BLASTX nr result
ID: Cocculus23_contig00006667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00006667
(352 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853442.1| hypothetical protein AMTR_s00032p00179900 [A... 85 1e-14
gb|EXC24764.1| Cytochrome c6 [Morus notabilis] 84 3e-14
ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof... 80 4e-13
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof... 80 4e-13
emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] 80 4e-13
ref|XP_007024929.1| Cytochrome c [Theobroma cacao] gi|508780295|... 79 5e-13
ref|XP_007212230.1| hypothetical protein PRUPE_ppa013384mg [Prun... 77 3e-12
ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like... 75 7e-12
ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like... 75 7e-12
ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like... 75 7e-12
ref|XP_006448718.1| hypothetical protein CICLE_v10017084mg [Citr... 75 1e-11
ref|XP_004293752.1| PREDICTED: cytochrome c6, chloroplastic-like... 74 2e-11
ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana] gi|2780545... 74 3e-11
ref|XP_006374698.1| hypothetical protein POPTR_0015s15410g [Popu... 74 3e-11
dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana] 74 3e-11
ref|XP_002865286.1| electron transporter protein [Arabidopsis ly... 74 3e-11
pdb|2DGE|A Chain A, Crystal Structure Of Oxidized Cytochrome C6a... 74 3e-11
ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyr... 73 5e-11
ref|XP_006582859.1| PREDICTED: uncharacterized protein LOC100500... 72 8e-11
ref|XP_007157788.1| hypothetical protein PHAVU_002G098700g [Phas... 72 8e-11
>ref|XP_006853442.1| hypothetical protein AMTR_s00032p00179900 [Amborella trichopoda]
gi|548857095|gb|ERN14909.1| hypothetical protein
AMTR_s00032p00179900 [Amborella trichopoda]
Length = 200
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/117 (39%), Positives = 62/117 (52%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
+ +GAALF+KACIGCHDGGGN +QPVS + +++ + + + ++L GAT
Sbjct: 67 EVHKGAALFQKACIGCHDGGGNFLQPVSSYTPQCNFILFLELSMLLYCCSSLMWLFQGAT 126
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDLQ RNGV E++IY +TYYG GRMP
Sbjct: 127 LFTKDLQ----------------------------RNGVATEDDIYNLTYYGKGRMP 155
>gb|EXC24764.1| Cytochrome c6 [Morus notabilis]
Length = 198
Score = 83.6 bits (205), Expect = 3e-14
Identities = 50/117 (42%), Positives = 55/117 (47%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA+LFRKACIGCHDGGGNIIQP GAT
Sbjct: 95 DVQRGASLFRKACIGCHDGGGNIIQP-------------------------------GAT 123
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNG++ EEEIYR+TY+G GRMP
Sbjct: 124 LFLKDLQ----------------------------RNGIDSEEEIYRVTYFGKGRMP 152
>ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
Length = 167
Score = 79.7 bits (195), Expect = 4e-13
Identities = 50/117 (42%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGAALF +ACIGCHD GGNIIQP GAT
Sbjct: 64 DIQRGAALFGRACIGCHDAGGNIIQP-------------------------------GAT 92
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNGV+ EEEIYR+TYYG GRMP
Sbjct: 93 LFLKDLQ----------------------------RNGVDTEEEIYRVTYYGKGRMP 121
>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
gi|297737964|emb|CBI27165.3| unnamed protein product
[Vitis vinifera]
Length = 173
Score = 79.7 bits (195), Expect = 4e-13
Identities = 50/117 (42%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGAALF +ACIGCHD GGNIIQP GAT
Sbjct: 70 DIQRGAALFGRACIGCHDAGGNIIQP-------------------------------GAT 98
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNGV+ EEEIYR+TYYG GRMP
Sbjct: 99 LFLKDLQ----------------------------RNGVDTEEEIYRVTYYGKGRMP 127
>emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
Length = 125
Score = 79.7 bits (195), Expect = 4e-13
Identities = 50/117 (42%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGAALF +ACIGCHD GGNIIQP GAT
Sbjct: 22 DIQRGAALFGRACIGCHDAGGNIIQP-------------------------------GAT 50
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNGV+ EEEIYR+TYYG GRMP
Sbjct: 51 LFLKDLQ----------------------------RNGVDTEEEIYRVTYYGKGRMP 79
>ref|XP_007024929.1| Cytochrome c [Theobroma cacao] gi|508780295|gb|EOY27551.1|
Cytochrome c [Theobroma cacao]
Length = 172
Score = 79.3 bits (194), Expect = 5e-13
Identities = 49/117 (41%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA LFR+ACIGCHDGGGNIIQP GAT
Sbjct: 69 DIQRGATLFRQACIGCHDGGGNIIQP-------------------------------GAT 97
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDLQ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 98 LFTKDLQ----------------------------RNGVDTEEEIYRVTYFGKGRMP 126
>ref|XP_007212230.1| hypothetical protein PRUPE_ppa013384mg [Prunus persica]
gi|462408095|gb|EMJ13429.1| hypothetical protein
PRUPE_ppa013384mg [Prunus persica]
Length = 126
Score = 76.6 bits (187), Expect = 3e-12
Identities = 47/117 (40%), Positives = 52/117 (44%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D Q+GAALFRK CIGCHD GGNIIQP GAT
Sbjct: 23 DVQKGAALFRKTCIGCHDAGGNIIQP-------------------------------GAT 51
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF +DLQ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 52 LFTRDLQ----------------------------RNGVDTEEEIYRVTYFGKGRMP 80
>ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like [Citrus sinensis]
gi|568868385|ref|XP_006487480.1| PREDICTED: cytochrome
c6, chloroplastic-like [Citrus sinensis]
Length = 172
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/117 (38%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D Q+G +LFR+ACIGCHDGGGN+IQP GAT
Sbjct: 69 DIQKGVSLFRQACIGCHDGGGNVIQP-------------------------------GAT 97
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNGV+ E+EIY +TY+G GRMP
Sbjct: 98 LFLKDLQ----------------------------RNGVDTEDEIYHVTYFGKGRMP 126
>ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X2 [Citrus
sinensis]
Length = 147
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/117 (38%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D Q+G +LFR+ACIGCHDGGGN+IQP GAT
Sbjct: 44 DIQKGVSLFRQACIGCHDGGGNVIQP-------------------------------GAT 72
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNGV+ E+EIY +TY+G GRMP
Sbjct: 73 LFLKDLQ----------------------------RNGVDTEDEIYHVTYFGKGRMP 101
>ref|XP_006468459.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X1 [Citrus
sinensis]
Length = 174
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/117 (38%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D Q+G +LFR+ACIGCHDGGGN+IQP GAT
Sbjct: 71 DIQKGVSLFRQACIGCHDGGGNVIQP-------------------------------GAT 99
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNGV+ E+EIY +TY+G GRMP
Sbjct: 100 LFLKDLQ----------------------------RNGVDTEDEIYHVTYFGKGRMP 128
>ref|XP_006448718.1| hypothetical protein CICLE_v10017084mg [Citrus clementina]
gi|557551329|gb|ESR61958.1| hypothetical protein
CICLE_v10017084mg [Citrus clementina]
Length = 147
Score = 75.1 bits (183), Expect = 1e-11
Identities = 45/117 (38%), Positives = 53/117 (45%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D Q+GA+LFR+ACIGCHDGGGN+IQP GA
Sbjct: 44 DIQKGASLFRQACIGCHDGGGNVIQP-------------------------------GAA 72
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LFLKDLQ RNGV+ E+EIY +TY+G GRMP
Sbjct: 73 LFLKDLQ----------------------------RNGVDTEDEIYHVTYFGKGRMP 101
>ref|XP_004293752.1| PREDICTED: cytochrome c6, chloroplastic-like [Fragaria vesca subsp.
vesca]
Length = 170
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/117 (40%), Positives = 51/117 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D Q+GAALFR CIGCHD GGNIIQP GAT
Sbjct: 68 DVQKGAALFRTTCIGCHDMGGNIIQP-------------------------------GAT 96
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDLQ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 97 LFTKDLQ----------------------------RNGVDTEEEIYRVTYFGKGRMP 125
>ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana]
gi|27805454|sp|Q93VA3.1|CYC6_ARATH RecName:
Full=Cytochrome c6, chloroplastic; AltName:
Full=Cytochrome c-552; Short=Atc6; AltName:
Full=Cytochrome c-553; AltName: Full=Cytochrome c553;
AltName: Full=Soluble cytochrome f; Flags: Precursor
gi|13926305|gb|AAK49619.1|AF372903_1 AT5g45040/K21C13_23
[Arabidopsis thaliana] gi|16323250|gb|AAL15359.1|
AT5g45040/K21C13_23 [Arabidopsis thaliana]
gi|19571824|emb|CAD27418.1| c6 type cytochrome
[Arabidopsis thaliana] gi|332007810|gb|AED95193.1|
cytochrome c6 [Arabidopsis thaliana]
Length = 175
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/117 (39%), Positives = 51/117 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA LF +ACIGCHD GGNIIQP GAT
Sbjct: 74 DIQRGATLFNRACIGCHDTGGNIIQP-------------------------------GAT 102
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDL+ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 103 LFTKDLE----------------------------RNGVDTEEEIYRVTYFGKGRMP 131
>ref|XP_006374698.1| hypothetical protein POPTR_0015s15410g [Populus trichocarpa]
gi|550322790|gb|ERP52495.1| hypothetical protein
POPTR_0015s15410g [Populus trichocarpa]
Length = 209
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/117 (39%), Positives = 51/117 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA+LF + CIGCHD GGNIIQP GAT
Sbjct: 106 DVQRGASLFSRTCIGCHDAGGNIIQP-------------------------------GAT 134
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDLQ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 135 LFTKDLQ----------------------------RNGVDTEEEIYRMTYFGKGRMP 163
>dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana]
Length = 151
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/117 (39%), Positives = 51/117 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA LF +ACIGCHD GGNIIQP GAT
Sbjct: 50 DIQRGATLFNRACIGCHDTGGNIIQP-------------------------------GAT 78
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDL+ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 79 LFTKDLE----------------------------RNGVDTEEEIYRVTYFGKGRMP 107
>ref|XP_002865286.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata]
gi|297311121|gb|EFH41545.1| electron transporter protein
[Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/117 (39%), Positives = 51/117 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA LF +ACIGCHD GGNIIQP GAT
Sbjct: 75 DIQRGATLFNRACIGCHDTGGNIIQP-------------------------------GAT 103
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDL+ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 104 LFTKDLE----------------------------RNGVDTEEEIYRVTYFGKGRMP 132
>pdb|2DGE|A Chain A, Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana gi|110591228|pdb|2DGE|B Chain B,
Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana gi|110591229|pdb|2DGE|C Chain C,
Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana gi|110591230|pdb|2DGE|D Chain D,
Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana
Length = 105
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/117 (39%), Positives = 51/117 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA LF +ACIGCHD GGNIIQP GAT
Sbjct: 4 DIQRGATLFNRACIGCHDTGGNIIQP-------------------------------GAT 32
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDL+ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 33 LFTKDLE----------------------------RNGVDTEEEIYRVTYFGKGRMP 61
>ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyrata]
gi|297309370|gb|EFH39794.1| cytochrome c6 [Arabidopsis
lyrata subsp. lyrata]
Length = 176
Score = 72.8 bits (177), Expect = 5e-11
Identities = 46/117 (39%), Positives = 51/117 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA LF +ACIGCHD GGNIIQPV AT
Sbjct: 75 DIQRGATLFNRACIGCHDTGGNIIQPV-------------------------------AT 103
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDL+ RNGV+ EEEIYR+TY+G GRMP
Sbjct: 104 LFTKDLE----------------------------RNGVDTEEEIYRVTYFGKGRMP 132
>ref|XP_006582859.1| PREDICTED: uncharacterized protein LOC100500456 isoform X1 [Glycine
max]
Length = 172
Score = 72.0 bits (175), Expect = 8e-11
Identities = 46/117 (39%), Positives = 49/117 (41%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRG LFR+ACIGCHD GGNIIQP GAT
Sbjct: 69 DIQRGTTLFRQACIGCHDAGGNIIQP-------------------------------GAT 97
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRMP 351
LF KDLQ RNGV+ EE IY +TYYG GRMP
Sbjct: 98 LFAKDLQ----------------------------RNGVDTEEAIYGVTYYGKGRMP 126
>ref|XP_007157788.1| hypothetical protein PHAVU_002G098700g [Phaseolus vulgaris]
gi|561031203|gb|ESW29782.1| hypothetical protein
PHAVU_002G098700g [Phaseolus vulgaris]
Length = 172
Score = 72.0 bits (175), Expect = 8e-11
Identities = 45/116 (38%), Positives = 50/116 (43%)
Frame = +1
Query: 1 DTQRGAALFRKACIGCHDGGGNIIQPVSVISTLQTHKIYVHILFIKLKFFTNLYLL*GAT 180
D QRGA LFR+ACIGCHD GGN+IQP G+T
Sbjct: 69 DIQRGATLFRQACIGCHDAGGNVIQP-------------------------------GST 97
Query: 181 LFLKDLQRYGNSYFKTRLPVQMGNLLTVGPILCLHRNGVEKEEEIYRITYYGNGRM 348
LF KDLQ RNGV+ EE IYR+TYYG GRM
Sbjct: 98 LFTKDLQ----------------------------RNGVDTEEAIYRVTYYGKGRM 125