BLASTX nr result
ID: Cocculus23_contig00006671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00006671
(541 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838303.1| hypothetical protein AMTR_s00103p00121270 [A... 84 3e-14
ref|XP_003633562.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur... 75 8e-12
emb|CBI24903.3| unnamed protein product [Vitis vinifera] 75 8e-12
emb|CAN78059.1| hypothetical protein VITISV_006092 [Vitis vinifera] 75 8e-12
sp|Q02096.1|PGLR_PERAE RecName: Full=Polygalacturonase; Short=PG... 73 5e-11
gb|AAA32914.1| polygalacturonase [Persea americana] 73 5e-11
ref|XP_003633582.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur... 70 2e-10
emb|CBI24904.3| unnamed protein product [Vitis vinifera] 70 2e-10
ref|XP_002274775.1| PREDICTED: polygalacturonase-like [Vitis vin... 69 6e-10
emb|CBI24900.3| unnamed protein product [Vitis vinifera] 68 1e-09
ref|XP_002313308.2| hypothetical protein POPTR_0009s06520g, part... 62 9e-08
ref|XP_002529616.1| Polygalacturonase precursor, putative [Ricin... 60 3e-07
ref|XP_007028788.1| Pectin lyase-like superfamily protein [Theob... 57 3e-06
ref|XP_007028787.1| Polygalacturonase abscission zone A, putativ... 57 4e-06
ref|XP_006489947.1| PREDICTED: polygalacturonase-like [Citrus si... 56 6e-06
>ref|XP_006838303.1| hypothetical protein AMTR_s00103p00121270 [Amborella trichopoda]
gi|548840771|gb|ERN00872.1| hypothetical protein
AMTR_s00103p00121270 [Amborella trichopoda]
Length = 463
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/97 (47%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Frame = +3
Query: 261 CSGSL----QDPLXXXXXXXXXXXXXAYPTYIGIIEKQKSEFEPNVLSMFEYEEQGLNLE 428
CS S +DPL AYP Y G I +++SE + + + F YE + E
Sbjct: 22 CSSSYCVFHEDPLPDCLEEDPGYDTSAYPVYYGAILERESESKFDSEN-FGYEPEFFTTE 80
Query: 429 RFDEVGSPGSSVKVVNVDDFGAKGDGTDDTEAFKDAW 539
R+D VGSP +S+KVV+VDDFGAKGDGTDDT+AF +AW
Sbjct: 81 RYDRVGSPEASLKVVSVDDFGAKGDGTDDTQAFAEAW 117
>ref|XP_003633562.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 481
Score = 75.5 bits (184), Expect = 8e-12
Identities = 38/74 (51%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 AYPTYIGIIEKQKS-EFEPNVLSM-FEYEEQGLNLERFDEVGSPGSSVKVVNVDDFGAKG 500
AYP + G I+K ++ +FE + ++ EYE + ++ R+D++G+P +S+ VNVDDFGAKG
Sbjct: 57 AYPPFFGTIDKDRAVDFEASFANLQMEYEAEIVDSTRYDQLGTPATSLGEVNVDDFGAKG 116
Query: 501 DG-TDDTEAFKDAW 539
DG TDDTEAFK AW
Sbjct: 117 DGVTDDTEAFKTAW 130
>emb|CBI24903.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 75.5 bits (184), Expect = 8e-12
Identities = 38/74 (51%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 AYPTYIGIIEKQKS-EFEPNVLSM-FEYEEQGLNLERFDEVGSPGSSVKVVNVDDFGAKG 500
AYP + G I+K ++ +FE + ++ EYE + ++ R+D++G+P +S+ VNVDDFGAKG
Sbjct: 38 AYPPFFGTIDKDRAVDFEASFANLQMEYEAEIVDSTRYDQLGTPATSLGEVNVDDFGAKG 97
Query: 501 DG-TDDTEAFKDAW 539
DG TDDTEAFK AW
Sbjct: 98 DGVTDDTEAFKTAW 111
>emb|CAN78059.1| hypothetical protein VITISV_006092 [Vitis vinifera]
Length = 422
Score = 75.5 bits (184), Expect = 8e-12
Identities = 38/74 (51%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 AYPTYIGIIEKQKS-EFEPNVLSM-FEYEEQGLNLERFDEVGSPGSSVKVVNVDDFGAKG 500
AYP + G I+K ++ +FE + ++ EYE + ++ R+D++G+P +S+ VNVDDFGAKG
Sbjct: 41 AYPPFFGTIDKDRAVDFEASFANLQMEYEAEIVDSTRYDQLGTPATSLGEVNVDDFGAKG 100
Query: 501 DG-TDDTEAFKDAW 539
DG TDDTEAFK AW
Sbjct: 101 DGVTDDTEAFKTAW 114
>sp|Q02096.1|PGLR_PERAE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor gi|22631|emb|CAA47055.1|
polygalacturonase [Persea americana]
Length = 462
Score = 72.8 bits (177), Expect = 5e-11
Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Frame = +3
Query: 204 MGICKYLPPLLMLWSFTCPCSGSLQ-DPLXXXXXXXXXXXXXAYPTYIGIIEKQKSE--- 371
M + + L P+ +LW LQ DPL AYPTY G I + S
Sbjct: 1 MALTRLLLPISILWFCFYSSHTILQKDPLLICVNGDPGFDQRAYPTYFGPILDEFSSIMG 60
Query: 372 FEPNVLSMFEYEEQGLNLERFDEVGSPGSSVKV-VNVDDFGAKGDGTDDTEAFKDAW 539
FEP++LS LERF+ VG P +S ++VDDFGA+GDGTDDT+AF+ AW
Sbjct: 61 FEPSILS----------LERFNPVGGPETSPDTDISVDDFGARGDGTDDTKAFEKAW 107
>gb|AAA32914.1| polygalacturonase [Persea americana]
Length = 453
Score = 72.8 bits (177), Expect = 5e-11
Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Frame = +3
Query: 204 MGICKYLPPLLMLWSFTCPCSGSLQ-DPLXXXXXXXXXXXXXAYPTYIGIIEKQKSE--- 371
M + + L P+ +LW LQ DPL AYPTY G I + S
Sbjct: 1 MALTRLLLPISILWFCFYSSHTILQKDPLLICVNGDPGFDQRAYPTYFGPILDEFSSIMG 60
Query: 372 FEPNVLSMFEYEEQGLNLERFDEVGSPGSSVKV-VNVDDFGAKGDGTDDTEAFKDAW 539
FEP++LS LERF+ VG P +S ++VDDFGA+GDGTDDT+AF+ AW
Sbjct: 61 FEPSILS----------LERFNPVGGPETSPDTDISVDDFGARGDGTDDTKAFEKAW 107
>ref|XP_003633582.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 418
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Frame = +3
Query: 261 CSGSLQD-PLXXXXXXXXXXXXXAYPTYIGIIEKQKSE-FEPNVLSM-FEYEEQGLNLER 431
CS S QD PL AYP++ G ++K +++ F + ++ EYE + + R
Sbjct: 20 CSSSFQDDPLGNFLEQTPGYDPSAYPSFFGTVDKDRADDFGVSFTNLQMEYEPEIVESMR 79
Query: 432 FDEVGSPGSSVKVVNVDDFGAKGDG-TDDTEAFKDAW 539
+D +G+P +S VNV++FGA+GDG TDDTEAFK AW
Sbjct: 80 YDHLGTPATSQGEVNVENFGAEGDGETDDTEAFKKAW 116
>emb|CBI24904.3| unnamed protein product [Vitis vinifera]
Length = 456
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = +3
Query: 246 SFTCPCSGSLQD-PLXXXXXXXXXXXXXAYPTYIGIIEKQKSE-FEPNVLSM-FEYEEQG 416
S C S QD PL AYP++ G I +++ FE ++ EYE +
Sbjct: 9 SCRCYLSNDFQDDPLANFLDQAPGYDPSAYPSFFGTIHDDRNDDFEERFANLKMEYEPEI 68
Query: 417 LNLERFDEVGSPGSSVKVVNVDDFGAKGDG-TDDTEAFKDAW 539
++ R+D++G+P + + VNVDD+GA+GDG TDDTEAFK AW
Sbjct: 69 IDSMRYDQLGTPATLLGEVNVDDYGAEGDGITDDTEAFKKAW 110
>ref|XP_002274775.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 449
Score = 69.3 bits (168), Expect = 6e-10
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = +3
Query: 279 DPLXXXXXXXXXXXXXAYPTYIGIIEKQKSE-FEPNVLSM-FEYEEQGLNLERFDEVGSP 452
DPL AYP++ G I +++ FE ++ EYE + ++ R+D++G+P
Sbjct: 14 DPLANFLDQAPGYDPSAYPSFFGTIHDDRNDDFEERFANLKMEYEPEIIDSMRYDQLGTP 73
Query: 453 GSSVKVVNVDDFGAKGDG-TDDTEAFKDAW 539
+ + VNVDD+GA+GDG TDDTEAFK AW
Sbjct: 74 ATLLGEVNVDDYGAEGDGITDDTEAFKKAW 103
>emb|CBI24900.3| unnamed protein product [Vitis vinifera]
Length = 317
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Frame = +3
Query: 261 CSGSLQDPLXXXXXXXXXXXXXAYPTYIGIIEKQKSE-FEPNVLSM-FEYEEQGLNLERF 434
C DPL AYP++ G ++K +++ F + ++ EYE + + R+
Sbjct: 13 CRNFQDDPLGNFLEQTPGYDPSAYPSFFGTVDKDRADDFGVSFTNLQMEYEPEIVESMRY 72
Query: 435 DEVGSPGSSVKVVNVDDFGAKGDG-TDDTEAFKDAW 539
D +G+P +S VNV++FGA+GDG TDDTEAFK AW
Sbjct: 73 DHLGTPATSQGEVNVENFGAEGDGETDDTEAFKKAW 108
>ref|XP_002313308.2| hypothetical protein POPTR_0009s06520g, partial [Populus
trichocarpa] gi|550331172|gb|EEE87263.2| hypothetical
protein POPTR_0009s06520g, partial [Populus trichocarpa]
Length = 436
Score = 62.0 bits (149), Expect = 9e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +3
Query: 330 YPTYIGIIEKQKSEFEPNVLSMFEYEEQGLNLERFDEVGSPGSSVKVVNVDDFGAKGDGT 509
Y Y I+++ ++ + + +E + + R D+ +P SS KVVNVDDFGAK DGT
Sbjct: 24 YRPYFSTIDRKDNDLKHIFPRLLNFEAKVV--ARLDQASAPVSSAKVVNVDDFGAKADGT 81
Query: 510 DDTEAFKDAW 539
DD++AFK AW
Sbjct: 82 DDSQAFKKAW 91
>ref|XP_002529616.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223530901|gb|EEF32761.1| Polygalacturonase precursor,
putative [Ricinus communis]
Length = 474
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = +3
Query: 327 AYPTYIGIIEKQKSEFEPNVLSMFEYEEQGLNLERFDEVGSPGSSVKVVNVDDFGAKGDG 506
AYP+Y I+ +S E +L L+L FD+VG+ +S K +VD FGAK DG
Sbjct: 64 AYPSYFSSIDDGQSNNEDLILMRANV----LDLNIFDKVGTTSTSAKTFSVDAFGAKADG 119
Query: 507 TDDTEAFKDAW 539
+DDT+AF++AW
Sbjct: 120 SDDTKAFQEAW 130
>ref|XP_007028788.1| Pectin lyase-like superfamily protein [Theobroma cacao]
gi|508717393|gb|EOY09290.1| Pectin lyase-like
superfamily protein [Theobroma cacao]
Length = 454
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 327 AYPTYIGIIEKQKSEFEPNVLSMFEYEEQGLNLERFDEVGS-PGSSVKVVNVDDFGAKGD 503
AYP+Y+ +E EF+ + E L+L R EV +S K VNVDDFGA GD
Sbjct: 45 AYPSYVSTLED--GEFKDLIRPSAEV----LSLSRLGEVDIITSTSTKTVNVDDFGATGD 98
Query: 504 GTDDTEAFKDAW 539
G DDT+AF++AW
Sbjct: 99 GDDDTQAFEEAW 110
>ref|XP_007028787.1| Polygalacturonase abscission zone A, putative [Theobroma cacao]
gi|508717392|gb|EOY09289.1| Polygalacturonase abscission
zone A, putative [Theobroma cacao]
Length = 460
Score = 56.6 bits (135), Expect = 4e-06
Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Frame = +3
Query: 327 AYPTYIGIIEKQKSEFEPNVLSMFEYEEQGLNLERFDEVGS---------PGSSV-KVVN 476
A P+Y I K + F+ Q L L RFD+ G PG K V+
Sbjct: 33 ASPSYFSSIWNGKFK------GFFKQTTQDLTLHRFDDDGDENYPSLPAGPGRPASKTVS 86
Query: 477 VDDFGAKGDGTDDTEAFKDAW 539
VDDFGAKGDG+DDTEAFK AW
Sbjct: 87 VDDFGAKGDGSDDTEAFKKAW 107
>ref|XP_006489947.1| PREDICTED: polygalacturonase-like [Citrus sinensis]
Length = 467
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = +3
Query: 327 AYPTYIGIIEKQKSEFEPNVLSMFEYEEQGLNLERFDEVGSPGSSVKVVNVDDFGAKGDG 506
AYP+Y+ IE KS+ + + Q NL+ VG K VNVDDFGAK DG
Sbjct: 54 AYPSYLSSIEDGKSK------DLIKQRTQIFNLKN---VGGFSKRGKTVNVDDFGAKADG 104
Query: 507 TDDTEAFKDAW 539
TDD++AF AW
Sbjct: 105 TDDSKAFMQAW 115