BLASTX nr result
ID: Cocculus23_contig00006964
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00006964
(1081 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007099662.1| Gag protease polyprotein-like protein [Theob... 126 1e-26
ref|XP_007028010.1| Gag protease polyprotein [Theobroma cacao] g... 126 1e-26
ref|XP_007023594.1| Gag protease polyprotein [Theobroma cacao] g... 125 3e-26
prf||1510387A retrotransposon del1-46 125 3e-26
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy... 124 7e-26
ref|XP_007049818.1| Gag protease polyprotein [Theobroma cacao] g... 120 1e-24
ref|XP_007014287.1| Gag protease polyprotein [Theobroma cacao] g... 119 2e-24
emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group] 119 2e-24
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera] 119 3e-24
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo] 118 4e-24
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo] 118 4e-24
ref|XP_006833015.1| hypothetical protein AMTR_s00876p00007370, p... 118 5e-24
ref|XP_007027895.1| Gag protease polyprotein [Theobroma cacao] g... 118 5e-24
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi... 117 6e-24
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g... 117 6e-24
emb|CAE04228.1| OSJNBa0011F23.1 [Oryza sativa Japonica Group] 117 6e-24
gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subc... 117 8e-24
emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group] 117 8e-24
emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indi... 117 8e-24
emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group] 117 8e-24
>ref|XP_007099662.1| Gag protease polyprotein-like protein [Theobroma cacao]
gi|508728474|gb|EOY20371.1| Gag protease polyprotein-like
protein [Theobroma cacao]
Length = 665
Score = 126 bits (317), Expect = 1e-26
Identities = 92/316 (29%), Positives = 143/316 (45%), Gaps = 19/316 (6%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREW 845
SK ++E + F G +D T A+DWI+ + + ++LD++ ++ ATR+L+ AR W
Sbjct: 46 SKKLKEARQLGCVSFTGELDATVAKDWINQVSKTLSDMRLDDDMKLMVATRLLEKRARTW 105
Query: 844 WLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSK 665
W SV + +TWS F FD +YF + +K EF +LKQGN++V +YE +F L
Sbjct: 106 WNSVKSRSATPQTWSDFLREFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELML 165
Query: 664 YAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPER 485
Y PD V +E + F GLR + + +T G + + E V AL R + + E
Sbjct: 166 YVPDLVKSEQDQASYFEEGLRNEIRERMTVTGREPHKEVVQMAL-------RAEKLAIEN 218
Query: 484 QSVPQNSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
+ + + +A +R S V G S S + V+ T+ P
Sbjct: 219 RRI-RTEFAKRRNPG-----------MSSSQPVKRGKDSAISGSTTSVSVTSPRPPFPPS 266
Query: 304 QRLWQNFQR--LRGGGRG-SGYKRAASDG---------------CGKSGHKRHVCPN-AS 182
Q+ F R + G GR G R + G CG++GH R CP
Sbjct: 267 QQRPSRFSRSAMTGSGRSFGGSDRCRNCGNYHSGLCREPTRCFQCGQTGHIRSNCPRLGR 326
Query: 181 TTMTIGSTPQHVDGER 134
T+ S+P D +R
Sbjct: 327 ATVVASSSPARTDIQR 342
>ref|XP_007028010.1| Gag protease polyprotein [Theobroma cacao]
gi|508716615|gb|EOY08512.1| Gag protease polyprotein
[Theobroma cacao]
Length = 404
Score = 126 bits (317), Expect = 1e-26
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 18/308 (5%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREW 845
SK ++E + F G +D T A+DWI+ + + + LD++ ++ ATR+L+ AR W
Sbjct: 110 SKKLKEARQLGCVSFTGELDATVAKDWINQVSETLSDMGLDDDMKLMVATRLLEKRARTW 169
Query: 844 WLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSK 665
W SV + +TWS F FD +YF + +K EF +LKQGN++V +YE +F L
Sbjct: 170 WNSVKSRSATPQTWSDFLREFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELML 229
Query: 664 YAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPER 485
Y PD V +E + F GLR + + +T +G + + E V AL R + + E
Sbjct: 230 YVPDLVKSEQDQASYFEEGLRNEIRERMTVIGREPHKEVVQMAL-------RAEKLATEN 282
Query: 484 QSVPQNSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
+ + + +A +R G+ S V G S S + ++ T+ P
Sbjct: 283 RRI-RTKFAKRR------NLGM-----SSSQPVKRGKDSATSGSTTSISVTSPRPPFPPS 330
Query: 304 QRLWQNFQR--LRGGGRG-SGYKRAASDG---------------CGKSGHKRHVCPNAST 179
Q+ F R + G G+ G+ R + G CG++GH R CP
Sbjct: 331 QQRPSRFSRSAMTGSGKSLGGFDRCRNCGNYHSGLCRGPTRCFQCGQTGHIRSNCPQLGR 390
Query: 178 TMTIGSTP 155
S+P
Sbjct: 391 ATVAASSP 398
>ref|XP_007023594.1| Gag protease polyprotein [Theobroma cacao]
gi|508778960|gb|EOY26216.1| Gag protease polyprotein
[Theobroma cacao]
Length = 426
Score = 125 bits (314), Expect = 3e-26
Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 19/316 (6%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREW 845
SK ++E + F G +D T A+DWI+ + + +KL+++ ++ ATR+L+ AR W
Sbjct: 110 SKKLKEARQLGCVSFTGELDATVAKDWINQVSETLSDMKLNDDMKLMVATRLLEKRARTW 169
Query: 844 WLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSK 665
W SV + +TWS F FD +YF + +K EF +LKQGN++V +YE +F L
Sbjct: 170 WNSVKSRSATPQTWSDFLREFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELML 229
Query: 664 YAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPER 485
Y PD V +E + F GLR + + +T G + + E V AL R + + E
Sbjct: 230 YVPDLVKSEQDQASYFEEGLRNEIRERMTVTGREPHKEVVQMAL-------RAEKLATEN 282
Query: 484 QSVPQNSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
+ + + +A +R G + VK G S S + ++ T+ P
Sbjct: 283 RRI-RTEFAKRR----NPGMSYSQSVK-------RGKDSAISRSTTSISVTSPRPPFPPS 330
Query: 304 QRLWQNFQR--LRGGGRG-SGYKRAASDG---------------CGKSGHKRHVCPN-AS 182
Q+ F R + G G+ G R + G CG++GH R CP
Sbjct: 331 QQRPSRFSRSAMTGSGKSFGGSDRCRNCGNYHSGLCREPTRCFQCGQTGHIRSNCPRLGR 390
Query: 181 TTMTIGSTPQHVDGER 134
T+ S+P D +R
Sbjct: 391 ATVVASSSPARTDIQR 406
>prf||1510387A retrotransposon del1-46
Length = 1443
Score = 125 bits (314), Expect = 3e-26
Identities = 71/182 (39%), Positives = 105/182 (57%), Gaps = 3/182 (1%)
Frame = -1
Query: 1021 KLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWW 842
+L++EF +P F G D EA WI ++ +I TL + +E V+ A+ L+ +A WW
Sbjct: 55 RLIKEFKGLNPPIFKGDPDPLEAHRWIRHVTKILDTLGVTDEQKVILASFQLQGEAEFWW 114
Query: 841 LSVLNVHKEVKT---WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRL 671
+ + ++ T W +F E+F EK+FP RD LE F L QG+++V QYE KF L
Sbjct: 115 DAKVRSREDDTTQIKWDEFVEVFTEKFFPDTVRDD-LERFMTLVQGSLTVAQYEAKFEEL 173
Query: 670 SKYAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSP 491
S+YAP V I+KVKRF GL+ ++ K L++ ++ Y E + RAL E EQR Q
Sbjct: 174 SRYAPYQVDINIRKVKRFEQGLKLSITKQLSSHLIKDYREVITRALSVEKREQREAQIMA 233
Query: 490 ER 485
+R
Sbjct: 234 KR 235
>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
Group] gi|31431495|gb|AAP53268.1| retrotransposon
protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1230
Score = 124 bits (311), Expect = 7e-26
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 7/211 (3%)
Frame = -1
Query: 1009 EFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLSVL 830
EF K P F+G + EAE+WI ME+ + ++ ++ AT ML+S A EWW +
Sbjct: 73 EFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHK 132
Query: 829 NVHKE--VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKYAP 656
+ E TW FKE F +KYFP + K +EF LKQGN SV +YE++F+RL+++AP
Sbjct: 133 KSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAP 192
Query: 655 DDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRA--LDFEHAEQRGTQYSPERQ 482
+ V T+ K +RF GLR L + + A + + E V++A L+ + EQR P+++
Sbjct: 193 EFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGYHEQRIEHGQPQKK 252
Query: 481 ---SVPQNSYANKRRGNYEKGFGLEKRVKSE 398
+ PQN + RGNY G +R SE
Sbjct: 253 FKTNNPQNQ--GRFRGNYS---GQMQRKSSE 278
>ref|XP_007049818.1| Gag protease polyprotein [Theobroma cacao]
gi|508702079|gb|EOX93975.1| Gag protease polyprotein
[Theobroma cacao]
Length = 548
Score = 120 bits (300), Expect = 1e-24
Identities = 78/260 (30%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREW 845
SK ++E + F G +D T A+DWI+ + + ++LD++ ++ ATR+L+ AR W
Sbjct: 110 SKKLKEVRQLGCVSFTGELDATRAKDWINQVSETLSDMRLDDDMKLMVATRLLQKRARTW 169
Query: 844 WLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSK 665
W SV + +TWS F FD +YF + +K EF +LKQGN++V +YE +F L
Sbjct: 170 WNSVKSRSATAQTWSDFLREFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELML 229
Query: 664 YAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPER 485
Y PD V +E + F GLR + + +T G + + E V AL R + + E
Sbjct: 230 YVPDLVKSEQDQASYFEEGLRNEIRERMTVTGREPHKEVVQMAL-------RAEKLATEN 282
Query: 484 QSVPQNSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
+ + + +A +R + S V G S S + V+ T+ P
Sbjct: 283 RRI-RTEFAKRRNPS-----------MSSSQPVKRGKDSAISGSTTSVSVTSPRPPFPPS 330
Query: 304 QRLWQNFQR--LRGGGRGSG 251
Q+ F R + G GR G
Sbjct: 331 QQRPSRFSRSAMTGSGRSFG 350
>ref|XP_007014287.1| Gag protease polyprotein [Theobroma cacao]
gi|508784650|gb|EOY31906.1| Gag protease polyprotein
[Theobroma cacao]
Length = 389
Score = 119 bits (298), Expect = 2e-24
Identities = 86/296 (29%), Positives = 134/296 (45%), Gaps = 18/296 (6%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREW 845
SK ++E + F G +D T A+DWI+ + + + LD++ ++ ATR+L+ AR W
Sbjct: 110 SKKLKEARQLGCVSFTGELDATVAKDWINQVFETLSDMGLDDDMKLMVATRLLEKRARTW 169
Query: 844 WLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSK 665
W SV + TWS F FD +YF + +K EF +LKQGN++V +YE +F L
Sbjct: 170 WNSVKSRSATPHTWSDFLREFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELML 229
Query: 664 YAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPER 485
Y PD V +E + F GLR + + +T +G + + E V AL R + + E
Sbjct: 230 YVPDLVKSEQDQASYFEEGLRNEIRERMTVIGREPHKEVVQMAL-------RAEKLATEN 282
Query: 484 QSVPQNSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
+ + + +A +R S V G S S + V+ T+ P
Sbjct: 283 RRI-RTEFAKRRNPG-----------MSSSQPVKRGKDSATSGSTTSVSVTSPRPPFPPS 330
Query: 304 QRLWQNFQR--LRGGGRG-SGYKRAASDG---------------CGKSGHKRHVCP 191
Q+ F R + G G+ G R + G CG++GH R CP
Sbjct: 331 QQRPSRFSRSAMIGSGKSLGGSDRCRNCGNYHSGLCRGPTRCFQCGQTGHIRSNCP 386
>emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group]
Length = 1762
Score = 119 bits (298), Expect = 2e-24
Identities = 84/323 (26%), Positives = 141/323 (43%), Gaps = 3/323 (0%)
Frame = -1
Query: 1015 MQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLS 836
+ +F++ P +F+ ++ EA+DW+ ++++ ++ L A+ L+ A +WW +
Sbjct: 419 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 478
Query: 835 VLNVHKEVKT--WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKY 662
N H E W +F F + P D K EEF LKQGN S+ +Y +F +L++Y
Sbjct: 479 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSINEYLSQFNKLARY 538
Query: 661 APDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPERQ 482
AP++V T+ KK+++F+ G+ + L A T+ +N+AL E A + T+ +R+
Sbjct: 539 APEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLEDARKEATEEYKKRK 598
Query: 481 SVPQ-NSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
S Q NS R Y + + V Q + Q A PS
Sbjct: 599 SNHQGNSSRGAPRPRYGQPMQYHQSVTQANRQPGYAPRPQINRPAPQPQQRA--PSGNTA 656
Query: 304 QRLWQNFQRLRGGGRGSGYKRAASDGCGKSGHKRHVCPNASTTMTIGSTPQHVDGERTHA 125
+F+ +G ++ C + GH CP T G H +G
Sbjct: 657 PNSVTSFKSPQGPSAVQCFR------CNQMGHYARQCPQNPTNTNSG----HANGSTART 706
Query: 124 VTEPNQEATENLIEGSSRAKGNG 56
P AT++ SS+A G G
Sbjct: 707 ---PTPAATQS--RPSSQASGQG 724
>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 119 bits (297), Expect = 3e-24
Identities = 76/205 (37%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
Frame = -1
Query: 1015 MQEFMKYHPTKFNGGIDLTEA-EDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWL 839
M+ FM P FNG EA E W+ M +I L + EE V AT ML A WW
Sbjct: 116 MKRFMVMQPPSFNGEPSAAEAAEHWLRRMRRILVGLDIPEERRVGLATYMLVDKADFWWE 175
Query: 838 SVLNVHK-EVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKY 662
S+ V+ EV TW +F+ +F KYF V + K EF +L QG MSV +YE +F+ LS++
Sbjct: 176 SMKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRF 235
Query: 661 APDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEH------------A 518
A +S E +K +RF GLRPA+ L + ++ Y+E V RAL E
Sbjct: 236 ALGMISEEGEKARRFQQGLRPAIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREQKG 295
Query: 517 EQRGTQYSPERQSVPQNSYANKRRG 443
+++G Q E PQ ++RG
Sbjct: 296 DRKGKQRMGESSQGPQQRQRTQQRG 320
>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
Length = 871
Score = 118 bits (296), Expect = 4e-24
Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGI-DLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDARE 848
+K +++F KY+PT F+G + D T A+ W+S++E I R +K E+ V A ML
Sbjct: 329 AKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA 388
Query: 847 WWLS---VLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFT 677
WW + +L TW +FKE F K+F RD K +EF NL+QG+M+V QY+ +F
Sbjct: 389 WWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFD 448
Query: 676 RLSKYAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQY 497
LS++AP+ ++TE + +F+ GLR + + A T+A+A+ A+D E+ +
Sbjct: 449 MLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK 508
Query: 496 SPERQS 479
+ R S
Sbjct: 509 TAGRGS 514
>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]
Length = 429
Score = 118 bits (296), Expect = 4e-24
Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGI-DLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDARE 848
+K +++F KY+PT F+G + D T A+ W+S++E I R +K E+ V A ML
Sbjct: 57 AKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA 116
Query: 847 WWLS---VLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFT 677
WW + +L TW +FKE F K+F RD K +EF NL+QG+M+V QY+ +F
Sbjct: 117 WWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFD 176
Query: 676 RLSKYAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQY 497
LS++AP+ ++TE + +F+ GLR + + A T+A+A+ A+D E+ +
Sbjct: 177 MLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK 236
Query: 496 SPERQS 479
+ R S
Sbjct: 237 TAGRGS 242
>ref|XP_006833015.1| hypothetical protein AMTR_s00876p00007370, partial [Amborella
trichopoda] gi|548837601|gb|ERM98293.1| hypothetical
protein AMTR_s00876p00007370, partial [Amborella
trichopoda]
Length = 366
Score = 118 bits (295), Expect = 5e-24
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Frame = -1
Query: 1030 RHSKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAR 851
R + + F K HP F GG D EAE+W+ +E I ++L V A +LK DAR
Sbjct: 100 RWEPIYERFRKQHPPNFEGGSDPMEAEEWLRTVEGIVEYMRLGNGDSVACAASLLKKDAR 159
Query: 850 EWWLSVLNVHKEVK--TWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFT 677
WW V+ ++V TW+ F ++F++KY+ R ++ EF NL+QG +V +Y +F
Sbjct: 160 IWW-DVIKQTRDVAAMTWADFVQVFNKKYYSEAIRSARVNEFTNLRQGKSTVTEYARQFD 218
Query: 676 RLSKYAPDDVSTEIKKVKRFIMGL--RPALDKALTAVGVQTYAEAVNRALDFEHAEQRGT 503
RL+K+A D V TE ++ RF GL R + D A++ V TYAE N A G
Sbjct: 219 RLAKFATDLVPTEFLRIHRFTEGLDSRISRDIAMSGVRATTYAEKDNTARWEARKASNGG 278
Query: 502 QYSPERQSVPQNSYANKR 449
+ + Q++ A+KR
Sbjct: 279 GDNKRKLPSNQHNEADKR 296
>ref|XP_007027895.1| Gag protease polyprotein [Theobroma cacao]
gi|508716500|gb|EOY08397.1| Gag protease polyprotein
[Theobroma cacao]
Length = 502
Score = 118 bits (295), Expect = 5e-24
Identities = 86/308 (27%), Positives = 134/308 (43%), Gaps = 18/308 (5%)
Frame = -1
Query: 1024 SKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREW 845
SK ++E + F G +D T A+DWI+ + + + LD++ ++ ATR+L+ AR W
Sbjct: 46 SKKLKEARQLGCVSFTGELDATVAKDWINQVSETLSDIGLDDDMKLMVATRLLEMRARTW 105
Query: 844 WLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSK 665
W SV + + WS F FD +YF + +K +EF +LKQ N+ V +YE +F L
Sbjct: 106 WNSVKSRFATPQIWSDFLREFDGQYFTYFHQKEKKKEFLSLKQRNLIVEEYETRFYELML 165
Query: 664 YAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPER 485
Y PD V +E+ + F GLR + + +T G + + E V AL E + + E
Sbjct: 166 YVPDLVKSEMDQASYFEEGLRNEIRERMTVTGREPHKEVVQMALQAE-------KLATEN 218
Query: 484 QSVPQNSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
+ + K G S V G ST S + V+ T+ P
Sbjct: 219 RRIRTEFAKRKNPG------------MSSSQPVKRGKESTTSGSTTSVSVTSPRPPFPPS 266
Query: 304 QRLWQNFQR--LRGGGRG-SGYKRAASDG---------------CGKSGHKRHVCPNAST 179
Q+ F R + G G+ G R + G CG++G R CP
Sbjct: 267 QQRLSRFTRSAMTGSGKSFGGSDRCRNCGNYHSGLCRGPTRCFQCGQTGDIRSNCPQLGR 326
Query: 178 TMTIGSTP 155
+ S+P
Sbjct: 327 ATVVASSP 334
>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
sativa Japonica Group]
Length = 1851
Score = 117 bits (294), Expect = 6e-24
Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 3/323 (0%)
Frame = -1
Query: 1015 MQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLS 836
+ +F++ P +F+ I+ EA+DW+ ++++ ++ L A+ L+ A +WW +
Sbjct: 418 LTDFLRSRPPEFSQTIEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 477
Query: 835 VLNVHKEVKT--WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKY 662
N H E W +F F + P D K EEF LKQG+ SV +Y +F +L++Y
Sbjct: 478 YCNAHPEPTNIAWDEFATAFRVAHVPESTIDMKKEEFNRLKQGHSSVNEYLSQFNKLARY 537
Query: 661 APDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPERQ 482
AP++V T+ KK+++F+ G+ + L A T+ +N+AL E A + T+ +R+
Sbjct: 538 APEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLEDARKEATEEYKKRK 597
Query: 481 SVPQ-NSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
S Q NS R Y + + V Q + Q A PS
Sbjct: 598 SNHQGNSSRGAPRPRYGQPMQYHQSVTQANRQSSYAPRPQMNRPAPPPQQRA--PSGNTA 655
Query: 304 QRLWQNFQRLRGGGRGSGYKRAASDGCGKSGHKRHVCPNASTTMTIGSTPQHVDGERTHA 125
+F+ +G ++ C + GH CP T ++P H +G
Sbjct: 656 PNSVTSFKSPQGPSAVQCFR------CNQMGHYARQCPQNPT----NTSPGHANGSTART 705
Query: 124 VTEPNQEATENLIEGSSRAKGNG 56
T ++ SS+A G G
Sbjct: 706 PTPAAAQS-----RPSSQASGQG 723
>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
Japonica Group]
Length = 443
Score = 117 bits (294), Expect = 6e-24
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
Frame = -1
Query: 1009 EFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLSVL 830
EF K P F+G + EAE+WI ME+ + ++ ++ AT ML+S A EWW +
Sbjct: 161 EFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHK 220
Query: 829 NVHKE--VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKYAP 656
+ E TW FKE F +KYFP + K +EF LKQGN SV +YE++F+RL+++AP
Sbjct: 221 KSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAP 280
Query: 655 DDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAE 515
+ V T+ K +RF GLR L + + A + + E V++A E E
Sbjct: 281 EFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGE 327
>emb|CAE04228.1| OSJNBa0011F23.1 [Oryza sativa Japonica Group]
Length = 1787
Score = 117 bits (294), Expect = 6e-24
Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 6/334 (1%)
Frame = -1
Query: 1039 ISLRHSKLMQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKS 860
+S SKL +F++ P +F+ ++ EA+DW+ ++++ ++ L A+ L+
Sbjct: 411 MSNNRSKLT-DFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRG 469
Query: 859 DAREWWLSVLNVHKEVKT--WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYEL 686
A +WW + N H E W +F F + P D K EEF LKQGN SV +Y
Sbjct: 470 PAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLS 529
Query: 685 KFTRLSKYAPDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRG 506
F +L++YAP++V T+ KK+++F+ G+ + L A T+ +N+AL E A +
Sbjct: 530 MFNKLARYAPEEVGTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLEDARKEA 589
Query: 505 TQYSPERQSVPQNSYANKRRG----NYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVA 338
T+ +R+S N N RG Y + + V Q +
Sbjct: 590 TEEYKKRKS---NHQGNSSRGAPCPRYGQPMQYHQSVTQANRQPGYAPRPQMNRPAPQPQ 646
Query: 337 QTAVIPSNTGYQRLWQNFQRLRGGGRGSGYKRAASDGCGKSGHKRHVCPNASTTMTIGST 158
Q A PS +F+ +G ++ C + GH CP T ++G
Sbjct: 647 QRA--PSGNTAPNSVTSFKSPQGPSAVQCFR------CNQMGHYARQCPQNPTNTSLG-- 696
Query: 157 PQHVDGERTHAVTEPNQEATENLIEGSSRAKGNG 56
H +G T ++ SS+A G G
Sbjct: 697 --HANGSTARTPTPAAAQS-----RPSSQASGQG 723
>gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1556
Score = 117 bits (293), Expect = 8e-24
Identities = 85/323 (26%), Positives = 141/323 (43%), Gaps = 3/323 (0%)
Frame = -1
Query: 1015 MQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLS 836
+ +F++ P +F+ ++ EA+DW+ ++++ ++ L A+ L+ A +WW +
Sbjct: 139 LTDFLRSCPPEFSQTVEPVEADDWLKDVDRKLNFVQCTPVEKTLYASHQLRGPAADWWEN 198
Query: 835 VLNVHKEVKT--WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKY 662
N H E W +F F + P D K EEF LKQGN SV +Y +F +L++Y
Sbjct: 199 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARY 258
Query: 661 APDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPERQ 482
AP++V T+ KK+++F+ G+ + L A T+ +N+AL E A + T+ +R+
Sbjct: 259 APEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLEDARKEATEEYKKRK 318
Query: 481 SVPQ-NSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
S Q NS R Y + + V Q + Q A PS
Sbjct: 319 SNHQGNSSRGAPRPRYGQPMQYHQSVTQANHQPGYAPRPQMNRPAPQPQQRA--PSGNTA 376
Query: 304 QRLWQNFQRLRGGGRGSGYKRAASDGCGKSGHKRHVCPNASTTMTIGSTPQHVDGERTHA 125
+F+ +G ++ C + GH CP T G H +G
Sbjct: 377 PNSVTSFKSPQGPSAVQCFR------CNRMGHYARQCPRNPTNTNSG----HANGSTART 426
Query: 124 VTEPNQEATENLIEGSSRAKGNG 56
P A ++L SS+A G G
Sbjct: 427 ---PAPAAAQSL--PSSQASGQG 444
>emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group]
Length = 1680
Score = 117 bits (293), Expect = 8e-24
Identities = 83/323 (25%), Positives = 140/323 (43%), Gaps = 3/323 (0%)
Frame = -1
Query: 1015 MQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLS 836
+ +F++ P +F+ ++ EA+DW+ ++++ ++ L A+ L+ A +WW +
Sbjct: 414 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNIVQCTPVEKTLYASHQLRGPAADWWEN 473
Query: 835 VLNVHKEVKT--WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKY 662
N H E W +F F + P D K EEF LKQGN SV +Y +F +L++Y
Sbjct: 474 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSQFNKLARY 533
Query: 661 APDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPERQ 482
AP++V T+ KK+++F+ G+ + L A T+ +N+AL E A + T+ +R+
Sbjct: 534 APEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLEDARKEATEEYRKRK 593
Query: 481 SVPQ-NSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
S Q NS R Y + + V Q + Q A PS
Sbjct: 594 SNHQGNSSRGAPRPRYGQPMQYHQSVTQANRQPGYAPRPQMNRPTPQPQQRA--PSGNTA 651
Query: 304 QRLWQNFQRLRGGGRGSGYKRAASDGCGKSGHKRHVCPNASTTMTIGSTPQHVDGERTHA 125
+F+ G ++ C + GH CP ST + +H +G
Sbjct: 652 PNSVTSFKSPLGPSAVQCFR------CNQMGHYARQCPQNST----NTNSEHANGSTART 701
Query: 124 VTEPNQEATENLIEGSSRAKGNG 56
T ++ SS+A G G
Sbjct: 702 PTPAAAQS-----RPSSQASGQG 719
>emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indica Group]
Length = 1680
Score = 117 bits (293), Expect = 8e-24
Identities = 83/323 (25%), Positives = 140/323 (43%), Gaps = 3/323 (0%)
Frame = -1
Query: 1015 MQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLS 836
+ +F++ P +F+ ++ EA+DW+ ++++ ++ L A+ L+ A +WW +
Sbjct: 414 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNIVQCTPVEKTLYASHQLRGPAADWWEN 473
Query: 835 VLNVHKEVKT--WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKY 662
N H E W +F F + P D K EEF LKQGN SV +Y +F +L++Y
Sbjct: 474 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNSVNEYLSQFNKLARY 533
Query: 661 APDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPERQ 482
AP++V T+ KK+++F+ G+ + L A T+ +N+AL E A + T+ +R+
Sbjct: 534 APEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLEDARKEATEEYRKRK 593
Query: 481 SVPQ-NSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
S Q NS R Y + + V Q + Q A PS
Sbjct: 594 SNHQGNSSRGAPRPRYGQPMQYHQSVTQANRQPGYAPRPQMNRPTPQPQQRA--PSGNTA 651
Query: 304 QRLWQNFQRLRGGGRGSGYKRAASDGCGKSGHKRHVCPNASTTMTIGSTPQHVDGERTHA 125
+F+ G ++ C + GH CP ST + +H +G
Sbjct: 652 PNSVTSFKSPLGPSAVQCFR------CNQMGHYARQCPQNST----NTNSEHANGSTART 701
Query: 124 VTEPNQEATENLIEGSSRAKGNG 56
T ++ SS+A G G
Sbjct: 702 PTPAAAQS-----RPSSQASGQG 719
>emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 117 bits (293), Expect = 8e-24
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 3/323 (0%)
Frame = -1
Query: 1015 MQEFMKYHPTKFNGGIDLTEAEDWISNMEQIARTLKLDEESLVLSATRMLKSDAREWWLS 836
+ +F++ P +F+ ++ EA+DW+ ++++ ++ L A+ L+ A +WW +
Sbjct: 418 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 477
Query: 835 VLNVHKEVKT--WSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYELKFTRLSKY 662
N H E W +F F + P D K EEF LKQGN SV +Y +F +L++Y
Sbjct: 478 YCNAHPEPTNIVWDEFAMAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARY 537
Query: 661 APDDVSTEIKKVKRFIMGLRPALDKALTAVGVQTYAEAVNRALDFEHAEQRGTQYSPERQ 482
AP++V+T+ KK+++F+ G+ + + A T+ +N+AL E A + T+ +R+
Sbjct: 538 APEEVNTDKKKIRKFLKGIAVGMRLQMLAHDFPTFQHMINKALLLEDARKEATEEYKKRK 597
Query: 481 SVPQ-NSYANKRRGNYEKGFGLEKRVKSEGSQVVTGTHSTASNTIAVVAQTAVIPSNTGY 305
S Q NS R Y + + V Q + Q A PS
Sbjct: 598 SNHQGNSSRGAPRPRYGQPMQYHQSVTQANHQPGYAPRPQMNRPAPQPQQRA--PSGNTA 655
Query: 304 QRLWQNFQRLRGGGRGSGYKRAASDGCGKSGHKRHVCPNASTTMTIGSTPQHVDGERTHA 125
+F+ +G ++ C ++GH CP T G H +G
Sbjct: 656 PNSVTSFKSPQGPSAVQCFR------CNQTGHYARQCPQNPTNTNSG----HANGSTART 705
Query: 124 VTEPNQEATENLIEGSSRAKGNG 56
T ++ SS+A G G
Sbjct: 706 PTPAVAQS-----RPSSQASGQG 723