BLASTX nr result
ID: Cocculus23_contig00006984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00006984
(395 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis] 75 9e-12
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutr... 73 4e-11
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar... 71 2e-10
ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Caps... 70 2e-10
ref|XP_007041384.1| Tetratricopeptide repeat (TPR)-like superfam... 70 4e-10
ref|XP_007131879.1| hypothetical protein PHAVU_011G049000g [Phas... 69 7e-10
ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_007199804.1| hypothetical protein PRUPE_ppa004794mg [Prun... 69 9e-10
ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citr... 67 2e-09
gb|EPS61672.1| hypothetical protein M569_13122 [Genlisea aurea] 67 3e-09
ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [A... 65 1e-08
emb|CBI32533.3| unnamed protein product [Vitis vinifera] 61 2e-07
gb|EYU42638.1| hypothetical protein MIMGU_mgv1a023952mg [Mimulus... 60 4e-07
>gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis]
Length = 476
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = -2
Query: 208 ALVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRT 29
+++S VV+ L +RSKSRW ++ L P G E SQI L L+N+PHLALRFFLW++R
Sbjct: 37 SMISTVVAVLTHQRSKSRWAHLRSL-RPNGFAPSEFSQIALHLKNNPHLALRFFLWTHRN 95
Query: 28 SLCTH 14
SLC H
Sbjct: 96 SLCDH 100
>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = -2
Query: 205 LVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRTS 26
L+S VS LR +RSKSRW+ ++ L P G T E SQI L+++N+PHLAL FFLW + S
Sbjct: 36 LISTAVSILRHQRSKSRWSHLQSLFPK-GFTPTEASQIVLQIKNNPHLALSFFLWCHHKS 94
Query: 25 LCTH 14
LC H
Sbjct: 95 LCNH 98
>ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like isoform X1 [Solanum tuberosum]
gi|565365876|ref|XP_006349624.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X2 [Solanum tuberosum]
Length = 493
Score = 73.2 bits (178), Expect = 4e-11
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = -2
Query: 238 THATMYTRGNALVSAVVSTLRQKRSKSRWNDIKMLCPPT-GLTSDEVSQITLELRNSPHL 62
T + + LVSA + L+ RSKSRW++I L PPT G T +VS+I L+LRN+PHL
Sbjct: 29 TSSPPQSEDETLVSAATTILKHHRSKSRWSEILSLAPPTSGFTPSQVSKIILQLRNTPHL 88
Query: 61 ALRFFLWSNRTSLCTH 14
ALRFF ++ S+C H
Sbjct: 89 ALRFFNFTVHRSICCH 104
>ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutrema salsugineum]
gi|557110641|gb|ESQ50932.1| hypothetical protein
EUTSA_v10022658mg [Eutrema salsugineum]
Length = 495
Score = 73.2 bits (178), Expect = 4e-11
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = -2
Query: 220 TRGNALVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLW 41
T + L+S VS L RSKSRW+ ++ L P+G T + S+ITL LRN+PHL+LRFFL+
Sbjct: 43 TPSDPLISDAVSILTHHRSKSRWSTLRSL-NPSGFTPSQFSEITLRLRNNPHLSLRFFLF 101
Query: 40 SNRTSLCTHGHG 5
+ R SLC H G
Sbjct: 102 TRRHSLCPHDIG 113
>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = -2
Query: 202 VSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRTSL 23
+S VVS L +RSKSRW + LCP G E S I L+++N+PHLALRFFLW+ SL
Sbjct: 43 ISTVVSVLTHQRSKSRWRFLNSLCP-NGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSL 101
Query: 22 CTH 14
C H
Sbjct: 102 CNH 104
>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
gi|449472579|ref|XP_004153637.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = -2
Query: 202 VSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRTSL 23
+S VVS L +RSKSRW + LCP G E S I L+++N+PHLALRFFLW+ SL
Sbjct: 43 ISTVVSVLTHQRSKSRWRFLNSLCP-NGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSL 101
Query: 22 CTH 14
C H
Sbjct: 102 CNH 104
>ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Solanum lycopersicum]
Length = 495
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -2
Query: 205 LVSAVVSTLRQKRSKSRWNDIKMLCPPT-GLTSDEVSQITLELRNSPHLALRFFLWSNRT 29
LVSA + L+ RSKSRW++I L PPT G T +VS+I L+LRN+PHLALRFF ++
Sbjct: 42 LVSAATTILKHHRSKSRWSEILSLAPPTSGFTPSQVSKIILQLRNTPHLALRFFNFTVHR 101
Query: 28 SLCTH 14
S+C H
Sbjct: 102 SICCH 106
>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Glycine max]
Length = 487
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = -2
Query: 208 ALVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRT 29
+LV+ VS L RSKSRW++++ CP G+T E S+ITL ++N P LALRFFLW+
Sbjct: 33 SLVTDAVSILTHHRSKSRWSNLRSACP-NGITPAEFSEITLHIKNKPQLALRFFLWTKSK 91
Query: 28 SLCTH 14
SLC H
Sbjct: 92 SLCNH 96
>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
[Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 498
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = -2
Query: 205 LVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRTS 26
L+S VS L RSKSRW+ ++ L P+G T + S+ITL LRN+PHL+LRFFL++ R S
Sbjct: 41 LISDAVSILTHHRSKSRWSTLRSL-QPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYS 99
Query: 25 LCTH 14
LC+H
Sbjct: 100 LCSH 103
>ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Capsella rubella]
gi|482567718|gb|EOA31907.1| hypothetical protein
CARUB_v10015136mg [Capsella rubella]
Length = 492
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -2
Query: 205 LVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRTS 26
L+S VS L RSKSRW+ ++ L P G T + S+ITL LRN+PHL+LRFFL++ R S
Sbjct: 35 LISDAVSILTHHRSKSRWSTLRSL-HPYGFTPFQFSEITLRLRNNPHLSLRFFLFTRRFS 93
Query: 25 LCTHGHG 5
LC+H G
Sbjct: 94 LCSHDVG 100
>ref|XP_007041384.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao]
gi|590682590|ref|XP_007041385.1| Tetratricopeptide
repeat (TPR)-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|590682593|ref|XP_007041386.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508705319|gb|EOX97215.1| Tetratricopeptide repeat
(TPR)-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508705320|gb|EOX97216.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508705321|gb|EOX97217.1| Tetratricopeptide repeat
(TPR)-like superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 490
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = -2
Query: 202 VSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRTSL 23
++ V S L RSKSRW+ I L P +G T + SQITL+L+N+PHLALRFFL++ + SL
Sbjct: 41 IATVTSILTHHRSKSRWSTILTLFP-SGFTPSQFSQITLQLKNNPHLALRFFLFTEQKSL 99
Query: 22 CTH 14
C H
Sbjct: 100 CNH 102
>ref|XP_007131879.1| hypothetical protein PHAVU_011G049000g [Phaseolus vulgaris]
gi|561004879|gb|ESW03873.1| hypothetical protein
PHAVU_011G049000g [Phaseolus vulgaris]
Length = 439
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = -2
Query: 208 ALVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRT 29
+ V+ VV+ L RSKSRW++++ CP G+ E SQITL L+N P LALRFFLW+
Sbjct: 33 SFVTNVVTILINHRSKSRWSNLRSACP-NGIDPLEFSQITLHLKNKPQLALRFFLWTKSK 91
Query: 28 SLCTH 14
SLC H
Sbjct: 92 SLCHH 96
>ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Fragaria vesca subsp. vesca]
Length = 493
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = -2
Query: 211 NALVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLW--S 38
N L+ +VVS L Q RSKSRW ++ L P +G T ++ SQI+L+++N+PHL LRFF W +
Sbjct: 42 NPLIPSVVSILTQLRSKSRWGYLRTLYP-SGFTPNDFSQISLQIKNNPHLVLRFFQWTQN 100
Query: 37 NRTSLCTH 14
SLC H
Sbjct: 101 KNNSLCAH 108
>ref|XP_007199804.1| hypothetical protein PRUPE_ppa004794mg [Prunus persica]
gi|462395204|gb|EMJ01003.1| hypothetical protein
PRUPE_ppa004794mg [Prunus persica]
Length = 491
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -2
Query: 211 NALVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNR 32
N L+S VVS + RSK+RW+ ++ L P G S++ SQI L ++N+P LALRFFLW+
Sbjct: 38 NPLISDVVSIITNLRSKTRWSYLRSLYPH-GFDSNDFSQIALHIKNNPRLALRFFLWTQH 96
Query: 31 TSLCTH 14
SLC H
Sbjct: 97 KSLCNH 102
>ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citrus clementina]
gi|567861000|ref|XP_006423154.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|567861002|ref|XP_006423155.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|568851351|ref|XP_006479357.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X1 [Citrus sinensis]
gi|568851353|ref|XP_006479358.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X2 [Citrus sinensis]
gi|557525087|gb|ESR36393.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|557525088|gb|ESR36394.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|557525089|gb|ESR36395.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
Length = 494
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = -2
Query: 205 LVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNRTS 26
L++ VVS L RSKSRWN + LC +GLT + SQI L L+N+PHLAL FF ++ S
Sbjct: 41 LIATVVSLLTHHRSKSRWNHLLSLCR-SGLTPTQFSQIALGLKNNPHLALHFFSFTQHKS 99
Query: 25 LCTH 14
LC H
Sbjct: 100 LCKH 103
>gb|EPS61672.1| hypothetical protein M569_13122 [Genlisea aurea]
Length = 464
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -2
Query: 238 THATMYTRGNALVSAVVSTLRQKRSKSRWNDIK-MLCPPTGLTSDEVSQITLELRNSPHL 62
T Y+ G +LVSA VS L+ RSKSRW++++ +L P LT SQ+ L +RN+P L
Sbjct: 7 TRTIAYSSGESLVSAAVSVLQHHRSKSRWSNLRSLLSGPANLTPSHFSQVALRIRNNPRL 66
Query: 61 ALRFFLWSNRTSLCTH 14
L FF ++ R SL +H
Sbjct: 67 VLAFFHFTLRYSLSSH 82
>ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [Amborella trichopoda]
gi|548860027|gb|ERN17635.1| hypothetical protein
AMTR_s00059p00176060 [Amborella trichopoda]
Length = 511
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/68 (45%), Positives = 42/68 (61%)
Frame = -2
Query: 211 NALVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFLWSNR 32
N L+ + + L++ RSKSRWN +K CP G +VSQI + LRN PHLAL FF WS +
Sbjct: 56 NELIFSATTILKEHRSKSRWNYLKASCPQ-GFNPQQVSQIIINLRNKPHLALAFFYWSAK 114
Query: 31 TSLCTHGH 8
++ H
Sbjct: 115 QKQNSYKH 122
>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -2
Query: 205 LVSAVVSTLRQKRSKSRWNDIKMLCPPTGLTSDEVSQITLELRNSPHLALRFFL 44
L+S VS LR +RSKSRW+ ++ L P G T E SQI L+++N+PHLAL FFL
Sbjct: 36 LISTAVSILRHQRSKSRWSHLQSLFPK-GFTPTEASQIVLQIKNNPHLALSFFL 88
>gb|EYU42638.1| hypothetical protein MIMGU_mgv1a023952mg [Mimulus guttatus]
Length = 415
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = -2
Query: 220 TRGNALVSAVVSTLRQKRSKSRWNDIKMLCPP---TGLTSDEVSQITLELRNSPHLALRF 50
T G + SA VS L+ RSKSRW+ ++ L LT+D+ SQI L+LRNSP L +RF
Sbjct: 12 TSGVDVASAAVSILKHHRSKSRWSHLRSLIAAGEDNRLTADQFSQIALQLRNSPQLVIRF 71
Query: 49 FLWSNRTSLCTH 14
F ++ SL +H
Sbjct: 72 FHFTLHHSLSSH 83