BLASTX nr result
ID: Cocculus23_contig00007074
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00007074 (809 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28010.3| unnamed protein product [Vitis vinifera] 353 5e-95 ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 353 5e-95 ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 348 2e-93 ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 347 4e-93 ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 347 4e-93 ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 344 2e-92 ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 332 8e-89 ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 332 8e-89 ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 330 5e-88 ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 327 2e-87 ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 327 4e-87 ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 323 4e-86 ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 312 1e-82 ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 310 5e-82 ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 309 7e-82 gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana] 309 7e-82 ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 305 1e-80 ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 305 1e-80 ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 305 1e-80 ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 305 2e-80 >emb|CBI28010.3| unnamed protein product [Vitis vinifera] Length = 929 Score = 353 bits (905), Expect = 5e-95 Identities = 170/267 (63%), Positives = 205/267 (76%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE+DPKLSD T NS+EI TSN+P + YLS+ LIALL+YGGVPNEYFM+LL AL+DA Sbjct: 426 VETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAP 485 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 +V+ +KR AL V LR+GEMDD + +RM+L GIP+DEP+L LS ++ EERK L+ GK+P Sbjct: 486 SVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLP 545 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + D +YLMGTADPTG LK+DEVCIIL GQ+ G+VLVY++PG HFGDIHVL ATY + + Sbjct: 546 VNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALE 605 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNES 90 + VGNAKY IFFP KGPRSLADE+A DFDGDMYWVSRN QLL YFRA PW Sbjct: 606 EFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRH 665 Query: 89 VCDRKPIDFKPAELEDRILQKFLTTRF 9 V ++P DF P ELE + Q FLTTRF Sbjct: 666 VPSKRPTDFSPDELEHELFQLFLTTRF 692 >ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis vinifera] Length = 943 Score = 353 bits (905), Expect = 5e-95 Identities = 170/267 (63%), Positives = 205/267 (76%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE+DPKLSD T NS+EI TSN+P + YLS+ LIALL+YGGVPNEYFM+LL AL+DA Sbjct: 440 VETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAP 499 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 +V+ +KR AL V LR+GEMDD + +RM+L GIP+DEP+L LS ++ EERK L+ GK+P Sbjct: 500 SVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLP 559 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + D +YLMGTADPTG LK+DEVCIIL GQ+ G+VLVY++PG HFGDIHVL ATY + + Sbjct: 560 VNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALE 619 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNES 90 + VGNAKY IFFP KGPRSLADE+A DFDGDMYWVSRN QLL YFRA PW Sbjct: 620 EFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRH 679 Query: 89 VCDRKPIDFKPAELEDRILQKFLTTRF 9 V ++P DF P ELE + Q FLTTRF Sbjct: 680 VPSKRPTDFSPDELEHELFQLFLTTRF 706 >ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa] gi|550336519|gb|ERP59562.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa] Length = 866 Score = 348 bits (892), Expect = 2e-93 Identities = 169/267 (63%), Positives = 213/267 (79%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE+DPKLS+ + NSLEIV TS RP K +LS++LIALL+YGGVP E+FM +L +AL+DA Sbjct: 373 VETDPKLSNTFSKNSLEIVGTSCRPKKTFLSKNLIALLSYGGVPEEFFMGILNNALEDAH 432 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 + NK+ AL V L YG+MDD + + M+ CGIPL+EPYLQ HLS+L +EE+KSLKGGKIP Sbjct: 433 GILSNKKAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQHHLSILKKEEKKSLKGGKIP 492 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + +SYYLMGTADPTGLL++DEVCIIL GQ++G+VLVYR PG HFGDIH+L ATY +E+ Sbjct: 493 VPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVLVYRNPGLHFGDIHILKATYVRELE 552 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNES 90 D VGNAKY IFFP KGPRSLADE++GGDFDGDM++VSRNP+LL+ F+ PWT S+ + Sbjct: 553 DFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPRLLENFKQTEPWTPSTSTPN 612 Query: 89 VCDRKPIDFKPAELEDRILQKFLTTRF 9 V +RKP +F ELE + + FL RF Sbjct: 613 VPNRKPSEFSDEELEVELFKLFLRNRF 639 >ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa] gi|550334280|gb|ERP58267.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa] Length = 877 Score = 347 bits (889), Expect = 4e-93 Identities = 168/267 (62%), Positives = 212/267 (79%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE+DPKLS + NSLEIV TS+RP K +LS++LIALL+YGGVP E+FM ++ +AL+DA Sbjct: 373 VETDPKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAH 432 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 + NK AL V L YG+MDD + + M+ CGIPL+EPYLQ LS+L++EE+KSLKGGKIP Sbjct: 433 GILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIP 492 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + +SYYLMGTADPTGLL++DEVCIIL GQI+G+VL+YR PG HFGDIH+L ATY +E+ Sbjct: 493 VPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELE 552 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNES 90 D VGNAKY IFFP KGPRSLADE++GGDFDGDM++VSRNPQLL+ F+ PWT S+ + Sbjct: 553 DFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPN 612 Query: 89 VCDRKPIDFKPAELEDRILQKFLTTRF 9 V +RKP +F ELE + + FL RF Sbjct: 613 VPNRKPSEFSDEELEVELFKLFLRNRF 639 >ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa] gi|550334279|gb|ERP58266.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa] Length = 899 Score = 347 bits (889), Expect = 4e-93 Identities = 168/267 (62%), Positives = 212/267 (79%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE+DPKLS + NSLEIV TS+RP K +LS++LIALL+YGGVP E+FM ++ +AL+DA Sbjct: 395 VETDPKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAH 454 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 + NK AL V L YG+MDD + + M+ CGIPL+EPYLQ LS+L++EE+KSLKGGKIP Sbjct: 455 GILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIP 514 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + +SYYLMGTADPTGLL++DEVCIIL GQI+G+VL+YR PG HFGDIH+L ATY +E+ Sbjct: 515 VPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELE 574 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNES 90 D VGNAKY IFFP KGPRSLADE++GGDFDGDM++VSRNPQLL+ F+ PWT S+ + Sbjct: 575 DFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPN 634 Query: 89 VCDRKPIDFKPAELEDRILQKFLTTRF 9 V +RKP +F ELE + + FL RF Sbjct: 635 VPNRKPSEFSDEELEVELFKLFLRNRF 661 >ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis sativus] Length = 1056 Score = 344 bits (883), Expect = 2e-92 Identities = 169/267 (63%), Positives = 207/267 (77%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE DP L + T NSLE+V TSN P + +LSR+LIALLNYGGVP EYFM++L+ ALKD Q Sbjct: 554 VEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQ 613 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 V +KR AL V + GEMDDFL +RM+L GIPLDE YLQ+ LSVL++EE+KSLK G++ Sbjct: 614 GVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLH 673 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + + YYLMGT DPT L++ EVC+IL +GQINGKVLVYR PG HFGDIHVLTA Y +++ Sbjct: 674 VPECYYLMGTVDPTFTLESGEVCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLV 733 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNES 90 +VGNAKY IFF +KGPRS+ADEIAGGDFDGDMYWVSRN QLL+YFR PW S E Sbjct: 734 PVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEV 793 Query: 89 VCDRKPIDFKPAELEDRILQKFLTTRF 9 V ++KP +F ELE+ + + FL+TRF Sbjct: 794 VTNKKPKEFSADELENELFKLFLSTRF 820 >ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina] gi|568843311|ref|XP_006475557.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like isoform X2 [Citrus sinensis] gi|557554498|gb|ESR64512.1| hypothetical protein CICLE_v10007331mg [Citrus clementina] Length = 1013 Score = 332 bits (852), Expect = 8e-89 Identities = 169/269 (62%), Positives = 207/269 (76%), Gaps = 2/269 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V++D LSD T NSLE+V TSN+P K YLSR+LIALL+YGGVP +F+D+L +AL DA+ Sbjct: 507 VKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDAR 566 Query: 629 NVRYNKRNALTVFLRYGEMD-DFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKI 453 V NKRNAL V YG MD DF +RM+L GI LDEPYLQ LS+L++EE+KSL+ GK+ Sbjct: 567 GVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKL 626 Query: 452 PIGDSYYLMGTADPTGLLKADEVCIILADGQING-KVLVYRYPGQHFGDIHVLTATYCKE 276 P+ +SYYLMGT DPTG+LK++EVCIIL DGQ++ KVLVYR PG HFGDIHVL ATY KE Sbjct: 627 PVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVKE 686 Query: 275 IGDIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPN 96 + D VG +KY IFFP GPRSLADEIAGGDFDGDMY+VSRNP+LL +F+ W +S N Sbjct: 687 LEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELLKHFKESERWMSTSKN 746 Query: 95 ESVCDRKPIDFKPAELEDRILQKFLTTRF 9 S +++PIDF ELE + + FL TRF Sbjct: 747 LS-ANKRPIDFSLEELESELFKLFLNTRF 774 >ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina] gi|568843309|ref|XP_006475556.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like isoform X1 [Citrus sinensis] gi|557554497|gb|ESR64511.1| hypothetical protein CICLE_v10007331mg [Citrus clementina] Length = 1015 Score = 332 bits (852), Expect = 8e-89 Identities = 169/269 (62%), Positives = 207/269 (76%), Gaps = 2/269 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V++D LSD T NSLE+V TSN+P K YLSR+LIALL+YGGVP +F+D+L +AL DA+ Sbjct: 509 VKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDAR 568 Query: 629 NVRYNKRNALTVFLRYGEMD-DFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKI 453 V NKRNAL V YG MD DF +RM+L GI LDEPYLQ LS+L++EE+KSL+ GK+ Sbjct: 569 GVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKL 628 Query: 452 PIGDSYYLMGTADPTGLLKADEVCIILADGQING-KVLVYRYPGQHFGDIHVLTATYCKE 276 P+ +SYYLMGT DPTG+LK++EVCIIL DGQ++ KVLVYR PG HFGDIHVL ATY KE Sbjct: 629 PVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVKE 688 Query: 275 IGDIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPN 96 + D VG +KY IFFP GPRSLADEIAGGDFDGDMY+VSRNP+LL +F+ W +S N Sbjct: 689 LEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELLKHFKESERWMSTSKN 748 Query: 95 ESVCDRKPIDFKPAELEDRILQKFLTTRF 9 S +++PIDF ELE + + FL TRF Sbjct: 749 LS-ANKRPIDFSLEELESELFKLFLNTRF 776 >ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda] gi|548857326|gb|ERN15132.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda] Length = 988 Score = 330 bits (845), Expect = 5e-88 Identities = 162/269 (60%), Positives = 203/269 (75%), Gaps = 1/269 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE D S +P+ NS E+V TSNRP LSR LI LL++GGVP FM L+ +AL D Q Sbjct: 487 VERDTDFSRLPSFNSFEMVGTSNRPRGAALSRYLITLLSHGGVPKSCFMFLIQAALDDVQ 546 Query: 629 NVRYNKRNALTVFLRYGEM-DDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKI 453 NVRY+K+ ALT ++Y E+ D+ L +RM+ CG+PL+EPYLQ LS+L++EERK LK GK+ Sbjct: 547 NVRYSKKLALTAAVKYQEISDNLLVARMIFCGLPLEEPYLQHRLSILMKEERKGLKEGKV 606 Query: 452 PIGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEI 273 + +SYYLMGTADPTG LK +EVCIIL GQI+GKVLVYR+PG HFGDIHV TATY +++ Sbjct: 607 LLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGKVLVYRHPGLHFGDIHVFTATYIEDL 666 Query: 272 GDIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNE 93 +IVGNAK+ IFF T+GPRS ADEIA GDFDGDMYW+S NP+LL YF+AG PW SS + Sbjct: 667 VEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMYWISTNPELLHYFKAGPPWERSSSEK 726 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTRFN 6 RKPI++ P ELE + FL +RF+ Sbjct: 727 PPPQRKPIEYSPDELETELFDLFLESRFH 755 >ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata subsp. lyrata] Length = 981 Score = 327 bits (839), Expect = 2e-87 Identities = 151/269 (56%), Positives = 206/269 (76%), Gaps = 1/269 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V DP LS+ T N+LE+V+TSN P + LS++L+ALL+YGG+PNE+F+D+LL+ L++++ Sbjct: 479 VSKDPSLSNFSTFNALEVVTTSNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESK 538 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 ++ YNK AL V L YGEMDD ++M+L GIPLDEP+L+ HLS+L++ E+ LK G++P Sbjct: 539 SIFYNKHAALNVALNYGEMDDQNAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLP 598 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + +SYYLMGT DPTG LK DEVC+IL GQI+G+VLVYR PG HFGDIH+L ATY K + Sbjct: 599 VTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALE 658 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPW-TCSSPNE 93 + VGN+KY +FFP KGPRSL DEIAGGDFDGDMY++SRNP+LL++F+ PW + + P++ Sbjct: 659 EYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSK 718 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTRFN 6 S R P P ELE+ + + FL F+ Sbjct: 719 SNSGRAPSQLSPEELEEELFEMFLKAGFH 747 >ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana] gi|322967572|sp|O82188.2|RDR5_ARATH RecName: Full=Probable RNA-dependent RNA polymerase 5; Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase 5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana] Length = 977 Score = 327 bits (837), Expect = 4e-87 Identities = 151/269 (56%), Positives = 206/269 (76%), Gaps = 1/269 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V DP LS+ T N+LE+V+TSN P + LS++L+ALL+YGG+PNE+F+D+LL+ L++++ Sbjct: 475 VSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESK 534 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 ++ YNKR AL L YGEMDD ++M+L GIPLDEP+L+ +LS+L++ E+ LK GK+P Sbjct: 535 SIFYNKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLP 594 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + +SYYLMGT DPTG LK DEVC+IL GQI+G+VLVYR PG HFGDIH+L ATY K + Sbjct: 595 VTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALE 654 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPW-TCSSPNE 93 + VGN+K+ +FFP KGPRSL DEIAGGDFDGDMY++SRNP+LL+ F+ PW + + P++ Sbjct: 655 EYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSK 714 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTRFN 6 S R P P ELE+ + + FLT F+ Sbjct: 715 SNSGRAPSQLSPEELEEELFEMFLTAGFH 743 >ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum] gi|557110064|gb|ESQ50361.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum] Length = 988 Score = 323 bits (829), Expect = 4e-86 Identities = 156/269 (57%), Positives = 201/269 (74%), Gaps = 1/269 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V D LS+ T NSLE+V+TSN P + LSR+L+ALL+YGGVPNE+F+DLLL+ +++ + Sbjct: 487 VSKDRALSNFSTFNSLEVVTTSNPPKRTKLSRNLVALLSYGGVPNEFFLDLLLNTMEETK 546 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 + NKR AL L +G+MDD ++M+L GIPLDEP+L+ LS+L E+ LK G++P Sbjct: 547 TIFNNKRAALKAALNHGDMDDQNAAQMILVGIPLDEPHLKDRLSILSNIEKNDLKAGRLP 606 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + +SYYLMGT DPTG LK DEVC+IL GQI+G VLVYR PG HFGDIHVL ATY K + Sbjct: 607 VTESYYLMGTVDPTGELKEDEVCVILESGQISGDVLVYRNPGVHFGDIHVLKATYVKALE 666 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPW-TCSSPNE 93 + VGN+KY +FFP KGPRSL DEIAGGDFDGDMY++SRNP+LL+ F+ PW + S P++ Sbjct: 667 EYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEQFKPSEPWVSLSPPSK 726 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTRFN 6 S RKPIDF P ELE+ + FL RF+ Sbjct: 727 SNSTRKPIDFSPEELEEELFDMFLKARFH 755 >ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max] Length = 988 Score = 312 bits (799), Expect = 1e-82 Identities = 154/267 (57%), Positives = 196/267 (73%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE DP + + + NSLE+V+TSN+P + YLS+ LIALL++GGVPNE+FMDLL S ++DA Sbjct: 484 VEKDPSVH-MQSINSLEVVTTSNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDAN 542 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 +V NKR+AL + GE D++ + M+LCGIPLDEP+L+ HLS REE+K L+GGK+ Sbjct: 543 HVYSNKRSALRASINCGEKDEYNAAEMILCGIPLDEPFLKHHLSRFAREEKKKLRGGKLY 602 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 + D +YLMGT DPTG LK ++VCII + QI G VLVYR PG HFGDIH + ATY KE+ Sbjct: 603 MPDCFYLMGTVDPTGHLKKNQVCIIHENSQIVGDVLVYRNPGLHFGDIHKMDATYVKELE 662 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNES 90 VG++KYGIFFP G RS+ADEIAGGDFDGD YWVS +PQLL YFR G PW +S Sbjct: 663 SYVGHSKYGIFFPRVGTRSVADEIAGGDFDGDTYWVSNHPQLLQYFRKGDPWIENSVPLD 722 Query: 89 VCDRKPIDFKPAELEDRILQKFLTTRF 9 +KP +F P ELE+ + + FL TRF Sbjct: 723 SSVKKPSEFSPEELEEELFRLFLKTRF 749 >ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella] gi|482565607|gb|EOA29796.1| hypothetical protein CARUB_v10012890mg [Capsella rubella] Length = 998 Score = 310 bits (793), Expect = 5e-82 Identities = 149/268 (55%), Positives = 198/268 (73%), Gaps = 1/268 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V D L + T NSLE+V+TSN P LSR+LIALL+YGGVPN++F+++L L++++ Sbjct: 492 VYEDQALLNFSTFNSLEVVNTSNPPKMTRLSRNLIALLSYGGVPNDFFLNILRKTLEESK 551 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 + Y++R A+ + YG+MDD + M+L IPLDEP+L+ LS+L++ E+ +LK G++P Sbjct: 552 TIFYSERAAIKAAINYGDMDDQNTAEMILVDIPLDEPHLKDRLSILLKTEKNALKEGRLP 611 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 IG+SYYLMGT DPTG LK +EVC+IL GQI+G VLVYR PG HFGDIHVL ATY K + Sbjct: 612 IGESYYLMGTVDPTGELKENEVCVILETGQISGNVLVYRNPGLHFGDIHVLKATYVKALE 671 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSS-PNE 93 D VGN+KY +FFP KGPRSL DEIAGGDFDGDMY++SRNPQLL++F+ PW SS P++ Sbjct: 672 DYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPQLLEHFKPSEPWVSSSKPSK 731 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTRF 9 RKP + ELE+ + + FL RF Sbjct: 732 VYSGRKPSELSHEELEEELFKLFLDARF 759 >ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana] gi|322967566|sp|O82190.2|RDR3_ARATH RecName: Full=Probable RNA-dependent RNA polymerase 3; Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase 3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana] Length = 992 Score = 309 bits (792), Expect = 7e-82 Identities = 149/268 (55%), Positives = 198/268 (73%), Gaps = 1/268 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V D LS++ T NSLE+V+TSN P K LSR+L+ALL+YGGVPN++F+++L + L++++ Sbjct: 488 VYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESK 547 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 + Y++R A + YG DD + M+L GIPLDEPYL+ LS L++ ER +LK G+ P Sbjct: 548 TIFYSERAAFKAAINYG--DDQYTADMILVGIPLDEPYLKDRLSYLLKTERNALKAGRFP 605 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 I +SYY+MGT DPTG LK +E+C+IL GQI+G VLVYR PG HFGDIHVL ATY K + Sbjct: 606 IDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALE 665 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSS-PNE 93 D VGNAK+ +FFP KGPRSL DEIAGGDFDGDMY++SRNP+LL++F+ PW SS P++ Sbjct: 666 DYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSK 725 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTRF 9 C RKP + ELE+ + + FL RF Sbjct: 726 IYCGRKPSELSEEELEEELFKMFLKARF 753 >gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana] Length = 966 Score = 309 bits (792), Expect = 7e-82 Identities = 149/268 (55%), Positives = 198/268 (73%), Gaps = 1/268 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V D LS++ T NSLE+V+TSN P K LSR+L+ALL+YGGVPN++F+++L + L++++ Sbjct: 462 VYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESK 521 Query: 629 NVRYNKRNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIP 450 + Y++R A + YG DD + M+L GIPLDEPYL+ LS L++ ER +LK G+ P Sbjct: 522 TIFYSERAAFKAAINYG--DDQYTADMILVGIPLDEPYLKDRLSYLLKTERNALKAGRFP 579 Query: 449 IGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIG 270 I +SYY+MGT DPTG LK +E+C+IL GQI+G VLVYR PG HFGDIHVL ATY K + Sbjct: 580 IDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALE 639 Query: 269 DIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSS-PNE 93 D VGNAK+ +FFP KGPRSL DEIAGGDFDGDMY++SRNP+LL++F+ PW SS P++ Sbjct: 640 DYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSK 699 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTRF 9 C RKP + ELE+ + + FL RF Sbjct: 700 IYCGRKPSELSEEELEEELFKMFLKARF 727 >ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria vesca subsp. vesca] Length = 1405 Score = 305 bits (782), Expect = 1e-80 Identities = 161/269 (59%), Positives = 194/269 (72%), Gaps = 2/269 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 V++DP +S+ T NSLEIV TS P +LSR LIALL +GGVP E+FM +L AL+D+ Sbjct: 904 VKTDPVISNNQTLNSLEIVGTSTPPRNTHLSRILIALLVHGGVPEEFFMQILNKALEDSH 963 Query: 629 NVRYNKRNALTVFLRYGEMDD-FLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKI 453 V KR AL V +YGEMDD FL M+ GIPL+E YL++ LSVL++EE SL+ G++ Sbjct: 964 GVFCKKRAALKVAEKYGEMDDNFLGRLMISFGIPLEESYLRYRLSVLMKEENNSLRKGRL 1023 Query: 452 PIGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEI 273 I DSY LMGTADPTG LK DEVC DGQ++GKVLVYRYPG H GDIHVL ATY KEI Sbjct: 1024 YIPDSYNLMGTADPTGTLKEDEVC----DGQLSGKVLVYRYPGLHIGDIHVLKATYVKEI 1079 Query: 272 GDIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPW-TCSSPN 96 IVGNAKYGIFF KGPRS+ADE+ GGDFDGD+YWVSRNPQLL++++ PW S Sbjct: 1080 EYIVGNAKYGIFFSCKGPRSIADEMGGGDFDGDLYWVSRNPQLLEWYKPSEPWIEASIST 1139 Query: 95 ESVCDRKPIDFKPAELEDRILQKFLTTRF 9 + R P D P +LED + + FLTTRF Sbjct: 1140 KKNPSRCPSDHSPEDLEDVLFRSFLTTRF 1168 >ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum lycopersicum] Length = 1011 Score = 305 bits (782), Expect = 1e-80 Identities = 150/267 (56%), Positives = 197/267 (73%), Gaps = 1/267 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE DP +S +PT +SLEIV+ S+RPNK YLS++LI+LL+YGGV EYFM+LL SAL++ + Sbjct: 508 VEIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETK 567 Query: 629 NVRYNKRNALTVFLRYGEMDD-FLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKI 453 V KR AL V + Y EMDD L +RM+ GIPL+EP+L LS L + ER L+GGK+ Sbjct: 568 QVYLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKL 627 Query: 452 PIGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEI 273 PI DS+YLMGTADPTG+L+++EVC+IL +GQ++G+VLVYR PG HFGD+HV+ A Y +E+ Sbjct: 628 PISDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEEL 687 Query: 272 GDIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNE 93 D+VG+AKYGIFF TKGPRS A EIA GDFDGDMYWVS N +L+D + PW Sbjct: 688 ADVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVSINRKLVDSYTTSRPWIRMHSTP 747 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTR 12 + +KP +F ELE + ++FL + Sbjct: 748 NAVSKKPSEFSADELEYELFRQFLEAK 774 >ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella] gi|482565615|gb|EOA29804.1| hypothetical protein CARUB_v10012898mg [Capsella rubella] Length = 982 Score = 305 bits (781), Expect = 1e-80 Identities = 143/263 (54%), Positives = 198/263 (75%), Gaps = 1/263 (0%) Frame = -1 Query: 791 LSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQNVRYNK 612 L ++ T N+LE+V+TS P + LSR+L+ALL+YGG+P+E+F+D+L + L++++ + YNK Sbjct: 488 LPNISTFNTLEVVNTSFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLEESKAIFYNK 547 Query: 611 RNALTVFLRYGEMDDFLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKIPIGDSYY 432 R AL L YGEMDD ++M+L GIPLDEP+L+ LS ++ E+ LK G++P+ +SYY Sbjct: 548 RAALNAALSYGEMDDQNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYY 607 Query: 431 LMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEIGDIVGNA 252 LMGT DPTG LK DEVC+IL GQI+G+VLVYR PG HFGDIHVL ATY K + + VGN+ Sbjct: 608 LMGTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNS 667 Query: 251 KYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPW-TCSSPNESVCDRK 75 K+ +FFP KGPRSL DEIAGGDFDGD+Y++SRNP+LL++F+ PW + + P++S R Sbjct: 668 KFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSNSARG 727 Query: 74 PIDFKPAELEDRILQKFLTTRFN 6 P F P ELE+ + + FL F+ Sbjct: 728 PCQFSPEELEEELFEMFLKAGFH 750 >ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum tuberosum] Length = 911 Score = 305 bits (780), Expect = 2e-80 Identities = 149/267 (55%), Positives = 198/267 (74%), Gaps = 1/267 (0%) Frame = -1 Query: 809 VESDPKLSDVPTANSLEIVSTSNRPNKCYLSRSLIALLNYGGVPNEYFMDLLLSALKDAQ 630 VE DP +S +PT +SLEIV+ S+RPNK YLS++LI+LL+YGGV EYFM+LL SAL++ + Sbjct: 510 VEIDPAISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVQKEYFMELLGSALEETK 569 Query: 629 NVRYNKRNALTVFLRYGEMDD-FLCSRMVLCGIPLDEPYLQFHLSVLIREERKSLKGGKI 453 V KR AL V + Y EMDD L +RM+ GIPL+EP+L+ LS L + ER L+GGK+ Sbjct: 570 QVYLRKRAALKVVINYREMDDDCLTARMISSGIPLNEPHLRARLSRLAKIERTKLRGGKL 629 Query: 452 PIGDSYYLMGTADPTGLLKADEVCIILADGQINGKVLVYRYPGQHFGDIHVLTATYCKEI 273 PI DS+YLMGTADPTG+L+++EVC+IL +GQI+G+VLVYR PG HFGD+HV+ A Y +E+ Sbjct: 630 PISDSFYLMGTADPTGVLESNEVCVILDNGQISGRVLVYRNPGLHFGDVHVMKARYVEEL 689 Query: 272 GDIVGNAKYGIFFPTKGPRSLADEIAGGDFDGDMYWVSRNPQLLDYFRAGAPWTCSSPNE 93 D+VG+AKYGIFF TKGPRS A EIA GDFDGDMYWVS N +++D + PW+ Sbjct: 690 ADVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWSRMHSTP 749 Query: 92 SVCDRKPIDFKPAELEDRILQKFLTTR 12 +KP +F +LE + ++FL + Sbjct: 750 KAVSKKPSEFSADKLEYELFRQFLEAK 776