BLASTX nr result
ID: Cocculus23_contig00006928
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00006928
(753 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007009948.1| 3'-5'-exoribonuclease family protein isoform... 369 e-100
ref|XP_007009953.1| 3'-5'-exoribonuclease family protein isoform... 365 9e-99
gb|EYU42961.1| hypothetical protein MIMGU_mgv1a011142mg [Mimulus... 363 3e-98
ref|XP_006298255.1| hypothetical protein CARUB_v10014316mg [Caps... 362 1e-97
ref|XP_006469488.1| PREDICTED: exosome complex component RRP42-l... 361 1e-97
ref|XP_006447775.1| hypothetical protein CICLE_v10016158mg [Citr... 361 1e-97
ref|XP_007215763.1| hypothetical protein PRUPE_ppa009546mg [Prun... 361 2e-97
ref|XP_002321194.1| hypothetical protein POPTR_0014s16420g [Popu... 361 2e-97
ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp.... 360 4e-97
ref|XP_007151814.1| hypothetical protein PHAVU_004G077200g [Phas... 359 7e-97
ref|XP_007205672.1| hypothetical protein PRUPE_ppa009541mg [Prun... 358 9e-97
ref|XP_004498271.1| PREDICTED: exosome complex component RRP42-l... 357 2e-96
ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l... 357 2e-96
ref|XP_006407801.1| hypothetical protein EUTSA_v10021262mg [Eutr... 356 4e-96
ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidops... 356 6e-96
ref|XP_004303561.1| PREDICTED: exosome complex component RRP42-l... 355 7e-96
ref|XP_007009947.1| 3'-5'-exoribonuclease family protein isoform... 355 9e-96
ref|XP_002530222.1| exosome complex exonuclease rrp42, putative ... 355 9e-96
ref|XP_004977147.1| PREDICTED: exosome complex component RRP42-l... 355 1e-95
gb|ACG32102.1| exosome complex exonuclease RRP42 [Zea mays] gi|4... 355 1e-95
>ref|XP_007009948.1| 3'-5'-exoribonuclease family protein isoform 2 [Theobroma cacao]
gi|590565441|ref|XP_007009949.1| 3'-5'-exoribonuclease
family protein isoform 2 [Theobroma cacao]
gi|508726861|gb|EOY18758.1| 3'-5'-exoribonuclease family
protein isoform 2 [Theobroma cacao]
gi|508726862|gb|EOY18759.1| 3'-5'-exoribonuclease family
protein isoform 2 [Theobroma cacao]
Length = 287
Score = 369 bits (946), Expect = e-100
Identities = 186/247 (75%), Positives = 210/247 (85%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLSVGEK FI+GGI+QDLRSDGRKRL YRPI VE GVIPQA+GSAR+R+G TDVIASV
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETGVIPQAHGSARIRLGATDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+GKPS L P+KGK+AI VDCS A P+FEGRGGEELSTELSVALQRCLLGGKSG+G+
Sbjct: 61 KAELGKPSALQPDKGKIAIYVDCSPTAAPMFEGRGGEELSTELSVALQRCLLGGKSGSGS 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GID SL ++EGK+CWDLYI+GLVI IKAALSNT IPKVNVA E S +
Sbjct: 121 GIDPSSLVIVEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPKVNVASETSGD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEV+ISDE+FL+FDTS +PVIVTLTKVGRHYIVDAT EES +SSA+S+SIN +G IC
Sbjct: 181 EQPEVNISDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQISSAISISINRKGHIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_007009953.1| 3'-5'-exoribonuclease family protein isoform 7 [Theobroma cacao]
gi|508726866|gb|EOY18763.1| 3'-5'-exoribonuclease family
protein isoform 7 [Theobroma cacao]
Length = 288
Score = 365 bits (937), Expect = 9e-99
Identities = 187/248 (75%), Positives = 210/248 (84%), Gaps = 1/248 (0%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLSVGEK FI+GGI+QDLRSDGRKRL YRPI VE GVIPQA+GSAR+R+G TDVIASV
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETGVIPQAHGSARIRLGATDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSG-AG 369
KAE+GKPS L P+KGK+AI VDCS A P+FEGRGGEELSTELSVALQRCLLGGKSG AG
Sbjct: 61 KAELGKPSALQPDKGKIAIYVDCSPTAAPMFEGRGGEELSTELSVALQRCLLGGKSGSAG 120
Query: 370 AGIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSA 549
+GID SL ++EGK+CWDLYI+GLVI IKAALSNT IPKVNVA E S
Sbjct: 121 SGIDPSSLVIVEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPKVNVASETSG 180
Query: 550 EEQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQI 729
+EQPEV+ISDE+FL+FDTS +PVIVTLTKVGRHYIVDAT EES +SSA+S+SIN +G I
Sbjct: 181 DEQPEVNISDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQISSAISISINRKGHI 240
Query: 730 CGLTKRGG 753
CGLTKRGG
Sbjct: 241 CGLTKRGG 248
>gb|EYU42961.1| hypothetical protein MIMGU_mgv1a011142mg [Mimulus guttatus]
Length = 291
Score = 363 bits (932), Expect = 3e-98
Identities = 181/247 (73%), Positives = 210/247 (85%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GE+ FIKGGI+QDLR+DGRKRL YRPI VE G+IPQA+GSARV++G TDVIASV
Sbjct: 1 MVGLSLGEQNFIKGGIAQDLRTDGRKRLTYRPIFVETGIIPQASGSARVKLGGTDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+P+ HP+KGKV+I VDCS A P FEGRGGEELSTELS ALQRCLLGGKSG+GA
Sbjct: 61 KAELGRPNPSHPDKGKVSIYVDCSPTAEPTFEGRGGEELSTELSSALQRCLLGGKSGSGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SLS+++GK+CWDLYI+GLV+ IKAALSNT IPKV VA SA+
Sbjct: 121 GIDLSSLSIVQGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALSNTAIPKVQVAANASAD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
+QPEVD+SDE+FL+FDT++VPVIVTLTKVGRHYIVDAT EES MSSA+SVSIN +G IC
Sbjct: 181 QQPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATTEEESQMSSAISVSINRQGGIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_006298255.1| hypothetical protein CARUB_v10014316mg [Capsella rubella]
gi|482566964|gb|EOA31153.1| hypothetical protein
CARUB_v10014316mg [Capsella rubella]
Length = 287
Score = 362 bits (928), Expect = 1e-97
Identities = 182/247 (73%), Positives = 209/247 (84%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLSVGE+ F+KGGI+QDLR+DGRKRLAYRPI VE GVIPQANGSARV++G TDVIASV
Sbjct: 1 MVGLSVGEQHFVKGGIAQDLRTDGRKRLAYRPIYVETGVIPQANGSARVKIGGTDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAEIG+PS L P+KGKVA+ +DCS A P F GRGGEELS+EL++ALQRCLLGGKSGAGA
Sbjct: 61 KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GI+L SL + EGK+CWDLYI+GLVI IKAAL+NT IPKVNV+ EV+ +
Sbjct: 121 GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPE+DISDE++L+FDTSSVPVIVTLTKVG HYIVDAT EES MSSAVS+S+N G IC
Sbjct: 181 EQPEIDISDEEYLQFDTSSVPVIVTLTKVGAHYIVDATAEEESQMSSAVSISVNRVGHIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_006469488.1| PREDICTED: exosome complex component RRP42-like isoform X1 [Citrus
sinensis]
Length = 294
Score = 361 bits (927), Expect = 1e-97
Identities = 185/247 (74%), Positives = 205/247 (82%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS GEK+FIKGGI+QDLRSDGRKR YRPI VE GVIPQANGSARVRMG TDVIASV
Sbjct: 8 MVGLSEGEKEFIKGGIAQDLRSDGRKRYTYRPIYVETGVIPQANGSARVRMGSTDVIASV 67
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+PS + P+KGKVAI VDCS A P FEGRGGEELS ELS ALQRCLLGGKSGAGA
Sbjct: 68 KAELGRPSAMQPDKGKVAIFVDCSPTAEPTFEGRGGEELSAELSSALQRCLLGGKSGAGA 127
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL ++EGK+CWDLYI+GLVI IKAALSNT IP V+VA E +++
Sbjct: 128 GIDLSSLVVVEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPSVHVAAEAASD 187
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVDISDE+FL+FDTS VPVI TLTKVG+HYIVDAT EES MSSAVS+SIN +G IC
Sbjct: 188 EQPEVDISDEEFLQFDTSGVPVITTLTKVGKHYIVDATLEEESQMSSAVSISINRQGHIC 247
Query: 733 GLTKRGG 753
G+ KRGG
Sbjct: 248 GMIKRGG 254
>ref|XP_006447775.1| hypothetical protein CICLE_v10016158mg [Citrus clementina]
gi|568830401|ref|XP_006469489.1| PREDICTED: exosome
complex component RRP42-like isoform X2 [Citrus
sinensis] gi|568830403|ref|XP_006469490.1| PREDICTED:
exosome complex component RRP42-like isoform X3 [Citrus
sinensis] gi|568830405|ref|XP_006469491.1| PREDICTED:
exosome complex component RRP42-like isoform X4 [Citrus
sinensis] gi|557550386|gb|ESR61015.1| hypothetical
protein CICLE_v10016158mg [Citrus clementina]
Length = 287
Score = 361 bits (927), Expect = 1e-97
Identities = 185/247 (74%), Positives = 205/247 (82%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS GEK+FIKGGI+QDLRSDGRKR YRPI VE GVIPQANGSARVRMG TDVIASV
Sbjct: 1 MVGLSEGEKEFIKGGIAQDLRSDGRKRYTYRPIYVETGVIPQANGSARVRMGSTDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+PS + P+KGKVAI VDCS A P FEGRGGEELS ELS ALQRCLLGGKSGAGA
Sbjct: 61 KAELGRPSAMQPDKGKVAIFVDCSPTAEPTFEGRGGEELSAELSSALQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL ++EGK+CWDLYI+GLVI IKAALSNT IP V+VA E +++
Sbjct: 121 GIDLSSLVVVEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPSVHVAAEAASD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVDISDE+FL+FDTS VPVI TLTKVG+HYIVDAT EES MSSAVS+SIN +G IC
Sbjct: 181 EQPEVDISDEEFLQFDTSGVPVITTLTKVGKHYIVDATLEEESQMSSAVSISINRQGHIC 240
Query: 733 GLTKRGG 753
G+ KRGG
Sbjct: 241 GMIKRGG 247
>ref|XP_007215763.1| hypothetical protein PRUPE_ppa009546mg [Prunus persica]
gi|462411913|gb|EMJ16962.1| hypothetical protein
PRUPE_ppa009546mg [Prunus persica]
Length = 287
Score = 361 bits (926), Expect = 2e-97
Identities = 185/247 (74%), Positives = 206/247 (83%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GEK FI+GGI+QDLRSDGRKRL RPI VE GVI QANGSARVRMG TDVIASV
Sbjct: 1 MVGLSIGEKHFIQGGIAQDLRSDGRKRLTTRPIYVETGVISQANGSARVRMGATDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+P+ L P+KGKV ++VDCS A P+FEGRGGEELS ELSVALQ CLLGGKSG+GA
Sbjct: 61 KAELGRPNVLQPDKGKVVVNVDCSPTAAPMFEGRGGEELSAELSVALQCCLLGGKSGSGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL ++EGKICWDLYI+GLV+ IKAALSNT IPKVNVA S +
Sbjct: 121 GIDLSSLVVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVNVAAGASGD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVD+SDE+FL+FDTS VPVIVTLTKVGRHYIVDAT EES MSSAVS+SIN +G IC
Sbjct: 181 EQPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISINRQGHIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_002321194.1| hypothetical protein POPTR_0014s16420g [Populus trichocarpa]
gi|566204599|ref|XP_006375564.1| hypothetical protein
POPTR_0014s16420g [Populus trichocarpa]
gi|222861967|gb|EEE99509.1| hypothetical protein
POPTR_0014s16420g [Populus trichocarpa]
gi|550324331|gb|ERP53361.1| hypothetical protein
POPTR_0014s16420g [Populus trichocarpa]
Length = 287
Score = 361 bits (926), Expect = 2e-97
Identities = 185/246 (75%), Positives = 208/246 (84%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GEK FI+GGI Q+LRSDGRKR AYRPIS+E GVIPQANGSAR+R+G T+VIASV
Sbjct: 1 MVGLSLGEKHFIQGGIDQNLRSDGRKRDAYRPISIETGVIPQANGSARIRIGATEVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+P+ L P+KGKVAI VDCS +A P+FEGRGGEELS ELSVALQRCLLGGKSGAGA
Sbjct: 61 KAELGRPNALQPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL + EGKICWDLYI+GLVI IKAALSNT IP+V VA S +
Sbjct: 121 GIDLSSLIVAEGKICWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVDISDE+F++FDTS VPVIVTLTKVGRHYIVDAT EES MSSAVSVSI+ +GQIC
Sbjct: 181 EQPEVDISDEEFMQFDTSGVPVIVTLTKVGRHYIVDATSEEESQMSSAVSVSISRKGQIC 240
Query: 733 GLTKRG 750
GL+KRG
Sbjct: 241 GLSKRG 246
>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328387|gb|EFH58806.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 360 bits (923), Expect = 4e-97
Identities = 180/247 (72%), Positives = 208/247 (84%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GE+ F+KGGI+QDLR+DGRKRL YRPI VE GVIPQANGSARV++G TDVIASV
Sbjct: 1 MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAEIG+PS L P+KGKVA+ +DCS A P F GRGGEELS+EL++ALQRCLLGGKSGAGA
Sbjct: 61 KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GI+L SL + EGK+CWDLYI+GLVI IKAAL+NT IPKVNV+ EV+ +
Sbjct: 121 GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPE+DISDE++L+FDTSSVPVIVTLTKVG HYIVDAT EES MSSAVS+S+N G IC
Sbjct: 181 EQPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRAGHIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_007151814.1| hypothetical protein PHAVU_004G077200g [Phaseolus vulgaris]
gi|561025123|gb|ESW23808.1| hypothetical protein
PHAVU_004G077200g [Phaseolus vulgaris]
Length = 286
Score = 359 bits (921), Expect = 7e-97
Identities = 182/247 (73%), Positives = 207/247 (83%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GEK FI+GGI+QDLR DGRKRLAYRPISVE GVIPQANGSAR+RMG TDVIASV
Sbjct: 1 MVGLSLGEKHFIQGGIAQDLRCDGRKRLAYRPISVETGVIPQANGSARIRMGATDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+PS L P+KGKV+I +DCS+ A P FEGRGG+EL+ ELS ALQ CLLGGKSGAGA
Sbjct: 61 KAELGRPSLLLPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQDCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL ++EGKICWDLYI+GLV+ IKAALSNT IP+V VA S +
Sbjct: 121 GIDLSSLIIVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVD+SDE+FL+FDTS VPVIVTLTKVGRHYIVDAT EES MSSAVS+S+N +G IC
Sbjct: 181 EQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGYIC 240
Query: 733 GLTKRGG 753
G+TKRGG
Sbjct: 241 GITKRGG 247
>ref|XP_007205672.1| hypothetical protein PRUPE_ppa009541mg [Prunus persica]
gi|462401314|gb|EMJ06871.1| hypothetical protein
PRUPE_ppa009541mg [Prunus persica]
Length = 287
Score = 358 bits (920), Expect = 9e-97
Identities = 183/247 (74%), Positives = 204/247 (82%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GEK FI+GGI+QDLRSDGRKRL RPI VE GVI QANGSARVRMG TDVIA V
Sbjct: 1 MVGLSIGEKHFIQGGIAQDLRSDGRKRLTIRPIYVETGVISQANGSARVRMGATDVIACV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+P+ L P+KGKV ++VDCS A P+FEGRGGEELS ELSVALQRCLLGGKSG+GA
Sbjct: 61 KAELGRPNALQPDKGKVVVNVDCSPTAAPMFEGRGGEELSAELSVALQRCLLGGKSGSGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL ++EGKICWDLYI+GLV+ IKAALSNT IPKVNVA S +
Sbjct: 121 GIDLSSLVVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVNVAAGASGD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVD+SDE+FL+FDTS VPVIVTLTKVGRHYIVDAT EES M AVS+SIN +G IC
Sbjct: 181 EQPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMCLAVSISINRQGHIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_004498271.1| PREDICTED: exosome complex component RRP42-like [Cicer arietinum]
Length = 286
Score = 357 bits (917), Expect = 2e-96
Identities = 179/247 (72%), Positives = 204/247 (82%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GE+ FI+GGI+QDLR DGRKRL YRPI VE G+IPQANGSARVR+G TDVIASV
Sbjct: 1 MVGLSLGEQHFIQGGIAQDLRCDGRKRLTYRPIYVETGIIPQANGSARVRIGATDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+GKPS + P+KGKV I +DCS+ A P FEGRGGEELS+ELS ALQRCLLG KSGAGA
Sbjct: 61 KAELGKPSFMQPDKGKVLIHIDCSSTAEPAFEGRGGEELSSELSTALQRCLLGAKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GID SL ++EGKICWDLYI+GLV+ IKAALSNT IP V V S++
Sbjct: 121 GIDRSSLVVVEGKICWDLYIDGLVVSSDGNLLDALSAAIKAALSNTGIPSVKVTAGASSD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVDISDE+FL+FDTS VPVIVTLTK+GRHYIVDATP EES M+SAVS+SIN +G IC
Sbjct: 181 EQPEVDISDEEFLQFDTSGVPVIVTLTKIGRHYIVDATPEEESQMNSAVSISINRKGHIC 240
Query: 733 GLTKRGG 753
G+TKRGG
Sbjct: 241 GITKRGG 247
>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
Length = 286
Score = 357 bits (916), Expect = 2e-96
Identities = 182/247 (73%), Positives = 204/247 (82%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GE FI+GGI+QDLR DGRKRL YRPISVE GVIPQ NGSARVRMG TDVIASV
Sbjct: 1 MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+GKPS L P+KGKV+I VDCS+ A P FEGRGG+EL+ ELS ALQRCLLGGKSGAGA
Sbjct: 61 KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL ++EGKICWDLYI+GLV+ IKAALSNT IP+V VA S +
Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
E PEVD+SDE+FL+FDTS VPVIVTLTKVGRHYIVDAT EES MSSAVS+S+N +G IC
Sbjct: 181 EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240
Query: 733 GLTKRGG 753
G+TKRGG
Sbjct: 241 GITKRGG 247
>ref|XP_006407801.1| hypothetical protein EUTSA_v10021262mg [Eutrema salsugineum]
gi|557108947|gb|ESQ49254.1| hypothetical protein
EUTSA_v10021262mg [Eutrema salsugineum]
Length = 287
Score = 356 bits (914), Expect = 4e-96
Identities = 179/247 (72%), Positives = 206/247 (83%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS+GE+ F+KGGI+QDLR+DGRKRL YRPI VE GVIPQANGSARVR+G TDVIASV
Sbjct: 1 MVGLSIGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAEIG+PS L P+KGKVA+ +DCS A P F GRGGEELS+EL++ALQRCLLGGKSGAGA
Sbjct: 61 KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GI+L SL + EGK+CWDLYI+GLVI IKAAL+NT IPKV V+ EV+ +
Sbjct: 121 GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVQVSAEVADD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPE+DISDE++ +FDTSSVPVIVTLTKVG HYIVDAT EES MSSAVS+S+N G IC
Sbjct: 181 EQPEIDISDEEYQQFDTSSVPVIVTLTKVGAHYIVDATTEEESQMSSAVSISVNRVGHIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
gi|30680427|ref|NP_850537.1| 3'-5'-exoribonuclease
family protein [Arabidopsis thaliana]
gi|11762184|gb|AAG40370.1|AF325018_1 AT3g07750
[Arabidopsis thaliana] gi|26453010|dbj|BAC43581.1|
putative 3' exoribonuclease [Arabidopsis thaliana]
gi|56744222|gb|AAW28551.1| At3g07750 [Arabidopsis
thaliana] gi|332641077|gb|AEE74598.1|
3'-5'-exoribonuclease family protein [Arabidopsis
thaliana] gi|332641078|gb|AEE74599.1|
3'-5'-exoribonuclease family protein [Arabidopsis
thaliana]
Length = 286
Score = 356 bits (913), Expect = 6e-96
Identities = 179/246 (72%), Positives = 206/246 (83%)
Frame = +1
Query: 16 VGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASVK 195
+GLS+GE+ FIKGGI+QDLR+DGRKRL YRPI VE GVIPQANGSARVR+G TDVIASVK
Sbjct: 1 MGLSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVK 60
Query: 196 AEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGAG 375
AEIG+PS L P+KGKVA+ +DCS A P F GRGGEELS+EL++ALQRCLLGGKSGAGAG
Sbjct: 61 AEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAG 120
Query: 376 IDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAEE 555
I+L SL + EGK+CWDLYI+GLVI IKAAL+NT IPKVNV+ EV+ +E
Sbjct: 121 INLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADDE 180
Query: 556 QPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQICG 735
QPE+DISDE++L+FDTSSVPVIVTLTKVG HYIVDAT EES MSSAVS+S+N G ICG
Sbjct: 181 QPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRTGHICG 240
Query: 736 LTKRGG 753
LTKR G
Sbjct: 241 LTKRSG 246
>ref|XP_004303561.1| PREDICTED: exosome complex component RRP42-like [Fragaria vesca
subsp. vesca]
Length = 287
Score = 355 bits (912), Expect = 7e-96
Identities = 178/247 (72%), Positives = 208/247 (84%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLSVGEK FI+GGI+QDLRSDGRKRL RP+ VE GVI Q+NGS+R R+G T+VIASV
Sbjct: 1 MVGLSVGEKYFIQGGIAQDLRSDGRKRLTPRPMFVETGVISQSNGSSRFRIGATEVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+PS LHP+KGKV I+VDCS A P+FEGRGGEELS ELSVALQRCLLGGKSG+GA
Sbjct: 61 KAELGRPSALHPDKGKVFINVDCSPTAAPIFEGRGGEELSAELSVALQRCLLGGKSGSGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL++++GKICWDLYIEGLV+ IKAALSNT IP+VNVA V +
Sbjct: 121 GIDLSSLAIVDGKICWDLYIEGLVVSSDGNLLDALGAAIKAALSNTGIPRVNVAAGVEGD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
+QPEVD+SDE+FL+FDT+ VPVIVTLT+VGRHYIVDAT EES M+SAVS+S+N +G IC
Sbjct: 181 DQPEVDVSDEEFLQFDTTKVPVIVTLTEVGRHYIVDATSEEESQMNSAVSISVNRQGNIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_007009947.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
gi|508726860|gb|EOY18757.1| 3'-5'-exoribonuclease family
protein isoform 1 [Theobroma cacao]
Length = 283
Score = 355 bits (911), Expect = 9e-96
Identities = 182/247 (73%), Positives = 206/247 (83%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLSVGEK FI+GGI+QDLRSDGRKRL YRPI VE G A+GSAR+R+G TDVIASV
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETG----AHGSARIRLGATDVIASV 56
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+GKPS L P+KGK+AI VDCS A P+FEGRGGEELSTELSVALQRCLLGGKSG+G+
Sbjct: 57 KAELGKPSALQPDKGKIAIYVDCSPTAAPMFEGRGGEELSTELSVALQRCLLGGKSGSGS 116
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GID SL ++EGK+CWDLYI+GLVI IKAALSNT IPKVNVA E S +
Sbjct: 117 GIDPSSLVIVEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPKVNVASETSGD 176
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEV+ISDE+FL+FDTS +PVIVTLTKVGRHYIVDAT EES +SSA+S+SIN +G IC
Sbjct: 177 EQPEVNISDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQISSAISISINRKGHIC 236
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 237 GLTKRGG 243
>ref|XP_002530222.1| exosome complex exonuclease rrp42, putative [Ricinus communis]
gi|223530269|gb|EEF32169.1| exosome complex exonuclease
rrp42, putative [Ricinus communis]
Length = 287
Score = 355 bits (911), Expect = 9e-96
Identities = 184/247 (74%), Positives = 204/247 (82%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLSVGE+ FI+GGI+Q+LRSDGRKR AYRPI VE GVIPQANGSARVR+G T+VIASV
Sbjct: 1 MVGLSVGERNFIQGGINQNLRSDGRKRDAYRPIFVETGVIPQANGSARVRIGATEVIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+G+P+ P+KGKVAI VDCS +A P FE RGGEELS ELS ALQ CLLGGKSGAGA
Sbjct: 61 KAELGRPNAFQPDKGKVAIFVDCSPVAEPTFEARGGEELSAELSAALQHCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
GIDL SL + EGKICWDLYI+GLV+ IKAALSNT IPKV+VA +
Sbjct: 121 GIDLSSLVVAEGKICWDLYIDGLVVSFDGNLLDALGAAIKAALSNTGIPKVHVAAGGLGD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
EQPEVDISDE+FL+FDTS VPVIVTLTKVGRHYIVDAT EES+MSSAVSVSIN +G IC
Sbjct: 181 EQPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYIVDATSEEESYMSSAVSVSINRKGHIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>ref|XP_004977147.1| PREDICTED: exosome complex component RRP42-like isoform X1 [Setaria
italica] gi|514804552|ref|XP_004977148.1| PREDICTED:
exosome complex component RRP42-like isoform X2 [Setaria
italica]
Length = 284
Score = 355 bits (910), Expect = 1e-95
Identities = 177/247 (71%), Positives = 207/247 (83%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS GEK FI+GGI+QD+R+DGR+RL +R +SVE GVIPQANGSARVR+G T++IASV
Sbjct: 1 MVGLSEGEKHFIRGGIAQDIRTDGRRRLQFRALSVETGVIPQANGSARVRLGATEIIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+GKPS LHP+KGKV+I VDCS A P FEGRG EELS ELSVALQRCLLGGKSGAGA
Sbjct: 61 KAELGKPSILHPDKGKVSIFVDCSPTAEPTFEGRGSEELSAELSVALQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
IDL SL ++EGK+CWDLYI+GLV+ IK ALS+T +PKVNV+ +++
Sbjct: 121 AIDLSSLIVVEGKVCWDLYIDGLVVSSDGNLLDALATAIKVALSDTGLPKVNVSLSAASD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
E+PEVD+SDE+FL+FDTSSVPVI+TLTKVGRHYIVDAT EES MSSAVSVS+N GQIC
Sbjct: 181 EEPEVDVSDEEFLQFDTSSVPVIITLTKVGRHYIVDATSEEESQMSSAVSVSVNRNGQIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247
>gb|ACG32102.1| exosome complex exonuclease RRP42 [Zea mays]
gi|413935080|gb|AFW69631.1| exosome complex exonuclease
RRP42 isoform 1 [Zea mays] gi|413935081|gb|AFW69632.1|
exosome complex exonuclease RRP42 isoform 2 [Zea mays]
gi|413935082|gb|AFW69633.1| exosome complex exonuclease
RRP42 isoform 3 [Zea mays] gi|413935083|gb|AFW69634.1|
exosome complex exonuclease RRP42 isoform 4 [Zea mays]
Length = 287
Score = 355 bits (910), Expect = 1e-95
Identities = 177/247 (71%), Positives = 207/247 (83%)
Frame = +1
Query: 13 MVGLSVGEKQFIKGGISQDLRSDGRKRLAYRPISVELGVIPQANGSARVRMGETDVIASV 192
MVGLS GEK FI+GGI+QDLR+DGR+RL +R +SV+ GVIPQANGSARVR+G TD+IASV
Sbjct: 1 MVGLSEGEKHFIRGGIAQDLRTDGRRRLQFRSLSVQTGVIPQANGSARVRLGATDIIASV 60
Query: 193 KAEIGKPSHLHPNKGKVAISVDCSAIATPVFEGRGGEELSTELSVALQRCLLGGKSGAGA 372
KAE+GKPS LHP+KGKVAI VDCS A P+FEGRG EELS ELSV+LQRCLLGGKSGAGA
Sbjct: 61 KAELGKPSILHPDKGKVAIFVDCSPTAEPLFEGRGSEELSAELSVSLQRCLLGGKSGAGA 120
Query: 373 GIDLLSLSLMEGKICWDLYIEGLVIXXXXXXXXXXXXXIKAALSNTCIPKVNVAGEVSAE 552
IDL SL +++GK+CWDLYI+GLV+ IK ALS+T IPKVNV+ +++
Sbjct: 121 AIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAVAIKVALSDTGIPKVNVSVSAASD 180
Query: 553 EQPEVDISDEDFLRFDTSSVPVIVTLTKVGRHYIVDATPGEESHMSSAVSVSINNRGQIC 732
E+PEVD+SDE+FL+FDTS VPVI+TLTKVGRHYIVDAT EES MSSAVSVS+N GQIC
Sbjct: 181 EEPEVDVSDEEFLQFDTSGVPVIITLTKVGRHYIVDATSEEESQMSSAVSVSVNRHGQIC 240
Query: 733 GLTKRGG 753
GLTKRGG
Sbjct: 241 GLTKRGG 247