BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00006692
         (210 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...    94   3e-17
ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocar...    94   3e-17
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts...    92   7e-17
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts...    92   7e-17
gb|ABP01544.1| UPF3, partial [Nicotiana attenuata]                     92   1e-16
ref|XP_007148572.1| hypothetical protein PHAVU_006G219800g [Phas...    91   1e-16
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...    91   1e-16
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts...    91   2e-16
ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts...    91   2e-16
ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts...    90   4e-16
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...    90   4e-16
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...    90   4e-16
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts...    89   5e-16
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A...    89   5e-16
ref|XP_007041201.1| Smg-4/UPF3 family protein, putative isoform ...    89   6e-16
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ...    89   6e-16
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...    89   8e-16
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263...    89   8e-16
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264...    89   8e-16
emb|CBI29694.3| unnamed protein product [Vitis vinifera]               89   8e-16

>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
           gi|550341819|gb|ERP62848.1| hypothetical protein
           POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLEL+AKPVENLPSA+IQL+R+EAER         GAAK+ PIVTPLMDFVRQKR AK+
Sbjct: 122 EFLELIAKPVENLPSAEIQLERREAERA--------GAAKDAPIVTPLMDFVRQKRVAKN 173

Query: 183 GPQRSSSNG 209
           GP+R  SNG
Sbjct: 174 GPRRILSNG 182


>ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocarpa]
           gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein
           [Populus trichocarpa]
          Length = 527

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLEL+AKPVENLPSA+IQL+R+EAER         GAAK+ PIVTPLMDFVRQKR AK+
Sbjct: 122 EFLELIAKPVENLPSAEIQLERREAERA--------GAAKDAPIVTPLMDFVRQKRVAKN 173

Query: 183 GPQRSSSNG 209
           GP+R  SNG
Sbjct: 174 GPRRILSNG 182


>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
           [Solanum tuberosum]
          Length = 482

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 49/69 (71%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE LAKPVENLPSA+IQL+RKEAER         G+AK+ PIVTPLMD+VRQKRA KS
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERA--------GSAKDAPIVTPLMDYVRQKRAVKS 169

Query: 183 GPQRSSSNG 209
           G +RS SNG
Sbjct: 170 GARRSISNG 178


>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X2 [Solanum tuberosum]
           gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
           nonsense transcripts UPF3-like isoform X3 [Solanum
           tuberosum]
          Length = 508

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 49/69 (71%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE LAKPVENLPSA+IQL+RKEAER         G+AK+ PIVTPLMD+VRQKRA KS
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERA--------GSAKDAPIVTPLMDYVRQKRAVKS 169

Query: 183 GPQRSSSNG 209
           G +RS SNG
Sbjct: 170 GARRSISNG 178


>gb|ABP01544.1| UPF3, partial [Nicotiana attenuata]
          Length = 168

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 48/69 (69%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE LAKPVENLPSA+IQL+RKEAER         G+AK+ PIVTPLMD++RQKRAAK 
Sbjct: 21  EFLEFLAKPVENLPSAEIQLERKEAERA--------GSAKDAPIVTPLMDYIRQKRAAKG 72

Query: 183 GPQRSSSNG 209
           G +RS SNG
Sbjct: 73  GARRSISNG 81


>ref|XP_007148572.1| hypothetical protein PHAVU_006G219800g [Phaseolus vulgaris]
           gi|593696149|ref|XP_007148573.1| hypothetical protein
           PHAVU_006G219800g [Phaseolus vulgaris]
           gi|561021795|gb|ESW20566.1| hypothetical protein
           PHAVU_006G219800g [Phaseolus vulgaris]
           gi|561021796|gb|ESW20567.1| hypothetical protein
           PHAVU_006G219800g [Phaseolus vulgaris]
          Length = 513

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 50/69 (72%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLELLAKPVENLPSA+IQL+++EAER         GAAK+ PI+TPLMDFVRQKRAAK 
Sbjct: 120 EFLELLAKPVENLPSAEIQLEKREAER--------SGAAKDTPIITPLMDFVRQKRAAK- 170

Query: 183 GPQRSSSNG 209
           GP+RS SNG
Sbjct: 171 GPRRSLSNG 179


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
           gi|550312328|gb|ERP48419.1| hypothetical protein
           POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 47/69 (68%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE +AKPVENLPSA+IQL+R+EAER         G AK+ PIVTPLM+F+RQKRAAKS
Sbjct: 121 EFLEFIAKPVENLPSAEIQLERREAERA--------GVAKDAPIVTPLMEFIRQKRAAKS 172

Query: 183 GPQRSSSNG 209
           GP+R  SNG
Sbjct: 173 GPRRILSNG 181


>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
           [Cicer arietinum] gi|502076758|ref|XP_004485449.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X3 [Cicer arietinum]
           gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
           nonsense transcripts UPF3-like isoform X4 [Cicer
           arietinum]
          Length = 510

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLELLAKPVENLPSA+IQL+++EAER         GA K+ PIVTPLMDFVRQKRAAK 
Sbjct: 117 EFLELLAKPVENLPSAEIQLEKREAER--------SGAGKDVPIVTPLMDFVRQKRAAK- 167

Query: 183 GPQRSSSNG 209
           GP+R SSNG
Sbjct: 168 GPRRLSSNG 176


>ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Cicer arietinum]
          Length = 517

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLELLAKPVENLPSA+IQL+++EAER         GA K+ PIVTPLMDFVRQKRAAK 
Sbjct: 117 EFLELLAKPVENLPSAEIQLEKREAER--------SGAGKDVPIVTPLMDFVRQKRAAK- 167

Query: 183 GPQRSSSNG 209
           GP+R SSNG
Sbjct: 168 GPRRLSSNG 176


>ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Glycine max] gi|571493781|ref|XP_006592655.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X2 [Glycine max]
          Length = 514

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLELLAKPVENLPSA+IQL+++EAER         GAAK+ PI+TPLMDFVRQKRAAK 
Sbjct: 120 EFLELLAKPVENLPSAEIQLEKREAER--------SGAAKDIPIITPLMDFVRQKRAAK- 170

Query: 183 GPQRSSSNG 209
           GP+R  SNG
Sbjct: 171 GPRRPLSNG 179


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
           sinensis]
          Length = 514

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/69 (69%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE ++KPVENLPSA+IQL+R+EAER         GAAKE  IVTPLMDFVRQKRAAK+
Sbjct: 120 EFLEFISKPVENLPSAEIQLERREAERA--------GAAKEALIVTPLMDFVRQKRAAKA 171

Query: 183 GPQRSSSNG 209
           GP+R  SNG
Sbjct: 172 GPRRLLSNG 180


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
           gi|557533707|gb|ESR44825.1| hypothetical protein
           CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/69 (69%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE ++KPVENLPSA+IQL+R+EAER         GAAKE  IVTPLMDFVRQKRAAK+
Sbjct: 120 EFLEFISKPVENLPSAEIQLERREAERA--------GAAKEALIVTPLMDFVRQKRAAKA 171

Query: 183 GPQRSSSNG 209
           GP+R  SNG
Sbjct: 172 GPRRLLSNG 180


>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
           [Glycine max] gi|571524272|ref|XP_006598795.1|
           PREDICTED: regulator of nonsense transcripts UPF3-like
           isoform X2 [Glycine max]
          Length = 512

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLELLAKPVENLPSA+IQL+++EAER         GAAK+ PI+TPLMDFVRQKRAAK 
Sbjct: 120 EFLELLAKPVENLPSAEIQLEKREAER--------SGAAKDIPIITPLMDFVRQKRAAK- 170

Query: 183 GPQRSSSNG 209
           GP+R  SNG
Sbjct: 171 GPRRLLSNG 179


>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
           gi|548862693|gb|ERN20051.1| hypothetical protein
           AMTR_s00071p00188270 [Amborella trichopoda]
          Length = 599

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/69 (71%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE LAKP ENLPSA+IQL+R+EAER         GA+KE  IVTPLMDFVRQKRAAKS
Sbjct: 120 EFLEFLAKPAENLPSAEIQLERREAERA--------GASKESLIVTPLMDFVRQKRAAKS 171

Query: 183 GPQRSSSNG 209
           G  RSS+NG
Sbjct: 172 GTLRSSANG 180


>ref|XP_007041201.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
           cacao] gi|508705136|gb|EOX97032.1| Smg-4/UPF3 family
           protein, putative isoform 2, partial [Theobroma cacao]
          Length = 440

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 48/69 (69%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE L KPVENLPSA+IQL+RKEAER         G  K+ PIVTPLMDFVRQKRAAK 
Sbjct: 127 EFLECLGKPVENLPSAEIQLERKEAERA--------GVPKDTPIVTPLMDFVRQKRAAKG 178

Query: 183 GPQRSSSNG 209
           G +RS SNG
Sbjct: 179 GSRRSLSNG 187


>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
           gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 514

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 48/69 (69%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE L KPVENLPSA+IQL+RKEAER         G  K+ PIVTPLMDFVRQKRAAK 
Sbjct: 120 EFLECLGKPVENLPSAEIQLERKEAERA--------GVPKDTPIVTPLMDFVRQKRAAKG 171

Query: 183 GPQRSSSNG 209
           G +RS SNG
Sbjct: 172 GSRRSLSNG 180


>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
           tuberosum]
          Length = 483

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE ++KP+ENLPSA+IQL+RKEAER         G+AK+ PIVTPLMD++RQKRAAKS
Sbjct: 120 EFLEFISKPIENLPSAEIQLERKEAERA--------GSAKDAPIVTPLMDYIRQKRAAKS 171

Query: 183 GPQRSSSNG 209
           G ++S +NG
Sbjct: 172 GARKSIANG 180


>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
           lycopersicum]
          Length = 438

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 47/69 (68%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE LAKPVENLPSA+IQL+RKEAER         G+AK+ PIVTPLMD+VRQKRA  S
Sbjct: 118 EFLEFLAKPVENLPSAEIQLERKEAERA--------GSAKDAPIVTPLMDYVRQKRAVTS 169

Query: 183 GPQRSSSNG 209
           G ++S SNG
Sbjct: 170 GARKSISNG 178


>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
           lycopersicum]
          Length = 485

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EFLE ++KP+ENLPSA+IQL+RKEAER         G+AK+ PIVTPLMD++RQKRAAKS
Sbjct: 120 EFLEFISKPIENLPSAEIQLERKEAERA--------GSAKDAPIVTPLMDYIRQKRAAKS 171

Query: 183 GPQRSSSNG 209
           G ++S +NG
Sbjct: 172 GARKSIANG 180


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/69 (69%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   EFLELLAKPVENLPSAKIQLDRKEAERVECSFLASPGAAKEYPIVTPLMDFVRQKRAAKS 182
           EF+ELLAKPVENLPSA+IQL+R+EAER         GA K+ PIVTPLMDFVRQKRAAK 
Sbjct: 120 EFVELLAKPVENLPSAEIQLERREAERA--------GAVKDTPIVTPLMDFVRQKRAAKG 171

Query: 183 GPQRSSSNG 209
             +RS SNG
Sbjct: 172 VSRRSLSNG 180