BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00006867
         (1920 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   508   e-141
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   506   e-140
ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun...   501   e-139
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   500   e-139
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   498   e-138
ref|XP_007009964.1| Pseudouridine synthase family protein isofor...   489   e-135
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   488   e-135
ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   483   e-133
ref|XP_007009963.1| Pseudouridine synthase family protein isofor...   482   e-133
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   481   e-133
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   480   e-132
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   479   e-132
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   477   e-132
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   475   e-131
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   473   e-130
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   473   e-130
gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus...   472   e-130
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              471   e-130
ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine...   460   e-126
ref|XP_007143753.1| hypothetical protein PHAVU_007G098900g [Phas...   455   e-125

>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
            gi|550332354|gb|EEE89362.2| hypothetical protein
            POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  508 bits (1307), Expect = e-141
 Identities = 257/396 (64%), Positives = 293/396 (73%)
 Frame = +1

Query: 187  ASMALSWIHISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXXXXXFGSATKETL 366
            AS++   +H   + F KP+L +   ++R   +                     +   +  
Sbjct: 3    ASLSTLHLHHQLTFFRKPSLSLLNKSIRPTRITASLEFNITFAPPKPKPKLPANLQTDAA 62

Query: 367  KPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXX 546
                    L +PWIVRGE+G++K+QS PPAR +HA+A+A   T                 
Sbjct: 63   SLSLPPGQLFIPWIVRGEDGNLKLQSNPPARLIHAIADAK--TQPKKKKDKVKKESSGNV 120

Query: 547  XXXLSSEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVC 726
               L +EP RSKAARRFYN+NFR+ AQRLSKVLAAAGVASRRSSE LIFEG+VTVNG VC
Sbjct: 121  KAKLEAEPTRSKAARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVC 180

Query: 727  NTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLM 906
            NTPQTRVDP RD IYVNGNR+ KKLPPK+Y+ALNKPKGYICS GEKESKSV+ L DDY  
Sbjct: 181  NTPQTRVDPGRDAIYVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQ 240

Query: 907  GWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSIS 1086
             WDK NPG PKPRLFTVGRLDVATTGLIIVTNDGDFAQ+I+HPSSNLSKEYIA VDG +S
Sbjct: 241  SWDKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVS 300

Query: 1087 KRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKL 1266
            KRHL A+SEGTVIEGV C PD VELLPQQPD  RPRLRIVVHEGRNHEVRELVKNAGL++
Sbjct: 301  KRHLFAVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVRELVKNAGLEI 360

Query: 1267 HSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            HSLKR RIGG+RLPSDLG GKH ELK T+LK+LGWK
Sbjct: 361  HSLKRVRIGGFRLPSDLGLGKHAELKQTDLKTLGWK 396


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  506 bits (1302), Expect = e-140
 Identities = 265/402 (65%), Positives = 306/402 (76%)
 Frame = +1

Query: 169  AALISTASMALSWIHISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXXXXXFGS 348
            AA ++ AS A S  H+S     +P+L   R + R I V +                   S
Sbjct: 9    AAAVAAASAAFSSFHLS-----RPSL--ARRHFRTIPVRSSISPPSTTSAEFNI-----S 56

Query: 349  ATKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXX 528
               ++  P+  + +LL+PWIVR ENG+++VQS PP R+L  MA A   +           
Sbjct: 57   FAPKSKNPKPQSETLLIPWIVRDENGNLRVQSTPPERYLQDMAKAKALSAKKKKKKEEST 116

Query: 529  XXXXXXXXXLSSEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVT 708
                     ++ EPK SKAARRFYN+NFR+  QRLSKVLAAAGVASRR+SEELIFEGRVT
Sbjct: 117  ARA------VAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVT 170

Query: 709  VNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSL 888
            VNG VCNTPQTRVDPARDMIYVNGNR+ KKLPPKVYLALNKPKGYICS GEKESKSVL L
Sbjct: 171  VNGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCL 230

Query: 889  FDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAA 1068
            FDDYL  W+K NPG PKPR+FTVGRLDVATTGLII+TNDGDFAQ++SHPSS LSKEYIA 
Sbjct: 231  FDDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIAT 290

Query: 1069 VDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVK 1248
            +DG ++KRHLIAISEGTVIEGVHCTPD VELLP QP+IS+PRLR+VVHEGRNHEVRELVK
Sbjct: 291  IDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVK 350

Query: 1249 NAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            +AGL++HSLKR RIGG+RLPSDLG GKHVELK  +LK+LGWK
Sbjct: 351  SAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALGWK 392


>ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
            gi|462414524|gb|EMJ19261.1| hypothetical protein
            PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  501 bits (1290), Expect = e-139
 Identities = 264/408 (64%), Positives = 311/408 (76%), Gaps = 8/408 (1%)
 Frame = +1

Query: 175  LISTASMALSWIHISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXXXXXFG-SA 351
            + S A+ AL+   +SSSLF+KP+L +    +R +  +TC                F  S 
Sbjct: 1    MASVAAAALA--SLSSSLFSKPSLSLIP--IRTLPRITCSLSTSSSSSSLEFNITFAPSK 56

Query: 352  TKETLKPEQA-------TNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXX 510
             K  LKP+ A          L++PWIVRGE+G++K+QS PPARFL A+            
Sbjct: 57   PKPKLKPDSAEPDPEALAGQLIIPWIVRGEDGNLKLQSHPPARFLQAIETKSKTKKKKEG 116

Query: 511  XXXXXXXXXXXXXXXLSSEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELI 690
                            ++EPK SKAARRFYN+NFR+++QRLSKVLAAAGVASRRSSE+LI
Sbjct: 117  AEKRVP----------TAEPKYSKAARRFYNENFRDASQRLSKVLAAAGVASRRSSEQLI 166

Query: 691  FEGRVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKES 870
            F+G+VTVNG VCNTPQ+RVDP RD+IYVNGNR+ K+LPPKVYLALNKPKGYIC+ GE  +
Sbjct: 167  FDGKVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRLPPKVYLALNKPKGYICASGE--N 224

Query: 871  KSVLSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLS 1050
            KSVLSLF+DYL  WDK N G P+PRLFTVGRLDVATTGLIIVTNDGDFAQ+ISHPSSNLS
Sbjct: 225  KSVLSLFEDYLKTWDKRNSGIPRPRLFTVGRLDVATTGLIIVTNDGDFAQKISHPSSNLS 284

Query: 1051 KEYIAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHE 1230
            KEYIAA++G +SKRHL+AISEGTVIEGVHCTPD VELLPQQPD+SRPRLRIVVHEGRNHE
Sbjct: 285  KEYIAAIEGVVSKRHLLAISEGTVIEGVHCTPDSVELLPQQPDMSRPRLRIVVHEGRNHE 344

Query: 1231 VRELVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            VRELVKNAGL++HSLKR RIGG+RLPSDLG GKH+ LK  +L +LGWK
Sbjct: 345  VRELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHMALKQGDLSALGWK 392


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
            gi|557538690|gb|ESR49734.1| hypothetical protein
            CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  500 bits (1288), Expect = e-139
 Identities = 259/409 (63%), Positives = 304/409 (74%), Gaps = 1/409 (0%)
 Frame = +1

Query: 151  NQQKHFAALISTASMALSWIHISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXX 330
            +QQ+  A++ + A  A++   + SS F  P+L + RT  R  S +TC             
Sbjct: 46   SQQEEMASVATAA--AITTTTLFSSFFRNPSLCIHRTFPR--SRITCSSSSLQFNISFAP 101

Query: 331  XXXFGSATKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXX 510
                 +   +    E +   L +PWIVRGE+G++K+Q+ PPAR +H +A+A    +    
Sbjct: 102  PKRKKTQQDDFESGEGSEQQLFIPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNK 161

Query: 511  XXXXXXXXXXXXXXX-LSSEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEEL 687
                              + PK SKAARRFYN NFR++ +RLSKVLAAAGVASRRSSEEL
Sbjct: 162  KKNDTSAAAAAAAAGGPKAAPKLSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEEL 221

Query: 688  IFEGRVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKE 867
            IF+G+VTVNG VCNTPQTRVDPARD+IYVNG R+ KKLPPKVYLALNKPKGYICS GEKE
Sbjct: 222  IFQGQVTVNGSVCNTPQTRVDPARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKE 281

Query: 868  SKSVLSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNL 1047
             KSV+SLFDDYL  WDK NPG P+PRLFTVGRLDVATTGLIIVTNDGDFAQ +SHPSS L
Sbjct: 282  VKSVMSLFDDYLKSWDKRNPGLPRPRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKL 341

Query: 1048 SKEYIAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNH 1227
             KEYIA +DG+++KRHLIAISEGTVIEG HCTPD VELLP QPDI RPR+RIVVHEGRNH
Sbjct: 342  QKEYIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNH 401

Query: 1228 EVRELVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            EVRELVKNAGLKL+SLKR RIGG+RLPSDLG G HVELK ++LK +GWK
Sbjct: 402  EVRELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVELKQSDLKLMGWK 450


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  498 bits (1283), Expect = e-138
 Identities = 258/402 (64%), Positives = 301/402 (74%), Gaps = 1/402 (0%)
 Frame = +1

Query: 172  ALISTASMALSWIHISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXXXXXFGSA 351
            A ++TA+ A++   + SS F  P+L + RT  R  S +TC                  + 
Sbjct: 2    ASVATAA-AITTTTLFSSFFRNPSLCIHRTFPR--SRITCSSSSLQFNISFAPPKRKKTQ 58

Query: 352  TKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXX 531
              +    E +   L +PWIVRGE+G++K+Q+ PPAR +H +A+A    +           
Sbjct: 59   QDDFESGEGSEQQLFIPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSA 118

Query: 532  XXXXXXXX-LSSEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVT 708
                       + PK SKAARRFYN NFR++ +RLSKVLAAAGVASRRSSEELIF+G+VT
Sbjct: 119  AAAAAAAGGPKAAPKLSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVT 178

Query: 709  VNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSL 888
            VNG VCNTPQTRVDPARD+IYVNG R+ KKLPPKVYLALNKPKGYICS GEKE KSV+SL
Sbjct: 179  VNGSVCNTPQTRVDPARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSL 238

Query: 889  FDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAA 1068
            FDDYL  WDK NPG P+PRLFTVGRLDVATTGLIIVTNDGDFAQ +SHPSS L KEYIA 
Sbjct: 239  FDDYLKSWDKRNPGLPRPRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKLQKEYIAT 298

Query: 1069 VDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVK 1248
            +DG+++KRHLIAISEGTVIEG HCTPD VELLP QPDI RPR+RIVVHEGRNHEVRELVK
Sbjct: 299  IDGAVNKRHLIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVRELVK 358

Query: 1249 NAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            NAGLKL+SLKR RIGG+RLPSDLG G HVELK ++LK +GWK
Sbjct: 359  NAGLKLYSLKRLRIGGFRLPSDLGIGMHVELKQSDLKLMGWK 400


>ref|XP_007009964.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
            cacao] gi|508726877|gb|EOY18774.1| Pseudouridine synthase
            family protein isoform 2, partial [Theobroma cacao]
          Length = 398

 Score =  489 bits (1258), Expect = e-135
 Identities = 239/336 (71%), Positives = 276/336 (82%), Gaps = 1/336 (0%)
 Frame = +1

Query: 370  PEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXX 549
            P  +   L +PWIVRGE+G++K+Q+ PPAR +HA+A+A                      
Sbjct: 62   PLPSNGQLFIPWIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAV 121

Query: 550  XXLSSEP-KRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVC 726
               S EP K SKAARRFYN+NF    QRLSKVLAAAGVASRR SEELIF+G+VTVNG VC
Sbjct: 122  GNASVEPPKLSKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVC 181

Query: 727  NTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLM 906
            N PQTRVDPA+D+IYVNG+R+ KKLPPK+YLALNKPKGYICS GEKE KSVL LF+DYL 
Sbjct: 182  NAPQTRVDPAKDIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLK 241

Query: 907  GWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSIS 1086
             WDK+N G PKPRLFTVGRLDVATTGLIIVTNDGDFAQ++SHPSSNL+KEYIA +DG + 
Sbjct: 242  RWDKMNRGSPKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVK 301

Query: 1087 KRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKL 1266
            KRHLIAISEGT IEG+HC PD VELLP+QPD+SRPRLRIVVHEGRNHEVRELVKNAGL++
Sbjct: 302  KRHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEI 361

Query: 1267 HSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            HSLKR RIGG+RLP+DLG GKHVELK ++L+++GWK
Sbjct: 362  HSLKRVRIGGFRLPADLGLGKHVELKQSDLRAMGWK 397


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  488 bits (1255), Expect = e-135
 Identities = 244/328 (74%), Positives = 277/328 (84%)
 Frame = +1

Query: 391  LLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXXXXLSSEP 570
            L +PWIVRGE+G++K+QS PP RFLH+++   D T                    ++  P
Sbjct: 80   LFIPWIVRGEDGNLKLQSHPPTRFLHSVSE--DETKPKKKKVSAGKP--------ITEPP 129

Query: 571  KRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVCNTPQTRVD 750
            K SKAARRFYN+N R S+QRLSKVLAAAGVASRRSSEELIF GRVTVNG VCNTPQTRVD
Sbjct: 130  KHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVD 189

Query: 751  PARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLMGWDKINPG 930
            PARD+IYVNGNR+ KKLPPKVYLALNKPKGYICS G+KESKSV+SLFDDYL  WDK  PG
Sbjct: 190  PARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPG 249

Query: 931  FPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSISKRHLIAIS 1110
             PKPRLFTVGRLDVATTGLIIVTNDGDFAQ ISHPSS LSKEYIAA+DG++SK++LIAIS
Sbjct: 250  QPKPRLFTVGRLDVATTGLIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTVSKQNLIAIS 309

Query: 1111 EGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRI 1290
            EGT+I+GVHCTPD VELLP+QPDIS+ RLRIVVHEGRNHEVRELVK AGL+++SLKR RI
Sbjct: 310  EGTIIDGVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRI 369

Query: 1291 GGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            GG+RLPSDLG G + ELK +ELK++GWK
Sbjct: 370  GGFRLPSDLGLGSYTELKQSELKAIGWK 397


>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Solanum lycopersicum]
          Length = 414

 Score =  483 bits (1243), Expect = e-133
 Identities = 240/330 (72%), Positives = 269/330 (81%)
 Frame = +1

Query: 385  NSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXXXXLSS 564
            + L +PWIVR E G++ +QS PPAR LH MANA                         + 
Sbjct: 88   DQLYIPWIVRDEKGNLTLQSTPPARLLHEMANASTGKKKKKGKEVASKAATVVP----TP 143

Query: 565  EPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVCNTPQTR 744
            EPK SKAARRFYN+NFR+  QRLSKVLAAAGVASRRSSEELIF+GRVTVNG VC TPQT+
Sbjct: 144  EPKHSKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTK 203

Query: 745  VDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLMGWDKIN 924
            VDPARD+IYVNGNR+ KKLP KVYLALNKPKGYICS GEKE+KSV+SLFDD++  WDK +
Sbjct: 204  VDPARDVIYVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSWDKRH 263

Query: 925  PGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSISKRHLIA 1104
            PG PKPRLFTVGRLDVATTGLIIVTNDG+F  +ISHPSSNLSKEYIA +DG + KRHLIA
Sbjct: 264  PGQPKPRLFTVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKRHLIA 323

Query: 1105 ISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRT 1284
            ISEGT+I+GVHCTPD VELLP QPD+SRPRLRIVVHEGRNHEVRELVKNAGL+L +LKR 
Sbjct: 324  ISEGTIIDGVHCTPDNVELLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRI 383

Query: 1285 RIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            RIGG+RLP+DL  GKHVEL    LK+LGWK
Sbjct: 384  RIGGFRLPADLALGKHVELNQANLKALGWK 413


>ref|XP_007009963.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508726876|gb|EOY18773.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  482 bits (1241), Expect = e-133
 Identities = 239/342 (69%), Positives = 276/342 (80%), Gaps = 7/342 (2%)
 Frame = +1

Query: 370  PEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXX 549
            P  +   L +PWIVRGE+G++K+Q+ PPAR +HA+A+A                      
Sbjct: 111  PLPSNGQLFIPWIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAV 170

Query: 550  XXLSSEP-KRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVC 726
               S EP K SKAARRFYN+NF    QRLSKVLAAAGVASRR SEELIF+G+VTVNG VC
Sbjct: 171  GNASVEPPKLSKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVC 230

Query: 727  NTPQ------TRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSL 888
            N PQ      TRVDPA+D+IYVNG+R+ KKLPPK+YLALNKPKGYICS GEKE KSVL L
Sbjct: 231  NAPQASDNLQTRVDPAKDIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDL 290

Query: 889  FDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAA 1068
            F+DYL  WDK+N G PKPRLFTVGRLDVATTGLIIVTNDGDFAQ++SHPSSNL+KEYIA 
Sbjct: 291  FEDYLKRWDKMNRGSPKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIAT 350

Query: 1069 VDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVK 1248
            +DG + KRHLIAISEGT IEG+HC PD VELLP+QPD+SRPRLRIVVHEGRNHEVRELVK
Sbjct: 351  IDGEVKKRHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVK 410

Query: 1249 NAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            NAGL++HSLKR RIGG+RLP+DLG GKHVELK ++L+++GWK
Sbjct: 411  NAGLEIHSLKRVRIGGFRLPADLGLGKHVELKQSDLRAMGWK 452


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  481 bits (1239), Expect = e-133
 Identities = 240/330 (72%), Positives = 269/330 (81%)
 Frame = +1

Query: 385  NSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXXXXLSS 564
            + L +PWIVR E G++ +QS PPAR LH MANA  +                      + 
Sbjct: 87   DQLYIPWIVRDEKGNLTLQSTPPARLLHEMANASTSKKKKKGKEVASKAATVVP----TP 142

Query: 565  EPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVCNTPQTR 744
            EPK SKAARRFYN+NFR+  QRLSKVLAAAGVASRRSSEELIF+GRVTVNG VC TPQT+
Sbjct: 143  EPKHSKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTK 202

Query: 745  VDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLMGWDKIN 924
            VDPARD+IYVNGNR+ KKLP KVYLALNKPKGYICS GEKE+KSV+SLFDD++  WDK +
Sbjct: 203  VDPARDVIYVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSWDKRH 262

Query: 925  PGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSISKRHLIA 1104
            PG PKPRLFTVGRLDVATTGLIIVTNDG+F  +ISHPSSNLSKEYIA +DG + KRHLIA
Sbjct: 263  PGQPKPRLFTVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKRHLIA 322

Query: 1105 ISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRT 1284
            ISEGTVI+GVHC PD VELLP QPD+SRPRLRIVVHEGRNHEVRELVKNAGL+L +LKR 
Sbjct: 323  ISEGTVIDGVHCIPDNVELLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRI 382

Query: 1285 RIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            RIGG+RLP+DL  GKHVEL    LK+LGWK
Sbjct: 383  RIGGFRLPADLALGKHVELNQANLKALGWK 412


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  480 bits (1235), Expect = e-132
 Identities = 252/387 (65%), Positives = 289/387 (74%)
 Frame = +1

Query: 214  ISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXXXXXFGSATKETLKPEQATNSL 393
            + SSLF K +L +  T  R +  LTC                             +   L
Sbjct: 11   LPSSLFFKRSLSL--TPFRTLPRLTCSSSLEFNITFAPAPKPKPDPNSLPASSSSSGQQL 68

Query: 394  LVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXXXXLSSEPK 573
             +PWIVRGE+G +K+QS PPAR LH MA A   T                    L++EPK
Sbjct: 69   FIPWIVRGEDGKLKLQSHPPARLLHEMAQADTKTKSKKNKDTAQKKQRV-----LTAEPK 123

Query: 574  RSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVCNTPQTRVDP 753
             SKAARRFYN+NFR S QRLSKVLAAAGVASRRSSE+LIF+G+VTVNG VCNTPQT VDP
Sbjct: 124  HSKAARRFYNENFRES-QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQTPVDP 182

Query: 754  ARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLMGWDKINPGF 933
             RD+IYVNGNR+ KKLPPKVYLALNKPKGYIC+ GEK  KSVLSLFDDYL  WDK NPG 
Sbjct: 183  GRDIIYVNGNRLPKKLPPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSWDKRNPGT 240

Query: 934  PKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSISKRHLIAISE 1113
            P+PRLFTVGRLDVATTGLI+VTNDGDFAQ ISHPS+NL+KEYIA ++GS+SK+ LIAISE
Sbjct: 241  PRPRLFTVGRLDVATTGLIVVTNDGDFAQSISHPSANLTKEYIAVIEGSVSKKSLIAISE 300

Query: 1114 GTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIG 1293
            GTVI+GVHCTPD VELLPQQP+ISR RLRIVVHEGRNHEVRELVK AGL++HSLKR RIG
Sbjct: 301  GTVIDGVHCTPDSVELLPQQPEISRSRLRIVVHEGRNHEVRELVKKAGLEIHSLKRVRIG 360

Query: 1294 GYRLPSDLGFGKHVELKHTELKSLGWK 1374
            G+RLP++LG G H+EL+  +L +LGWK
Sbjct: 361  GFRLPTNLGLGTHMELRQGDLSALGWK 387


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  479 bits (1232), Expect = e-132
 Identities = 236/330 (71%), Positives = 272/330 (82%)
 Frame = +1

Query: 385  NSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXXXXLSS 564
            + L +PWI+RG++G++K+QS PPAR LHAMA+A                          +
Sbjct: 76   SQLFIPWIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKKPTAAEKKKKNDKADKSVA 135

Query: 565  EPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVCNTPQTR 744
            EPK SKAARRFYN+NFR S QRLSKVLAAAGVASRR+SEELI EGRVTVNG VCNTPQTR
Sbjct: 136  EPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRVTVNGSVCNTPQTR 195

Query: 745  VDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLMGWDKIN 924
            VDPA+D+IYVNGNR+ K+LPPKVYLALNKPKGYICS G+K  KSV+SLFDDYL  WDK N
Sbjct: 196  VDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMSLFDDYLKIWDKRN 253

Query: 925  PGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSISKRHLIA 1104
             G  KPRLFTVGRLDVATTGLIIVTNDGDFAQ++SHPSSNLSKEYIA ++G++SK+HL+ 
Sbjct: 254  LGQSKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIATIEGTVSKKHLLV 313

Query: 1105 ISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRT 1284
            ISEGT I+GVHC PD VELLP QP++ RPRLR+VVH+GR HEVREL+KNAGL++HSLKR 
Sbjct: 314  ISEGTFIDGVHCVPDSVELLPNQPEMPRPRLRVVVHDGRKHEVRELMKNAGLEIHSLKRV 373

Query: 1285 RIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            RIGGYRLPSDLG GKHVELK  +L +LGWK
Sbjct: 374  RIGGYRLPSDLGLGKHVELKQGDLSALGWK 403


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  477 bits (1227), Expect = e-132
 Identities = 242/357 (67%), Positives = 280/357 (78%), Gaps = 14/357 (3%)
 Frame = +1

Query: 346  SATKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXX 525
            S+T+    P+Q    L +PWIVRG++G +K+QS PPAR +H +A  +DAT          
Sbjct: 61   SSTRGGATPQQ----LFIPWIVRGDDGTLKLQSQPPARLIHNLA--IDATTQNPKKKDKP 114

Query: 526  XXXXXXXXXXLSS--------------EPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVA 663
                       +S              +PK SKAARRFYN+NF+   QRLSKVLAAAGVA
Sbjct: 115  KKKQPQATSSSASATASASSPASHSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVA 174

Query: 664  SRRSSEELIFEGRVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGY 843
            SRR+SEELIF+G+VTVNG +CNTPQTRVDP+RD+IYVNGNRI KKLPPKVY ALNKPKGY
Sbjct: 175  SRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGY 234

Query: 844  ICSCGEKESKSVLSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQR 1023
            ICS GEKE KSV+SLFD+YL  WDK NPG PKPRLFTVGRLDVATTGLI+VTNDGDFAQ+
Sbjct: 235  ICSSGEKEIKSVISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQK 294

Query: 1024 ISHPSSNLSKEYIAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRI 1203
            +SHPSS+L KEYI  V G I KRHL+AISEGT++EGVHC PD VEL+P+Q DI R RLRI
Sbjct: 295  LSHPSSSLPKEYITTVVGDIHKRHLMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRI 354

Query: 1204 VVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            VVHEGRNHEVRELVKNAGL++HSLKR RIGG+RLPSDLG GKHVELK +ELK++GWK
Sbjct: 355  VVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMGWK 411


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
            gi|557112308|gb|ESQ52592.1| hypothetical protein
            EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  475 bits (1222), Expect = e-131
 Identities = 235/345 (68%), Positives = 271/345 (78%), Gaps = 4/345 (1%)
 Frame = +1

Query: 352  TKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXX 531
            T  + +       L +PWIVRGE+G +KVQS PPAR +HA+A+A                
Sbjct: 58   TPSSTRGGAGVQQLFIPWIVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKP 117

Query: 532  XXXXXXXXLS----SEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEG 699
                     S    S+PK SKAARRFYN+NF++  QRLSKVLAAAGVASRR+SEELIF+G
Sbjct: 118  QSTSASTPSSPASHSKPKLSKAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDG 177

Query: 700  RVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSV 879
            +VTVNG +C  PQ RVDP RD+IYVNGNRI KKLPPKVY ALNKPKGYICS GEKE KSV
Sbjct: 178  KVTVNGSLCTAPQIRVDPTRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSV 237

Query: 880  LSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEY 1059
            +SLFDD+L  WDK NPG PKPRLFTVGRLDVATTGLI+VTNDGDFAQ++SHPSS+L KEY
Sbjct: 238  ISLFDDFLASWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEY 297

Query: 1060 IAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRE 1239
            I  V G + KRHL+ ISEGT++EGVHC PD VEL+P+Q DI R RLRIVVHEGRNHEVRE
Sbjct: 298  ITTVVGDVHKRHLMTISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRE 357

Query: 1240 LVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            +VKNAGL++HSLKR RIGG+RLPSDLG GKHVELK +ELK++GWK
Sbjct: 358  IVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMGWK 402


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
            gi|482562896|gb|EOA27086.1| hypothetical protein
            CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  473 bits (1218), Expect = e-130
 Identities = 241/357 (67%), Positives = 278/357 (77%), Gaps = 14/357 (3%)
 Frame = +1

Query: 346  SATKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXX 525
            ++T+  + P+Q    L +PWIVRG++G +K+QS PPAR +H++A  +DAT          
Sbjct: 105  ASTRGGVSPQQ----LFIPWIVRGDDGTLKLQSQPPARLIHSLA--IDATTQNPKKKEKS 158

Query: 526  XXXXXXXXXXLS--------------SEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVA 663
                       +              S PK SKAARRFYN+NF+   QRLSKVLAAAGVA
Sbjct: 159  KKKQTQATSSSATASSSASASSPPPQSVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVA 218

Query: 664  SRRSSEELIFEGRVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGY 843
            SRR+SEELIF+G+VTVNG +CNTPQTRVDP+RD+IYVNGNRI KKLPPKVY ALNKPKGY
Sbjct: 219  SRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGY 278

Query: 844  ICSCGEKESKSVLSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQR 1023
            ICS GEKE KSV+SLFD+Y+  WDK NPG PKPRLFTVGRLDVATTGLIIVTNDGDFAQ+
Sbjct: 279  ICSSGEKEVKSVISLFDEYMASWDKRNPGTPKPRLFTVGRLDVATTGLIIVTNDGDFAQQ 338

Query: 1024 ISHPSSNLSKEYIAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRI 1203
            +SHPSS+L KEYI  V G I KRHL+AISEGT++EGVHC PD VEL+P+Q DI R RLRI
Sbjct: 339  LSHPSSSLPKEYITTVVGDIHKRHLMAISEGTIVEGVHCVPDLVELMPKQHDIPRARLRI 398

Query: 1204 VVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            VVHEGRNHEVRELVKNAGL +HSLKR RIGG+RLPSDLG GKH ELK +ELK LGWK
Sbjct: 399  VVHEGRNHEVRELVKNAGLVVHSLKRVRIGGFRLPSDLGLGKHAELKQSELKVLGWK 455


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
            gi|21617894|gb|AAM66944.1| unknown [Arabidopsis thaliana]
            gi|26450440|dbj|BAC42334.1| unknown protein [Arabidopsis
            thaliana] gi|330254545|gb|AEC09639.1| pseudouridine
            synthase family protein [Arabidopsis thaliana]
          Length = 410

 Score =  473 bits (1218), Expect = e-130
 Identities = 241/356 (67%), Positives = 278/356 (78%), Gaps = 13/356 (3%)
 Frame = +1

Query: 346  SATKETLKPEQATNSLLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXX 525
            S+T   + P+Q    L +PWIVR ++G +K+QS PPAR +H +  A+DAT          
Sbjct: 60   SSTHGGVTPQQ----LFIPWIVRSDDGTLKLQSQPPARLIHNL--AIDATTQNPKKKDKS 113

Query: 526  XXXXXXXXXXLSS-------------EPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVAS 666
                       S+             +PK SKAARRFYN+NF+   QRLSKVLAAAGVAS
Sbjct: 114  KKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVAS 173

Query: 667  RRSSEELIFEGRVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYI 846
            RR+SEELIF+G+VTVNG +CNTPQTRVDP+RD+IYVNGNRI KKLPPKVY ALNKPKGYI
Sbjct: 174  RRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYI 233

Query: 847  CSCGEKESKSVLSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRI 1026
            CS GEKE KS +SLFD+YL  WDK NPG PKPRLFTVGRLDVATTGLI+VTNDGDFAQ++
Sbjct: 234  CSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKL 293

Query: 1027 SHPSSNLSKEYIAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIV 1206
            SHPSS+L KEYI  V G I KRHL+AISEGT++EGVHC PD VEL+P+Q DI R RLRIV
Sbjct: 294  SHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIV 353

Query: 1207 VHEGRNHEVRELVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            VHEGRNHEVRELVKNAGL++HSLKR RIGG+RLPSDLG GKHVELK +ELK+LGWK
Sbjct: 354  VHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGWK 409


>gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus guttatus]
          Length = 409

 Score =  472 bits (1214), Expect = e-130
 Identities = 248/408 (60%), Positives = 294/408 (72%), Gaps = 9/408 (2%)
 Frame = +1

Query: 172  ALISTASMALSWIHISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXXXXXFGSA 351
            A I+ A+ A + +H+S + F  P     R + R  +V+T                 F   
Sbjct: 2    AAIAAAATAFTTLHLSKTSFILP-----RRHFR--TVITSSLSTTTTTAAAEFKITFAPP 54

Query: 352  T-KETLKPEQATNS--------LLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXX 504
              K  L+    TN+        LLVPWI+R ENG++ +Q  PP RFL AMAN        
Sbjct: 55   KPKPQLQKSDPTNAPGIDSGDQLLVPWILRDENGNISLQKMPPQRFLKAMANESTQKKKK 114

Query: 505  XXXXXXXXXXXXXXXXXLSSEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEE 684
                                EPK SKAARRFYN+ FR   QRL+KVLA AGVASRRSSEE
Sbjct: 115  RDDKTPAKKAKAAMQYV---EPKYSKAARRFYNERFREPPQRLAKVLATAGVASRRSSEE 171

Query: 685  LIFEGRVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEK 864
            LIF+G+VTVNG VCNTPQTRVDPARD+IYVNG+R++KKLPPKVYLALNKPKGYICS GE+
Sbjct: 172  LIFQGKVTVNGSVCNTPQTRVDPARDIIYVNGSRLAKKLPPKVYLALNKPKGYICSAGEE 231

Query: 865  ESKSVLSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSN 1044
            E+KSV SLFDD++ GWDK NPG PKPRLFTVGRLDVATTGLIIVTNDG+FA ++SHPSSN
Sbjct: 232  ETKSVFSLFDDFMKGWDKRNPGIPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSN 291

Query: 1045 LSKEYIAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRN 1224
            LSKEYIA ++G+++KR+L+ ISEGT +EGV C PD VELLPQQPDISRPRLRIVVHEGRN
Sbjct: 292  LSKEYIATINGAVTKRNLLTISEGTFVEGVKCVPDSVELLPQQPDISRPRLRIVVHEGRN 351

Query: 1225 HEVRELVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLG 1368
            HEVRELVKNAGL++H+LKR RIGG+RLPSDL  GKH+EL    +++LG
Sbjct: 352  HEVRELVKNAGLQIHALKRIRIGGFRLPSDLALGKHIELTPAHMRALG 399


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  471 bits (1211), Expect = e-130
 Identities = 229/270 (84%), Positives = 250/270 (92%)
 Frame = +1

Query: 565  EPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVCNTPQTR 744
            EPK SKAARRFYN+NFR+  QRLSKVLAAAGVASRR+SEELIFEGRVTVNG VCNTPQTR
Sbjct: 26   EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85

Query: 745  VDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLMGWDKIN 924
            VDPARDMIYVNGNR+ KKLPPKVYLALNKPKGYICS GEKESKSVL LFDDYL  W+K N
Sbjct: 86   VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145

Query: 925  PGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSISKRHLIA 1104
            PG PKPR+FTVGRLDVATTGLII+TNDGDFAQ++SHPSS LSKEYIA +DG ++KRHLIA
Sbjct: 146  PGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIA 205

Query: 1105 ISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRT 1284
            ISEGTVIEGVHCTPD VELLP QP+IS+PRLR+VVHEGRNHEVRELVK+AGL++HSLKR 
Sbjct: 206  ISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRI 265

Query: 1285 RIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            RIGG+RLPSDLG GKHVELK  +LK+LGWK
Sbjct: 266  RIGGFRLPSDLGHGKHVELKQGDLKALGWK 295


>ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cicer arietinum]
          Length = 410

 Score =  460 bits (1183), Expect = e-126
 Identities = 246/412 (59%), Positives = 292/412 (70%), Gaps = 13/412 (3%)
 Frame = +1

Query: 181  STASMALSWIHISSSLFTKPNLLVCRTNLRRISVLTCXXXXXXXXXXXXXXXXFGSATKE 360
            S A+M+++   +++  FTK N L   ++ R +   TC                  S  K 
Sbjct: 3    SAATMSMA---MTALCFTKSNKLT--SSFRTLPRFTCSSSPFKFNISFSP-----SKPKP 52

Query: 361  TLKPEQATNS-----------LLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXX 507
              KPE  T S           L++PWIVRGE+G+ K+ S PP  FL AMAN    T    
Sbjct: 53   NPKPEPQTESPNQFPDDNEGQLIIPWIVRGEDGNFKLLSEPPPSFLKAMANDKTGTKKSD 112

Query: 508  XXXXXXXXXXXXXXXXL--SSEPKRSKAARRFYNQNFRNSAQRLSKVLAAAGVASRRSSE 681
                            +  ++ P+ SKAARRFYN+NF++S  RLSKVLAA+GVASRRS E
Sbjct: 113  KNQTTKNKKKSENETKVRATAPPQYSKAARRFYNENFKDSGTRLSKVLAASGVASRRSCE 172

Query: 682  ELIFEGRVTVNGCVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGE 861
            +LIFEG+VTVNG VCNTPQTRVDPA+D+IYVNG+R+ K+ P KVYLALNKPKGYICS GE
Sbjct: 173  DLIFEGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKRQPHKVYLALNKPKGYICSSGE 232

Query: 862  KESKSVLSLFDDYLMGWDKINPGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSS 1041
            KESKSVLSLFDD+L  WDK +PG P PRLFTVGRLDVATTGL+IVTNDGDFAQR+SHPSS
Sbjct: 233  KESKSVLSLFDDFLSSWDKKHPGVPMPRLFTVGRLDVATTGLLIVTNDGDFAQRLSHPSS 292

Query: 1042 NLSKEYIAAVDGSISKRHLIAISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGR 1221
            N SKEYIA V+G + KRHL AISEGT IEGVHC PD VELLP  PD  R RLRIVVH+GR
Sbjct: 293  NFSKEYIATVNGLVHKRHLTAISEGTTIEGVHCVPDSVELLPSMPDAQRARLRIVVHDGR 352

Query: 1222 NHEVRELVKNAGLKLHSLKRTRIGGYRLPSDLGFGKHVELKHTELKSLGWKI 1377
             HEVRELVKNAGL++HSLKR RIGG+RLP DLG GK++EL  T+LK+LG ++
Sbjct: 353  KHEVRELVKNAGLEIHSLKRVRIGGFRLPPDLGLGKYIELNPTKLKALGGRV 404


>ref|XP_007143753.1| hypothetical protein PHAVU_007G098900g [Phaseolus vulgaris]
            gi|561016943|gb|ESW15747.1| hypothetical protein
            PHAVU_007G098900g [Phaseolus vulgaris]
          Length = 403

 Score =  455 bits (1170), Expect = e-125
 Identities = 229/330 (69%), Positives = 263/330 (79%), Gaps = 2/330 (0%)
 Frame = +1

Query: 391  LLVPWIVRGENGDVKVQSGPPARFLHAMANAMDATMXXXXXXXXXXXXXXXXXXX-LSSE 567
            LL+PWIVRGE+G++K+QS PP   L+A+A A   T                      ++ 
Sbjct: 73   LLIPWIVRGEDGNLKLQSEPPPSLLNAIATAQTGTRKDSNQKTKTTAATTKPQKIRATAP 132

Query: 568  PKRSKAARRFYNQNFRNSA-QRLSKVLAAAGVASRRSSEELIFEGRVTVNGCVCNTPQTR 744
            P+ SKAARRFYNQN + S+  RLSKVLAA+GVASRRS EELIFEG+VTVNG VCNTPQTR
Sbjct: 133  PQHSKAARRFYNQNIKESSGARLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTR 192

Query: 745  VDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSCGEKESKSVLSLFDDYLMGWDKIN 924
            VDPA+D+IYVNGNR+ K+ P KVYLALNKPKGYICS GE ESKSV+SLFDD+L  W K  
Sbjct: 193  VDPAKDVIYVNGNRLPKRQPQKVYLALNKPKGYICSSGENESKSVISLFDDFLNTWGKKR 252

Query: 925  PGFPKPRLFTVGRLDVATTGLIIVTNDGDFAQRISHPSSNLSKEYIAAVDGSISKRHLIA 1104
            PG P PRLFTVGRLDVATTGLIIVTNDGDFAQ++SHPSSNLSKEYIA VDG + KRHL+A
Sbjct: 253  PGVPTPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIATVDGLVYKRHLMA 312

Query: 1105 ISEGTVIEGVHCTPDYVELLPQQPDISRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRT 1284
            ISEGT IEGVHC PD VE+LP+Q D+ R R+RIVVHEGR HEVRELVKNAGL++HSLKR 
Sbjct: 313  ISEGTTIEGVHCVPDAVEILPRQADMQRARIRIVVHEGRKHEVRELVKNAGLEIHSLKRI 372

Query: 1285 RIGGYRLPSDLGFGKHVELKHTELKSLGWK 1374
            RIGG+RLP DLG GK++EL  T L +LGWK
Sbjct: 373  RIGGFRLPPDLGLGKYIELNPTNLNALGWK 402