BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00007013
         (598 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [A...   282   6e-74
ref|XP_002298921.2| hypothetical protein POPTR_0001s38850g [Popu...   276   2e-72
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   267   2e-69
ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...   263   3e-68
ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citr...   262   5e-68
ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containi...   261   1e-67
ref|XP_007022117.1| Pentatricopeptide repeat (PPR) superfamily p...   260   2e-67
ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containi...   259   3e-67
ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containi...   255   6e-66
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...   255   8e-66
gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis]     253   3e-65
gb|EMT16192.1| hypothetical protein F775_07734 [Aegilops tauschii]    249   5e-64
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....   240   2e-61
dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]    240   3e-61
ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Caps...   239   3e-61
ref|XP_004301959.1| PREDICTED: pentatricopeptide repeat-containi...   239   3e-61
ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutr...   239   4e-61
ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [S...   239   4e-61
ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containi...   236   5e-60

>ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [Amborella trichopoda]
           gi|548853542|gb|ERN11525.1| hypothetical protein
           AMTR_s00022p00130870 [Amborella trichopoda]
          Length = 404

 Score =  282 bits (721), Expect = 6e-74
 Identities = 133/199 (66%), Positives = 156/199 (78%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AKQ++++HEVYL A QLGV +DTCC NILIK LC+C  LDAAF LL E PKQG +PN  T
Sbjct: 183 AKQYEMVHEVYLSASQLGVAVDTCCFNILIKALCQCGDLDAAFSLLQEAPKQGCRPNATT 242

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           Y+T+MH LC+ GRV EAFELYERMER  C PDTI FN LISGLCKQG V   M L   M 
Sbjct: 243 YATLMHGLCKSGRVSEAFELYERMEREVCYPDTITFNILISGLCKQGSVKQAMDLLHTMK 302

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PNSGSYQA++YGLLD+  FVEA   +  M+SKG+FPSFLSYK+LI GLCD +LL 
Sbjct: 303 LKGCYPNSGSYQALIYGLLDASDFVEANKLLSLMVSKGIFPSFLSYKMLIDGLCDMDLLR 362

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           DVD+VL +M+ QGF+P+MG
Sbjct: 363 DVDAVLTQMINQGFIPRMG 381



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDA-AFHLLDELPKQGLKPNVR 177
           AK+FD I E+         ++       LIK      K    A ++L  +P     P+VR
Sbjct: 112 AKKFDAIEELLTRMKMEKCKLSDEFFRHLIKLYANIGKNAVQAVNILYRMPDFHCWPSVR 171

Query: 178 TYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRM 357
           T++++++ L    + E   E+Y    + G   DT  FN LI  LC+ G +     L    
Sbjct: 172 TFNSVLNMLVCAKQYEMVHEVYLSASQLGVAVDTCCFNILIKALCQCGDLDAAFSLLQEA 231

Query: 358 GLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLL 537
             +GC PN+ +Y  +++GL  S +  EA    ++M  +  +P  +++ +LI GLC +  +
Sbjct: 232 PKQGCRPNATTYATLMHGLCKSGRVSEAFELYERMEREVCYPDTITFNILISGLCKQGSV 291

Query: 538 EDVDSVLKRMVQQGFVPKMG 597
           +    +L  M  +G  P  G
Sbjct: 292 KQAMDLLHTMKLKGCYPNSG 311



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/126 (29%), Positives = 57/126 (45%)
 Frame = +1

Query: 64  DTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELY 243
           DT   NILI GLC+   +  A  LL  +  +G  PN  +Y  +++ L +     EA +L 
Sbjct: 274 DTITFNILISGLCKQGSVKQAMDLLHTMKLKGCYPNSGSYQALIYGLLDASDFVEANKLL 333

Query: 244 ERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDS 423
             M   G  P  + +  LI GLC    + D   +  +M  +G  P  G++  IL  L   
Sbjct: 334 SLMVSKGIFPSFLSYKMLIDGLCDMDLLRDVDAVLTQMINQGFIPRMGTWMRILESLFRG 393

Query: 424 KKFVEA 441
           +   +A
Sbjct: 394 RTCEDA 399


>ref|XP_002298921.2| hypothetical protein POPTR_0001s38850g [Populus trichocarpa]
           gi|550349209|gb|EEE83726.2| hypothetical protein
           POPTR_0001s38850g [Populus trichocarpa]
          Length = 292

 Score =  276 bits (707), Expect = 2e-72
 Identities = 134/199 (67%), Positives = 163/199 (81%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK FDV+HEVYL AP LG+EID C LNILIKGLCE   L+AAF++LDE PKQ  +PNVRT
Sbjct: 64  AKVFDVVHEVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFPKQRCEPNVRT 123

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +ST+MH LC++G+VEEAF L ERME+ G D DTI FN LISGL KQG+V +G++L +RM 
Sbjct: 124 FSTLMHGLCKKGKVEEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVEGLELLERMN 183

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           +KGC PN+GSYQ ILYGLLD++K+VE K FM +MI +GV PSF+SYK L+HGLC E LL 
Sbjct: 184 IKGCEPNAGSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLVHGLCKERLLR 243

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           D+D VLK+M +QGFVPKMG
Sbjct: 244 DLDWVLKQMARQGFVPKMG 262



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
 Frame = +1

Query: 112 KLDAAFHLLDELPK-QGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIF 288
           ++  A   L ++PK     PNV++++ +++ L      +   E+Y +    G + D    
Sbjct: 30  RIKKAMETLFDMPKGYNCWPNVKSFNLVLNLLVSAKVFDVVHEVYLQAPMLGIEIDVCSL 89

Query: 289 NTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMIS 468
           N LI GLC+ G +     + D    + C PN  ++  +++GL    K  EA   +++M  
Sbjct: 90  NILIKGLCENGDLEAAFNVLDEFPKQRCEPNVRTFSTLMHGLCKKGKVEEAFGLLERMEK 149

Query: 469 KGVFPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
           +G+    +++ +LI GL  +  + +   +L+RM  +G  P  G
Sbjct: 150 EGIDADTITFNILISGLRKQGKVVEGLELLERMNIKGCEPNAG 192


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  267 bits (683), Expect = 1e-69
 Identities = 129/197 (65%), Positives = 159/197 (80%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK+FDV+H+VY GAP+LGVEID CCLNIL+KGLC    +DAA  LLDE PKQ  +PNVRT
Sbjct: 170 AKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRT 229

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +ST+MH LCE GRVE A  L ERMER G  PDT++FN LISGL K+GRV +GM+L  RM 
Sbjct: 230 FSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMK 289

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PN+GSYQ +LYG+LD+ +F +AK FM QMI +GV PSF+SYK++I+GLC ENL+ 
Sbjct: 290 LKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLVA 349

Query: 541 DVDSVLKRMVQQGFVPK 591
           DV  +LK+MV+QGFVP+
Sbjct: 350 DVVWILKQMVEQGFVPE 366



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 44/160 (27%), Positives = 80/160 (50%)
 Frame = +1

Query: 118 DAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTL 297
           D A   L ++PK    P+V+T++ +++ L    R +   ++Y      G + D    N L
Sbjct: 139 DRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNIL 198

Query: 298 ISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGV 477
           + GLC+ G V    +L D    + C PN  ++  +++GL +S +   A   +++M  +GV
Sbjct: 199 VKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGV 258

Query: 478 FPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
           +P  + + +LI GL     +E+   +L RM  +G  P  G
Sbjct: 259 YPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAG 298


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  267 bits (682), Expect = 2e-69
 Identities = 129/197 (65%), Positives = 159/197 (80%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK+FDV+H+VY GAP+LGVEID CCLNIL+KGLC    +DAA  LLDE PKQ  +PNVRT
Sbjct: 170 AKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRT 229

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +ST+MH LCE GRVE A  L ERMER G  PDT++FN LISGL K+GRV +GM+L  RM 
Sbjct: 230 FSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMK 289

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PN+GSYQ +LYG+LD+ +F +AK FM QMI +GV PSF+SYK++I+GLC ENL+ 
Sbjct: 290 LKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLVA 349

Query: 541 DVDSVLKRMVQQGFVPK 591
           DV  +LK+MV+QGFVP+
Sbjct: 350 DVVWILKQMVEQGFVPE 366



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 44/160 (27%), Positives = 80/160 (50%)
 Frame = +1

Query: 118 DAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTL 297
           D A   L ++PK    P+V+T++ +++ L    R +   ++Y      G + D    N L
Sbjct: 139 DRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNIL 198

Query: 298 ISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGV 477
           + GLC+ G V    +L D    + C PN  ++  +++GL +S +   A   +++M  +GV
Sbjct: 199 VKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGV 258

Query: 478 FPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
           +P  + + +LI GL     +E+   +L RM  +G  P  G
Sbjct: 259 YPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAG 298


>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  263 bits (672), Expect = 3e-68
 Identities = 128/199 (64%), Positives = 158/199 (79%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           A+ FDV+HE+Y  AP LGVEID CCLNILIKGLCE   L+AAF++LDE PKQ  KPNVRT
Sbjct: 116 ARIFDVVHEIYEKAPILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRT 175

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +ST+MH+LC +G V +AF L +RME  G + DTI FN LISGL K+GR+ +GM+L  +M 
Sbjct: 176 FSTLMHYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMK 235

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PN+GSYQ +LYGLLD+ KF EAK FMD+M+ +G  PSF+SYK LI GLC E L+ 
Sbjct: 236 LKGCEPNAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIG 295

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           +VD VLK+M++QGFVPKMG
Sbjct: 296 EVDCVLKQMLKQGFVPKMG 314



 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 38/133 (28%), Positives = 69/133 (51%)
 Frame = +1

Query: 52  GVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEA 231
           G+E+DT   NILI GL +  +++    LL ++  +G +PN  +Y  +++ L + G+  EA
Sbjct: 203 GIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCEPNAGSYQEVLYGLLDAGKFSEA 262

Query: 232 FELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYG 411
            +  +RM   G  P  + +  LI GLCK+  + +   +  +M  +G  P  G ++ I+  
Sbjct: 263 KDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVDCVLKQMLKQGFVPKMGMWKHIVGS 322

Query: 412 LLDSKKFVEAKCF 450
           +L       + CF
Sbjct: 323 MLSESGDCTSICF 335



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
 Frame = +1

Query: 112 KLDAAFHLLDELPK-QGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIF 288
           ++  A   L ++P+     P+V+T++ +++ L      +   E+YE+    G + D    
Sbjct: 82  RIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFDVVHEIYEKAPILGVEIDACCL 141

Query: 289 NTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMIS 468
           N LI GLC+ G +     + D    + C PN  ++  +++ L    +  +A   +D+M +
Sbjct: 142 NILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYLCAKGEVNQAFGLLDRMEN 201

Query: 469 KGVFPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
           +G+    +++ +LI GL     +E+   +L +M  +G  P  G
Sbjct: 202 EGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCEPNAG 244


>ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citrus clementina]
           gi|557544547|gb|ESR55525.1| hypothetical protein
           CICLE_v10020422mg [Citrus clementina]
          Length = 404

 Score =  262 bits (670), Expect = 5e-68
 Identities = 130/199 (65%), Positives = 154/199 (77%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK F  I  +Y  A +LGVEID CCLNIL+KGLCE   L+AAF++LDE PKQ  +PNVRT
Sbjct: 176 AKLFGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           YST+MH LCE+G VEEAF L ERME  G D DT+ FN LISGL KQG+V +GMKL +RM 
Sbjct: 236 YSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
            KGC PNS SYQ +LYGLLD K+F EAK  + +MI + + PSF+SYK LIHGLC++ L+E
Sbjct: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           DVD VLK MVQQGFVP+MG
Sbjct: 356 DVDWVLKTMVQQGFVPRMG 374



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
 Frame = +1

Query: 1   AKQFDVIHEVY--LGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNV 174
           AK+FD I ++   +   +L    D    N++        ++  A   L ++P     P+V
Sbjct: 104 AKRFDAIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSV 163

Query: 175 RTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDR 354
           +T++ +++ L       E   +Y    + G + D    N L+ GLC+ G +     + D 
Sbjct: 164 KTFNLVLNLLVSAKLFGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223

Query: 355 MGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENL 534
              + C PN  +Y  +++GL +     EA   +++M S+G+    +++ +LI GL  +  
Sbjct: 224 FPKQNCEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283

Query: 535 LEDVDSVLKRMVQQGFVP 588
           +E+   +L+RM  +G  P
Sbjct: 284 VEEGMKLLERMKGKGCYP 301


>ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Citrus sinensis]
          Length = 404

 Score =  261 bits (666), Expect = 1e-67
 Identities = 128/199 (64%), Positives = 155/199 (77%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK +  I  +Y  A +LGVEID CCLNIL+KGLCE   L+AAF++LDE PKQ  +PNVRT
Sbjct: 176 AKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRT 235

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +ST+MH LCE+G VEEAF L ERME  G D DT+ FN LISGL KQG+V +GMKL +RM 
Sbjct: 236 FSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMK 295

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
            KGC PNS SYQ +LYGLLD K+F EAK  + +MI + + PSF+SYK LIHGLC++ L+E
Sbjct: 296 GKGCYPNSASYQEVLYGLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVE 355

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           DVD VLK+MVQQGFVP+MG
Sbjct: 356 DVDWVLKKMVQQGFVPRMG 374



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
 Frame = +1

Query: 1   AKQFDVIHEVY--LGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNV 174
           AK FD I ++   +   +L    D    N++        ++  A   L ++P     P+V
Sbjct: 104 AKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSV 163

Query: 175 RTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDR 354
           +T++ +++ L       E   +Y    + G + D    N L+ GLC+ G +     + D 
Sbjct: 164 KTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDE 223

Query: 355 MGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENL 534
              + C PN  ++  +++GL +     EA   +++M S+G+    +++ +LI GL  +  
Sbjct: 224 FPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGK 283

Query: 535 LEDVDSVLKRMVQQGFVP 588
           +E+   +L+RM  +G  P
Sbjct: 284 VEEGMKLLERMKGKGCYP 301


>ref|XP_007022117.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508721745|gb|EOY13642.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 408

 Score =  260 bits (665), Expect = 2e-67
 Identities = 126/198 (63%), Positives = 156/198 (78%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           K FDV+HE+Y   P+LG+EI+ C LNILIKGLCE  KL++AF +LDE PKQG KPNVRT+
Sbjct: 184 KLFDVVHEIYGKGPKLGIEIEACTLNILIKGLCENGKLESAFQVLDEFPKQGCKPNVRTF 243

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           ST+MH LCE+G+V+EAFEL  RME  G + D + FN LISGL KQGRV +G+KL ++M  
Sbjct: 244 STLMHGLCEKGKVDEAFELMGRMETEGIEADAVSFNILISGLRKQGRVEEGVKLLEKMKR 303

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           KGC PN+GSYQ +LYGLLD+++F+EAK  M +MI + V PSF SYK LIHG C E L+ +
Sbjct: 304 KGCYPNAGSYQEVLYGLLDAERFMEAKELMGRMILERVSPSFDSYKKLIHGFCKEKLVRE 363

Query: 544 VDSVLKRMVQQGFVPKMG 597
           VD  LK+MVQQGFVPKMG
Sbjct: 364 VDWALKQMVQQGFVPKMG 381



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 43/162 (26%), Positives = 84/162 (51%)
 Frame = +1

Query: 112 KLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFN 291
           ++  A   L  +P  G  P+V+T++ I+  L      +   E+Y +  + G + +    N
Sbjct: 150 RIKRAIETLFSMPDYGTWPSVKTFNIILSLLVANKLFDVVHEIYGKGPKLGIEIEACTLN 209

Query: 292 TLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISK 471
            LI GLC+ G++    ++ D    +GC PN  ++  +++GL +  K  EA   M +M ++
Sbjct: 210 ILIKGLCENGKLESAFQVLDEFPKQGCKPNVRTFSTLMHGLCEKGKVDEAFELMGRMETE 269

Query: 472 GVFPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
           G+    +S+ +LI GL  +  +E+   +L++M ++G  P  G
Sbjct: 270 GIEADAVSFNILISGLRKQGRVEEGVKLLEKMKRKGCYPNAG 311


>ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Solanum lycopersicum]
          Length = 387

 Score =  259 bits (663), Expect = 3e-67
 Identities = 121/198 (61%), Positives = 154/198 (77%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           KQFDV+H+VY+   +LGVEID CCLNI+IKGLC C ++DAA+ + DE PKQ   PNVRT+
Sbjct: 163 KQFDVVHKVYVRGSELGVEIDACCLNIIIKGLCRCGEIDAAYKVFDEFPKQNCSPNVRTF 222

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           STIMH LC+ GRV+EA  L +RME    +PD I+FNTLISGL KQ RV +G+ +F ++ L
Sbjct: 223 STIMHALCDHGRVDEALSLLDRMENENVEPDAIVFNTLISGLRKQRRVDEGIDMFKKVML 282

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           KGC PN G+YQ +LY LLD+K+F+EAK FM  MI K V PSF SYK+++HGLCD  L+ D
Sbjct: 283 KGCDPNPGTYQEVLYALLDAKRFLEAKNFMSVMIDKRVNPSFESYKVIVHGLCDGKLVGD 342

Query: 544 VDSVLKRMVQQGFVPKMG 597
           +D VLK+MV+ GFVP+MG
Sbjct: 343 LDWVLKQMVRHGFVPRMG 360



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 39/162 (24%), Positives = 82/162 (50%)
 Frame = +1

Query: 112 KLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFN 291
           +++ +   L ++P     P+V+T++ +++ L    + +   ++Y R    G + D    N
Sbjct: 129 RINRSIDTLFDMPNYKCFPSVKTFNFVLNLLVNTKQFDVVHKVYVRGSELGVEIDACCLN 188

Query: 292 TLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISK 471
            +I GLC+ G +    K+FD    + C PN  ++  I++ L D  +  EA   +D+M ++
Sbjct: 189 IIIKGLCRCGEIDAAYKVFDEFPKQNCSPNVRTFSTIMHALCDHGRVDEALSLLDRMENE 248

Query: 472 GVFPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
            V P  + +  LI GL  +  +++   + K+++ +G  P  G
Sbjct: 249 NVEPDAIVFNTLISGLRKQRRVDEGIDMFKKVMLKGCDPNPG 290


>ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Solanum tuberosum]
          Length = 387

 Score =  255 bits (652), Expect = 6e-66
 Identities = 120/198 (60%), Positives = 153/198 (77%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           KQFDV+H+VYL   +LGVEID CCLNI+IKGLC C ++ AA+ + DE PKQ   PNVRT+
Sbjct: 163 KQFDVVHKVYLRGSELGVEIDACCLNIIIKGLCRCGEIAAAYKVFDEFPKQNCSPNVRTF 222

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           STIMH LC+ GRV+EA  L ERME    +PD I+FNTLISGL KQ RV +G+ +F ++ L
Sbjct: 223 STIMHALCDHGRVDEALSLLERMENEDVEPDAIVFNTLISGLRKQRRVDEGIDMFKKVML 282

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           KGC PN G+YQ +LY LLD+K+++EAK FM  MI K V PSF SYK+++HGLCD  L+ D
Sbjct: 283 KGCDPNPGTYQEVLYALLDAKRYLEAKDFMAVMIDKRVNPSFESYKVIVHGLCDGKLVGD 342

Query: 544 VDSVLKRMVQQGFVPKMG 597
           +D VLK+M++ GFVP+MG
Sbjct: 343 LDWVLKQMMRHGFVPRMG 360



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 39/162 (24%), Positives = 82/162 (50%)
 Frame = +1

Query: 112 KLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFN 291
           +++ A     ++P     P+V+T++ +++ L    + +   ++Y R    G + D    N
Sbjct: 129 RINRAIDTFFDMPNYKCFPSVKTFNFLLNLLVNTKQFDVVHKVYLRGSELGVEIDACCLN 188

Query: 292 TLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISK 471
            +I GLC+ G +A   K+FD    + C PN  ++  I++ L D  +  EA   +++M ++
Sbjct: 189 IIIKGLCRCGEIAAAYKVFDEFPKQNCSPNVRTFSTIMHALCDHGRVDEALSLLERMENE 248

Query: 472 GVFPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
            V P  + +  LI GL  +  +++   + K+++ +G  P  G
Sbjct: 249 DVEPDAIVFNTLISGLRKQRRVDEGIDMFKKVMLKGCDPNPG 290


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score =  255 bits (651), Expect = 8e-66
 Identities = 121/199 (60%), Positives = 155/199 (77%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK FDV+HEVY+GAP+LG+EID CCLNIL+KGLC+   LDAA  +LDE P+Q  +PNVRT
Sbjct: 176 AKMFDVVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRT 235

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +ST++H LCE G +  A EL+ +ME  G  PDTI FN LISGL K+ R+ + ++L  RM 
Sbjct: 236 FSTLLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMK 295

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PN+G+YQ +LYGLLD+ KF+EA+  M +MIS+G+ PSF+SYK L+ GLC + L E
Sbjct: 296 LKGCYPNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTE 355

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           DVD VLK+MV QGFVPK+G
Sbjct: 356 DVDWVLKQMVMQGFVPKVG 374



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 42/162 (25%), Positives = 82/162 (50%)
 Frame = +1

Query: 112 KLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFN 291
           +L+ A   L ++P     P+V+T++ +++ L      +   E+Y    + G + D    N
Sbjct: 143 RLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLN 202

Query: 292 TLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISK 471
            L+ GLC+ G +   +K+ D    + C PN  ++  +L+GL ++ +   A     +M ++
Sbjct: 203 ILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGELGRALELFCKMENE 262

Query: 472 GVFPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
           GV P  +++ +LI GL  +  +E+   +L RM  +G  P  G
Sbjct: 263 GVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAG 304


>gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis]
          Length = 405

 Score =  253 bits (646), Expect = 3e-65
 Identities = 118/198 (59%), Positives = 153/198 (77%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           A+ FDV+HE+++ AP+LGV ID CCLNI+IKGLCEC KL+ A  +LDE P+QG +PN+ T
Sbjct: 179 ARLFDVVHELFVAAPKLGVVIDACCLNIMIKGLCECRKLEVALQMLDEFPRQGCEPNLLT 238

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           ++T+MH+LC  G+VEEA +L+ERME  G +PDTI FN LI+GL +QGRV +GM L  RM 
Sbjct: 239 FTTLMHYLCVHGKVEEAIKLFERMEEEGIEPDTITFNVLIAGLRRQGRVDEGMVLLQRMK 298

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PN GSYQ +  GLLD+++F EA   M ++IS G  PS  S+K LIHGLC+EN +E
Sbjct: 299 LKGCNPNVGSYQEVFNGLLDAERFSEANEVMSRIISMGSSPSIKSFKCLIHGLCEENRME 358

Query: 541 DVDSVLKRMVQQGFVPKM 594
           D+D  LK+M +QGFVPKM
Sbjct: 359 DIDWALKQMGKQGFVPKM 376


>gb|EMT16192.1| hypothetical protein F775_07734 [Aegilops tauschii]
          Length = 364

 Score =  249 bits (635), Expect = 5e-64
 Identities = 116/198 (58%), Positives = 149/198 (75%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           +Q++V+HEVY  AP+LGVE+DTCC NILIKGLC+  + + A  LLDE+PKQ  +PNV TY
Sbjct: 156 RQYEVVHEVYASAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQECRPNVTTY 215

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           ST+MHFLC + RV+EAF+L+ERM +   D DT+++N L+SGLC+QGRV     LF  M  
Sbjct: 216 STLMHFLCRKSRVDEAFKLFERMRKEEIDADTVVYNILVSGLCRQGRVTSAYDLFKSMSS 275

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           +GC PNSG+YQ +L GL+ SKKFVEAK  +  M ++ + PSF SYKLLI GLC  N L+D
Sbjct: 276 EGCHPNSGTYQVLLDGLVASKKFVEAKDLVTMMSAESLRPSFSSYKLLIDGLCSVNCLDD 335

Query: 544 VDSVLKRMVQQGFVPKMG 597
              VLK+MV QGFVP+MG
Sbjct: 336 AHHVLKQMVDQGFVPRMG 353



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 45/160 (28%), Positives = 77/160 (48%)
 Frame = +1

Query: 118 DAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTL 297
           + A   L  +P  G  P+ +T++ ++H L  + + E   E+Y    R G + DT  FN L
Sbjct: 124 EKAMETLYAMPDYGCWPSTKTFNYVLHMLVCKRQYEVVHEVYASAPRLGVELDTCCFNIL 183

Query: 298 ISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGV 477
           I GLC+ GR  + + L D M  + C PN  +Y  +++ L    +  EA    ++M  + +
Sbjct: 184 IKGLCQFGRFNEALSLLDEMPKQECRPNVTTYSTLMHFLCRKSRVDEAFKLFERMRKEEI 243

Query: 478 FPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
               + Y +L+ GLC +  +     + K M  +G  P  G
Sbjct: 244 DADTVVYNILVSGLCRQGRVTSAYDLFKSMSSEGCHPNSG 283



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/121 (28%), Positives = 55/121 (45%)
 Frame = +1

Query: 55  VEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAF 234
           ++ DT   NIL+ GLC   ++ +A+ L   +  +G  PN  TY  ++  L    +  EA 
Sbjct: 243 IDADTVVYNILVSGLCRQGRVTSAYDLFKSMSSEGCHPNSGTYQVLLDGLVASKKFVEAK 302

Query: 235 ELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGL 414
           +L   M      P    +  LI GLC    + D   +  +M  +G  P  G++  +L  L
Sbjct: 303 DLVTMMSAESLRPSFSSYKLLIDGLCSVNCLDDAHHVLKQMVDQGFVPRMGTWTKLLTSL 362

Query: 415 L 417
           L
Sbjct: 363 L 363


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score =  240 bits (613), Expect = 2e-61
 Identities = 117/199 (58%), Positives = 149/199 (74%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK FD IH++++ AP+LGVEID CCLNILIKGLCE   L+AA  LLDE PKQ  +PNV T
Sbjct: 180 AKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMT 239

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +S ++   C +G+ EEAF+L ERME+   +PDTI FN LISGL K+GRV +G+ L +RM 
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PN G+YQ +LYGLLD K+ +EAK  M QMIS G+ PSFLSYK ++ GLC+   + 
Sbjct: 300 LKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVA 359

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           ++D VL++MV  GFVPK G
Sbjct: 360 EMDWVLRKMVNHGFVPKTG 378



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 33/113 (29%), Positives = 59/113 (52%)
 Frame = +1

Query: 55  VEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAF 234
           +E DT   NILI GL +  +++    LL+ +  +G +PN  TY  +++ L ++ R  EA 
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLEAK 327

Query: 235 ELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSY 393
           E+  +M   G  P  + +  ++ GLC+   VA+   +  +M   G  P +G +
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVAEMDWVLRKMVNHGFVPKTGMW 380


>dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 363

 Score =  240 bits (612), Expect = 3e-61
 Identities = 112/197 (56%), Positives = 144/197 (73%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           +Q++V+HEVY  AP+LGVE+DTCC NILIKGLC+  + + A  LLDE+PKQ  +PN  TY
Sbjct: 156 RQYEVVHEVYSSAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTY 215

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           ST+MHFLC   RV+EAFEL+ERM +   D DT+++N L+SGLC++GRV     LF  M  
Sbjct: 216 STLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSS 275

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           +GC PNSG+YQ +L GL+ SK FVEAK  +  M ++ + PSF SYKLLI G C  N L+D
Sbjct: 276 QGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAESLRPSFSSYKLLIDGFCSVNCLDD 335

Query: 544 VDSVLKRMVQQGFVPKM 594
              VLK+MV QGFVP+M
Sbjct: 336 AHHVLKQMVDQGFVPRM 352



 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 47/160 (29%), Positives = 79/160 (49%)
 Frame = +1

Query: 118 DAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTL 297
           + A   L  + + G  P+ +T++ ++H L  R + E   E+Y    R G + DT  FN L
Sbjct: 124 EKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNIL 183

Query: 298 ISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGV 477
           I GLC+ GR  + + L D M  + C PN+ +Y  +++ L  + +  EA    ++M  + +
Sbjct: 184 IKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEI 243

Query: 478 FPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
               + Y +L+ GLC E  +     + K M  QG  P  G
Sbjct: 244 DADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSG 283


>ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Capsella rubella]
           gi|482567992|gb|EOA32181.1| hypothetical protein
           CARUB_v10015437mg [Capsella rubella]
          Length = 408

 Score =  239 bits (611), Expect = 3e-61
 Identities = 116/199 (58%), Positives = 149/199 (74%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK FD IH++++ AP+LGVEID CC+NILIKGLCE   L+AA  LLDE PKQ  +PNV T
Sbjct: 180 AKLFDEIHKIFVSAPKLGVEIDACCMNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMT 239

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +S ++   C +G+  EAFEL ERME+   +PDTI FN LISGL K+GRV +G++L +RM 
Sbjct: 240 FSPLIRGFCNKGKFAEAFELLERMEKERIEPDTITFNILISGLRKKGRVEEGIQLLERMK 299

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           LKGC PN G+YQ +LYGLLD K+ +EAK  M QMIS G+ PSFLSYK ++ GLC+   + 
Sbjct: 300 LKGCQPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVA 359

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           ++D VL++MV  GFVPK G
Sbjct: 360 ELDWVLRQMVNHGFVPKTG 378



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/113 (29%), Positives = 59/113 (52%)
 Frame = +1

Query: 55  VEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAF 234
           +E DT   NILI GL +  +++    LL+ +  +G +PN  TY  +++ L ++ R  EA 
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIQLLERMKLKGCQPNPGTYQEVLYGLLDKKRNLEAK 327

Query: 235 ELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSY 393
           E+  +M   G  P  + +  ++ GLC+   VA+   +  +M   G  P +G +
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVAELDWVLRQMVNHGFVPKTGMW 380


>ref|XP_004301959.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 399

 Score =  239 bits (611), Expect = 3e-61
 Identities = 115/198 (58%), Positives = 150/198 (75%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           K FDV+HEVYL + +LGVE+D C LNI++KGLCE  K+D A  +LDE P Q  +PN  T+
Sbjct: 171 KMFDVVHEVYLMSAKLGVEVDACSLNIIVKGLCESGKVDGALQVLDEFPHQKCEPNALTF 230

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           ST+MH LC  G+V+EAF L  RME  G DPD++ FN LI+GL +Q R  +G++L ++M L
Sbjct: 231 STLMHGLCVIGKVDEAFGLLRRMENEGIDPDSVTFNILIAGLRRQKRYDEGIELLEQMKL 290

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           KGC PN  SYQ +LY LLD+++FVEAK FM +M+SK V PSF+SYK LI GLC EN +E+
Sbjct: 291 KGCAPNPASYQEVLYCLLDAQRFVEAKEFMIRMVSKRVGPSFVSYKQLIQGLCKENKVEE 350

Query: 544 VDSVLKRMVQQGFVPKMG 597
           +D VL++M +QGFVPKMG
Sbjct: 351 LDWVLRQMTRQGFVPKMG 368



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 39/159 (24%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
 Frame = +1

Query: 115 LDAAFHLLDELPKQ-GLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFN 291
           ++ A   L ++P   G  P+V+T++ ++H L      +   E+Y    + G + D    N
Sbjct: 137 INKAMQTLFDMPGGFGCWPSVKTFNLVLHILVSTKMFDVVHEVYLMSAKLGVEVDACSLN 196

Query: 292 TLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISK 471
            ++ GLC+ G+V   +++ D    + C PN+ ++  +++GL    K  EA   + +M ++
Sbjct: 197 IIVKGLCESGKVDGALQVLDEFPHQKCEPNALTFSTLMHGLCVIGKVDEAFGLLRRMENE 256

Query: 472 GVFPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVP 588
           G+ P  +++ +LI GL  +   ++   +L++M  +G  P
Sbjct: 257 GIDPDSVTFNILIAGLRRQKRYDEGIELLEQMKLKGCAP 295


>ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutrema salsugineum]
           gi|557108212|gb|ESQ48519.1| hypothetical protein
           EUTSA_v10020856mg [Eutrema salsugineum]
          Length = 404

 Score =  239 bits (610), Expect = 4e-61
 Identities = 115/199 (57%), Positives = 151/199 (75%)
 Frame = +1

Query: 1   AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRT 180
           AK FD IH++++ AP+LGVEID CCLNILIKGLCE   L+AA  +LDE PKQ  +PNV T
Sbjct: 175 AKLFDEIHKIFVSAPRLGVEIDGCCLNILIKGLCESGNLEAALQVLDEFPKQKSRPNVMT 234

Query: 181 YSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMG 360
           +S ++   C +G+ EEAF+L ERME+   +PDTI FN LISGL K+GRV +G++L +RM 
Sbjct: 235 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIELLERMR 294

Query: 361 LKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLE 540
           +KGC PN G+YQ +LYGLLD K+ +EAK  M QMIS G+ PSF+SYK ++ GLC+   +E
Sbjct: 295 VKGCQPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFVSYKKMVLGLCETKSVE 354

Query: 541 DVDSVLKRMVQQGFVPKMG 597
           ++D VL++MV  GFVPK G
Sbjct: 355 EMDWVLRQMVNHGFVPKTG 373



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 36/137 (26%), Positives = 72/137 (52%)
 Frame = +1

Query: 55  VEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAF 234
           +E DT   NILI GL +  +++    LL+ +  +G +PN  TY  +++ L ++ R  EA 
Sbjct: 263 IEPDTITFNILISGLRKKGRVEEGIELLERMRVKGCQPNPGTYQEVLYGLLDKKRNLEAK 322

Query: 235 ELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGL 414
           E+  +M   G  P  + +  ++ GLC+   V +   +  +M   G  P +G +  +L  +
Sbjct: 323 EMMSQMISWGMRPSFVSYKKMVLGLCETKSVEEMDWVLRQMVNHGFVPKTGMWWKVLRCV 382

Query: 415 LDSKKFVEAKCFMDQMI 465
           +   + +++K  +D++I
Sbjct: 383 V--MRNIDSKADLDRII 397


>ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
           gi|241938290|gb|EES11435.1| hypothetical protein
           SORBIDRAFT_06g028710 [Sorghum bicolor]
          Length = 363

 Score =  239 bits (610), Expect = 4e-61
 Identities = 111/198 (56%), Positives = 146/198 (73%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           +Q++V+HE+Y  AP+LGV +DTC  NIL+KGLC+C K D A  LL E+PKQG +PNV TY
Sbjct: 156 RQYEVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAISLLHEMPKQGCQPNVATY 215

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           ST MHFLC+R  V++AFEL+ERM +     DT+++N LISGLC++ RV++   LF  M  
Sbjct: 216 STFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGLCREERVSEAFDLFKSMTS 275

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           +GC PNSG+YQ +L GL+   KF EAK  +  M ++GV PSF SYKLLI GLC E+ ++D
Sbjct: 276 EGCYPNSGTYQVLLDGLISLGKFFEAKSLVSTMSTEGVRPSFQSYKLLIDGLCSEDCVDD 335

Query: 544 VDSVLKRMVQQGFVPKMG 597
              VLK+MV QGFVP+MG
Sbjct: 336 AHLVLKQMVGQGFVPRMG 353



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 42/158 (26%), Positives = 72/158 (45%)
 Frame = +1

Query: 124 AFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLIS 303
           A   L  +P     P+ +T++ ++H L  + + E   E+Y    R G   DT  FN L+ 
Sbjct: 126 AIDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVK 185

Query: 304 GLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFP 483
           GLC+  +  + + L   M  +GC PN  +Y   ++ L       +A    ++M  + +  
Sbjct: 186 GLCQCSKFDEAISLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAA 245

Query: 484 SFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
             + Y +LI GLC E  + +   + K M  +G  P  G
Sbjct: 246 DTVVYNILISGLCREERVSEAFDLFKSMTSEGCYPNSG 283



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 39/131 (29%), Positives = 59/131 (45%)
 Frame = +1

Query: 13  DVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTI 192
           D   E++    +  +  DT   NILI GLC  +++  AF L   +  +G  PN  TY  +
Sbjct: 229 DKAFELFERMRKQDIAADTVVYNILISGLCREERVSEAFDLFKSMTSEGCYPNSGTYQVL 288

Query: 193 MHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGC 372
           +  L   G+  EA  L   M   G  P    +  LI GLC +  V D   +  +M  +G 
Sbjct: 289 LDGLISLGKFFEAKSLVSTMSTEGVRPSFQSYKLLIDGLCSEDCVDDAHLVLKQMVGQGF 348

Query: 373 CPNSGSYQAIL 405
            P  G++  +L
Sbjct: 349 VPRMGTWTKLL 359


>ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Brachypodium distachyon]
          Length = 392

 Score =  236 bits (601), Expect = 5e-60
 Identities = 112/198 (56%), Positives = 143/198 (72%)
 Frame = +1

Query: 4   KQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTY 183
           +Q++VIHEVY  AP LGV +DTCC NILIKGLC+  K D A  LL E+PKQ   PNV TY
Sbjct: 156 RQYEVIHEVYESAPWLGVTLDTCCFNILIKGLCQFGKFDEAISLLHEMPKQECLPNVVTY 215

Query: 184 STIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGL 363
           ST+MHFLC+ GRV++AFEL+ERM +   D DT+++N LISGLC++G+V     +F  M  
Sbjct: 216 STLMHFLCQHGRVDKAFELFERMRKEEIDADTVVYNILISGLCREGKVTIAFDMFKSMSS 275

Query: 364 KGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGVFPSFLSYKLLIHGLCDENLLED 543
           +GC PNSG+YQ +L  LL S+ F EAK  +  M ++G+ PSF SYKLLI GLC  N LED
Sbjct: 276 EGCYPNSGTYQVLLDSLLTSRNFTEAKDLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLED 335

Query: 544 VDSVLKRMVQQGFVPKMG 597
              + K+MV QGF+P+MG
Sbjct: 336 GHLIFKQMVDQGFIPRMG 353



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 43/160 (26%), Positives = 75/160 (46%)
 Frame = +1

Query: 118 DAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAFELYERMERAGCDPDTIIFNTL 297
           + A  +L  +P     P+ +T++ ++H L  + + E   E+YE     G   DT  FN L
Sbjct: 124 ERAMEMLYAMPGYNCWPSTKTFNYVLHMLVCKRQYEVIHEVYESAPWLGVTLDTCCFNIL 183

Query: 298 ISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGLLDSKKFVEAKCFMDQMISKGV 477
           I GLC+ G+  + + L   M  + C PN  +Y  +++ L    +  +A    ++M  + +
Sbjct: 184 IKGLCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMRKEEI 243

Query: 478 FPSFLSYKLLIHGLCDENLLEDVDSVLKRMVQQGFVPKMG 597
               + Y +LI GLC E  +     + K M  +G  P  G
Sbjct: 244 DADTVVYNILISGLCREGKVTIAFDMFKSMSSEGCYPNSG 283



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 42/137 (30%), Positives = 60/137 (43%)
 Frame = +1

Query: 55  VEIDTCCLNILIKGLCECDKLDAAFHLLDELPKQGLKPNVRTYSTIMHFLCERGRVEEAF 234
           ++ DT   NILI GLC   K+  AF +   +  +G  PN  TY  ++  L       EA 
Sbjct: 243 IDADTVVYNILISGLCREGKVTIAFDMFKSMSSEGCYPNSGTYQVLLDSLLTSRNFTEAK 302

Query: 235 ELYERMERAGCDPDTIIFNTLISGLCKQGRVADGMKLFDRMGLKGCCPNSGSYQAILYGL 414
           +L   M   G  P    +  LI GLC    + DG  +F +M  +G  P  G++      L
Sbjct: 303 DLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLEDGHLIFKQMVDQGFIPRMGTWTK----L 358

Query: 415 LDSKKFVEAKCFMDQMI 465
           L S        F+D +I
Sbjct: 359 LTSMSLTYTGDFLDNLI 375