GRPQQPG  FPP  G GM+MGPGRAPFMGGMG+   N  R GR   
Sbjct: 529  SGDFTGPTPGMMFRGRPQQPG--FPP-GGYGMMMGPGRAPFMGGMGVGGANPGRPGRPTG 585

Query: 803  XXXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKY 624
                        SQ+ +RM K+D R P NDRN+RYS G  QG+GQE    +GGP DE +Y
Sbjct: 586  MSPMFPPPS---SQNTNRMQKRDPRGPSNDRNERYSAGSGQGKGQEIPGLAGGPDDEARY 642

Query: 623  HPGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
                K   +D YG GN+  NDDSESEDEAPRRSRHGE KK
Sbjct: 643  QQASKAYREDQYGAGNNSRNDDSESEDEAPRRSRHGEGKK 682


>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Citrus sinensis]
          Length = 683

 Score =  520 bits (1340), Expect(2) = 0.0
 Identities = 259/374 (69%), Positives = 279/374 (74%), Gaps = 1/374 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MEDSEG L+FDFEGGLD                                     A     
Sbjct: 1    MEDSEGGLSFDFEGGLDAGPGMPTASNPAAAPSSSGAAPDH-------------ASAPVP 47

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
            +H GRRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHT
Sbjct: 48   HHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT 107

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNRFLQQK 2095
            NEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEV QKIQ +SS+N+G PN+  QQ+
Sbjct: 108  NEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQR 167

Query: 2094 NASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSLP 1915
             A ++ QT++SQF    N  NQGAA + +  E                         +LP
Sbjct: 168  GA-FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQ-NLP 225

Query: 1914 DALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 1735
            + LPNQ N+ A+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN
Sbjct: 226  NGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 285

Query: 1734 VILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHKT 1555
            VILIFSVNRTRHFQGCAKMTSKIG  VGGGNWK+AHGTAHYGRNFSVKWLKLCELSFHKT
Sbjct: 286  VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 345

Query: 1554 RHLRNPYNENLPVK 1513
            RHLRNPYNENLPVK
Sbjct: 346  RHLRNPYNENLPVK 359



 Score =  277 bits (708), Expect(2) = 0.0
 Identities = 169/333 (50%), Positives = 186/333 (55%), Gaps = 1/333 (0%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLA+LLYLEPDSELMAISV           KGVNPD G +NPDIVP
Sbjct: 360  ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVP 419

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPVM 1140
            F                S                MMWP  MPLA G RP+PG+RGFPP+M
Sbjct: 420  FEDNEEEEEEESEEEEESLGTASQGRGRGRG---MMWPGPMPLARGARPVPGMRGFPPMM 476

Query: 1139 MGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVDGAGPA 960
            +GADGF+YG VTPD   M +L                GD +G G                
Sbjct: 477  IGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTGPG---------------- 519

Query: 959  SGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXXXXXXX 780
             GMMF GRP QPG +FPP    GM+MGPGR PFMGGMG  ATN  R GR           
Sbjct: 520  -GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNP-RGGRPVGVPPPFPNQ 577

Query: 779  XXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHP-GLKVQ 603
                SQ+ SR  K+D R   NDRNDRYS G DQGR QE   P  GP DE +Y   G K  
Sbjct: 578  PQS-SQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKAN 636

Query: 602  NKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             +D YG  N + ND+SESEDEAPRRSRHGE KK
Sbjct: 637  QEDQYGSRN-FRNDESESEDEAPRRSRHGEGKK 668


>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
            gi|557551535|gb|ESR62164.1| hypothetical protein
            CICLE_v10014454mg [Citrus clementina]
          Length = 701

 Score =  517 bits (1332), Expect(2) = 0.0
 Identities = 261/379 (68%), Positives = 283/379 (74%), Gaps = 6/379 (1%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--QSVVAAAETV 2458
            MEDSEG L+FDFEGGLD                              A   S  AA +  
Sbjct: 1    MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAALSSSGAAPDHA 60

Query: 2457 TV---NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 2287
            +    +H GRRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDC
Sbjct: 61   SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120

Query: 2286 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNR 2110
            VYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEV QKIQ +SS+N+G PN+
Sbjct: 121  VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180

Query: 2109 FLQQKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXX 1930
              QQ+ A ++ Q ++SQF    N  NQGAA + +  E                       
Sbjct: 181  LFQQRGA-FSHQIDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQM 239

Query: 1929 XQSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 1750
              +LP+ LPNQ N+ A+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 240  Q-NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 298

Query: 1749 DSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCEL 1570
            DSAENVILIFSVNRTRHFQGCAKMTSKIG  VGGGNWK+AHGTAHYGRNFSVKWLKLCEL
Sbjct: 299  DSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 358

Query: 1569 SFHKTRHLRNPYNENLPVK 1513
            SFHKTRHLRNPYNENLPVK
Sbjct: 359  SFHKTRHLRNPYNENLPVK 377



 Score =  278 bits (710), Expect(2) = 0.0
 Identities = 169/333 (50%), Positives = 187/333 (56%), Gaps = 1/333 (0%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLA+LLYLEPDSELMAISV           KGVNPD G +NPDIVP
Sbjct: 378  ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVP 437

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPVM 1140
            F                S                MMWP  MPLA G RP+PG+RGFPP+M
Sbjct: 438  FEDNEEEEEEESEEEEESLGTASQGRGRGRG---MMWPGPMPLARGARPVPGMRGFPPMM 494

Query: 1139 MGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVDGAGPA 960
            +GADGF+YG VTPD   M +L                GD +G G                
Sbjct: 495  IGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTGPG---------------- 537

Query: 959  SGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXXXXXXX 780
             GMMF GRP QPG +FPP    GM+MGPGR PFMGGMG  ATN  R GR           
Sbjct: 538  -GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNP-RGGRPVGVPPPFPNQ 595

Query: 779  XXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHP-GLKVQ 603
                SQ+ SR+ K+D R   NDRNDRYS G DQGR QE   P  GP DE +Y   G K  
Sbjct: 596  PQS-SQNSSRVAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKAN 654

Query: 602  NKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             +D YG  N + ND+SESEDEAPRRSRHGE KK
Sbjct: 655  QEDQYGSRN-FRNDESESEDEAPRRSRHGEGKK 686


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
            gi|223537608|gb|EEF39232.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 702

 Score =  525 bits (1353), Expect(2) = 0.0
 Identities = 262/384 (68%), Positives = 281/384 (73%), Gaps = 11/384 (2%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSV-----VAAA 2467
            M+D++G L+FDFEGGLD                                +V      +AA
Sbjct: 1    MDDTDGGLSFDFEGGLDSSGPTNPTASIPAIPSDNTAAVAAATNNSIVPNVSSNDPASAA 60

Query: 2466 ETVTVNHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 2287
                 N  GRRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC
Sbjct: 61   AAAANNQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 120

Query: 2286 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNR 2110
            VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEV QKIQ L+S+NYG  N+
Sbjct: 121  VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSSNK 180

Query: 2109 FLQQKNASYAQQTERSQFPHVSNTTNQGAAKQPTITE-----XXXXXXXXXXXXXXXXXX 1945
            F QQ+ A + Q  ++SQF    N   QG A +P  TE                       
Sbjct: 181  FFQQRGAGFQQHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQQQ 240

Query: 1944 XXXXXXQSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAK 1765
                  Q+LP+  PNQ N+TA PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAK
Sbjct: 241  ATQTPTQNLPNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK 300

Query: 1764 LNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWL 1585
            LNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIG  VGGGNWK+AHGTAHYGRNFSVKWL
Sbjct: 301  LNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWL 360

Query: 1584 KLCELSFHKTRHLRNPYNENLPVK 1513
            KLCELSFHKTRHLRNPYNENLPVK
Sbjct: 361  KLCELSFHKTRHLRNPYNENLPVK 384



 Score =  269 bits (688), Expect(2) = 0.0
 Identities = 164/339 (48%), Positives = 189/339 (55%), Gaps = 7/339 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPS+G QLA LLY EPDSELMAIS+           KGVNP+ G +NPDIVP
Sbjct: 385  ISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKREEEKAKGVNPENGGDNPDIVP 444

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPVM 1140
            F                SF                +  PHMPLA G RP+PG+RGFPP+M
Sbjct: 445  FEDNEEEEEEESEEEEESFGQALGAPGQGRGRGRGIIWPHMPLARGARPIPGMRGFPPMM 504

Query: 1139 MGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV------ 978
            MGAD F+YG VTPD   M                    DL GV   +  GFTP       
Sbjct: 505  MGADSFSYGPVTPDGFGM-------------------PDLFGV---APRGFTPYAPRFSG 542

Query: 977  DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXX 798
            D  G ASGMMF GRP QPG +F P  G GM+MGPGRAPFMGGMG  +TN +R        
Sbjct: 543  DFTGAASGMMFPGRPPQPGGVF-PNGGFGMMMGPGRAPFMGGMGPNSTNPLRGN-----W 596

Query: 797  XXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKY-H 621
                      +  P R +K+DQR      NDRYSTG DQGR     + +G P DE +Y  
Sbjct: 597  PGGMPFPPLPTPSPQRPVKRDQRMTA---NDRYSTGSDQGR-----NTAGEPDDEARYQQ 648

Query: 620  PGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             GLK  ++D +G GNS+ ND+SESEDEAPRRSRHGE KK
Sbjct: 649  EGLKASHEDQFGAGNSFRNDESESEDEAPRRSRHGEGKK 687


>ref|XP_007147504.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
            gi|561020727|gb|ESW19498.1| hypothetical protein
            PHAVU_006G130200g [Phaseolus vulgaris]
          Length = 697

 Score =  528 bits (1359), Expect(2) = 0.0
 Identities = 257/374 (68%), Positives = 278/374 (74%), Gaps = 1/374 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MEDSEGVL+FDFEGGLD                                   +  E   V
Sbjct: 1    MEDSEGVLSFDFEGGLDTAPSAAAAPSGPLVQHDSSAAASAVSNGGPPAPTPSGTEPAAV 60

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
            N  GRRSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHT
Sbjct: 61   NVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT 120

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP-NRFLQQK 2095
            NEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPPVEEV QKIQHL S+NY   N+F QQ+
Sbjct: 121  NEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQR 180

Query: 2094 NASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSLP 1915
             +SY QQ E+SQ P  +N+TNQG   +P   E                         ++ 
Sbjct: 181  GSSYTQQAEKSQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQQVSQNQIQ-NVA 239

Query: 1914 DALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 1735
            +  PNQ ++ A+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS EN
Sbjct: 240  NGQPNQASRAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVEN 299

Query: 1734 VILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHKT 1555
            VILIFSVNRTRHFQGCAKMTS+IG  V GGNWK+AHGTAHYGRNFSVKWLKLCELSFHKT
Sbjct: 300  VILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 359

Query: 1554 RHLRNPYNENLPVK 1513
            RHLRNPYNENLPVK
Sbjct: 360  RHLRNPYNENLPVK 373



 Score =  266 bits (681), Expect(2) = 0.0
 Identities = 163/336 (48%), Positives = 186/336 (55%), Gaps = 4/336 (1%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPD ELMA+SV           KGVNPD G ENPDIVP
Sbjct: 374  ISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPDNGGENPDIVP 433

Query: 1319 FXXXXXXXXXXXXXXXXSF-XXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPV 1143
            F                SF               GMMWPPHMPL  G RPMPG++GF PV
Sbjct: 434  FEDNEEEEEEESDEEDESFGHGVGPAGQGRGRGRGMMWPPHMPLPRGARPMPGMQGFNPV 493

Query: 1142 MMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTP---VDG 972
            MMG DG +YG V PD   M                    DL  VG  +   + P    D 
Sbjct: 494  MMG-DGLSYGPVAPDGFGM-------------------PDLFSVGPRAFAPYGPRFSGDF 533

Query: 971  AGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXXX 792
             GP + MMF GRP QPG    P  G GM+M PGR PFMGGMG+   N  R GR       
Sbjct: 534  GGPPAAMMFRGRPSQPGMF--PGGGFGMMMNPGRGPFMGGMGVAGANPPRGGR-PVNMPP 590

Query: 791  XXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHPGL 612
                   L Q+ +R+ K+DQR    DRNDRY +G +QG+ Q+  S SG P D+ +Y  G 
Sbjct: 591  MFPPPPPLPQNTNRLAKRDQRT--TDRNDRYGSGSEQGKSQDMLSQSGAPDDDMQYQQGY 648

Query: 611  KVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
            K  N+D +   N++ NDDSESEDEAPRRSRHGE KK
Sbjct: 649  KA-NQDDHPAVNNFRNDDSESEDEAPRRSRHGEGKK 683


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 691

 Score =  524 bits (1349), Expect(2) = 0.0
 Identities = 258/376 (68%), Positives = 279/376 (74%), Gaps = 3/376 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVA--AAETV 2458
            MEDSEGVL+FDFEGGLD                                +  A   A+  
Sbjct: 1    MEDSEGVLSFDFEGGLDAAPSSAAAAVPSGPLVQHDSSAAASAVSNGGHAAPAPSTADPA 60

Query: 2457 TVNHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 2278
              N  GRRSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYK
Sbjct: 61   GGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYK 120

Query: 2277 HTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP-NRFLQ 2101
            HTNEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPPVEEV QKIQHL S+NY   N+F Q
Sbjct: 121  HTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSNKFFQ 180

Query: 2100 QKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQS 1921
            Q+ ASY QQ E+ Q P  +N+TNQG   +P   E                         +
Sbjct: 181  QRGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQVNQSQMQ--N 238

Query: 1920 LPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSA 1741
            + +  PNQ N+TA+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS 
Sbjct: 239  VANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV 298

Query: 1740 ENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFH 1561
            ENVIL+FSVNRTRHFQGCAKMTS+IG  V GGNWK+AHGTAHYGRNFSVKWLKLCELSFH
Sbjct: 299  ENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 358

Query: 1560 KTRHLRNPYNENLPVK 1513
            KTRHLRNPYNENLPVK
Sbjct: 359  KTRHLRNPYNENLPVK 374



 Score =  266 bits (679), Expect(2) = 0.0
 Identities = 166/339 (48%), Positives = 187/339 (55%), Gaps = 7/339 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMAISV           KGVNPD G ENPDIVP
Sbjct: 375  ISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVP 434

Query: 1319 FXXXXXXXXXXXXXXXXSF-XXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPV 1143
            F                SF               GMMWPPHMPL  G RPMPG++GF PV
Sbjct: 435  FEDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWPPHMPLGRGARPMPGMQGFNPV 494

Query: 1142 MMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV----- 978
            MMG DG +YG V P                         DL GVG     GF P      
Sbjct: 495  MMG-DGLSYGPVGP----------------VGPDGFGMPDLFGVG---PRGFAPYGPRFS 534

Query: 977  -DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXX 801
             D  GP + MMF GRP QPG    P+ G GM+M PGR PFMGGMG+   N  R GR    
Sbjct: 535  GDFGGPPAAMMFRGRPSQPGMF--PSGGFGMMMNPGRGPFMGGMGVGGANPPRGGR-PVN 591

Query: 800  XXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYH 621
                      L Q+ +R  K+DQR    DRNDR+ +G +QG+ Q+  S SGGP D+ +Y 
Sbjct: 592  MPPMFPPPPPLPQNANRAAKRDQRTA--DRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQ 649

Query: 620  PGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             G K  N+D +   N++ NDDSESEDEAPRRSRHGE KK
Sbjct: 650  QGYK-GNQDDHPAVNNFRNDDSESEDEAPRRSRHGEGKK 687


>ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Cicer arietinum]
          Length = 677

 Score =  524 bits (1350), Expect(2) = 0.0
 Identities = 257/374 (68%), Positives = 282/374 (75%), Gaps = 1/374 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MEDSEGVL+FDFEGGLD                              + +    A  V+ 
Sbjct: 1    MEDSEGVLSFDFEGGLDAAPPSAATVSVPAPPSGPIVHPDSSLPPSISSN---GAAPVSG 57

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
            N  GRRSFRQTVCRHWLR LCMKG+ACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHT
Sbjct: 58   NIPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT 117

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNRFLQQK 2095
            NEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPP+EEV QKIQHL S+N+   ++F+QQ+
Sbjct: 118  NEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNFNNSHKFIQQR 177

Query: 2094 NASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSLP 1915
             +SY QQ E+SQFP   N+ NQG A +P   E                         +L 
Sbjct: 178  GSSYTQQVEKSQFPQGINSANQGVAGKPLAAESGNVQQQQQVQQSQQQVSQIQTQ--NLA 235

Query: 1914 DALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 1735
            +  PNQ N+TA+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS EN
Sbjct: 236  NGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVEN 295

Query: 1734 VILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHKT 1555
            VILIFSVNRTRHFQGCAKMTS+IG  V GGNWK+AHGTAHYGRNFSVKWLKLCELSFHKT
Sbjct: 296  VILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 355

Query: 1554 RHLRNPYNENLPVK 1513
            RHLRNPYNENLPVK
Sbjct: 356  RHLRNPYNENLPVK 369



 Score =  259 bits (663), Expect(2) = 0.0
 Identities = 164/339 (48%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMAIS+           KGVNPD   ENPDIVP
Sbjct: 370  ISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPDNAGENPDIVP 429

Query: 1319 FXXXXXXXXXXXXXXXXSF-XXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPV 1143
            F                SF               GMMWPPHMPL  G RPMPG++GF PV
Sbjct: 430  FEDNEEEEEEESDEEEESFVQAVVPVGQGRGRGRGMMWPPHMPLGRGARPMPGMQGFNPV 489

Query: 1142 MMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV----- 978
            MMG DG +YG   PD   M                    DL G+G     GF P      
Sbjct: 490  MMG-DGLSYGPGAPDGFGM-------------------PDLFGMG---PRGFGPYGPRFS 526

Query: 977  -DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXX 801
             D AGP + MMF GRP QPG    P  G GM+M PGR PFMGGMG+   N  R GR    
Sbjct: 527  GDFAGPPAAMMFRGRPSQPGMF--PGGGFGMMMNPGRGPFMGGMGVPGPNPPRGGR-PLN 583

Query: 800  XXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYH 621
                        Q+ +R+ K+DQR   NDRNDRYS+G +QG+ Q+  S SGGP DE +Y 
Sbjct: 584  MPPMFPPPPPPPQNVNRIAKRDQRT--NDRNDRYSSGQEQGKSQDMLSQSGGPDDEMQY- 640

Query: 620  PGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
                   + S    N++ N+DSESEDEAPRRSRHGE KK
Sbjct: 641  -------QQSGAPANNFRNEDSESEDEAPRRSRHGEGKK 672


>ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Fragaria vesca subsp. vesca]
          Length = 689

 Score =  511 bits (1316), Expect(2) = 0.0
 Identities = 254/374 (67%), Positives = 277/374 (74%), Gaps = 1/374 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MED +GVLNFDFEGGLD                               Q+  A      V
Sbjct: 1    MEDPDGVLNFDFEGGLDSAAVSAPTHTGLASSAPIQSDSFASQPKN--QAAPAPQPDPNV 58

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
            N  GR+SFRQTVCRHWLR LCMKG+ACGFLHQYDKSRMPVCRFFR+YGECREQDCVYKHT
Sbjct: 59   NPSGRKSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRMYGECREQDCVYKHT 118

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNRFLQQK 2095
            NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEV QKIQHL+S+NY   N+F Q +
Sbjct: 119  NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNNSNKFSQPR 178

Query: 2094 NASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSLP 1915
            N  + QQ +RSQ   V+N+ NQ   + P+  E                         S+P
Sbjct: 179  NGGFPQQHDRSQPAQVTNSFNQVVVR-PSAAESANVQQPQQFQQTQQPVAQTQAQ--SVP 235

Query: 1914 DALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 1735
            + L +Q N+ A PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDSAEN
Sbjct: 236  NGLASQANRAALPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAEN 295

Query: 1734 VILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHKT 1555
            VILIFSVNRTRHFQGCAKM S+IG  V GGNWK+AHGTAHYGRNFSVKWLKLCELSFHKT
Sbjct: 296  VILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 355

Query: 1554 RHLRNPYNENLPVK 1513
            RHLRNPYNENLPVK
Sbjct: 356  RHLRNPYNENLPVK 369



 Score =  263 bits (672), Expect(2) = 0.0
 Identities = 162/339 (47%), Positives = 180/339 (53%), Gaps = 7/339 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMAIS+           KGVNP+ G ENPDIVP
Sbjct: 370  ISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPENGGENPDIVP 429

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXGMMWPPHMPLA-HGGRPMPGVRGFPPV 1143
            F                                 +MWPPHMPL   GGRPMPG++GFP  
Sbjct: 430  FEDNEEEEEEESDDEEDY--QVPGGAIENRGRGRVMWPPHMPLGGRGGRPMPGMQGFPG- 486

Query: 1142 MMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV----- 978
            MMG D   YG VTPD   M                      +  G     GF P      
Sbjct: 487  MMGPDAMPYGPVTPDGFVMP---------------------NPFGMGGPRGFNPYGPRFS 525

Query: 977  -DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXX 801
             D  GP  GMMF GRP QPG +FPP    GM+MGPGR PFMGGMG+   N  R GR    
Sbjct: 526  GDFGGPNPGMMFRGRPPQPGGMFPP-GPYGMMMGPGRGPFMGGMGVGGNNPARGGRPGGM 584

Query: 800  XXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYH 621
                       SQ+ +R+ K+D R  GNDRN+RYS G   G+    E  +GGP DE  Y 
Sbjct: 585  PPMFPPHPP--SQNNNRLQKRDPRGSGNDRNERYSAGSGHGK----EMQAGGPDDENHYQ 638

Query: 620  PGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
               K   +D YG GN+  NDDSESEDEAPRRSRHGE KK
Sbjct: 639  HSSKSYQED-YGAGNNGRNDDSESEDEAPRRSRHGEGKK 676


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 681

 Score =  519 bits (1336), Expect(2) = 0.0
 Identities = 258/376 (68%), Positives = 276/376 (73%), Gaps = 3/376 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MEDSEGVL+FDFEGGLD                                +   +A     
Sbjct: 1    MEDSEGVLSFDFEGGLDAAPSSAAAAPSGPLIPHDSSAAASAVSNGGPAAPAPSAVDPVG 60

Query: 2451 --NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 2278
              N  GRRSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYK
Sbjct: 61   GGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYK 120

Query: 2277 HTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP-NRFLQ 2101
            HTNEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPPVEEV QKIQHL S+NY   N+F Q
Sbjct: 121  HTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQ 180

Query: 2100 QKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQS 1921
            Q+ ASY QQ E+   P  +N+TNQG    P   E                         +
Sbjct: 181  QRGASYNQQAEKPLLPQGNNSTNQGVTGNPLPAELGNAQPQQQVQQSQQQVNQSQMQ--N 238

Query: 1920 LPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSA 1741
            + +  PNQ N+TA+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS 
Sbjct: 239  VANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV 298

Query: 1740 ENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFH 1561
            ENVILIFSVNRTRHFQGCAKMTSKIG  V GGNWK+AHGTAHYGRNFSVKWLKLCELSFH
Sbjct: 299  ENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 358

Query: 1560 KTRHLRNPYNENLPVK 1513
            KTRHLRNPYNENLPVK
Sbjct: 359  KTRHLRNPYNENLPVK 374



 Score =  254 bits (650), Expect(2) = 0.0
 Identities = 163/339 (48%), Positives = 181/339 (53%), Gaps = 7/339 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMAISV           KGVNPD G ENPDIVP
Sbjct: 375  ISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVP 434

Query: 1319 FXXXXXXXXXXXXXXXXSF-XXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPV 1143
            F                SF               GMMWPPHMPL  G RPMPG++GF PV
Sbjct: 435  FEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHMPLGRGARPMPGMQGFNPV 494

Query: 1142 MMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV----- 978
            MMG DG +YG V PD   M                    DL GVG     GF P      
Sbjct: 495  MMG-DGLSYGPVGPDGFGM-------------------PDLFGVG---PRGFAPYGPRFS 531

Query: 977  -DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXX 801
             D  GP + MMF GRP QPG    P  G GM++ PGR PFMGG+G+   N  R GR    
Sbjct: 532  GDFGGPPAAMMFRGRPSQPGMF--PGGGFGMMLNPGRGPFMGGIGVGGANPPRGGR-PVN 588

Query: 800  XXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYH 621
                      L Q+ +R  K+DQR    DRNDR+ +G +QG+ Q+  S SGGP D+ +Y 
Sbjct: 589  MPPMFPPPPPLPQNANRAAKRDQRTA--DRNDRFGSGSEQGKSQDMLSQSGGPDDDPQYQ 646

Query: 620  PGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             G        Y G      DDSESEDEAPRRSRHGE KK
Sbjct: 647  QG--------YKGNQDDHPDDSESEDEAPRRSRHGEGKK 677


>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Cucumis sativus]
          Length = 707

 Score =  507 bits (1306), Expect(2) = 0.0
 Identities = 252/381 (66%), Positives = 273/381 (71%), Gaps = 8/381 (2%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQS----VVAAAE 2464
            MEDSEGVL+FDFEGGLD                                S       +AE
Sbjct: 1    MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAE 60

Query: 2463 TVTVNHGG---RRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 2293
                 HG    RRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQ
Sbjct: 61   PTGAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 2292 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGP- 2116
            DCVYKHTNEDIKECNMYK GFCPNGPDCRYRHAKLPGPPPP+EE+ QKIQHL S+NYGP 
Sbjct: 121  DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPS 180

Query: 2115 NRFLQQKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXX 1936
            N+F  Q+    +QQ E+SQFP V     QG   +P+  E                     
Sbjct: 181  NKFFTQRGVGLSQQNEKSQFPQVPALVTQGVTGKPSAAESVNVQQQQGQQSAPQASQTPV 240

Query: 1935 XXXQSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 1756
                SL +  PNQ N+ A+ LPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE
Sbjct: 241  Q---SLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 297

Query: 1755 AFDSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLC 1576
            AFDSA+NVILIFSVNRTRHFQGCAKM S+IG  V GGNWK+AHGT HYG+NFS+KWLKLC
Sbjct: 298  AFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLC 357

Query: 1575 ELSFHKTRHLRNPYNENLPVK 1513
            ELSF KTRHLRNPYNENLPVK
Sbjct: 358  ELSFQKTRHLRNPYNENLPVK 378



 Score =  259 bits (663), Expect(2) = 0.0
 Identities = 152/334 (45%), Positives = 180/334 (53%), Gaps = 2/334 (0%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPS+GEQLASLLYLEPD ELMA+SV           KGVNPD G+ENPDIVP
Sbjct: 379  ISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPDIGSENPDIVP 438

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXG--MMWPPHMPLAHGGRPMPGVRGFPP 1146
            F                                G  MMWPPHMP+  G RP  G++GFPP
Sbjct: 439  FEDNEEEEEEESEEEEEESFGQSAGLPPQGRGRGRGMMWPPHMPMGRGARPFHGMQGFPP 498

Query: 1145 VMMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVDGAG 966
             MMG DG +YG VTPD   M ++                    G G          D  G
Sbjct: 499  GMMGPDGLSYGPVTPDGFPMPDIFGMTP--------------RGFGPYGPTPRFSGDFMG 544

Query: 965  PASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXXXXX 786
            P + MMF GRP QP  +FPP SG GM+MG GR PFMGGMG+   N  R GR         
Sbjct: 545  PPTAMMFRGRPSQPAAMFPP-SGFGMMMGQGRGPFMGGMGVAGANPARPGRPVGVSPLYP 603

Query: 785  XXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHPGLKV 606
                  SQ+ +R +K+DQR      NDRY  G+DQ +G E +  S G  +E +Y  G K 
Sbjct: 604  PPAVPSSQNMNRAIKRDQR---GLTNDRYIVGMDQNKGVEIQ--SSGRDEEMQYKQGSKA 658

Query: 605  QNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             + + YG G ++ N++SESEDEAPRRSRHGE KK
Sbjct: 659  YSDEQYGTGTTFRNEESESEDEAPRRSRHGEGKK 692


>ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
            gi|557551536|gb|ESR62165.1| hypothetical protein
            CICLE_v10014454mg [Citrus clementina]
          Length = 672

 Score =  517 bits (1332), Expect(2) = 0.0
 Identities = 261/379 (68%), Positives = 283/379 (74%), Gaps = 6/379 (1%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--QSVVAAAETV 2458
            MEDSEG L+FDFEGGLD                              A   S  AA +  
Sbjct: 1    MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAALSSSGAAPDHA 60

Query: 2457 TV---NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 2287
            +    +H GRRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDC
Sbjct: 61   SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120

Query: 2286 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNR 2110
            VYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEV QKIQ +SS+N+G PN+
Sbjct: 121  VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180

Query: 2109 FLQQKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXX 1930
              QQ+ A ++ Q ++SQF    N  NQGAA + +  E                       
Sbjct: 181  LFQQRGA-FSHQIDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQM 239

Query: 1929 XQSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 1750
              +LP+ LPNQ N+ A+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 240  Q-NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 298

Query: 1749 DSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCEL 1570
            DSAENVILIFSVNRTRHFQGCAKMTSKIG  VGGGNWK+AHGTAHYGRNFSVKWLKLCEL
Sbjct: 299  DSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 358

Query: 1569 SFHKTRHLRNPYNENLPVK 1513
            SFHKTRHLRNPYNENLPVK
Sbjct: 359  SFHKTRHLRNPYNENLPVK 377



 Score =  223 bits (568), Expect(2) = 0.0
 Identities = 141/304 (46%), Positives = 158/304 (51%), Gaps = 1/304 (0%)
 Frame = -1

Query: 1412 AISVXXXXXXXXXXXKGVNPDEGAENPDIVPFXXXXXXXXXXXXXXXXSFXXXXXXXXXX 1233
            AISV           KGVNPD G +NPDIVPF                S           
Sbjct: 378  AISVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEEESLGTASQGRGRG 437

Query: 1232 XXXXGMMWPPHMPLAHGGRPMPGVRGFPPVMMGADGFTYGTVTPDRLHMQELXXXXXXXX 1053
                 MMWP  MPLA G RP+PG+RGFPP+M+GADGF+YG VTPD   M +L        
Sbjct: 438  RG---MMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPF 493

Query: 1052 XXXXXXXXGDLSGVGQSSAMGFTPVDGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPG 873
                    GD +G G                 GMMF GRP QPG +FPP    GM+MGPG
Sbjct: 494  APYGPRFSGDFTGPG-----------------GMMFPGRPPQPGSVFPPNGFGGMMMGPG 536

Query: 872  RAPFMGGMGMTATNHIRSGRXXXXXXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYST 693
            R PFMGGMG  ATN  R GR               SQ+ SR+ K+D R   NDRNDRYS 
Sbjct: 537  RPPFMGGMGPAATNP-RGGRPVGVPPPFPNQPQS-SQNSSRVAKRDVRGSINDRNDRYSA 594

Query: 692  GLDQGRGQETESPSGGPVDEGKYHP-GLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHG 516
            G DQGR QE   P  GP DE +Y   G K   +D YG  N + ND+SESEDEAPRRSRHG
Sbjct: 595  GSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRN-FRNDESESEDEAPRRSRHG 653

Query: 515  ERKK 504
            E KK
Sbjct: 654  EGKK 657


>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum tuberosum]
          Length = 692

 Score =  489 bits (1258), Expect(2) = 0.0
 Identities = 245/376 (65%), Positives = 264/376 (70%), Gaps = 3/376 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            M++ EG LNFDFEGGLD                                   A      V
Sbjct: 1    MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAAPSANINPPTVSAAVGGQSDV 60

Query: 2451 NH-GGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKH 2275
               G RRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKH
Sbjct: 61   GFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKH 120

Query: 2274 TNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNRFLQQ 2098
            T EDIKECNMYKLGFCPNGPDCRYRHAK+PGPPPPVEE+ QKIQHL+S+NYG  NRF Q 
Sbjct: 121  TIEDIKECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASYNYGYSNRFNQN 180

Query: 2097 KNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSL 1918
            +NA+Y+ Q+++SQ     N      A + T TE                          +
Sbjct: 181  RNANYSTQSDKSQASQAQN--GMSLAVKSTATETPIIQQHQPNQQVQPPQLQGGPTQAQI 238

Query: 1917 -PDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSA 1741
             P+   NQ ++TA  LPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 
Sbjct: 239  HPNGQQNQADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSV 298

Query: 1740 ENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFH 1561
            ENVILIFSVNRTRHFQGC KMTS+IG    GGNWKH HGTAHYGRNFSVKWLKLCELSF 
Sbjct: 299  ENVILIFSVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSVKWLKLCELSFQ 358

Query: 1560 KTRHLRNPYNENLPVK 1513
            KT HLRNPYNENLPVK
Sbjct: 359  KTHHLRNPYNENLPVK 374



 Score =  238 bits (608), Expect(2) = 0.0
 Identities = 150/339 (44%), Positives = 179/339 (52%), Gaps = 7/339 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPS+GEQLASLLYLEPDSELMAIS+           KGVNPD G +NPDIVP
Sbjct: 375  ISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRQEEKAKGVNPDNGKDNPDIVP 434

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXG-----MMWPPHMPLAHGGRPMPGVRG 1155
            F                                      + WPP MP  HG RP PG+RG
Sbjct: 435  FEDNEEEEEEEEEEESEDEDESFDQGFGPAALGRGRGRGIAWPPIMPFGHGPRPPPGMRG 494

Query: 1154 FPPVMMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVD 975
            FPP MMG DGF+YG +TP+   M +                            MG  P  
Sbjct: 495  FPPGMMG-DGFSYGAMTPEGFPMPD-------------------------HFGMGPRPFG 528

Query: 974  GAGP--ASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXX 801
              GP  +S +MFHGRP        P  G GM+MGPGR PFMGGMG  AT   R+GR    
Sbjct: 529  PYGPPFSSDLMFHGRP--------PAGGFGMMMGPGRPPFMGGMGPGATGPPRAGRAVGM 580

Query: 800  XXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYH 621
                       SQ P +  K++QR P +DRNDR+S+  DQG+GQE     GGP  +G + 
Sbjct: 581  HPSFVPPSSQPSQYPYKA-KREQRAPVSDRNDRFSS--DQGKGQEMMGSVGGP--DGVHM 635

Query: 620  PGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
               K ++ + +G GNS  N++SESEDEAPRRSRHG+ KK
Sbjct: 636  QIGKSEHDNQFGAGNSQKNEESESEDEAPRRSRHGDGKK 674


>ref|XP_002300333.2| zinc finger family protein [Populus trichocarpa]
            gi|550349048|gb|EEE85138.2| zinc finger family protein
            [Populus trichocarpa]
          Length = 669

 Score =  473 bits (1218), Expect(2) = 0.0
 Identities = 250/398 (62%), Positives = 267/398 (67%), Gaps = 25/398 (6%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            MEDSEGVL+FDFEGGLD                                       T   
Sbjct: 1    MEDSEGVLSFDFEGGLDSGPANPIASIPAIPSDNYGAATAAAPNTTN----TTTNTTNNS 56

Query: 2451 NHG------GRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQD 2290
            N G      GRRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQD
Sbjct: 57   NSGAADIQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQD 116

Query: 2289 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFN-YGPN 2113
            CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEV QKIQ L+S+N    N
Sbjct: 117  CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVVQKIQQLNSYNGVTSN 176

Query: 2112 RFLQQKNASYAQQTERSQFPHV-------SNTTNQGAAKQPTITEXXXXXXXXXXXXXXX 1954
            +  QQ+NA ++QQ E+S    +       +N   Q   +Q T T                
Sbjct: 177  KNFQQRNAGFSQQIEKSPNTIIKPSGTESANVQQQQQQQQQTQTPHLTNGQHQQPQQ--- 233

Query: 1953 XXXXXXXXXQSLPDALPNQGNKTASPLPQGLSR-----------YFIVKSCNRENLELSV 1807
                            PN  N+ A+PLPQG+S            YFIVKSCNRENLELSV
Sbjct: 234  ----------------PNPLNRIATPLPQGISSFFSCVSPSQFVYFIVKSCNRENLELSV 277

Query: 1806 QQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAH 1627
            QQGVWATQRSNE KLNEA DSA+NVILIFSVNRTRHFQGCAKM SKIG  VGGGNWK+AH
Sbjct: 278  QQGVWATQRSNEIKLNEALDSADNVILIFSVNRTRHFQGCAKMASKIGASVGGGNWKYAH 337

Query: 1626 GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 1513
            GTAHYGRNFSVKWLKLCELSFHKTRHLRNP+NENLPVK
Sbjct: 338  GTAHYGRNFSVKWLKLCELSFHKTRHLRNPFNENLPVK 375



 Score =  251 bits (641), Expect(2) = 0.0
 Identities = 157/339 (46%), Positives = 178/339 (52%), Gaps = 7/339 (2%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPSIGEQLASLLYLEPDSELMA+S+           KGVNPD G ENPDIVP
Sbjct: 376  ISRDCQELEPSIGEQLASLLYLEPDSELMAVSLAAEAKREEEKEKGVNPDSGGENPDIVP 435

Query: 1319 FXXXXXXXXXXXXXXXXSF-XXXXXXXXXXXXXXGMMWPPHMPLAHGGRPMPGVRGFPPV 1143
            F                SF               GMMWP H P+A G RP+PG+RGFPP+
Sbjct: 436  FEDNEEEEEEESEEEEESFGQPLGPAAQGRGRGRGMMWPSHNPMARGARPIPGIRGFPPM 495

Query: 1142 MMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV----- 978
            MMGADGF+YG VTPD   M                    DL GV   ++ GF P      
Sbjct: 496  MMGADGFSYGAVTPDSFGM-------------------PDLFGV---ASRGFPPYGPRFS 533

Query: 977  -DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXX 801
             D  G ASGMMF GRP QPG +F P  G GM+MGPGR PF+GGMG T +N +R  R    
Sbjct: 534  GDFTGAASGMMFPGRPSQPGAVF-PAGGFGMMMGPGRPPFIGGMGPTPSNLLRGPR---P 589

Query: 800  XXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYH 621
                       SQ+ SR +K+DQR   NDRNDR+                          
Sbjct: 590  GGMFAPFPAPSSQNNSRSVKRDQRAAANDRNDRH-------------------------- 623

Query: 620  PGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
                    + +G  NS  ND+SESEDEAPRRSRHGE KK
Sbjct: 624  --------NQFGAVNSIRNDESESEDEAPRRSRHGEGKK 654


>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum lycopersicum]
          Length = 689

 Score =  488 bits (1256), Expect(2) = 0.0
 Identities = 244/375 (65%), Positives = 264/375 (70%), Gaps = 2/375 (0%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            M++ EG LNFDFEGGLD                                      +    
Sbjct: 1    MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAASSANINPPTVPAVGGQGDVG 60

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
              G RRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT
Sbjct: 61   FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 120

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYG-PNRFLQQK 2095
             EDIKECNMYKLGFCPNGPDCRYRHAK+PGPPPPVEE+ QKIQHL+S NYG  NRF Q +
Sbjct: 121  IEDIKECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASNNYGYSNRFNQNR 180

Query: 2094 NASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSL- 1918
            NA+Y+ QT++SQ     N T+   A + T TE                          + 
Sbjct: 181  NANYSTQTDKSQASQAQNGTS--LAVKSTATETPIIQQHQPHQQVQPPQLQGGPTQAQIH 238

Query: 1917 PDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE 1738
            P+   NQ ++TA  LPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS E
Sbjct: 239  PNGQQNQADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVE 298

Query: 1737 NVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHK 1558
            NVILIFSVNRTRHFQGC KMTS+IG    GGNWKH HGTAHYGRNFS+KWLKLCELSF K
Sbjct: 299  NVILIFSVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSLKWLKLCELSFQK 358

Query: 1557 TRHLRNPYNENLPVK 1513
            T HLRNPYNENLPVK
Sbjct: 359  THHLRNPYNENLPVK 373



 Score =  235 bits (600), Expect(2) = 0.0
 Identities = 149/337 (44%), Positives = 177/337 (52%), Gaps = 5/337 (1%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELEPS+GEQLASLLYLEPDSELMAIS+           KGVNPD G +NPDIVP
Sbjct: 374  ISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRLEEKAKGVNPDNGKDNPDIVP 433

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXG---MMWPPHMPLAHGGRPMPGVRGFP 1149
            F                                    + WPP MP  HG RP PG+RGFP
Sbjct: 434  FEDNEEEEDEEEESEDEDENFDQGFGPAALGRGRGRGIAWPPIMPFGHGPRPPPGMRGFP 493

Query: 1148 PVMMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVDGA 969
            P MMG DGF+YG +TP+   M +                            MG  P    
Sbjct: 494  PGMMG-DGFSYGAMTPEGFPMTD-------------------------HFGMGPRPFPPY 527

Query: 968  GP--ASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXX 795
            GP  +S +MFHGR        PP  G GM++GPGR PF+GGMG  AT   R+GR      
Sbjct: 528  GPRFSSDLMFHGR--------PPAGGFGMMIGPGRPPFVGGMGPGATGPPRAGRAVRMHP 579

Query: 794  XXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHPG 615
                     SQ P R  K++QR P +DRNDR+S+  DQG+GQE      GP  +G +   
Sbjct: 580  SFIPPSSQPSQYPYR-AKREQRAPVSDRNDRFSS--DQGKGQEMMGSVNGP--DGVHMQI 634

Query: 614  LKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             K ++ + +G GNS  ND SESEDEAPRRSRHG+ KK
Sbjct: 635  GKSEHDNQFGAGNSLKNDGSESEDEAPRRSRHGDGKK 671


>gb|AHN05783.1| YTH domain-contained RNA binding protein 14 [Malus domestica]
          Length = 667

 Score =  506 bits (1303), Expect(2) = 0.0
 Identities = 253/378 (66%), Positives = 273/378 (72%), Gaps = 5/378 (1%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLD----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAE 2464
            MEDS+G LNFDFEGGLD                                   Q+  A   
Sbjct: 1    MEDSDGGLNFDFEGGLDAPATVSASAGPANTVPTSNYSVMQSDSAVTGLGANQAAAAPQP 60

Query: 2463 TVTVNHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 2284
                N  G RS+RQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV
Sbjct: 61   NQNANRTGGRSYRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 120

Query: 2283 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNY-GPNRF 2107
            YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEV QKIQHL+S+NY   ++F
Sbjct: 121  YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLTSYNYNNSSKF 180

Query: 2106 LQQKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXX 1927
             QQ+NA + QQ ++ Q     N        +PT  E                        
Sbjct: 181  YQQRNAGFPQQGDKHQPAQGPN----NFVGKPTTAEPGNVQQQQQQQLQQTQQHVGPTQT 236

Query: 1926 QSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 1747
            Q+LP+ L NQ N++A PLPQG SRYFIVKSCNRENLELSVQQG+WATQRSNE+KLNEAFD
Sbjct: 237  QTLPNGLANQANRSALPLPQGTSRYFIVKSCNRENLELSVQQGLWATQRSNESKLNEAFD 296

Query: 1746 SAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELS 1567
            SAENVILIFSVNRTRHFQGCAKM S+IG  VGGGNWK+AHGTAHYGRNFSVKWLKLCELS
Sbjct: 297  SAENVILIFSVNRTRHFQGCAKMMSRIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELS 356

Query: 1566 FHKTRHLRNPYNENLPVK 1513
            FHKTRHLRNPYNENLPVK
Sbjct: 357  FHKTRHLRNPYNENLPVK 374



 Score =  213 bits (543), Expect(2) = 0.0
 Identities = 149/344 (43%), Positives = 166/344 (48%), Gaps = 12/344 (3%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELE S+GEQLASLLYLEPDSELMAIS+           KGVNP+ G ENPDIVP
Sbjct: 375  ISRDCQELELSVGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPENGGENPDIVP 434

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXG---MMWPPHMPLAHGGRPMPGVRGFP 1149
            F                SF                  +MWPPHM L  GGRPMPG++GFP
Sbjct: 435  FEDNEEEEEEESEDEEDSFGQVPGAGNDGRGRGRGGGVMWPPHMALPRGGRPMPGMQGFP 494

Query: 1148 PVMMGADGFTY---GTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPV 978
            P MMG D   Y   G V P+   M                            +  GF P 
Sbjct: 495  PGMMGHDAMPYVPDGFVMPNPFGM----------------------------APRGFNPY 526

Query: 977  ------DGAGPASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSG 816
                  D  GP  GMMF GRPQQPG  FPP  G G +MGPGRAPFMGG+     +  R G
Sbjct: 527  GPRFSGDFTGPNPGMMFRGRPQQPG--FPP-GGFG-IMGPGRAPFMGGI-----HPGRGG 577

Query: 815  RXXXXXXXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVD 636
            R               SQ+P+RM K+D R    DR           +GQ+      GP D
Sbjct: 578  RPTGMSPMFPPPPPPSSQNPNRMPKRDPRGASTDR-----------KGQD----MSGPDD 622

Query: 635  EGKYHPGLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
            E              YG GNS  NDDSESEDEAPRRSRHG+ KK
Sbjct: 623  E------------THYGAGNSSRNDDSESEDEAPRRSRHGDGKK 654


>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum tuberosum]
          Length = 677

 Score =  484 bits (1246), Expect(2) = 0.0
 Identities = 246/380 (64%), Positives = 263/380 (69%), Gaps = 7/380 (1%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            M+D EG LNFDFEGGLD                                SV        V
Sbjct: 1    MDDGEGGLNFDFEGGLDTGPTHPTASVPVLQSAGHITTGPAPNA-----SVALVPPGGGV 55

Query: 2451 NHGG-------RRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 2293
              GG       RRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ
Sbjct: 56   GQGGDGSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 115

Query: 2292 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGPN 2113
            DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPV EV Q+IQ+L+S+ Y  N
Sbjct: 116  DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVVEVLQRIQNLTSYGYS-N 174

Query: 2112 RFLQQKNASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXX 1933
            RF Q +N +Y+ Q ++SQ P V N  NQ                                
Sbjct: 175  RFFQNRNTNYSTQADKSQIPQVPNVMNQAVKSTAAEPPIGQPHQPHQQQVQQPQHQGAPT 234

Query: 1932 XXQSLPDALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 1753
              Q+LP +   Q N+ A PLPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA
Sbjct: 235  QTQTLPSS---QQNQAAIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 291

Query: 1752 FDSAENVILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCE 1573
            FDS ENVIL+FS+NRTRHFQG AKMTS+IG    GGNWKH HGTAHYGRNFS+KWLKLCE
Sbjct: 292  FDSVENVILVFSINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSLKWLKLCE 351

Query: 1572 LSFHKTRHLRNPYNENLPVK 1513
            LSF KTRHLRNPYNENLPVK
Sbjct: 352  LSFQKTRHLRNPYNENLPVK 371



 Score =  234 bits (597), Expect(2) = 0.0
 Identities = 148/337 (43%), Positives = 173/337 (51%), Gaps = 5/337 (1%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELE S+GEQLASLLY+EPDSELMA+S+           KGVNPD G ENPDIVP
Sbjct: 372  ISRDCQELEISVGEQLASLLYVEPDSELMAVSLAAESKREEERAKGVNPDNGNENPDIVP 431

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXG---MMWPPHMPLAHGGRPMPGVRGFP 1149
            F                                    ++WPP +P   G RP PG+RGFP
Sbjct: 432  FEDNEEEEEEESEEEEEDEGFGQAFGPAALGRGRGRGIVWPPLVPFGRGARPFPGMRGFP 491

Query: 1148 PVMMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVDGA 969
            P MM +DGF+YG++TPD   M +                            MG  P    
Sbjct: 492  PGMM-SDGFSYGSMTPDGFPMPD-------------------------PYGMGGRPFGPF 525

Query: 968  GP--ASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXXX 795
            GP     MMFH RP       P   G GM+MGPGR PFMGGMG  A    R GR      
Sbjct: 526  GPRFPGDMMFHSRP-------PAAGGFGMMMGPGRPPFMGGMGPGAPGPPRGGRPMGIHP 578

Query: 794  XXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHPG 615
                     SQ+P   +KKDQR P N+RNDR+S+G DQGRGQE     GGP  EG ++P 
Sbjct: 579  SFIPPTPPPSQNP--RVKKDQRAPFNERNDRFSSGPDQGRGQEIAGSVGGPA-EGVHYPQ 635

Query: 614  LKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
             +          NS+ ND+SESEDEAPRRSRHG+ KK
Sbjct: 636  TE----------NSFRNDESESEDEAPRRSRHGDGKK 662


>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum lycopersicum]
          Length = 671

 Score =  485 bits (1249), Expect(2) = 0.0
 Identities = 245/373 (65%), Positives = 260/373 (69%)
 Frame = -3

Query: 2631 MEDSEGVLNFDFEGGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSVVAAAETVTV 2452
            M+D EG LNFDFEGGLD                                 +      V  
Sbjct: 1    MDDGEGGLNFDFEGGLDTGPTHPTASVPVIQAGPAPNASVAVVPPGGGVGLGGDGSFV-- 58

Query: 2451 NHGGRRSFRQTVCRHWLRGLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 2272
              G RRSFRQTVCRHWLR LCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT
Sbjct: 59   --GNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 116

Query: 2271 NEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGPNRFLQQKN 2092
            NEDIKECNM+KLGFCPNGPDCRYRHAK+PGPPPPV EV QKIQ+L+S  Y  NRF Q +N
Sbjct: 117  NEDIKECNMFKLGFCPNGPDCRYRHAKMPGPPPPVVEVLQKIQNLTSHGYS-NRFFQNRN 175

Query: 2091 ASYAQQTERSQFPHVSNTTNQGAAKQPTITEXXXXXXXXXXXXXXXXXXXXXXXXQSLPD 1912
             +Y+ Q ++SQ P V N  NQ      T                           Q+LP 
Sbjct: 176  TNYSTQADKSQIPQVPNVMNQAVKSTATEPPIGQPHQPHQQQVQQPQHQGPPTQTQTLPG 235

Query: 1911 ALPNQGNKTASPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 1732
                Q N+ A PLPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS ENV
Sbjct: 236  T---QQNQAAIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENV 292

Query: 1731 ILIFSVNRTRHFQGCAKMTSKIGEHVGGGNWKHAHGTAHYGRNFSVKWLKLCELSFHKTR 1552
            ILIFS+NRTRHFQG AKMTS+IG    GGNWKH HGTAHYGRNFSVKWLKLCELSF KTR
Sbjct: 293  ILIFSINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSVKWLKLCELSFQKTR 352

Query: 1551 HLRNPYNENLPVK 1513
            HLRNPYNENLPVK
Sbjct: 353  HLRNPYNENLPVK 365



 Score =  227 bits (578), Expect(2) = 0.0
 Identities = 149/338 (44%), Positives = 174/338 (51%), Gaps = 6/338 (1%)
 Frame = -1

Query: 1499 ISRDCQELEPSIGEQLASLLYLEPDSELMAISVXXXXXXXXXXXKGVNPDEGAENPDIVP 1320
            ISRDCQELE S+GEQLASLLY+EPDSELMAIS+           KGVNPD G ENPDIVP
Sbjct: 366  ISRDCQELEISVGEQLASLLYVEPDSELMAISLAAESKREEERAKGVNPDNGNENPDIVP 425

Query: 1319 FXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXG----MMWPPHMPLAHGGRPMPGVRGF 1152
            F                                G    ++WPP +P   G RP PG+RGF
Sbjct: 426  FEDNEEEEEEESEEEDEEDEGFGQALGPAALDRGRGRGIVWPPLVPF-RGARPFPGMRGF 484

Query: 1151 PPVMMGADGFTYGTVTPDRLHMQELXXXXXXXXXXXXXXXXGDLSGVGQSSAMGFTPVDG 972
            PP +M +DGF+YG++TPD   M +                            MG  P   
Sbjct: 485  PPGIM-SDGFSYGSMTPDGFPMPD-------------------------PYGMGGRPFGP 518

Query: 971  AGP--ASGMMFHGRPQQPGPIFPPTSGLGMVMGPGRAPFMGGMGMTATNHIRSGRXXXXX 798
             GP     MMFH RP       P   G GM+MGP R PFMGGMG  A    R GR     
Sbjct: 519  FGPRFPGDMMFHSRP-------PAAGGFGMMMGPARPPFMGGMGPGAPGPPRGGRPMGMH 571

Query: 797  XXXXXXXXXLSQDPSRMMKKDQRRPGNDRNDRYSTGLDQGRGQETESPSGGPVDEGKYHP 618
                      SQ+P   +KKDQR P N+RNDR+S+G DQGRGQET     GP DEG ++P
Sbjct: 572  PSFTPPPPPPSQNP--RVKKDQRAPFNERNDRFSSGPDQGRGQETAGSVVGP-DEGVHYP 628

Query: 617  GLKVQNKDSYGGGNSYGNDDSESEDEAPRRSRHGERKK 504
              +          NS+ ND+SESEDEAPRRSRHG+ KK
Sbjct: 629  QTE----------NSFRNDESESEDEAPRRSRHGDGKK 656